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<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing with OASIS Tables v3.0 20080202//EN" "journalpub-oasis3.dtd">
<article xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:oasis="http://docs.oasis-open.org/ns/oasis-exchange/table" dtd-version="3.0">
  <front>
    <journal-meta>
<journal-id journal-id-type="publisher">AMT</journal-id>
<journal-title-group>
<journal-title>Atmospheric Measurement Techniques</journal-title>
<abbrev-journal-title abbrev-type="publisher">AMT</abbrev-journal-title>
<abbrev-journal-title abbrev-type="nlm-ta">Atmos. Meas. Tech.</abbrev-journal-title>
</journal-title-group>
<issn pub-type="epub">1867-8548</issn>
<publisher><publisher-name>Copernicus Publications</publisher-name>
<publisher-loc>Göttingen, Germany</publisher-loc>
</publisher>
</journal-meta>

    <article-meta>
      <article-id pub-id-type="doi">10.5194/amt-10-4165-2017</article-id><title-group><article-title>Line-averaging measurement methods to estimate the gap in the CO<inline-formula><mml:math id="M1" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
balance closure – possibilities, challenges, and uncertainties</article-title>
      </title-group><?xmltex \runningtitle{Line-averaging measurement methods}?><?xmltex \runningauthor{A. Ziemann et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Ziemann</surname><given-names>Astrid</given-names></name>
          <email>astrid.ziemann@tu-dresden.de</email>
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Starke</surname><given-names>Manuela</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Schütze</surname><given-names>Claudia</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>Chair of Meteorology, TU Dresden, 01062 Dresden, Germany</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Department for Monitoring and Exploration Technologies, Helmholtz
Centre for Environmental Research,<?xmltex \hack{\newline}?> 04318 Leipzig, Germany</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Astrid Ziemann (astrid.ziemann@tu-dresden.de)</corresp></author-notes><pub-date><day>7</day><month>November</month><year>2017</year></pub-date>
      
      <volume>10</volume>
      <issue>11</issue>
      <fpage>4165</fpage><lpage>4190</lpage>
      <history>
        <date date-type="received"><day>4</day><month>April</month><year>2017</year></date>
           <date date-type="rev-request"><day>1</day><month>June</month><year>2017</year></date>
           <date date-type="rev-recd"><day>20</day><month>September</month><year>2017</year></date>
           <date date-type="accepted"><day>25</day><month>September</month><year>2017</year></date>
      </history>
      <permissions>
<license license-type="open-access">
<license-p>This work is licensed under the Creative Commons Attribution 3.0 Unported License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/3.0/">https://creativecommons.org/licenses/by/3.0/</ext-link></license-p>
</license>
</permissions><self-uri xlink:href="https://amt.copernicus.org/articles/10/4165/2017/amt-10-4165-2017.html">This article is available from https://amt.copernicus.org/articles/10/4165/2017/amt-10-4165-2017.html</self-uri>
<self-uri xlink:href="https://amt.copernicus.org/articles/10/4165/2017/amt-10-4165-2017.pdf">The full text article is available as a PDF file from https://amt.copernicus.org/articles/10/4165/2017/amt-10-4165-2017.pdf</self-uri>


      <abstract>
    <p>An imbalance of surface energy fluxes using the eddy covariance (EC) method
is observed in global measurement networks although all necessary corrections
and conversions are applied to the raw data. Mainly during nighttime,
advection can occur, resulting in a closing gap that consequently should also
affect the CO<inline-formula><mml:math id="M2" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> balances. There is the crucial need for representative
concentration and wind data to measure advective fluxes. Ground-based remote
sensing techniques are an ideal tool as they provide the spatially
representative CO<inline-formula><mml:math id="M3" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration together with wind components within
the same voxel structure. For this purpose, the presented SQuAd (Spatially
resolved Quantification of the Advection influence on the balance closure of
greenhouse gases) approach applies an integrated method combination of
acoustic and optical remote sensing. The innovative combination of acoustic
travel-time tomography (A-TOM) and open-path Fourier-transform infrared
spectroscopy (OP-FTIR) will enable an upscaling and enhancement of EC
measurements. OP-FTIR instrumentation offers the significant advantage of
real-time simultaneous measurements of line-averaged concentrations for
CO<inline-formula><mml:math id="M4" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> and other greenhouse gases (GHGs). A-TOM is a scalable method to
remotely resolve 3-D wind and temperature fields. The paper will give an
overview about the proposed SQuAd approach and first results of experimental
tests at the FLUXNET site Grillenburg in Germany.</p>
    <p>Preliminary results of the comprehensive experiments reveal a mean nighttime
horizontal advection of CO<inline-formula><mml:math id="M5" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> of about
10 <inline-formula><mml:math id="M6" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol m<inline-formula><mml:math id="M7" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M8" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> estimated by the spatially integrating
and representative SQuAd method. Additionally, uncertainties in determining
CO<inline-formula><mml:math id="M9" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentrations using passive OP-FTIR and wind speed applying A-TOM
are systematically quantified. The maximum uncertainty for CO<inline-formula><mml:math id="M10" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
concentration was estimated due to environmental parameters, instrumental
characteristics, and retrieval procedure with a total amount of approximately
30 % for a single measurement. Instantaneous wind components can be
derived with a maximum uncertainty of 0.3 m s<inline-formula><mml:math id="M11" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> depending on sampling,
signal analysis, and environmental influences on sound propagation. Averaging
over a period of 30 min, the standard error of the mean values can be
decreased by a factor of at least 0.5 for OP-FTIR and 0.1 for A-TOM depending
on the required spatial resolution. The presented validation of the joint
application of the two independent, nonintrusive methods is in the focus of
attention concerning their ability to quantify advective fluxes.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <title>Introduction</title>
      <p>A closing gap for energy balance measurements which affects the balance
closure of greenhouse gases (GHGs), e.g., CO<inline-formula><mml:math id="M12" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>, is still observed at all
stations in global measuring networks (Marcolla et al., 2014). This imbalance
exists although all necessary corrections and calculations are applied to the
flow measurements using the eddy covariance (EC) method (e.g., Foken et al.,
2010; Mauder et al., 2006). Obviously, the existing measurement methods do
not capture all relevant transport mechanisms, especially during calm and
stable nighttime conditions. There has been a common agreement that EC
measurements tend to underestimate carbon fluxes in such situations (e.g.,
Moncrieff et al., 1997; Baldocchi et al., 2000; Paw U et al., 2000). In this
context, advection is an important mechanism. Advective fluxes can reach
significant values, especially at low-turbulence conditions (Aubinet et al.,
2003). Zeri et al. (2010) considered nighttime turbulent fluxes greater than
5 <inline-formula><mml:math id="M13" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol m<inline-formula><mml:math id="M14" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M15" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> as high values. This value is in
agreement with observations at other sites (Rebmann, 2004; Siebicke et
al., 2012). If the magnitude of vertical and/or horizontal advective CO<inline-formula><mml:math id="M16" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
fluxes is similar to those of other fluxes, e.g., turbulent fluxes, then the
advection influence on the carbon balance is important (Aubinet et al.,
2003).</p>
      <p>That effect causes an uncertainty in the crucial determination of the
CO<inline-formula><mml:math id="M17" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> mass balance of natural surfaces, e.g., forests. As a result, an almost
50 % reduction of the estimated potential of forests as a carbon sink is
possible (Siebicke et al., 2012). This uncertainty has an impact on the
confidence level of climatological forecast models and consequently on the
reliability of adaptation strategies to climate change (Richardson et al.,
2012). Thus, the measurement of advection remains an important issue for
accurate carbon sink or source estimates.</p>
      <p>The following simplified equation for CO<inline-formula><mml:math id="M18" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> mass conservation
(NEE, net ecosystem exchange) includes the mentioned advective fluxes
and is commonly used, for example, within FLUXNET (e.g., Feigenwinter et al., 2008):

              <disp-formula specific-use="align" content-type="numbered"><mml:math id="M19" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><?xmltex \hack{\hbox\bgroup\fontsize{9.5}{9.5}\selectfont$\displaystyle}?><mml:mtext mathvariant="normal">NEE</mml:mtext><mml:mspace width="0.125em" linebreak="nobreak"/><?xmltex \hack{$\egroup}?></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><?xmltex \hack{\hbox\bgroup\fontsize{9.5}{9.5}\selectfont$\displaystyle}?><mml:mo>=</mml:mo><mml:munderover><mml:mo movablelimits="false">∫</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mrow><mml:msub><mml:mi>z</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:munderover><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msub><mml:mi>V</mml:mi><mml:mi mathvariant="normal">m</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mrow><mml:mi>c</mml:mi><mml:mfenced open="(" close=")"><mml:mi>z</mml:mi></mml:mfenced></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mi mathvariant="normal">d</mml:mi><mml:mi>z</mml:mi><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msub><mml:mi>V</mml:mi><mml:mi mathvariant="normal">m</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>w</mml:mi><mml:mo>′</mml:mo></mml:msup><mml:msup><mml:mi>c</mml:mi><mml:mo>′</mml:mo></mml:msup><mml:mfenced open="(" close=")"><mml:msub><mml:mi>z</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mfenced></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:munderover><mml:mo movablelimits="false">∫</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mrow><mml:msub><mml:mi>z</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:munderover><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msub><mml:mi>V</mml:mi><mml:mi mathvariant="normal">m</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mover accent="true"><mml:mrow><mml:mi>w</mml:mi><mml:mfenced open="(" close=")"><mml:mi>z</mml:mi></mml:mfenced></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mrow><mml:mi>c</mml:mi><mml:mfenced close=")" open="("><mml:mi>z</mml:mi></mml:mfenced></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mi mathvariant="normal">d</mml:mi><mml:mi>z</mml:mi><?xmltex \hack{$\egroup}?></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="Ch1.E1"><mml:mtd/><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><?xmltex \hack{\hbox\bgroup\fontsize{9.5}{9.5}\selectfont$\displaystyle}?><mml:mo>+</mml:mo><mml:munderover><mml:mo movablelimits="false">∫</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mrow><mml:msub><mml:mi>z</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:munderover><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msub><mml:mi>V</mml:mi><mml:mi mathvariant="normal">m</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mfenced close=")" open="("><mml:mover accent="true"><mml:mrow><mml:mi>u</mml:mi><mml:mfenced open="(" close=")"><mml:mi>z</mml:mi></mml:mfenced></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mrow><mml:mi>c</mml:mi><mml:mfenced open="(" close=")"><mml:mi>z</mml:mi></mml:mfenced></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mover accent="true"><mml:mrow><mml:mi>v</mml:mi><mml:mfenced open="(" close=")"><mml:mi>z</mml:mi></mml:mfenced></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mrow><mml:mi>c</mml:mi><mml:mfenced open="(" close=")"><mml:mi>z</mml:mi></mml:mfenced></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mi mathvariant="normal">d</mml:mi><mml:mi>z</mml:mi><?xmltex \hack{$\egroup}?><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

          with <inline-formula><mml:math id="M20" display="inline"><mml:mrow><mml:msub><mml:mi>V</mml:mi><mml:mi mathvariant="normal">m</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> as the molar volume of dry air; <inline-formula><mml:math id="M21" display="inline"><mml:mi>c</mml:mi></mml:math></inline-formula> as the CO<inline-formula><mml:math id="M22" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> molar
fraction (<inline-formula><mml:math id="M23" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol mol<inline-formula><mml:math id="M24" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>; <inline-formula><mml:math id="M25" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula> as the time; and <inline-formula><mml:math id="M26" display="inline"><mml:mi>u</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M27" display="inline"><mml:mi>v</mml:mi></mml:math></inline-formula>, and <inline-formula><mml:math id="M28" display="inline"><mml:mi>w</mml:mi></mml:math></inline-formula> as
the wind velocity components in <inline-formula><mml:math id="M29" display="inline"><mml:mi>x</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M30" display="inline"><mml:mi>y</mml:mi></mml:math></inline-formula>, and <inline-formula><mml:math id="M31" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> directions, respectively.
Overbars indicate Reynolds averaging, typically over a time of 30 min.</p>
      <p>The first term on the right-hand side describes the rate of change in storage
of CO<inline-formula><mml:math id="M32" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>. The second term refers to the turbulent vertical flux which is
usually measured as EC flux at the reference height <inline-formula><mml:math id="M33" display="inline"><mml:mrow><mml:msub><mml:mi>z</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> above ground
surface. The third and fourth terms are the nonturbulent vertical and horizontal
advection terms, respectively. In practice, finite differences are used to
approximate the spatial derivatives in Eq. (1). The horizontal advection at a
reference height is simplified to
          <disp-formula id="Ch1.E2" content-type="numbered"><mml:math id="M34" display="block"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mi mathvariant="normal">Hor</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msub><mml:mi>V</mml:mi><mml:mi mathvariant="normal">m</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mfenced close=")" open="("><mml:mover accent="true"><mml:mi>u</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mover accent="true"><mml:mi>c</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mover accent="true"><mml:mi>v</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mover accent="true"><mml:mi>c</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>y</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>z</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
        where the wind components and horizontal concentration gradients are
representative for a specific height layer <inline-formula><mml:math id="M35" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>z</mml:mi></mml:mrow></mml:math></inline-formula>.</p>
      <p>An equivalent equation could be derived for the vertical advection.</p>
      <p>Advection is a significant error source applying the EC method mainly in complex
terrain or in areas with land use changes (Aubinet, 2008). Marcolla et
al. (2014) measured within the ADVEX advection experiment situations dominated by a
local slope wind system. The authors observed positive horizontal and
vertical advection (typical values around 7 and
3 <inline-formula><mml:math id="M36" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol m<inline-formula><mml:math id="M37" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M38" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, respectively) in coincidence with
downslope winds at night. Otherwise, slightly negative horizontal advection
(typical values around <inline-formula><mml:math id="M39" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>2 <inline-formula><mml:math id="M40" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol m<inline-formula><mml:math id="M41" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M42" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> concurred
with upslope winds during the day. Taking such advective fluxes into account,
a significant reduction of the reported annual CO<inline-formula><mml:math id="M43" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> uptake of forests
might be a feasible consequence (e.g., at the Renon/Ritten site, Feigenwinter
et al., 2010).</p>
      <p>A typical daily pattern of advection was described by several authors:
advection is maximal after sunset, when higher gradients of CO<inline-formula><mml:math id="M44" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
concentration are expected to occur with the onset of stable stratification
(e.g., Kutsch et al., 2008). Siebicke et al. (2012) found an additional
second maximum for stable stratification and low air temperature due to
radiative cooling at the end of the night. Sun et al. (2007) also reported
significant horizontal CO<inline-formula><mml:math id="M45" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> advection during transition periods in the
early evening and early morning when turbulence intensity is low.</p>
      <p>Experimental investigation of the advective CO<inline-formula><mml:math id="M46" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> fluxes started in the
late 1990s (Lee, 1998). Several recent studies tried to quantify the
effect of advection in the near surroundings of flux tower sites (e.g.,
Siebicke et al., 2012; Marcolla et al., 2014). The studies varied from 2-D
configurations (e.g., Aubinet et al., 2003) to more sophisticated 3-D
experimental designs (e.g., Feigenwinter et al., 2008). Advection
measurements are mostly affected by large uncertainties (Rebmann et al.,
2010). A big challenge is the accurate measurement of horizontal
concentration gradients which are often small in relation to the measurement
uncertainty (Heinesch et al., 2007). Additionally, a synchronous observation
of horizontal gradients is not possible if several measurement points are
sequentially sampled. Because of the limited spatial resolution of
observations, the spatial CO<inline-formula><mml:math id="M47" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration as well as the flow field is
systematically undersampled (Aubinet et al., 2010). This common limitation
of point-based gradient measurements leads to an inadequate spatial and
temporal sampling of the underlying phenomena (Marcolla et al., 2014).</p>
      <p>Furthermore, advection is most likely a scale-overlapping process
(Feigenwinter et al., 2010). The lack of knowledge of the variability in
scalar gradients in space and time has been identified as one of the most
likely reasons inhibiting significant progress in solving the nighttime
problem of underestimating carbon dioxide emissions from forested sites
(Aubinet et al., 2010; Thomas, 2011). Marcolla et al. (2014) explained that
the uncertainty due to the sampling in time and space with classical single
point measurements can be two magnitudes larger at low measurement levels
(i.e., at 0.5 m) in comparison to the instrumental uncertainty. The higher
number of sample points in time and space results in a better temporal and
spatial averaging and reduces the impact of local effects (e.g.,
heterogeneous vegetation structure) on the 30 min averages derived by
Siebicke et al. (2012). Horizontal and vertical resolutions of measurements
as well as the size of the control volume are two crucial points for the
experimental setup of actual sensor networks with multiple point measurements
(Feigenwinter et al., 2010).</p>
      <p>Another possibility to provide an adapted data sampling in space and time
is the use of line-integrating measurement methods, which are generally able to
determine the required quantities of CO<inline-formula><mml:math id="M48" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> advection. As one of the first
examples, Leuning et al. (2008) used perforated tubing at several levels to
perform line-integrated concentration measurements. However, the combination of
line-integrated concentration measurements with adequate and spatially
representative measurements of wind components remained challenging
(Siebicke et al., 2012).</p>
      <p>Consequently, the main objective of the current study is to develop and apply
an adapted line-averaging method to measure wind components using acoustic
tomography (A-TOM) and CO<inline-formula><mml:math id="M49" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentrations applying open-path
Fourier-transform infrared spectroscopy (OP-FTIR). These methods are introduced in
Sect. 2. The innovative combination of ground-based remote sensing methods
was applied within the SQuAd project (Spatially resolved Quantification of
the Advection influence on the balance closure of greenhouse gases) to
quantify the distribution of CO<inline-formula><mml:math id="M50" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentrations and wind vectors in a
consistent spatiotemporal resolution applying a special setup and analysis
procedures (Sect. 3). A central point for further applications is the
estimation of uncertainties of the proposed measurement and analysis methods
including temporal and spatial resolution (Sect. 4). First results of
nighttime measurements of horizontal advection over a grassland site are
discussed and compared with typical values of other studies (Sects. 4, 5).
Further developments and applications of the presented method combination are
proposed in Sect. 5.</p>
</sec>
<sec id="Ch1.S2">
  <title>Line-averaging measurement and analysis methods</title>
<sec id="Ch1.S2.SS1">
  <title>Acoustic travel-time tomography A-TOM</title>
      <p>Acoustic travel-time tomography is a ground-based remote sensing technique
that uses the dependence of sound speed in air on wind velocity and
temperature along the sound path (Wilson and Thomson, 1994). As a result,
approximations are commonly applied to represent the sound speed in a moving
medium considering an effective, motionless medium. The most common of these
assumptions is the effective sound speed approximation (Rayleigh, 1945;
Ostashev and Wilson, 2016):
<?xmltex \hack{\allowdisplaybreaks}?>

                <disp-formula specific-use="align" content-type="numbered"><mml:math id="M51" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E3"><mml:mtd/><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">eff</mml:mi></mml:msub><mml:mfenced open="(" close=")"><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">v</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mfenced><mml:mo>=</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">L</mml:mi></mml:msub><mml:mfenced close=")" open="("><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub></mml:mfenced><mml:mo>+</mml:mo><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>⋅</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">v</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mtext>with</mml:mtext></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E4"><mml:mtd/><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">L</mml:mi></mml:msub><mml:mfenced open="(" close=")"><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub></mml:mfenced><mml:mo>=</mml:mo><mml:msqrt><mml:mrow><mml:msub><mml:mi mathvariant="italic">γ</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub><mml:msub><mml:mi>R</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub></mml:mrow></mml:msqrt><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

            Here, <inline-formula><mml:math id="M52" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the acoustic virtual temperature (sonic
temperature). In addition to air temperature, <inline-formula><mml:math id="M53" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> accounts for
effects of moisture on sound speed due to different molar masses of dry air
and water vapor (<inline-formula><mml:math id="M54" display="inline"><mml:mrow><mml:msub><mml:mi>R</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">287.05</mml:mn></mml:mrow></mml:math></inline-formula> J kg<inline-formula><mml:math id="M55" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> K<inline-formula><mml:math id="M56" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>: specific
gas constant of dry air) as well as their different ratios of specific heat
capacities for constant pressure and constant volume (<inline-formula><mml:math id="M57" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">γ</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.4</mml:mn></mml:mrow></mml:math></inline-formula>: ratio of specific heat capacities for dry air).
<inline-formula><mml:math id="M58" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">v</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the horizontal wind
velocity, <inline-formula><mml:math id="M59" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">L</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the sound speed for an adiabatic sound
propagation following Laplace (1816) depending on air temperature and air
moisture, and <inline-formula><mml:math id="M60" display="inline"><mml:mi mathvariant="bold-italic">s</mml:mi></mml:math></inline-formula> is the unit vector tangential to the sound ray path
between sound source and receiver. For sound propagation near the ground with
small elevation angles (Ostashev and Wilson, 2016), the effective sound speed
is often used in the following form:
            <disp-formula id="Ch1.E5" content-type="numbered"><mml:math id="M61" display="block"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">eff</mml:mi></mml:msub><mml:mfenced close=")" open="("><mml:msub><mml:mi>T</mml:mi><mml:mtext>av</mml:mtext></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>v</mml:mi><mml:mtext>h</mml:mtext></mml:msub></mml:mfenced><mml:mo>=</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mtext>L</mml:mtext></mml:msub><mml:mfenced close=")" open="("><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub></mml:mfenced><mml:mo>+</mml:mo><mml:msub><mml:mi>v</mml:mi><mml:mtext>h</mml:mtext></mml:msub><mml:mo>⋅</mml:mo><mml:mi>cos⁡</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">φ</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">L</mml:mi></mml:msub><mml:mfenced open="(" close=")"><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub></mml:mfenced><mml:mo>+</mml:mo><mml:msub><mml:mi>v</mml:mi><mml:mi mathvariant="normal">Ray</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where <inline-formula><mml:math id="M62" display="inline"><mml:mi mathvariant="italic">ϕ</mml:mi></mml:math></inline-formula> is the angle between the azimuthal direction of sound
propagation and the horizontal wind speed <inline-formula><mml:math id="M63" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">v</mml:mi><mml:mtext>h</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, and
<inline-formula><mml:math id="M64" display="inline"><mml:mrow><mml:msub><mml:mi>v</mml:mi><mml:mi mathvariant="normal">Ray</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the wind speed in the direction of sound propagation.</p>
      <p>Effective sound speed can be estimated from travel-time measurements:
            <disp-formula id="Ch1.E6" content-type="numbered"><mml:math id="M65" display="block"><mml:mrow><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>=</mml:mo><mml:munderover><mml:mo movablelimits="false">∫</mml:mo><mml:mrow><mml:msub><mml:mi>x</mml:mi><mml:mtext>S</mml:mtext></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>x</mml:mi><mml:mtext>R</mml:mtext></mml:msub></mml:mrow></mml:munderover><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">d</mml:mi><mml:mi>s</mml:mi></mml:mrow><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">eff</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where <inline-formula><mml:math id="M66" display="inline"><mml:mi mathvariant="italic">τ</mml:mi></mml:math></inline-formula> is the acoustic travel time of a signal propagating along a
sound path with distance elements d<inline-formula><mml:math id="M67" display="inline"><mml:mi>s</mml:mi></mml:math></inline-formula> between sound source at position
<inline-formula><mml:math id="M68" display="inline"><mml:mrow><mml:msub><mml:mi>x</mml:mi><mml:mtext>S</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> and receiver at <inline-formula><mml:math id="M69" display="inline"><mml:mrow><mml:msub><mml:mi>x</mml:mi><mml:mtext>R</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>. Travel-time measurements of
acoustic signals propagating along different paths through an air volume give
information on the spatial distribution of sound speed within the
investigated area. Exactly knowing positions of loudspeakers and microphones,
spatial distributions of flow and temperature fields can be reconstructed
by applying inverse algorithms (e.g., Ostashev et al., 2009). As a remote
sensing method, one advantage of acoustic travel-time tomography is its
ability to measure the meteorological quantities without disturbing the area
under investigation due to insertion of sensors. The scalable method enables
inertia-free measurements without influences of radiation on the sensor.
Furthermore, temperature and wind speed can be recorded simultaneously with
this measurement method (Vecherin et al., 2006).</p>
      <p>Acoustic tomography as a measurement and analysis method has been further
developed since the late 1990s (Ziemann et al., 1999; Arnold et al., 2001).
This method was used to monitor spatially resolved wind and temperature
fields for different environmental conditions, e.g., in rural (Ziemann et
al., 2002) or urban environments (Tetzlaff et al., 2002) with heterogeneous
surface properties (Raabe et al., 2005), as well as on different spatial
scales, from indoor wind tunnel length scales (Barth and Raabe, 2011; Barth
et al., 2007) up to outdoor areas with acoustic path lengths of several
hundreds of meters (Arnold et al., 2004). As a result, several inversion techniques were
developed and validated regarding their potential for special applications
(Fischer et al., 2012). First joint investigations using A-TOM and optical
spectrometers confirmed the suitability of combined line-integrating
measurements of GHG exchange between surface and atmosphere (Barth et al.,
2013; Schäfer et al., 2012).</p>
      <p>The performance of A-TOM in reconstructing wind and temperature fields mainly
depends on two factors (Ziemann et al., 2007):
<list list-type="order"><list-item><p>the accuracy of travel-time estimates, which is influenced by
the signal characteristics (e.g., frequency, kind of signal) and the method
of data analysis (correlation technique); and</p></list-item><list-item><p>the sound path length and
its uncertainty due to sound propagation effects, especially refraction and
reflection of sound waves, as well as positioning accuracy of sound sources
and receivers.</p></list-item></list></p>
      <p>Thus, the setup of the A-TOM measurements (e.g., positioning of loudspeakers
and microphones to optimize the signal-to-noise ratio, SNR) determines the
accuracy of the wind components for the calculation of advection. A detailed
treatment of uncertainties is given in Sect. 4.1.</p>
</sec>
<sec id="Ch1.S2.SS2">
  <title>Open-path Fourier-transform infrared (OP-FTIR) spectroscopy</title>
      <p>The open, unobstructed atmosphere can be described as a complex,
multicomponent system controlled by parameters such as wind, temperature
variation, rain, and pressure fluctuations. The driving parameters for the
infrared (IR) transmittance of the atmosphere are the presence and the
concentration of gas molecules and the length of the optical pathways. The
interactions between IR energy and molecules cause characteristic absorption
or emission lines in the measured spectra (Griffiths and de Haseth, 2007).
The concentration of gases along the optical pathway can be retrieved by
using the Beer–Lambert law. Open-path technology concepts are applied to
measure the absorption loss along an optical path in ambient air. For passive
measurements, changes in the main infrared atmospheric window with respect to
absorbing gases are recorded. For active systems, an IR beam is transmitted
through open, unobstructed atmosphere and the measurement obtained represents
an integrated gas concentration along the optical path – so-called “path-integrated concentration values – PIC” (DIN EN 15483, 2009). The
transmissivity of the atmosphere is more or less controlled by the presence
of the GHGs H<inline-formula><mml:math id="M70" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O and CO<inline-formula><mml:math id="M71" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>, which are responsible for absorbtion of most of the infrared energy in certain regions of the spectrum.
Nevertheless, three main spectral windows can be identified, which allow OP-FTIR measurements.
These windows are located in the wavenumber regions (<inline-formula><mml:math id="M72" display="inline"><mml:mrow><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> as follow: (1) 700–1300 cm<inline-formula><mml:math id="M73" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
(passive/active OP-FTIR), (2) 1900–2250 cm<inline-formula><mml:math id="M74" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, and
(3) 2400–3000 cm<inline-formula><mml:math id="M75" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (window 2 and 3 can only be used for active OP-FTIR;
Marshall et al., 1994).</p>
      <p>The wavenumber-dependent IR intensity after passing through an absorbing
sample <inline-formula><mml:math id="M76" display="inline"><mml:mrow><mml:mi>I</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> can be described by
            <disp-formula id="Ch1.E7" content-type="numbered"><mml:math id="M77" display="block"><mml:mrow><mml:mi>I</mml:mi><mml:mfenced close=")" open="("><mml:mi mathvariant="italic">ν</mml:mi></mml:mfenced><mml:mo>=</mml:mo><mml:msub><mml:mi>I</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mfenced close=")" open="("><mml:mi mathvariant="italic">ν</mml:mi></mml:mfenced><mml:mo>⋅</mml:mo><mml:mi mathvariant="normal">exp</mml:mi><mml:mfenced open="{" close="}"><mml:mo>-</mml:mo><mml:mi>t</mml:mi><mml:mfenced close=")" open="("><mml:mi mathvariant="italic">ν</mml:mi></mml:mfenced></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where <inline-formula><mml:math id="M78" display="inline"><mml:mrow><mml:msub><mml:mi>I</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is the IR intensity emitted from IR source and <inline-formula><mml:math id="M79" display="inline"><mml:mrow><mml:mi>t</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>
represents the optical depth, which is a sum function over all absorption lines
<inline-formula><mml:math id="M80" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> multiplied with concentration <inline-formula><mml:math id="M81" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (substance amount) of
the molecules <inline-formula><mml:math id="M82" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula> and the path length <inline-formula><mml:math id="M83" display="inline"><mml:mi>d</mml:mi></mml:math></inline-formula>:

                <disp-formula specific-use="align" content-type="numbered"><mml:math id="M84" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi>t</mml:mi><mml:mfenced close=")" open="("><mml:mi mathvariant="italic">ν</mml:mi></mml:mfenced></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>=</mml:mo><mml:mi>d</mml:mi><mml:mo>⋅</mml:mo><mml:munder><mml:mo movablelimits="false">∑</mml:mo><mml:mi>i</mml:mi></mml:munder><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mfenced open="(" close=")"><mml:mi mathvariant="italic">ν</mml:mi></mml:mfenced><mml:msub><mml:mi>c</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mi>d</mml:mi><mml:mo>⋅</mml:mo><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">T</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:mo>⋅</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">T</mml:mi></mml:msub></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="Ch1.E8"><mml:mtd/><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>+</mml:mo><mml:mi>d</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mo>⋅</mml:mo><mml:munder><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:munder><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub><mml:mfenced close=")" open="("><mml:mi mathvariant="italic">ν</mml:mi></mml:mfenced><mml:msub><mml:mi>c</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

            The optical depth <inline-formula><mml:math id="M85" display="inline"><mml:mrow><mml:mi>t</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> includes the absorption behavior of the target
molecule (<inline-formula><mml:math id="M86" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">T</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">T</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> as well as the influence of all
interfering atmospheric molecules along the measured optical path <inline-formula><mml:math id="M87" display="inline"><mml:mi>d</mml:mi></mml:math></inline-formula>.</p>
      <p>Hence, Eq. (7) can be written as

                <disp-formula specific-use="align" content-type="numbered"><mml:math id="M88" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi>I</mml:mi><mml:mfenced close=")" open="("><mml:mi mathvariant="italic">ν</mml:mi></mml:mfenced></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>=</mml:mo><mml:msub><mml:mi>I</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mfenced open="(" close=")"><mml:mi mathvariant="italic">ν</mml:mi></mml:mfenced><mml:mo>⋅</mml:mo><mml:mi mathvariant="normal">exp</mml:mi><mml:mfenced open="{" close="}"><mml:mo>-</mml:mo><mml:mi>d</mml:mi><mml:mo>⋅</mml:mo><mml:msub><mml:mo>∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub><mml:mfenced open="(" close=")"><mml:mi mathvariant="italic">ν</mml:mi></mml:mfenced><mml:msub><mml:mi>c</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>⋅</mml:mo><mml:mi mathvariant="normal">exp</mml:mi><mml:mfenced close="}" open="{"><mml:mo>-</mml:mo><mml:mi>d</mml:mi><mml:mo>⋅</mml:mo><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">T</mml:mi></mml:msub><mml:mfenced open="(" close=")"><mml:mi mathvariant="italic">ν</mml:mi></mml:mfenced><mml:mo>⋅</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">T</mml:mi></mml:msub></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="Ch1.E9"><mml:mtd/><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>=</mml:mo><mml:msubsup><mml:mi>I</mml:mi><mml:mn mathvariant="normal">0</mml:mn><mml:mo>∗</mml:mo></mml:msubsup><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:mo>⋅</mml:mo><mml:mi mathvariant="normal">exp</mml:mi><mml:mfenced open="{" close="}"><mml:mo>-</mml:mo><mml:mi>d</mml:mi><mml:mo>⋅</mml:mo><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">T</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:mo>⋅</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">T</mml:mi></mml:msub></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

            The expression <inline-formula><mml:math id="M89" display="inline"><mml:mrow><mml:msubsup><mml:mi>I</mml:mi><mml:mn mathvariant="normal">0</mml:mn><mml:mo>∗</mml:mo></mml:msubsup><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> represents the background spectrum
including absorption due to all disturbing molecules.</p>
      <p>OP-FTIR spectroscopy has proven to be a powerful technique enabling online
monitoring of fugitive emissions for industrial, environmental and health
applications (e.g., Harig and Matz, 2001; Griffith et al., 2002; DIN EN
15483, 2009). It allows spatial characterization of emissions and can be
applied noninvasively as an automated surveillance method in large and
potentially inaccessible areas (Schütze et al., 2015). Furthermore,
ground-based optical remote sensing methods like OP-FTIR are well suited to
study dynamic atmospheric processes due to their avoidance of any
disturbances upon emission and/or sampling processes (Reiche et al., 2014;
Schütze and Sauer, 2016). Several successful applications of active and
passive OP-FTIR are reported in terms of air quality monitoring, dynamic
atmospheric processes observations, and emission rate estimations in boundary
layer (e.g., Griffith et al., 2002; Allard et al., 2005; Schäfer et al.,
2012; Chen, 2015). The technique is often combined with other
micrometeorological investigations and provides information on several GHG
target gases, such as CO<inline-formula><mml:math id="M90" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>, CH<inline-formula><mml:math id="M91" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula>, NH<inline-formula><mml:math id="M92" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>, and N<inline-formula><mml:math id="M93" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O (Griffith et
al., 2012; Wilson and Flesch, 2016). Flesch et al. (2016) emphasize the
potential of combined micrometeorological and OP-FTIR measurements for
enhanced GHG emission determinations.</p>
      <p>The determined gas concentrations are based on the retrieval of
concentration values from measured IR spectra. The concentration value
obtained is associated with an uncertainty that characterizes the dispersion
due to random and systematic errors caused by the measurement and the data
processing procedures (Schütze and Sauer, 2016). Thus, instrumental
characteristics, applied infrared sources, environmental parameters, and
retrieval algorithms represent the main sources of uncertainty. The
assessment of uncertainties for these influencing factors relating to the
Grillenburg experiment will be discussed in Sect. 4.2.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><caption><p>Map of Grillenburg (middle): meadow in light green; Tharandt Forest
in dark green; area under investigation is marked by the blue rectangle (mygeo, 2017; openstreetmap, 2017; see references). Scheme of area
under investigation with location of several devices and auxiliary equipment:
ATOM1–4 (four masts for travel-time tomography A-TOM), dashed lines mark
acoustic paths; R72–73 (two Bruker RAPID passive OP-FTIRs); D1–2 and S1–2
(two Bruker EM27 active OP-FTIRs with source and detector); Young1–2 (two masts,
each equipped with two ultrasonic anemometers); Black1–5 (five black screens for
passive OP-FTIR); EC tower; SC (soil respiration chamber measurements).</p></caption>
          <?xmltex \igopts{width=327.206693pt}?><graphic xlink:href="https://amt.copernicus.org/articles/10/4165/2017/amt-10-4165-2017-f01.png"/>

        </fig>

</sec>
</sec>
<sec id="Ch1.S3">
  <title>Site, experimental setup, and data analysis</title>
<sec id="Ch1.S3.SS1">
  <title>Grassland EC site Grillenburg</title>
      <p>A joint experiment with A-TOM and OP-FTIR techniques as well as additional
measurement equipment was carried out within the SQuAd project at the EC
site Grillenburg. The grassland test site (380 m a.s.l.;
50<inline-formula><mml:math id="M94" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>57<inline-formula><mml:math id="M95" display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>04<inline-formula><mml:math id="M96" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>′</mml:mo><mml:mo>′</mml:mo></mml:mrow></mml:msup></mml:math></inline-formula> N, 13<inline-formula><mml:math id="M97" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>30<inline-formula><mml:math id="M98" display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula> 50<inline-formula><mml:math id="M99" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>′</mml:mo><mml:mo>′</mml:mo></mml:mrow></mml:msup></mml:math></inline-formula> E) is located in the
middle of a large clearing (40 ha area) within the Tharandt Forest, 30 km
away from Dresden in Germany (Fig. 1).</p>
      <p>An eddy flux tower was established there at a meadow which is extensively
managed with two to four hay harvests per year. The mesophytic hay meadow is
dominated by couch grass (<italic>Agropyron repens</italic>),
meadow foxtail
(<italic>Alopecurus pratensis</italic>), yarrow (<italic>Achillea millefolium</italic>),
common sorrel (<italic>Rumex acetosa</italic>), and white clover (<italic>Trifolium repens</italic>) (Prescher et al., 2010). Cows, sheep, or horses were rarely grazing
there. Neither mineral nor organic fertilizers have been applied at this site
since 1987. The permanent EC station is working within FLUXNET since 2002
(e.g., Hussain et al., 2011a) and meanwhile within the network ICOS-D.
Grillenburg is an atmospheric carbon sink (Prescher et al., 2010). However,
the NEE values show large interannual differences (e.g., from
<inline-formula><mml:math id="M100" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>177 g C m<inline-formula><mml:math id="M101" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in 2006 to <inline-formula><mml:math id="M102" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>62 g C m<inline-formula><mml:math id="M103" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in 2005). The mean net
ecosystem productivity (NEP) is about 80 gC m<inline-formula><mml:math id="M104" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> a<inline-formula><mml:math id="M105" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> since 2005.
After incorporation of carbon export due to harvest of hay, the permanent
grassland becomes a CO<inline-formula><mml:math id="M106" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> source of about 60 gC m<inline-formula><mml:math id="M107" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> a<inline-formula><mml:math id="M108" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
(ICOS-D Website, 2017).</p>
      <p>The EC station was equipped with the following measurement technique to
determine turbulent CO<inline-formula><mml:math id="M109" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> and H<inline-formula><mml:math id="M110" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O fluxes at a height of 3 m above
ground: ultrasonic anemometer GILL R3-50 (Gill Instruments, Lymington, UK)
and close-path measurements with IR gas analyzer (IRGA)
LI-7000 (LI-COR Biosciences,
Lincoln, NE, USA). Fluxes of CO<inline-formula><mml:math id="M111" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> (NEE), H<inline-formula><mml:math id="M112" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O (evapotranspiration),
and sensible heat are available on a half-hourly basis. Based on the general
EUROFLUX guidelines (Aubinet, 2000), Grünwald and Bernhofer (2007)
described the calculation and correction of the fluxes which are permanently
updated according to sensor and software development.</p>
      <p>Additionally, air temperature and air humidity, soil temperature and soil
heat flux, global and net radiation, and photosynthetically active radiation, as
well as precipitation and evaporation (Class A pan) are measured at the
station permanently.</p>
      <p>The nearby climate station has delivered data since 1862 and has been at the same
location since 1955. The annual mean temperature is 7.8 <inline-formula><mml:math id="M113" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C and the
annual mean precipitation is 901 mm (period 1981–2010).</p>
</sec>
<sec id="Ch1.S3.SS2">
  <title>Experimental setup in July 2016</title>
      <p>The special observation period (SOP) was carried out shortly after the
harvest of hay in Grillenburg from 8 until 18 July 2016. Two periods were of
special interest because of high solar radiation during the day (convective
boundary layer) and the building up of a stably stratified boundary layer
during nighttime: 9 until 11 and 15 until 18 July.</p>
      <p>On the 8th of July, shortly after the setup, the test site was affected by a
thunderstorm. Therefore, the measurements started on the next day. At this
time the area of investigation was influenced by a high ridge whose axis was
directed from north to south across the center of Germany on the 11th. In its
northern part the ridge was overrun by strong warm air advection due to an
upper air trough which traveled eastward towards Ireland. Within the
broad-based warm sector, very warm air masses from the southwest influenced
the experimental site especially on the 10th and 11th. The air mass was
potentially unstably layered but was also strongly capped due to the
low-tropospheric warm air advection. After this, the weather conditions
changed to rainy days due to a trough over central Europe which led to a
break in the measurements. On 15 July a high ridge from the Bay of Biscay to the
North Sea started to influence the weather conditions. Initially, fairly
moist and cool air reached the area with a north-westerly wind direction. The
following days were characterized by an intermediate high.</p>
      <p>In order to obtain statements on advection during the SOP, information on
spatially distributed CO<inline-formula><mml:math id="M114" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentrations was estimated from scanning
passive OP-FTIR devices. For continuous calibration, two active OP-FTIR
devices have been applied. A-TOM was configured in such a way that spatially
averaged wind velocities could be measured in two different heights above the
ground (1.5 m, 3.0 m). As reference for the line-averaged A-TOM
measurements, two masts which were equipped with two ultrasonic anemometers
(Young) at two heights (1.5 and 3.0 m) were arranged at the side of the
A-TOM measurement area (see Fig. 1).</p>
      <p>The total area under investigation, approximately 120 m <inline-formula><mml:math id="M115" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 120 m, is
marked in Fig. 1. All locations were measured using GPS and by a
high-precision theodolite (tachymeter).</p>
      <p>The acoustic measuring field was limited by the position of the acoustic
devices, which were mounted on telescopic masts at the corners of the field
(ATOM1–4). The height difference within the acoustic measuring field
(Fig. 1) was about 2.2 m, estimated from our own tachymeter measurements. The
terrain rises in the northern direction from the EC station (near ATOM1) to
the location of mast ATOM3. Between the masts equipped with ultrasonic
anemometers (Young1 and Young2, horizontal distance of 65 m), the difference
in terrain height is approximately 0.5 m.</p>
<sec id="Ch1.S3.SS2.SSS1">
  <title>Setup of wind measurements</title>
      <p>The A-TOM area inside this field extended to about 50 m <inline-formula><mml:math id="M116" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 50 m
(Fig. 1). For wind velocity estimation, a tested tomographic measurement
system was adapted to the proposed measurements at two height levels (1.5
and 3 m). Four high-end horn speakers with frequencies above 5 kHz (TL16H,
8 Ohm, Visaton) and four free-field pre-polarized microphone units (<inline-formula><mml:math id="M117" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:msup><mml:mn mathvariant="normal">2</mml:mn><mml:mrow><mml:mo>′</mml:mo><mml:mo>′</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>,
Type 4189-A-021, Brüel&amp;Kjær) with windscreens were built up at
telescopic masts with special booms at both heights above ground surface.
Thus, each mast was equipped with two loudspeakers and two microphones
(Fig. 2).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2"><caption><p><bold>(a)</bold> Telescopic mast (A-TOM2) with acoustic equipment at two
height levels, 1.5 and 3 m, above grassland, single tree line 220 m away,
and Tharandt Forest at a distance of 450 m in the background (southwest
direction). <bold>(b)</bold> Telescopic mast with ultrasonic anemometers at
1.5 m and 3 m height (Young2).</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://amt.copernicus.org/articles/10/4165/2017/amt-10-4165-2017-f02.jpg"/>

          </fig>

      <p>For typical sound speeds of 340 m s<inline-formula><mml:math id="M118" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> the maximum travel time for the
introduced A-TOM setup was 0.2 s due to the maximum length of sound paths
of about 70 m. The time interval between successive measurements (estimation
of travel-time data along all relevant sound paths) was 20 s due to the
duration of signal analysis and data storage of all 24 single measurements
(12 at each height level: i.e., back and forth between ATOM1–2, 1–4, 1–3, 2–3,
2–4, and 3–4; see Fig. 1).</p>
      <p>The described acoustic system can be enhanced in future experiments with
additional sound sources and receivers to increase the spatial resolution of
the measurements, which is especially desirable for the application of
tomographic data analysis.</p>
      <p>The four supplementary ultrasonic anemometers (YOUNG 81000V, R. M. Young
Company, Michigan, USA) were mounted side by side at a height of 2.26 m
above ground at the EC station Grillenburg for a period of 6 days
(10–16 June) shortly before the SOP. The obtained data were compared among
each other to guarantee that all devices measured the same value, which is a
requirement to calculate vertical or horizontal gradients with high accuracy.
Although all anemometers are of the same kind, series, and age, there are
differences in acoustic virtual temperature due to the special
characteristics of the individual instrument. One anemometer was used as
reference. Regressions between the temperature data of the reference and the
other devices were calculated. These equations were used during the SOP to
correct the measured temperature values of the ultrasonic anemometers. For
the wind velocity, which is the quantity of primary interest, such a correction was
not necessary.</p>
</sec>
<sec id="Ch1.S3.SS2.SSS2">
  <title>Setup concentration measurements</title>
      <p>Successful application of the nonintrusive methods A-TOM and OP-FTIR
requires agreement in the investigated air volume and the spatial resolution
of trace gas concentration and wind components. Thus, the OP-FTIR technique
was built up within and around the A-TOM array (Fig. 1).</p>
      <p>For our OP-FTIR investigations (Fig. 3) we used two Bruker EM27 systems
(Bruker Optik GmbH, Ettlingen, Germany) in bistatic operation mode including
NiCr glowers as field IR source for active measurements and two Bruker
RAPID
spectrometers (Bruker Daltonik GmbH, Leipzig, Germany) for passive
investigations. Both devices include narrow-band MCT (mercury cadmium
telluride) detectors. The instrumental parameters which characterize the devices are given in Table 1.</p>
      <p>A detailed description of equipment characteristics for both devices is
listed by Schütze and Sauer (2016).</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1"><caption><p>OP-FTIR spectrometer device parameters.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.90}[.90]?><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Instrumental parameter</oasis:entry>  
         <oasis:entry colname="col2">Bruker RAPID</oasis:entry>  
         <oasis:entry colname="col3">Bruker EM27</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>  
         <oasis:entry colname="col1">Modus</oasis:entry>  
         <oasis:entry colname="col2">Passive</oasis:entry>  
         <oasis:entry colname="col3">Active/passive</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">IR source</oasis:entry>  
         <oasis:entry colname="col2">Ambient</oasis:entry>  
         <oasis:entry colname="col3">NiCr glower at 1200 <inline-formula><mml:math id="M119" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Detector</oasis:entry>  
         <oasis:entry colname="col2">MCT</oasis:entry>  
         <oasis:entry colname="col3">MCT</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Resolution</oasis:entry>  
         <oasis:entry colname="col2">4 cm<inline-formula><mml:math id="M120" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col3">1 cm<inline-formula><mml:math id="M121" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Field of view (FOV)</oasis:entry>  
         <oasis:entry colname="col2">10 mrad</oasis:entry>  
         <oasis:entry colname="col3">10 mrad</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table></table-wrap>

      <p>The installation of the spectrometers and associated instruments (sources,
screens) was undertaken avoiding any influences on micrometeorological and
acoustic measurements. Furthermore, the optical pathways had to be aligned
without obstructions. The active OP-FTIR measurements were carried out on two
perpendicularly aligned optical paths situated in close vicinity to the A-TOM
equipment (Fig. 1). The two EM27 spectrometers (at a height of 0.9 m) and
their associated IR sources were installed obtaining optical path lengths of
52 and 64 m, respectively. The spectral measurements were carried out in
2 min sampling intervals including a co-addition of 20 spectra to improve
the signal-to-noise ratio.</p>
      <p>For passive measurements the two RAPID spectrometers were installed at the outer edges of
the field of investigation at a distance of 80 m from each other and at a
height of 0.9 m above ground. Five black background screens were used as
potential targets for the passive measurements. A complete measurement
consisted of 12 different single beam acquisitions with 6 different
horizontal directions per device aiming at an even distribution of optical
pathways inside the field of investigation. The sampling interval was
5.5 min. For each measurement an internal-temperature-controlled black body
within the spectrometer device was applied as a defined radiation source to
calibrate the instrument.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3"><caption><p>OP-FTIR spectrometer used for the SOP at the FLUXNET site Grillenburg.
<bold>(a)</bold> Passive Bruker RAPID spectrometer; <bold>(b)</bold> active Bruker EM27 detector
unit applied in bistatic mode with a separate IR source (not in figure).</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://amt.copernicus.org/articles/10/4165/2017/amt-10-4165-2017-f03.jpg"/>

          </fig>

      <p>In order to obtain information on ground surface CO<inline-formula><mml:math id="M122" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration and
soil emission, a LI-COR LI-8100A system including a multiplexer LI-8150 and two
long-term chambers were installed near the EC tower (Fig. 1). The chambers'
installation was done 1 day before the data acquisition started to avoid
any influences by disturbances due to the collar insertion. The obtained
CO<inline-formula><mml:math id="M123" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> data can be applied for the comparison with the spatially resolved
GHG concentrations. The soil chamber measurements were done in accordance
with the
ICOS protocol for automated chamber measurements (M. Pavelka and M. Acosta, personal communication, 2016).
We chose a sampling interval of two measurements per chamber per hour for the
data acquisition period. An observation length of 120 s was chosen for the
single soil flux measurements. Additionally, a pre-purge of 120 s and a
post-purge of 45 s for each flux measurement were selected. The initial
values of CO<inline-formula><mml:math id="M124" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration after the pre-purging and before the chamber
closing were taken from the measured time series of the observation period
for the determination of the considered CO<inline-formula><mml:math id="M125" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentrations at the
ground-level.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4" specific-use="star"><caption><p>Theoretical acoustic signal consisting of 2<inline-formula><mml:math id="M126" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula>2 sine periods
with a frequency of 7 kHz interrupted by a break. The sample rate of the
analogue-to-digital converter is 51.2 kHz.</p></caption>
            <?xmltex \igopts{width=369.885827pt}?><graphic xlink:href="https://amt.copernicus.org/articles/10/4165/2017/amt-10-4165-2017-f04.png"/>

          </fig>

<?xmltex \hack{\newpage}?>
</sec>
</sec>
<sec id="Ch1.S3.SS3">
  <title>Data analysis</title>
<sec id="Ch1.S3.SS3.SSS1">
  <title>Signal processing and analysis of acoustic travel-time
measurements</title>
      <p>The acoustic measurements are controlled by an in-house-developed software
(MATLAB) which comprises generation of sound signals, control of sound
transmission and reception, and subsequent real-time signal analysis.
The core hardware (analogue–digital conversion) is an acoustic multichannel
spectrometer card (Harmonie PCI octav, sample rate: 51.2 kHz; SINUS
Messtechnik GmbH, Germany) which offers eight input and four output channels that
are synchronized on a common time basis (Holstein et al., 2004; Barth and
Raabe, 2011). This, in turn, is a precondition for accurate travel-time
measurements.</p>
      <p>Acoustic signals with a frequency of 7 kHz and a special signature (sine
signal with 2 <inline-formula><mml:math id="M127" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 2 oscillations and a break between them, Fig. 4) are
used. The applied sound frequency is a compromise between the desired low
travel-time uncertainty and the necessary high SNR. In general, the
travel-time uncertainty is decreasing for increasing sound frequencies due to
the process of signal analysis. Furthermore, higher frequencies allow for a
high-pass filtering of received signals in order to exclude ambient
low-frequency noise from data analysis, which, in turn, enhances the SNR. However,
air absorption (see Sect. 4.1.1) is a limiting factor, which increases with
increasing frequencies and thus prevents the use of arbitrarily high sound
frequencies for the sound path distances under consideration. In view of
additional acoustic ground effects (see Sect. 4.1.2), an optimal sound
frequency of 7 kHz results for the investigated length scale up to 100 m.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5" specific-use="star"><caption><p>Example of a received acoustic signal (normalized signal amplitude,
nSA, <bold>b</bold>; distance of source and receiver: 70.45 m) and corresponding
normalized cross-correlation function (nCCF, <bold>a</bold>) between the received
and the generated signal. The maximum position of nCCF is marked with a
filled (red) point. The associated time lag corresponds to the travel time of
the signal.</p></caption>
            <?xmltex \igopts{width=369.885827pt}?><graphic xlink:href="https://amt.copernicus.org/articles/10/4165/2017/amt-10-4165-2017-f05.png"/>

          </fig>

      <p>After propagating through the atmosphere, the sound signal was received by
the microphones and was high-pass filtered. The analogue acoustic signals were
sampled by the acoustic spectrometer card with a sample rate of 51.2 kHz,
i.e., with a time resolution of 19.5 <inline-formula><mml:math id="M128" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>s. The delay time between
output and input channels is known and constant and can therefore be
neglected in the further analysis of accuracy. Subsequently, the sent signal
was cross correlated with the received signal. The maximum of the
cross-correlation function (CCF) corresponds to the best fit of the sent
signal pattern within the received signal. The associated time shift agrees
with the sought travel time (Hussain et al., 2011b; Fig. 5).</p>
      <p>To increase the accuracy of the detected maximum, an interpolation with a
sinc function was applied, which led to an increased temporal resolution by a
factor of about 10. Thus, an uncertainty for travel-time estimation of about
2 <inline-formula><mml:math id="M129" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>s resulted from sampling (Holstein et al., 2004).</p>
      <p>The A-TOM masts marked the corners of a rectangle at each level above surface
(see Fig. 1). In order to separate the scalar influence of temperature and
the vectorial influence of wind velocity on the speed of sound between a
source and a receiver (Eq. 3), sound propagation was considered in opposing
directions. Similar to the analysis of ultrasonic measurements (e.g.,
Hanafusa et al., 1982), the assumption of reciprocal sound propagation
(straight-ray propagation between two pairs of speakers and microphones) was
applied:

                  <disp-formula specific-use="align" content-type="numbered"><mml:math id="M130" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi>c</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">eff</mml:mi><mml:mi mathvariant="normal">forth</mml:mi></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>d</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mi mathvariant="normal">forth</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:msqrt><mml:mrow><mml:msub><mml:mi mathvariant="italic">γ</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub><mml:msub><mml:mi>R</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub></mml:mrow></mml:msqrt><mml:mo>+</mml:mo><mml:msub><mml:mi>v</mml:mi><mml:mi mathvariant="normal">Ray</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="Ch1.E10"><mml:mtd/><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mi>c</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">eff</mml:mi><mml:mi mathvariant="normal">back</mml:mi></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>d</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mi mathvariant="normal">back</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:msqrt><mml:mrow><mml:msub><mml:mi mathvariant="italic">γ</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub><mml:msub><mml:mi>R</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub></mml:mrow></mml:msqrt><mml:mo>-</mml:mo><mml:msub><mml:mi>v</mml:mi><mml:mi mathvariant="normal">Ray</mml:mi></mml:msub><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

              Here, <inline-formula><mml:math id="M131" display="inline"><mml:mi>d</mml:mi></mml:math></inline-formula> is the distance between sound source and receiver, <inline-formula><mml:math id="M132" display="inline"><mml:mrow><mml:msub><mml:mi>v</mml:mi><mml:mi mathvariant="normal">Ray</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>
is the wind component in the direction of sound propagation (cp. Eq. 4), and
<inline-formula><mml:math id="M133" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mi mathvariant="normal">forth</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M134" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mi mathvariant="normal">back</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are estimated travel times in
opposing directions. If the distance <inline-formula><mml:math id="M135" display="inline"><mml:mi>d</mml:mi></mml:math></inline-formula> is known, it follows from Eq. (10):

                  <disp-formula specific-use="align" content-type="numbered"><mml:math id="M136" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E11"><mml:mtd/><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msqrt><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub></mml:mrow></mml:msqrt><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>d</mml:mi><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:msqrt><mml:mrow><mml:msub><mml:mi mathvariant="italic">γ</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub><mml:msub><mml:mi>R</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub></mml:mrow></mml:msqrt></mml:mrow></mml:mfrac></mml:mstyle><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mi mathvariant="normal">forth</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mi mathvariant="normal">back</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mtext>and</mml:mtext></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E12"><mml:mtd/><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mi>v</mml:mi><mml:mi mathvariant="normal">Ray</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>d</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mi mathvariant="normal">forth</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mi mathvariant="normal">back</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

              In this way, the derivation of wind components along six sound paths as
a line-averaged data set is possible. Wind components <inline-formula><mml:math id="M137" display="inline"><mml:mi>u</mml:mi></mml:math></inline-formula> (in east direction)
and <inline-formula><mml:math id="M138" display="inline"><mml:mi>v</mml:mi></mml:math></inline-formula> (in north direction) are calculated from Eq. (12) for each of the two
sound paths approximately perpendicular to each other (e.g., path between
ATOM1–ATOM2 and ATOM1–ATOM4, Fig. 1).</p>
</sec>
<sec id="Ch1.S3.SS3.SSS2">
  <title>Spectral data acquisition and processing of OP-FTIR
measurements</title>
      <p>The passive and active IR spectrometer systems were linked with their own
controlling laptops using OPUS software (Bruker Optics Inc.). The software
provides interfaces to control measurement options such as spectral region
for measurement, wavenumber resolution, and parameters for discrete Fourier
transform, apodization function, and repeat intervals. Additionally, for
passive measurements a user-written macro program is necessary for
controlling the instrument. This macro contains the detailed measurement
sequence for a whole passive scan including the parameters for the preceding
internal blackbody measurements and the acquisition parameters for the
different scans (number of scan directions, vertical and horizontal lens
angle, repetition rate).</p>
      <p>An OP-FTIR spectroscopic measurement results in a single beam spectrum (SBS).
It describes the distribution of signal intensity with respect to the
wavenumber. The active SBS covers a wavenumber region between 600 and
3900 cm<inline-formula><mml:math id="M139" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>; the passive SBS ranges between 600 and 1600 cm<inline-formula><mml:math id="M140" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>.
Subsequent data processing of SBSs is necessary for concentration analysis.</p>
      <p>In practice, the spectra obtained by the spectrometer device are controlled by
instrumental line shape <inline-formula><mml:math id="M141" display="inline"><mml:mrow><mml:msub><mml:mi>f</mml:mi><mml:mi mathvariant="normal">ILS</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>:
              <disp-formula id="Ch1.E13" content-type="numbered"><mml:math id="M142" display="block"><mml:mrow><mml:msup><mml:mi>I</mml:mi><mml:mo>′</mml:mo></mml:msup><mml:mfenced close=")" open="("><mml:mi mathvariant="italic">ν</mml:mi></mml:mfenced><mml:mo>=</mml:mo><mml:mi>I</mml:mi><mml:mfenced close=")" open="("><mml:mi mathvariant="italic">ν</mml:mi></mml:mfenced><mml:mo>⊗</mml:mo><mml:msub><mml:mi>f</mml:mi><mml:mi mathvariant="normal">ILS</mml:mi></mml:msub><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where <inline-formula><mml:math id="M143" display="inline"><mml:mo>⊗</mml:mo></mml:math></inline-formula> represents convolution.</p>
      <p>A transmission spectrum TR(<inline-formula><mml:math id="M144" display="inline"><mml:mrow><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> of the sample can be obtained by dividing
the measured spectrum <inline-formula><mml:math id="M145" display="inline"><mml:mrow><mml:msup><mml:mi>I</mml:mi><mml:mo>′</mml:mo></mml:msup><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> by the measured or simulated background
spectrum <inline-formula><mml:math id="M146" display="inline"><mml:mrow><mml:msubsup><mml:mi>I</mml:mi><mml:mn mathvariant="normal">0</mml:mn><mml:mrow><mml:mo>*</mml:mo><mml:mo>′</mml:mo></mml:mrow></mml:msubsup><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> which is also influenced by
<inline-formula><mml:math id="M147" display="inline"><mml:mrow><mml:msub><mml:mi>f</mml:mi><mml:mi mathvariant="normal">ILS</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>:
              <disp-formula id="Ch1.E14" content-type="numbered"><mml:math id="M148" display="block"><mml:mrow><mml:mtext>TR</mml:mtext><mml:mfenced close=")" open="("><mml:mi mathvariant="italic">ν</mml:mi></mml:mfenced><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msup><mml:mi>I</mml:mi><mml:mo>′</mml:mo></mml:msup><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:msubsup><mml:mi>I</mml:mi><mml:mn mathvariant="normal">0</mml:mn><mml:mrow><mml:mo>∗</mml:mo><mml:mo>′</mml:mo></mml:mrow></mml:msubsup><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
            The absorbance spectrum <inline-formula><mml:math id="M149" display="inline"><mml:mrow><mml:mi>A</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> of the target component is introduced as a
linear function related to target compound concentration:
              <disp-formula id="Ch1.E15" content-type="numbered"><mml:math id="M150" display="block"><mml:mrow><mml:mi>A</mml:mi><mml:mfenced close=")" open="("><mml:mi mathvariant="italic">ν</mml:mi></mml:mfenced><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="normal">log</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub><mml:mfenced open="(" close=")"><mml:mtext>TR</mml:mtext><mml:mfenced close=")" open="("><mml:mi mathvariant="italic">ν</mml:mi></mml:mfenced></mml:mfenced><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.4343</mml:mn><mml:mi>d</mml:mi><mml:mo>⋅</mml:mo><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">T</mml:mi></mml:msub><mml:mfenced open="(" close=")"><mml:mi mathvariant="italic">ν</mml:mi></mml:mfenced><mml:mo>⋅</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">T</mml:mi></mml:msub><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
            The crucial difference between active and passive OP-FTIR measurements
results from the availability of different <inline-formula><mml:math id="M151" display="inline"><mml:mrow><mml:msub><mml:mi>I</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> sources:
<list list-type="bullet"><list-item><p>active: superposition of non-modulated artificial IR source (wavenumber
region 700–4000 cm<inline-formula><mml:math id="M152" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and additional ambient (passive) background
emissions for wavenumbers lower than 1500 cm<inline-formula><mml:math id="M153" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>.</p></list-item><list-item><p>passive: only ambient background emissions resulting from black body
radiation according to Planck's law limited to wavenumber region between 700
and 1500 cm<inline-formula><mml:math id="M154" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. This emission is a function of radiometric temperature
(temperature of the IR-emitting surface).</p></list-item></list>
The data processing of active spectra includes the emission correction of
SBSs for lower wavenumber regions, the calculation of transmission spectra
based on reference spectra, and the determination of spectral windows for
CO<inline-formula><mml:math id="M155" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration analysis. The concentration retrieval uses a
nonlinear least-squares fitting of measured by calculated spectra using
HITRAN spectral library (Rothman et al., 2013).</p>
      <p>The processing of passive spectral data is different compared to active
spectra. Passive OP-FTIR measures radiation from background traversing the
atmosphere between the background and the spectrometer. The black body
radiation <inline-formula><mml:math id="M156" display="inline"><mml:mrow><mml:mi>B</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo><mml:mi>T</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> can be described according to Planck's radiation law:
              <disp-formula id="Ch1.E16" content-type="numbered"><mml:math id="M157" display="block"><mml:mrow><mml:mi>B</mml:mi><mml:mfenced open="(" close=")"><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo><mml:mi>T</mml:mi></mml:mfenced><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi>h</mml:mi><mml:msup><mml:mi>c</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msup><mml:mi mathvariant="italic">ν</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mi mathvariant="normal">exp</mml:mi><mml:mfenced close=")" open="("><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mi>h</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi>c</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="italic">ν</mml:mi></mml:mrow><mml:mrow><mml:msub><mml:mi>k</mml:mi><mml:mi mathvariant="normal">B</mml:mi></mml:msub><mml:mi>T</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where <inline-formula><mml:math id="M158" display="inline"><mml:mi>h</mml:mi></mml:math></inline-formula> is Planck's constant, <inline-formula><mml:math id="M159" display="inline"><mml:mi>c</mml:mi></mml:math></inline-formula> is speed of light, and <inline-formula><mml:math id="M160" display="inline"><mml:mrow><mml:msub><mml:mi>k</mml:mi><mml:mi mathvariant="normal">B</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is
Boltzmann's constant. In order to obtain radiance spectra or brightness
temperature spectra, a radiometric calibration of SBSs is necessary. This
calibration algorithm is based on the SBS measurement of an ideal black body
within the spectrometer device at two known temperatures:
<inline-formula><mml:math id="M161" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi>C</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M162" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> ambient temperature and <inline-formula><mml:math id="M163" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi>H</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">353</mml:mn></mml:mrow></mml:math></inline-formula> K. The radiance spectra
<inline-formula><mml:math id="M164" display="inline"><mml:mrow><mml:mi>L</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo><mml:mi>T</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> of a measured SBS(<inline-formula><mml:math id="M165" display="inline"><mml:mrow><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo><mml:mi>T</mml:mi></mml:mrow></mml:math></inline-formula>) can be obtained following Revercomb et
al. (1988) from

                  <disp-formula specific-use="align" content-type="numbered"><mml:math id="M166" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi>L</mml:mi><mml:mfenced close=")" open="("><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo><mml:mi>T</mml:mi></mml:mfenced></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mtext>SBS</mml:mtext><mml:mfenced open="(" close=")"><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo><mml:mi>T</mml:mi></mml:mfenced><mml:mo>-</mml:mo><mml:mtext>SBS</mml:mtext><mml:mfenced open="(" close=")"><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi>C</mml:mi></mml:msub></mml:mfenced></mml:mrow><mml:mrow><mml:mtext>SBS</mml:mtext><mml:mfenced close=")" open="("><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi>H</mml:mi></mml:msub></mml:mfenced><mml:mo>-</mml:mo><mml:mtext>SBS</mml:mtext><mml:mfenced close=")" open="("><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi>C</mml:mi></mml:msub></mml:mfenced></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="Ch1.E17"><mml:mtd/><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>⋅</mml:mo><mml:mfenced close=")" open="("><mml:mi>B</mml:mi><mml:mfenced open="(" close=")"><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi>H</mml:mi></mml:msub></mml:mfenced><mml:mo>-</mml:mo><mml:mi>B</mml:mi><mml:mfenced close=")" open="("><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi>C</mml:mi></mml:msub></mml:mfenced></mml:mfenced><mml:mo>+</mml:mo><mml:mi>B</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:msub><mml:mi>T</mml:mi><mml:mi>C</mml:mi></mml:msub><mml:mo>)</mml:mo><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

              The determination of transmission spectra TR(<inline-formula><mml:math id="M167" display="inline"><mml:mrow><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> requires a radiative
transfer model that includes the radiance of the background <inline-formula><mml:math id="M168" display="inline"><mml:mrow><mml:msub><mml:mi>L</mml:mi><mml:mtext>B</mml:mtext></mml:msub><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mtext>B</mml:mtext></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> as well as the self-radiance of the considered air volume
<inline-formula><mml:math id="M169" display="inline"><mml:mrow><mml:mi>B</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mtext>air</mml:mtext></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> (Liu et al., 2008):
              <disp-formula id="Ch1.E18" content-type="numbered"><mml:math id="M170" display="block"><mml:mrow><mml:mtext>TR</mml:mtext><mml:mfenced close=")" open="("><mml:mi mathvariant="italic">ν</mml:mi></mml:mfenced><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi>L</mml:mi><mml:mfenced open="(" close=")"><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo><mml:mi>T</mml:mi></mml:mfenced><mml:mo>-</mml:mo><mml:mi>B</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mtext>air</mml:mtext></mml:msub><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:msub><mml:mi>L</mml:mi><mml:mi mathvariant="normal">B</mml:mi></mml:msub><mml:mfenced close=")" open="("><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">B</mml:mi></mml:msub></mml:mfenced><mml:mo>-</mml:mo><mml:mi>B</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">air</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi>L</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:msub><mml:mi>L</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
            Similar to the active spectra processing, the calculated transmission spectra
can be analyzed to obtain PIC values based on the minimization of the
difference between measured and simulated spectra. For both OP-FTIR
techniques the nonlinear relation between spectral signature of the target
gas and its column density is used for the quantification. The radiative
transport model and the influences of the applied spectrometer are required
input parameters. The column density is the unknown model parameter. The
forward modeling approach is based on the calculation of synthetic spectral
windows (10–100 cm<inline-formula><mml:math id="M171" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> including the consideration of multiple
parameters such as column density for each species (including additional
atmospheric substances), background radiation, temperature, pressure, and
instrumental line shape functions. In the next step the synthetic and
measured spectral windows are compared. Least-squares fitting algorithms
(e.g., classical least-squares regression, CLS; partial least-squares
regression PLS) are applied in order to iteratively minimize the difference
between both of them (Harig and Matz, 2001; Griffith et al., 2012; Cieszczyk,
2014).</p><?xmltex \hack{\newpage}?>
</sec>
</sec>
</sec>
<sec id="Ch1.S4">
  <title>Results and discussion</title>
<sec id="Ch1.S4.SS1">
  <title>Uncertainty in A-TOM wind and temperature measurements</title>
<sec id="Ch1.S4.SS1.SSS1">
  <title>Accuracy of travel-time estimates</title>
      <p>Technical, signal-dependent, and methodological issues influence the
travel-time determination leading to uncertainties due to sampling, signal
analysis and cross correlation, calculation of sound speed, and
recalculation of wind speed and temperature.</p>
      <p>Most important of all, the SNR should be as high as possible. Thus, sound
attenuation due to sound propagation effects should be minimized. A point
source generates spherical waves in an unbounded homogeneous atmosphere
(e.g., Salomons, 2001). In this simple case the sound pressure level at a
microphone can be calculated from the sound power of the loudspeaker together
with the effects of spherical spreading, i.e., geometrical sound attenuation,
and attenuation due to air absorption. Atmospheric absorption is primarily
dependent on sound frequency and secondarily on air temperature and humidity.
The attenuation of sound level is about 8–9 dB/100 m for the used sound
frequency of 7 kHz and typical values of meteorological quantities (DIN ISO
9613-1, 1993; temperature: 15 <inline-formula><mml:math id="M172" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, relative humidity: 50 %, air
pressure: 101 325 Pa). Together with spherical spreading, a sound
attenuation of 49–55 dB results for distances between 50 and 70 m. This
free-field attenuation is always occurring and must be considered if one
prepares the amplifiers and loudspeakers for measurements.</p>
      <p>Additionally, disturbing sounds near the microphones should be avoided. The
flow field itself leads to the most important disturbance. With the used
windscreens, a maximum wind speed of about 6 m s<inline-formula><mml:math id="M173" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> is desirable without
a noticeably changed characteristic of microphone sensitivity. Otherwise,
higher efforts are necessary to protect the microphones against environmental
sound.</p>
      <p>It was explained in Sect. 3.3.1 that the analogue signal is sampled with a
sample rate of 51.2 kHz (time resolution of 19.5 <inline-formula><mml:math id="M174" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>s). The
travel-time estimation is improved by using an interpolation technique which
results in an uncertainty of about 2 <inline-formula><mml:math id="M175" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>s for the travel-time data
from sampling algorithm. The period duration of a 7 kHz signal is
1/7000 Hz <inline-formula><mml:math id="M176" display="inline"><mml:mo>≈</mml:mo></mml:math></inline-formula> 143 <inline-formula><mml:math id="M177" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>s, i.e., about
51.2 kHz/7 kHz <inline-formula><mml:math id="M178" display="inline"><mml:mo>≈</mml:mo></mml:math></inline-formula> 7.3 samples for a digitization frequency of
51.2 kHz. Neighboring maxima of the CCF are separated by about seven samples.
To rate this value it is helpful to calculate the typical travel-time
variations (i.e., <inline-formula><mml:math id="M179" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> in sample units due to variability in
meteorological data (Table 2). A change in temperature of 1 K results (for a
windless atmosphere) in a variation of about 0.6 m s<inline-formula><mml:math id="M180" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in sound speed
(see Eq. 4). In comparison to that, the variations in wind speed (wind
component along sound path) result in equal changes in sound speed. If there
are variations in both quantities, temperature and wind speed, the effects on
the effective sound speed are summed up according to Eq. (3).</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2"><caption><p>Variability in acoustic travel time (in rounded sample units) due to
changes in temperature and wind speed for a mean temperature of about
8 <inline-formula><mml:math id="M181" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="5">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right" colsep="1"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:thead>
       <oasis:row>  
         <oasis:entry colname="col1">Source–receiver</oasis:entry>  
         <oasis:entry namest="col2" nameend="col3" align="center" colsep="1">Temperature </oasis:entry>  
         <oasis:entry namest="col4" nameend="col5" align="center">Wind speed  </oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">distance (m)</oasis:entry>  
         <oasis:entry rowsep="1" namest="col2" nameend="col3" align="center" colsep="1">variation of </oasis:entry>  
         <oasis:entry rowsep="1" namest="col4" nameend="col5" align="center">variation of </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">0.5 K</oasis:entry>  
         <oasis:entry colname="col3">1.0 K</oasis:entry>  
         <oasis:entry colname="col4">0.5 m s<inline-formula><mml:math id="M182" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col5">1.0 m s<inline-formula><mml:math id="M183" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>  
         <oasis:entry colname="col1">50</oasis:entry>  
         <oasis:entry colname="col2">7</oasis:entry>  
         <oasis:entry colname="col3">13</oasis:entry>  
         <oasis:entry colname="col4">11</oasis:entry>  
         <oasis:entry colname="col5">22</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">70</oasis:entry>  
         <oasis:entry colname="col2">9</oasis:entry>  
         <oasis:entry colname="col3">18</oasis:entry>  
         <oasis:entry colname="col4">15</oasis:entry>  
         <oasis:entry colname="col5">30</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p>To decrease the uncertainty due to analysis of CCF, it is possible to use the
maximum of CCF's absolute value. In this way, the neighboring maxima are
separated only by about 3.7 samples. This value for the travel-time accuracy
of 78.125 <inline-formula><mml:math id="M184" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>s (<inline-formula><mml:math id="M185" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 4 samples/51.2 kHz) is applied for the further
uncertainty analysis of sound speed, wind speed, and temperature for one
instantaneous travel-time measurement along one sound path.</p>
      <p>The influence of a faulty variable <inline-formula><mml:math id="M186" display="inline"><mml:mrow><mml:msub><mml:mi>x</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> on the result <inline-formula><mml:math id="M187" display="inline"><mml:mi>y</mml:mi></mml:math></inline-formula> can be estimated
by means of the Taylor series. If the absolute value of error <inline-formula><mml:math id="M188" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>x</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>
is small enough, the Taylor series can be aborted after the linear term
resulting in an estimation of maximum error <inline-formula><mml:math id="M189" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:munder><mml:mo movablelimits="false">∑</mml:mo><mml:mi>i</mml:mi></mml:munder><mml:mfenced close="|" open="|"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>y</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>x</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. The complete
derivation of temperature and wind uncertainty is shown in Appendix A. It
results from Eq. (A4):
              <disp-formula id="Ch1.E19" content-type="numbered"><mml:math id="M190" display="block"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msqrt><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="italic">γ</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub><mml:msub><mml:mi>R</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:msqrt><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="italic">τ</mml:mi><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mfenced close=")" open="("><mml:msub><mml:mi mathvariant="italic">γ</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub><mml:msub><mml:mi>R</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub></mml:mfenced><mml:mo>+</mml:mo><mml:msubsup><mml:mi>v</mml:mi><mml:mi mathvariant="normal">Ray</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow><mml:mi>d</mml:mi></mml:mfrac></mml:mstyle></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
            For a travel-time accuracy of 78.125 <inline-formula><mml:math id="M191" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>s and a path length of 50 m
(minimum distance for the used geometry of sound paths), a maximum
temperature uncertainty of about 0.3 K results for the instantaneous single
path measurement. The uncertainty in relative wind measurements only
depends on the uncertainty in travel-time measurements. Assuming again that
travel-time errors along the same
path are identical,
Eq. (A5) follows:
              <disp-formula id="Ch1.E20" content-type="numbered"><mml:math id="M192" display="block"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>v</mml:mi><mml:mi mathvariant="normal">Ray</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="italic">τ</mml:mi><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mfenced open="(" close=")"><mml:msub><mml:mi mathvariant="italic">γ</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub><mml:msub><mml:mi>R</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub></mml:mfenced><mml:mo>+</mml:mo><mml:msubsup><mml:mi>v</mml:mi><mml:mi mathvariant="normal">Ray</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow><mml:mi>d</mml:mi></mml:mfrac></mml:mstyle></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
            Assuming a minimum path length of 50 m results in a maximum wind component
uncertainty for the instantaneous single path measurement of about
0.2 m s<inline-formula><mml:math id="M193" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. With increasing path lengths, the uncertainty in
temperature and wind components is decreasing.</p>
      <p>Considering these uncertainties as the standard deviation of a single
measurement, the standard error of mean values decreases by the factor
<inline-formula><mml:math id="M194" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:msqrt><mml:mi>n</mml:mi></mml:msqrt></mml:mrow></mml:math></inline-formula> if the measurement is repeated <inline-formula><mml:math id="M195" display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula> times under the same
boundary and environmental conditions. Applying averaging over 30 min (90
independent measurements, i.e., <inline-formula><mml:math id="M196" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:msqrt><mml:mn mathvariant="normal">90</mml:mn></mml:msqrt><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.1</mml:mn></mml:mrow></mml:math></inline-formula>) results in statistical
uncertainties of 0.03 K and 0.02 m s<inline-formula><mml:math id="M197" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, if all single measurement
results are usable.</p>
</sec>
<sec id="Ch1.S4.SS1.SSS2">
  <title>Accuracy of sound path estimation</title>
      <p>The uncertainty in line-averaged wind and temperature data is further
influenced by additional effects of the sound propagation between a
loudspeaker and a microphone: reflection at ground surface and refraction
due to wind and temperature gradients.</p>
      <p>In practice, the sound source and the receiver are close to the ground, which
makes sound propagation more complex. There are not only direct sound waves
between the loudspeaker and microphone, but also ground-reflected sound waves
(Fig. 6). This wavelet integrates the conditions of the air layer between the
ground surface and the receiver. Additionally, the interference between those
sound waves can lead to considerable effects which are estimated hereafter.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6"><caption><p>Scheme of sound wave reflection at the ground surface: direct (solid
lines) and reflected (dashed) sound paths, with (red) and without (black)
atmospheric refraction due to sound speed gradients.</p></caption>
            <?xmltex \igopts{width=184.942913pt}?><graphic xlink:href="https://amt.copernicus.org/articles/10/4165/2017/amt-10-4165-2017-f06.png"/>

          </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7" specific-use="star"><caption><p>Relative sound level depending on the sound frequency and on the
distance (red solid line: 50 m, blue dashed line: 70.7 m) from the sound
source to the receiver for a grassland surface. The height of the acoustic
devices above ground is 1.5 m <bold>(a)</bold> and 3.0 m <bold>(b)</bold>.</p></caption>
            <?xmltex \igopts{width=312.980315pt}?><graphic xlink:href="https://amt.copernicus.org/articles/10/4165/2017/amt-10-4165-2017-f07.png"/>

          </fig>

</sec>
<sec id="Ch1.S4.SS1.SSSx1" specific-use="unnumbered">
  <title>Reflection at ground surface</title>
      <p>To estimate the effect of reflection at ground surface, an idealized case is
considered (see Ostashev and Wilson, 2016): the air and ground are
homogeneous half spaces without any ambient motion. It follows, that the
total sound field at a receiver may be assumed as the sum of sound traveling
along a direct path from the source plus sound traveling along a path that is
reflected by the ground (Fig. 6, black lines). As a result, waves propagating
along the air–ground interface are not included. It is reasonable to use this
assumption so long as the angle between the ray path and the ground is not
too small (nearly grazing sound incidence).</p>
      <p>Assuming that the two sound waves are coherent, there is a constructive or
destructive interference. The sound level of the received signal increases or
decreases compared to the free-field, unbounded sound propagation.
Calculations following Salomons (2001) for a spherical sound wave traveling
through a homogeneous atmosphere with reflection at a homogeneous ground
surface are dependent on the sound propagation geometry (path length
differences of the direct and the reflected path), the sound frequency, and
the reflection coefficient. The latter is influenced by the impedance of the
ground surface which is usually parameterized by the sound frequency and the
acoustic flow resistance (Delany and Bazley, 1970).</p>
      <p>Commonly, the so-called relative sound level, i.e., the difference between the
sound pressure level with and without (i.e., unbounded free-field sound
propagation) ground surface, is applied to quantify the ground effect at the
receiver (Ostashev and Wilson, 2016). A positive relative sound level marks
amplification (maximum of 6 dB); a negative one denotes the attenuation of sound level
(in theory, an infinitely high attenuation is possible).</p>
      <p>It is essential for a high accuracy of acoustic travel-time measurements to
provide an SNR as large as possible at the receiver. Hence, a positive relative
sound level should be ensured, which can be realized using a suitable
combination of sound frequency, distance between the loudspeaker and microphone,
and heights of the acoustic devices above ground surface. Values of
relative sound level for a grassland site (with acoustic flow resistance of
200 kPa s<inline-formula><mml:math id="M198" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> m<inline-formula><mml:math id="M199" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and the geometry of A-TOM measurements are
shown in Fig. 7. For more detailed information to the calculation steps,
please see e.g., Salomons (2001) and Ziemann et al. (2013).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8" specific-use="star"><caption><p>Relative sound level depending on the distance and on the sound
frequency for a grassland surface. The height of the acoustic devices above
ground is 1.5 m <bold>(a)</bold> and 3.0 m <bold>(b)</bold>.</p></caption>
            <?xmltex \igopts{width=312.980315pt}?><graphic xlink:href="https://amt.copernicus.org/articles/10/4165/2017/amt-10-4165-2017-f08.png"/>

          </fig>

      <p>For a distance of 50 m between the loudspeaker and microphone and a signal
frequency of 7 kHz, the relative sound level is near or greater than 0 dB
for both heights (Fig. 7a, b). That means an amplification of received sound
level due to the ground effect. Higher or lower frequencies cause a so-called
ground dip, i.e., a strong decrease of sound level due to the negative
interference phenomenon. The greater the height of acoustic devices above
ground surface, the higher the sensitivity of the relative sound level to
frequency is (Fig. 7b in comparison to a). An increasing distance from sound
source (50 m in comparison to 70.7 m, with the latter corresponding to the
diagonals of the A-TOM measurement field) mitigates the risk of a ground dip in
the investigated frequency range.</p>
      <p>Figure 8a again shows the lower number of ground dips for the lower
measurement level of 1.5 m above ground surface. For an increasing height of
3 m above surface (Fig. 8b), the sensitivity of relative sound level on the
distance increases due to a growing number of ground dips. Furthermore, the
sound level attenuation increases for a growing distance. Thus, sound path
lengths of 50 and 70 m together with a signal frequency of 7 kHz are
favorable because of an optimized SNR of the received signal. Additionally,
Figs. 7 and 8 demonstrate the requirements for the frequency stability of the
sound sources. The applied loudspeakers meet these demands.</p>
      <p>For outdoor sound propagation, atmospheric turbulence occurs and results in
phase and amplitude fluctuations of the sound waves. This effect reduces the
coherence between the direct and the reflected sound wave followed by partly
attenuated and blurred interference impacts on the measured sound level.
The ground dip is especially reduced due to turbulence which increases the
SNR at the receiver for special sound frequencies and propagation geometries.
In this way, the results of Figs. 7 and 8 show rather extreme values of the
ground effect influencing the received sound level without atmospheric
turbulence. Very low-turbulence conditions occur, for example, during nighttime with
weak or no wind.</p>
      <p>Additionally, the finite length of the signal (Fig. 4) has to be considered
to evaluate the ground effect. It was examined whether the directly
propagating and the reflected sound wave parts could be separated due to
their time delay at the receiver. As a result, straight-line sound paths, i.e., a
homogeneous atmosphere, were again assumed. The time difference between
direct and reflected signal arrivals grow with increasing height
above ground of acoustic devices (Table 3).</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T3"><caption><p>Time difference (in sample units) between signal arrival of direct
and ground-reflected wave parts for a constant and homogeneous sound speed
(temperature of 8 <inline-formula><mml:math id="M200" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, calm).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:thead>
       <oasis:row>  
         <oasis:entry colname="col1">Source–receiver</oasis:entry>  
         <oasis:entry namest="col2" nameend="col3" align="center">Height above  </oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">distance (m)</oasis:entry>  
         <oasis:entry rowsep="1" namest="col2" nameend="col3" align="center">ground (m) </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">1.5</oasis:entry>  
         <oasis:entry colname="col3">3.0</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>  
         <oasis:entry colname="col1">50</oasis:entry>  
         <oasis:entry colname="col2">14</oasis:entry>  
         <oasis:entry colname="col3">55</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">70</oasis:entry>  
         <oasis:entry colname="col2">10</oasis:entry>  
         <oasis:entry colname="col3">39</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p>The greater the distance to the receiver, the smaller the time difference is.
For the sound propagation at the lower level (1.5 m above ground) and a
sound frequency of 7 kHz, i.e., period duration of about 0.14 ms (approximately
7 sample units), the signals of direct and reflected waves cannot be
distinguished because the signal itself has a length of approximately 10 periods
(approximately 1.4 ms <inline-formula><mml:math id="M201" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 72 sample units). This leads to a received signal
containing the acoustic ground effect in the measured sound level. The
strength of this effect depends on the amount of atmospheric turbulence and
the interference of direct and reflected sound waves. Furthermore, the real
measurement height of the acoustically derived wind velocity and temperature
can be slightly smaller than the geometrical height of the acoustic devices
above ground because the received signal partially contains the properties of
the atmospheric layer between ground surface and microphone. By shortening of the signal length,
the onset of direct and ground-reflected signals could be distinguished.
However, a shortened signal would cause a decrease in SNR and thus an increase in
uncertainty in travel-time determination.</p>
      <p>In addition to the effect of reflection at ground surface, refraction due to
wind and temperature gradients has to be considered for outdoor sound
propagation.</p>
</sec>
<sec id="Ch1.S4.SS1.SSSx2" specific-use="unnumbered">
  <title>Refraction due to sound speed gradients</title>
      <p>Atmospheric refraction can be described as a changed propagation direction of
sound waves (e.g., Salomons, 2001). The resulting curved sound paths lead to
a deviation from the straight-line sound propagation. The assumption of
reciprocal sound propagation, i.e., along straight lines between transmitter
and receiver, allows the simplified separation between the temperature and
the wind influence on the acoustic travel time (Eq. 10). However, it is
questionable to what extent the refracting effect due to temperature and wind
gradients affects this assumption. As a result, vertical gradients of horizontal
wind velocity and temperature are especially important because they are
usually greater than associated horizontal gradients.</p>
      <p>At first, the effect of downward refraction on the travel-time measurements
is estimated because this kind of refraction happens usually during cloudless
nights with a stably stratified atmosphere. Downward refraction occurs due to
positive gradients of effective sound speed (see Eq. 3), for instance during
a temperature inversion and/or for a sound propagation in wind direction
assuming an increasing wind speed with height above ground. If one supposes
that the curved rays can be approximated by circular arcs (strictly speaking
only valid in a motionless medium) depending on a constant vertical sound
speed gradient in a stratified atmosphere (e.g., Attenborough et al., 2007),
then the path length differences d<inline-formula><mml:math id="M202" display="inline"><mml:mi>l</mml:mi></mml:math></inline-formula> between the curved (first term) and
straight-line ray (second term <inline-formula><mml:math id="M203" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M204" display="inline"><mml:mrow><mml:mi>d</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> can be calculated from Snell's law
as follows:

                  <disp-formula specific-use="align" content-type="numbered"><mml:math id="M205" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi mathvariant="normal">d</mml:mi><mml:mi>l</mml:mi><mml:mo>=</mml:mo><mml:mi>sin⁡</mml:mi><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">S</mml:mi></mml:msub><mml:munderover><mml:mo movablelimits="false">∫</mml:mo><mml:mrow><mml:msub><mml:mi>z</mml:mi><mml:mtext>S</mml:mtext></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>z</mml:mi><mml:mtext>R</mml:mtext></mml:msub></mml:mrow></mml:munderover><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">eff</mml:mi></mml:msub><mml:mfenced open="(" close=")"><mml:mi>z</mml:mi></mml:mfenced></mml:mrow><mml:msqrt><mml:mrow><mml:msubsup><mml:mi>c</mml:mi><mml:mtext>effS</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>-</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">eff</mml:mi></mml:msub><mml:msup><mml:mfenced close=")" open="("><mml:mi>z</mml:mi></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msup><mml:mi mathvariant="normal">sin</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">S</mml:mi></mml:msub></mml:mrow></mml:msqrt></mml:mfrac></mml:mstyle><mml:mi mathvariant="normal">d</mml:mi><mml:mi>z</mml:mi><mml:mo>-</mml:mo><mml:mi>d</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mtext>with</mml:mtext></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="Ch1.E21"><mml:mtd/><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">eff</mml:mi></mml:msub><mml:mfenced open="(" close=")"><mml:mi>z</mml:mi></mml:mfenced><mml:mo>=</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mtext>effS</mml:mtext></mml:msub><mml:mo>+</mml:mo><mml:mi>z</mml:mi><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">d</mml:mi><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">eff</mml:mi></mml:msub><mml:mfenced close=")" open="("><mml:mi>z</mml:mi></mml:mfenced></mml:mrow><mml:mrow><mml:mi mathvariant="normal">d</mml:mi><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula></p>
      <p>Here, <inline-formula><mml:math id="M206" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mtext>S</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is the emission angle at the sound source (polar angle of
sound path measured from the positive <inline-formula><mml:math id="M207" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> axis, <inline-formula><mml:math id="M208" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="normal">S</mml:mi></mml:msub><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>; <inline-formula><mml:math id="M209" display="inline"><mml:mrow><mml:msub><mml:mi>z</mml:mi><mml:mtext>S</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>
and <inline-formula><mml:math id="M210" display="inline"><mml:mrow><mml:msub><mml:mi>z</mml:mi><mml:mtext>R</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> are the heights of the source and receiver, respectively;
<inline-formula><mml:math id="M211" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mtext>effS</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is the effective sound speed at the height of the sound
source; and <inline-formula><mml:math id="M212" display="inline"><mml:mrow><mml:mi mathvariant="normal">d</mml:mi><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">eff</mml:mi></mml:msub><mml:mfenced open="(" close=")"><mml:mi>z</mml:mi></mml:mfenced><mml:mo>/</mml:mo><mml:mi mathvariant="normal">d</mml:mi><mml:mi>z</mml:mi></mml:mrow></mml:math></inline-formula> marks the constant
vertical sound speed gradient. This equation can be easily solved in
discretized form with finite thickness of several atmospheric layers.
As a result, the emission angle of sound rays is varied step by step until
getting a connecting line between sound source and receiver point of the
given measurement setup. To estimate typical values of effective sound speed
profiles on a cloudless summer day similar to experimental conditions, a
numerical simulation of meteorological conditions was performed using HIRVAC
(HIgh Resolution Vegetation Atmosphere Coupler; Mix et al., 1994; Ziemann,
1998; Goldberg and Bernhofer, 2001). The two-dimensional version of this
boundary layer model (approximately 100 <inline-formula><mml:math id="M213" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 100 model layers, Queck et al.,
2015) solves the basic equations for momentum, temperature, and humidity. It
contains additional terms describing the exchange of energy and humidity
between vegetation and atmosphere at each model level. Calculation of
temperature, wind velocity, and humidity profiles were followed by a
calculation of the effective sound speed and its vertical gradients as
average over 30 min for several local times (Fig. 9).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F9"><caption><p>Vertical profiles of vertical effective sound speed gradient
(30 min mean) in sound propagation direction simulated by HIRVAC for
homogeneous grassland (vegetation height <inline-formula><mml:math id="M214" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.3 m; leaf area
index <inline-formula><mml:math id="M215" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 2) on 15 July (example for a cloudless summer day similar to
experimental conditions) for different day times (LT <inline-formula><mml:math id="M216" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> local time).</p></caption>
            <?xmltex \igopts{width=184.942913pt}?><graphic xlink:href="https://amt.copernicus.org/articles/10/4165/2017/amt-10-4165-2017-f09.png"/>

          </fig>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T4" specific-use="star"><caption><p>Comparison of travel-time uncertainties. Above: travel-time
difference (in sample units), recalculated temperature and wind speed
differences in brackets, between straight-line and curved sound path through
the atmosphere for a maximum vertical gradient of effective sound speed of
0.6 s<inline-formula><mml:math id="M217" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (during nighttime) on a summer day over grassland. Below:
travel-time uncertainty (temperature and wind speed uncertainty in brackets)
due to signal analysis using CCF, see Sect. 4.1.1.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:thead>
       <oasis:row>  
         <oasis:entry colname="col1">Uncertainty due to</oasis:entry>  
         <oasis:entry colname="col2">Source–receiver</oasis:entry>  
         <oasis:entry namest="col3" nameend="col4" align="center">Height above  </oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">distance (m)</oasis:entry>  
         <oasis:entry rowsep="1" namest="col3" nameend="col4" align="center">ground (m) </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3">1.5</oasis:entry>  
         <oasis:entry colname="col4">3.0</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>  
         <oasis:entry colname="col1">Travel-time difference</oasis:entry>  
         <oasis:entry colname="col2">50.0</oasis:entry>  
         <oasis:entry colname="col3">2</oasis:entry>  
         <oasis:entry colname="col4">0</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">between straight-line and</oasis:entry>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3">(0.2 K; 0.1 m s<inline-formula><mml:math id="M218" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">curved sound path</oasis:entry>  
         <oasis:entry colname="col2">70.0</oasis:entry>  
         <oasis:entry colname="col3">6</oasis:entry>  
         <oasis:entry colname="col4">1</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3">(0.3 K; 0.2 m s<inline-formula><mml:math id="M219" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col4">(0.1 K; 0.0 m s<inline-formula><mml:math id="M220" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Signal analysis of travel-</oasis:entry>  
         <oasis:entry colname="col2">50.0/70.0</oasis:entry>  
         <oasis:entry colname="col3">4</oasis:entry>  
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">time measurements</oasis:entry>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3">(0.3/0.2 K; 0.2/0.1 m s<inline-formula><mml:math id="M221" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col4"/>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p>At the transmitter height of 1.5  or 3 m, positive vertical gradients of
effective sound speed can be expected for a sound propagation in wind
direction. In general, the vertical gradients increase with decreasing
height. The highest downwind gradients occur at nighttime and reach strong
values of 0.57 s<inline-formula><mml:math id="M222" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (0.25 s<inline-formula><mml:math id="M223" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> at a height of 1.5 m (3 m). In
comparison, the gradients at noon are significantly smaller mainly due to
differences in the temperature profile between night (temperature inversion)
and day (decreasing temperature with height). Figure 6 (red lines) shows an
example for the calculated curved sound rays applying a sound speed gradient
of about 0.6 s<inline-formula><mml:math id="M224" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. The height of the curved sound path above the
measurement height of 1.5 m (3 m) is about 0.5 m (0.2 m) for a distance
of 50 m, and 1.0 m (0.5 m) for a 70 m distance between sound source and
receiver. Over this height range, the direct sound path between the loudspeaker
and receiver integrates atmospheric conditions due to refraction.
Additionally, the effect of ground reflection occurs again (Fig. 6, dashed
red lines), which leads to a further integrating effect of a height layer with
finite thickness around the measurement height.</p>
      <p>Outgoing from the simulated vertical sound speed gradients, a travel-time
difference between the curved and straight-line direct sound path is calculated
according to Eq. (21), including the different sound speed values along the
different sound paths (Table 4). Please note that the used sound speed
gradients are the maximum values in the simulated diurnal cycle. Therefore,
the uncertainty estimation above represents a rather conservative estimation.</p>
      <p>These travel-time differences are mostly smaller than the travel-time
uncertainty due to the signal analysis (4 sample units, see Sect. 4.1.1).
Especially for short distances at a height of 3 m, the difference is
negligible. The same magnitude of uncertainties occurs only at longer distances and smaller measurement heights above
ground. In this case it has to be
proven during the further data and uncertainty analysis that the measured
vertical sound speed gradients are similar to the simulated ones. Thus,
considering downwind gradients especially for nighttime conditions, the
vertical sound speed gradient should be measured, e.g., using accompanying
ultrasonic measurements to ensure the applicability of reciprocal sound
propagation.</p>
      <p>The analysis of measured vertical temperature gradients shows (see Sect. 4.3)
that the above-presented estimation of uncertainty mostly reflects a worst
case. For further investigations in this study, the data at a height of
1.5 m above ground were used only for the short distance of 50 m. The
deviation from the straight-ray approximation leads in this case to an
additional travel-time uncertainty of 2 sample units according to Table 4.</p>
      <p>Finally, the sound propagation against the wind direction is considered. Only
negative sound speed gradients result from the investigations with the
boundary layer model HIRVAC. Maximum gradients occur at midday (not
shown). This leads to an upward-directed refraction of the sound waves in the
atmosphere. For such conditions, theoretically no signal reaches the
microphone which is located at the same height level as the loudspeaker but
several decameters away from the speaker. Nevertheless, due to a finite
extent of the microphone, its spherical directional pattern, and the
scattering effect of atmospheric turbulence (Salomons, 2001), it is almost
always possible to detect a signal in upwind direction if the wind speed is
smaller than 6 m s<inline-formula><mml:math id="M225" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> at the height of acoustic devices and therewith
the vertical gradient is moderate (around 0.3 s<inline-formula><mml:math id="M226" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. If a travel-time
could be analyzed, the above-explained uncertainty estimation for downward
refraction could also be applied for the upward refracting case.</p>
      <p>To sum up the outcomes of Sect. 4.1, the following maximum uncertainties result
for measurements at a height of 1.5 m above ground and for distances between
the loudspeaker and microphone of 50 m: (1) 4 sample units due to signal
analysis; (2) 2 sample units due to sound refraction. The resulting
travel-time uncertainty of 6 sample units can be recalculated into an
uncertainty of about 0.4 K and 0.3 m s<inline-formula><mml:math id="M227" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for instantaneous
temperature and wind measurements (see Sect. 4.1.1). Applying averaging over
30 min results in statistical uncertainties of about 0.04 K and
0.03 m s<inline-formula><mml:math id="M228" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>.</p>
</sec>
</sec>
<sec id="Ch1.S4.SS2">
  <?xmltex \opttitle{Uncertainty in OP-FTIR CO${}_{{2}}$ measurements}?><title>Uncertainty in OP-FTIR CO<inline-formula><mml:math id="M229" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> measurements</title>
      <p>Despite the great potential of OP-FTIR spectroscopic measurements, the
technology is not commonly used for ground-based micrometeorological
atmospheric monitoring due to the uncertainties in obtaining reliable
information from the measured spectra (Cieszczyk, 2014). The uncertainties
for the retrieval of gas concentration from OP-FTIR spectra can be classified
in (1) ambient environmental influences, (2) instrumental influences, and
(3) data processing influences.</p>
      <p>Infrared spectral data are mainly controlled by the environmental conditions
such as pressure and temperature variations. Horrocks et al. (2001)
demonstrated that especially temperature has a significant impact on
retrieval error and is an important parameter under consideration for
subsequent data processing. The challenge in determining gas concentration
using passive OP-FTIR under conditions with changing temperatures was
described by Cieszczyk (2014).</p>
      <p>Following Eq. (18), the main drawback and source for uncertainty in
concentration determination processing from passive spectra obviously result
from the dependency of signal amplitude from the difference between
background temperature <inline-formula><mml:math id="M230" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">B</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (thermal IR radiation) and target
compound temperature <inline-formula><mml:math id="M231" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">air</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, which is assumed to be in thermal
equilibrium with considered air volume. Usually, for passive OP-FTIR remote
sensing this temperature difference is only a few kelvins, which affects an
increasing error for the difference between spectral radiance of the
background and the air (Polak et al., 1995; Harig et al., 2006). Using the
approach proposed by Polak et al. (1995), the impact on transmission spectra
can be analyzed by introducing a disturbed air temperature <inline-formula><mml:math id="M232" display="inline"><mml:mrow><mml:msup><mml:mi>T</mml:mi><mml:mo>′</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>:
            <disp-formula id="Ch1.E22" content-type="numbered"><mml:math id="M233" display="block"><mml:mrow><mml:msup><mml:mi>T</mml:mi><mml:mo>′</mml:mo></mml:msup><mml:mo>=</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">air</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mi mathvariant="normal">T</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where <inline-formula><mml:math id="M234" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mi mathvariant="normal">T</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is a given temperature error. This error leads
to an erroneous spectral radiance of the air volume <inline-formula><mml:math id="M235" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mi mathvariant="normal">L</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>:
            <disp-formula id="Ch1.E23" content-type="numbered"><mml:math id="M236" display="block"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mi mathvariant="normal">L</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mi>B</mml:mi><mml:mfenced close=")" open="("><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo><mml:msup><mml:mi>T</mml:mi><mml:mo>′</mml:mo></mml:msup></mml:mfenced><mml:mo>-</mml:mo><mml:mi>B</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">air</mml:mi></mml:msub><mml:mo>)</mml:mo><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
          The disturbed transmission TR<inline-formula><mml:math id="M237" display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>(<inline-formula><mml:math id="M238" display="inline"><mml:mrow><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is then given by
            <disp-formula id="Ch1.E24" content-type="numbered"><mml:math id="M239" display="block"><mml:mrow><mml:msup><mml:mtext>TR</mml:mtext><mml:mo>′</mml:mo></mml:msup><mml:mfenced close=")" open="("><mml:mi mathvariant="italic">ν</mml:mi></mml:mfenced><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mtext>TR</mml:mtext><mml:mfenced close=")" open="("><mml:mi mathvariant="italic">ν</mml:mi></mml:mfenced><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mi mathvariant="normal">L</mml:mi></mml:msub><mml:mo>/</mml:mo><mml:msub><mml:mi>L</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mi mathvariant="normal">L</mml:mi></mml:msub><mml:mo>/</mml:mo><mml:msub><mml:mi>L</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></disp-formula>
          Using Eq. (15) the disturbed absorbance can be calculated using TR<inline-formula><mml:math id="M240" display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>(<inline-formula><mml:math id="M241" display="inline"><mml:mrow><mml:mi mathvariant="italic">ν</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. Figure 10 shows the relative absorbance error <inline-formula><mml:math id="M242" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>A</mml:mi><mml:mo>/</mml:mo><mml:mi>A</mml:mi></mml:mrow></mml:math></inline-formula>, which is
directly related to the error of column density <inline-formula><mml:math id="M243" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">T</mml:mi></mml:msub><mml:mo>⋅</mml:mo><mml:mi>d</mml:mi><mml:mo>)</mml:mo><mml:mo>/</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">T</mml:mi></mml:msub><mml:mo>⋅</mml:mo><mml:mi>d</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, as a function of <inline-formula><mml:math id="M244" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mi mathvariant="normal">T</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> for
various temperature differences (<inline-formula><mml:math id="M245" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">B</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">air</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. As
expected, the error for absorbance is increasing enormously for small
temperature differences. Reasonable absorbance errors can be achieved for an
absolute value of <inline-formula><mml:math id="M246" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mi mathvariant="normal">T</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> smaller than 0.4 K.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F10"><caption><p>The relative absorbance error <inline-formula><mml:math id="M247" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>A</mml:mi><mml:mo>/</mml:mo><mml:mi>A</mml:mi></mml:mrow></mml:math></inline-formula> as a function of a
given temperature error <inline-formula><mml:math id="M248" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mi mathvariant="normal">T</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> for various temperature
differences (<inline-formula><mml:math id="M249" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">B</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">air</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. The errors were calculated
for a transmission value of <inline-formula><mml:math id="M250" display="inline"><mml:mrow><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn></mml:mrow></mml:math></inline-formula> at wavenumber 800 cm<inline-formula><mml:math id="M251" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>.</p></caption>
          <?xmltex \igopts{width=224.776772pt}?><graphic xlink:href="https://amt.copernicus.org/articles/10/4165/2017/amt-10-4165-2017-f10.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F11" specific-use="star"><caption><p><bold>(a)</bold> Comparison of obtained temperature differences
(<inline-formula><mml:math id="M252" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">B</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">air</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> derived from passive radiance spectra and
measured horizontal sonic temperature differences derived from two
measurement points. The latter is used as estimation for the air temperature
error <inline-formula><mml:math id="M253" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mi mathvariant="normal">T</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. <bold>(b)</bold> The temperature data reveal
measurements resulting in increased relative absorbance errors higher than
20 % due to increased air temperature error <inline-formula><mml:math id="M254" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mtext>T</mml:mtext></mml:msub><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0.4</mml:mn></mml:mrow></mml:math></inline-formula> K and decreased temperature differences <inline-formula><mml:math id="M255" display="inline"><mml:mrow><mml:mo>|</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">B</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">air</mml:mi></mml:msub><mml:mo>|</mml:mo><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> K.</p></caption>
          <?xmltex \igopts{width=412.564961pt}?><graphic xlink:href="https://amt.copernicus.org/articles/10/4165/2017/amt-10-4165-2017-f11.png"/>

        </fig>

      <p>In the case of the Grillenburg experiment the passive radiance spectra were
analyzed in accordance with Harig and Matz (2001) to determine the temperature
difference between background and ambient air. In two spectral regions the
spectra were fitted to the Planck radiation function using a nonlinear
least-squares algorithm. In the spectral range less than 700 cm<inline-formula><mml:math id="M256" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, the
atmosphere is more or less opaque and the spectral data contain the radiation
temperature of the ambient air <inline-formula><mml:math id="M257" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">air</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> in the vicinity of the
spectrometer device. The information on background radiation temperature
<inline-formula><mml:math id="M258" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">B</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> was derived from the spectral region between 850 and
1300 cm<inline-formula><mml:math id="M259" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. The obtained temperature differences (<inline-formula><mml:math id="M260" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">B</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">air</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> were compared to the horizontal temperature variability
derived from 1 min mean values of sonic temperature (acoustic virtual
temperature) measurements, which is used as the presumed
<inline-formula><mml:math id="M261" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mi mathvariant="normal">T</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (Fig. 11).</p>
      <p>For the considered period, more than 90 % of the horizontal sonic
temperature differences at two measurement points are less than 0.4 K.
Furthermore, especially in the nighttime increased absolute values of
temperature differences between background and air (<inline-formula><mml:math id="M262" display="inline"><mml:mrow><mml:mo>|</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">B</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">air</mml:mi></mml:msub><mml:mo>|</mml:mo><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> K) were observed. In these periods relative absorbance
errors less than <inline-formula><mml:math id="M263" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>20 % are achievable. However, in periods around
noontime the passive radiance spectra reveal the thermal equilibrium of
background and air. Hence, these periods are not suitable for further
concentration analysis due to the extreme relative absorbance errors and have
to be disregarded in the further data analysis.</p>
      <p>From the instrumental side, the wavenumber resolution accuracy and the
instrumental line shape or apparatus function describe the influence of
the spectrometer on the measured spectra. Each spectrometer device convolves
the IR intensity due to absorbance effects with this device characteristic
function. The ILS is responsible for distortion of spectra caused by the
finite detector area and finite optical path difference within the
spectrometer. Most of the variation in ILS is driven by the instrumental
resolution and the effective FOV (field of view) due to misalignments of optical components
inside the spectrometer. These doubts in the true ILS of the applied spectrometer
can lead to uncertainties in smoothing of spectral information and later on
in concentration determination errors. Horrocks et al. (2001) estimated a
concentration retrieval error of about 2 % due to an ILS uncertainty by
measuring defined gas concentrations under fixed conditions. However, recent
investigations concerning the sensitivity of OP-FTIR retrievals by Smith et
al. (2011) point out that using a broader spectral feature for concentration
retrieval is suitable for the minimization of the effect of ILS on individual
absorption lines.</p>
      <p>The applied apodization functions (e.g., boxcar, triangular) and the internal
optical path difference mainly control the influence in terms of spectral
resolution. The manufacturer's maintenance specification concerning a wavenumber
accuracy of 13 % at resolution of 4 cm<inline-formula><mml:math id="M264" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> was used to estimate an
instrumental uncertainty based on simulation of absorbance spectra. The
HITRAN Application Programming Interface (HAPI) is a set of Python routines
for the easy access and processing of IR spectroscopic data for different
gases and its isotopologues available in the HITRAN database (Kochanov et al.,
2016). The features of the modular routines provide, among others, the
receipt of the line-by-line data into a local database as well as the
simulation of high-resolution spectra accounting for pressure, temperature,
optical path length, and instrumental settings. The influence of an
uncertainty in wavenumber resolution on absorbance is shown as an example in
Fig. 12. The simulation of the absorbance spectra includes environmental
conditions similar to the Grillenburg experiment (<inline-formula><mml:math id="M265" display="inline"><mml:mrow><mml:mi>T</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">298</mml:mn></mml:mrow></mml:math></inline-formula> K, <inline-formula><mml:math id="M266" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> atm,
CO<inline-formula><mml:math id="M267" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> line concentration <inline-formula><mml:math id="M268" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 40 000 ppm m) and typical instrumental
settings (e.g., triangular apodization function). The obtained relative
absorbance errors <inline-formula><mml:math id="M269" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>A</mml:mi><mml:mo>/</mml:mo><mml:mi>A</mml:mi></mml:mrow></mml:math></inline-formula> range between 2 and 6.5 %.</p>
      <p>Based on the previous data evaluation, the absorbance spectra of the
nighttime period from 10 to 11 July showed reasonable absorbance errors smaller than
20 % and were chosen for the subsequent quantitative analysis (Fig. 11b).
This period covered an interval of 9.5 h and included 108 spectra for each
measured optical path direction. The concentration retrieval is based on
chemometric techniques applied to the absorbance spectra deriving spectral
properties which are related to quantitative information. It included the
usage of least-squares fitting comparing parts of the measured absorbance
spectra with simulated reference spectra. The algorithm has been previously well
described for instance by Griffiths and de Haseth (2007) and Smith et
al. (2011). Reference IR spectra including instrumental line shape were
generated by using the HAPI routines (Kochanov et al., 2016). Additional
Python routines were designed for the selection of spectral windows and the
comparison of measured and simulated spectra based on the classical
least-squares approach (CLS) as a straightforward algorithm (Shao et al.,
2010). Currently, different retrieval methods to obtain concentration values
from measured spectra are available (e.g., CLS and PLS). Smith et al. (2011) observed an increasing underestimation
of the CLS-based method at higher path lengths. However, for the Grillenburg
experimental setup the optical path lengths and the expected line
concentrations were sufficiently low to use a CLS-based retrieval approach
neglecting the Beer–Lambert law nonlinearity.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F12"><caption><p>Example of simulated CO<inline-formula><mml:math id="M270" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> absorbance spectra (line concentration
40 000 ppm m, <inline-formula><mml:math id="M271" display="inline"><mml:mrow><mml:mi>T</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">298</mml:mn></mml:mrow></mml:math></inline-formula> K, <inline-formula><mml:math id="M272" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> atm) for wavenumber region
700–800 cm<inline-formula><mml:math id="M273" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. The relative absorbance error <inline-formula><mml:math id="M274" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>A</mml:mi><mml:mo>/</mml:mo><mml:mi>A</mml:mi></mml:mrow></mml:math></inline-formula> for a known
uncertainty in wavenumber resolution accuracy given by the manufacturer's
specifications is in the range between 2 and 6.5 %. Besides the wavenumber
accuracy, the applied apodization function (here triangular) also affects the
relative absorbance error.</p></caption>
          <?xmltex \igopts{width=219.08622pt}?><graphic xlink:href="https://amt.copernicus.org/articles/10/4165/2017/amt-10-4165-2017-f12.png"/>

        </fig>

      <p>A spectral window ranging from 700 to 760 cm<inline-formula><mml:math id="M275" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> was used for the
determination of CO<inline-formula><mml:math id="M276" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> line concentrations due to the significant
absorbance feature of CO<inline-formula><mml:math id="M277" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> molecules within this wavenumber region. The
quantitative accuracy was determined from fit residuals of the calculated and
measured absorbance spectra. Only measurements with valid fitting errors
smaller than 3 % were defined as acceptable for further data analysis.</p>
      <p>For the Grillenburg experiment the maximum uncertainty for CO<inline-formula><mml:math id="M278" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
concentration determination from passive OP-FTIR measurements was estimated
based on the considered systematic influences due to environmental
parameters, instrumental characteristics, and retrieval procedure with a
total amount of approximately 30 % for a single measurement. This value for
total uncertainty seems to be high compared to active OP-FTIR investigations
(Horrocks et al., 2001; Smith et al., 2011). The uncertainty in the temperature
difference between background and considered atmospheric gas compound could
be identified as the main error source for the passive measurements, and a
threshold of 2 K for data filtering was defined. In summary, the total
uncertainty represents the maximum error estimation, which is valuable for the
validation of the method in terms of applicability to determine spatial
concentration variations for the micrometeorological investigations addressed
by this study. The estimated range of maximum concentration uncertainty for
our experiment was confirmed by other passive OP-FTIR investigations (e.g.,
Allard et al., 2005; Sulub and Small, 2007; Kira et al., 2015). However, most
of these studies are based on hot gases with high temperature contrasts
between background and target gas compounds (volcanic gases, exhaust gases)
or on the determination of non-atmospheric GHGs (industrial gases,
aerosols).</p>
</sec>
<sec id="Ch1.S4.SS3">
  <title>Applicability of combined A-TOM and OP-FTIR measurements</title>
      <p>At this point, the uncertainties of the two methods, A-TOM and OP-FTIR, are
known. Single, instantaneous values of wind components, measured by A-TOM,
can be derived with an uncertainty of 0.3 m s<inline-formula><mml:math id="M279" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for the described
setup of the Grillenburg experiment (height of 1.5 m above ground and path
lengths of 50 m). After averaging over a time period of 30 min the
statistical uncertainty amounts to about 0.03 m s<inline-formula><mml:math id="M280" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>.</p>
      <p>The wind component in <inline-formula><mml:math id="M281" display="inline"><mml:mi>x</mml:mi></mml:math></inline-formula> direction, <inline-formula><mml:math id="M282" display="inline"><mml:mi>u</mml:mi></mml:math></inline-formula>, was calculated as a spatial mean
along the two paths between the measurement positions ATOM1 and ATOM4 as well
as ATOM2 and ATOM3 (see Fig. 1). The sound path between ATOM1 and ATOM4 is
parallel to the optical path R72–R73 of OP-FTIR measurements. The
perpendicular wind component <inline-formula><mml:math id="M283" display="inline"><mml:mi>v</mml:mi></mml:math></inline-formula> was derived by averaging the line-integrated
wind measurements between ATOM1 and ATOM2 as well as ATOM4 and ATOM3
(parallel to OP-FTIR path R72–Black4).</p>
      <p>Figure 13a shows that the wind speed was relatively small during the
investigated nighttime example in July 2016 at the FLUXNET site Grillenburg.
Furthermore, after midnight the wind speed steadily fell to mean
values smaller than 1 m s<inline-formula><mml:math id="M284" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F13"><caption><p>Averaged (30 min) data: <bold>(a)</bold> horizontal wind speed at a
height of 1.5 m measured by A-TOM and with maximum uncertainties;
<bold>(b)</bold> vertical gradient (3–1.5 m) of acoustic virtual temperature
measured by sonic anemometers (Young1–2 see Fig. 1) and by A-TOM as spatial
mean (50 <inline-formula><mml:math id="M285" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 50 m<inline-formula><mml:math id="M286" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula>).</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://amt.copernicus.org/articles/10/4165/2017/amt-10-4165-2017-f13.png"/>

        </fig>

      <p>These low wind conditions near the surface during a clear night were
supported by a stably stratified atmosphere. Figure 13b determines a
positive vertical temperature gradient during all nighttime hours.</p>
      <p>Between 03:00 and 05:00 CET a
noticeably high value of the temperature gradient occurs together with very
small wind speed values and a changing wind direction shortly before the
onset of this sharp increase in stability. As a result, the A-TOM measurements show
a similar behavior in comparison to the measurements using sonic
anemometers. Mostly, the spatially averaged data are similar to all point
data. However, there are greater differences between the data from sonic
anemometers especially during times of high vertical gradients and times of
highly variable gradients.</p>
      <p>Absolute CO<inline-formula><mml:math id="M287" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentrations, measured by OP-FTIR, are estimated with a
maximum uncertainty of 30 % for a single measurement. Considering the
application of averaging over a period of 30 min, the standard error of the
mean values can be decreased at least by a factor <inline-formula><mml:math id="M288" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:msqrt><mml:mn mathvariant="normal">4</mml:mn></mml:msqrt><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula>,
because not all single data values could be used for further analysis.
Recognizing the time-dependent (i.e., concentration-dependent) calculation of
uncertainty in Sect. 4.2, the single measurement uncertainty amounts to a
maximum value between 20 and 30 %. Based on the recalculation of
relative error into absolute error values including the averaging time of 30 min and
only considering all nighttime measurements, an averaged statistical
uncertainty of approximately 70 ppm results. Smaller values of uncertainty
can be obtained for smaller concentrations. Values with a determined
uncertainty greater than 30 % are excluded from further analysis.
As a result, example concentrations along the two paths between the measurement
positions (see Fig. 1) R72–Black4 (distance: 100 m) and R72–R73 (80 m)
were analyzed. Figure 14a shows the temporal and spatial differences of
CO<inline-formula><mml:math id="M289" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentrations along the two mentioned optical paths at the
FLUXNET site Grillenburg during nighttime measurements. Again, the special time
period around 04:00 o'clock stands out with comparably higher
concentrations accompanied by significant spatial differences.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F14"><caption><p>Averaged (30 min) CO<inline-formula><mml:math id="M290" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration measured by
<bold>(a)</bold> OP-FTIR at perpendicular paths at a height of about 1.0 m above
ground, which is representative for total investigation area with vertical extent due
to field of view, and with maximum uncertainties; <bold>(b)</bold> EC station at
a height of 3.0 m by two soil respiration chambers at the ground surface
(SC1–2: horizontal distance between the chambers 5 m); and vertical
temperature gradient measured by A-TOM (3.0–1.5 m).</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://amt.copernicus.org/articles/10/4165/2017/amt-10-4165-2017-f14.png"/>

        </fig>

      <p>The temporal and spatial variability in CO<inline-formula><mml:math id="M291" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration determined by
OP-FTIR was compared to the results of the measurements taken by EC station
(3 m above ground) and soil respiration chamber (SC) measurements at ground
surface (Fig. 14b). Obviously, a distinct similarity in concentration time
series is observable for all measurements, but there are also significant
differences concerning measured amplitudes of CO<inline-formula><mml:math id="M292" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration. The
point measurements (SC and EC data)
underlined the present variability in
horizontal as well as in vertical distribution, which is also perceptible in OP-FTIR
data. Furthermore, the chamber measurements at ground surface illustrated the
increased spatial variability in CO<inline-formula><mml:math id="M293" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration during nighttime
caused by soil respiration processes. Despite the spatial proximity of the
two chambers to the EC tower, there are obviously differences in the soil
respiration data as well as distinct differences in the temporal
behavior, considering the comparison to the EC data. This spatial
heterogeneity in soil flux for a grassland site can be caused by the
variability in soil moisture, changes in soil fauna composition, and the
amount of above-ground biomass (Davidson et al., 2002; Rodeghiero and
Cescatti, 2008; Darenova et al., 2016). The data of the Grillenburg experiment
supports the approach of combined line-averaging and point measurements:
OP-FTIR measurements provided path-integrated values covering assumed spatial
concentration variability in a single measurement and yielded spatially
averaged concentration values. However, a certainly limited comparability
between results of point sensor and line-averaging measurements is expected
due to the different volumes considered by the different methodical
approaches and due to the effect of undersampling caused by the heavily
limited number of point sensors.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F15"><caption><p>Averaged (30 min) spatial difference in CO<inline-formula><mml:math id="M294" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration
(OP-FTIR) and horizontal advection (A-TOM, OP-FTIR) at a height of about
1.5 m; vertical gradient (3.0–1.5 m) of acoustic virtual temperature
(A-TOM) and CO<inline-formula><mml:math id="M295" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> flux at a height of 3.0 m (EC).</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://amt.copernicus.org/articles/10/4165/2017/amt-10-4165-2017-f15.png"/>

        </fig>

      <p>In the next step of the analyses, the horizontal advection and its uncertainty
were calculated. As a result, an adapted form of Eq. (2) was applied according to
the analyzed results so far:
            <disp-formula id="Ch1.E25" content-type="numbered"><mml:math id="M296" display="block"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mi mathvariant="normal">Hor</mml:mi></mml:msub><mml:mo>≈</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msub><mml:mi>V</mml:mi><mml:mi mathvariant="normal">m</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mfenced close=")" open="("><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>v</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mover accent="true"><mml:mi>c</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>d</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>z</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
          To roughly estimate the spatial concentration differences within the
investigated area inside the square R72–Black4–Black2–R73, two
line-integrated concentrations and their difference were used: R72–Black4
and R72–R73. Because these two paths are perpendicular and include the total
acoustic measurement area, the horizontal wind speed <inline-formula><mml:math id="M297" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">v</mml:mi><mml:mtext>h</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> was
used in Eq. (25) instead of the wind components <inline-formula><mml:math id="M298" display="inline"><mml:mi>u</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M299" display="inline"><mml:mi>v</mml:mi></mml:math></inline-formula>. In this way,
Eq. (25) gives an estimation of the spatially averaged and representative
horizontal advection at the FLUXNET site Grillenburg.</p>
      <p>To derive the maximum uncertainty in horizontal advection at a certain height
level above ground, the error propagation law is then applied to Eq. (24)
with <inline-formula><mml:math id="M300" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>d</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">100</mml:mn></mml:mrow></mml:math></inline-formula> m for an averaged difference in distance:

                <disp-formula specific-use="align" content-type="numbered"><mml:math id="M301" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>F</mml:mi><mml:mi mathvariant="normal">Hor</mml:mi></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msub><mml:mi>V</mml:mi><mml:mi mathvariant="normal">m</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mfenced open="(" close=")"><mml:mfenced close="|" open="|"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mover accent="true"><mml:mi>c</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>d</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mi mathvariant="normal">Δ</mml:mi><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>v</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:mfenced close="|" open="|"><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>v</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mfenced><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">Δ</mml:mi><mml:mover accent="true"><mml:mi>c</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>d</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>z</mml:mi></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msub><mml:mi>V</mml:mi><mml:mi mathvariant="normal">m</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mfenced close="" open="("><mml:mfenced open="|" close="|"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mover accent="true"><mml:mi>c</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>d</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mfenced close=")" open="("><mml:mfenced open="|" close="|"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mover accent="true"><mml:mi>u</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>v</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mfrac></mml:mstyle></mml:mfenced><mml:mi mathvariant="normal">Δ</mml:mi><mml:mover accent="true"><mml:mi>u</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:mfenced open="|" close="|"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mover accent="true"><mml:mi>v</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>v</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mfrac></mml:mstyle></mml:mfenced><mml:mi mathvariant="normal">Δ</mml:mi><mml:mover accent="true"><mml:mi>v</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mfenced></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="Ch1.E26"><mml:mtd/><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mfenced open="." close=")"><mml:mo>+</mml:mo><mml:mfenced open="|" close="|"><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>v</mml:mi><mml:mi mathvariant="normal">h</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mfenced><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">Δ</mml:mi><mml:mover accent="true"><mml:mi>c</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>d</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>z</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

            As a result, it is assumed that the uncertainty in path length (<inline-formula><mml:math id="M302" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>d</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>
estimations and layer thickness (<inline-formula><mml:math id="M303" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>z</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> determination is negligible in
comparison to the uncertainties of wind components and spatial concentration
differences. It should be noted that the concentration error for a
measurement along one optical path counts twice in the term <inline-formula><mml:math id="M304" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">Δ</mml:mi><mml:mover accent="true"><mml:mi>c</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:math></inline-formula> due to the spatial difference in concentrations <inline-formula><mml:math id="M305" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mover accent="true"><mml:mi>c</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:math></inline-formula>. This behavior results in relatively large values of the last
term in Eq. (26), at least one magnitude larger than the first term, which
accounts for the wind uncertainty.</p>
      <p>A value of 22.414 <inline-formula><mml:math id="M306" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<inline-formula><mml:math id="M307" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> m<inline-formula><mml:math id="M308" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:math></inline-formula> mol<inline-formula><mml:math id="M309" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> was applied for
the molar volume of dry air <inline-formula><mml:math id="M310" display="inline"><mml:mrow><mml:msub><mml:mi>V</mml:mi><mml:mi mathvariant="normal">m</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. The vertical layer thickness
<inline-formula><mml:math id="M311" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>z</mml:mi></mml:mrow></mml:math></inline-formula> is mainly influenced by the field of view of the OP-FTIR
measurements (see Table 1). Assuming an averaged vertical layer of 0.25 m
and using Eq. (26), maximum uncertainties of
3–38 <inline-formula><mml:math id="M312" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol m<inline-formula><mml:math id="M313" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M314" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> were derived. In light of temporary
great values of horizontal advection and including the spatially averaging
and expanding effects of the method, the uncertainties are reasonable.
Nevertheless, there are several possibilities for further development of the
combined method which will be discussed in Sect. 5.</p>
      <p>Figure 15 shows the resulting estimation of horizontal advection at a height
of 1.5 m above ground, which is representative for the total investigation area of
approximately 120 m <inline-formula><mml:math id="M315" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 120 m and a vertical extent of 0.25 m due to the
field of view of optical measurements. The spatial gradient derived from the
spatial difference in CO<inline-formula><mml:math id="M316" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentrations is the factor which decides the
sign of advection because the wind speed is always positive. In this way, the
sign of advection is a bit arbitrary.</p>
      <p>The temporal behavior of advection is generally connected with that of
the spatial concentration difference, but it is modulated by the wind speed.
Mostly, the temporal variability in advection is coupled with the temperature
gradient until 03:00 o'clock. During this first time period, the course of
advection and atmospheric stability is similar: increasing stability occurs
together with increasing advection and vice versa. The turbulent CO<inline-formula><mml:math id="M317" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
flux frequently demonstrates a similar behavior. During the following time
period, the wind turns, wind speed decreases, atmospheric stability increases
remarkably, and EC flux also increases. It should be noted that EC fluxes
during such low wind conditions should be treated with high caution (e.g.,
Aubinet et al., 2012). In comparison to that, the advection decreases sharply
after 04:00 o'clock. This event is coupled with the rising near-surface
concentration of CO<inline-formula><mml:math id="M318" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> measured by the soil respiration chambers and to
a lesser extent by the EC system (Fig. 14b) shortly after reaching the maximum
of the temperature gradient. The changing wind direction probably leads to
another upstream source region for CO<inline-formula><mml:math id="M319" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>. The estimation of the source
area (also applying the boundary layer model HIRVAC) is a remaining task of
the SQuAd project.</p>
</sec>
</sec>
<sec id="Ch1.S5" sec-type="conclusions">
  <title>Conclusions and outlook</title>
      <p>To close the known gap within energy balance which affects the CO<inline-formula><mml:math id="M320" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
balance determinations, there is still a considerable requirement for
adequate advection measurements. Up to now, there have been many measurements
approximating the required quantities between points at selected transects.
It has been shown that especially more detailed spatial information about
flow properties and CO<inline-formula><mml:math id="M321" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> distribution in the control volume would be
necessary (Feigenwinter et al., 2008). Ground-based remote sensing
techniques can provide spatially representative CO<inline-formula><mml:math id="M322" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration
values together with wind components within the same voxel structure. For
this purpose, the presented SQuAd approach applies an integrated method
combination of line-averaging acoustic tomography to measure wind components
together with open-path Fourier-transform infrared spectroscopy to derive
spatially integrated CO<inline-formula><mml:math id="M323" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentrations.</p>
      <p>The derived values of mean advection around
10 <inline-formula><mml:math id="M324" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol m<inline-formula><mml:math id="M325" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M326" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (and sometimes higher) seem to be
comparatively high (e.g., Zeri et al., 2010). Similar values of about
50 <inline-formula><mml:math id="M327" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol m<inline-formula><mml:math id="M328" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M329" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for advection as well as CO<inline-formula><mml:math id="M330" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
gradients of 1 <inline-formula><mml:math id="M331" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol mol<inline-formula><mml:math id="M332" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> m<inline-formula><mml:math id="M333" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> were detected in more
complex environments in regard to topography and vegetation cover (Feigenwinter
et al., 2010). In this respect our results at a relatively flat grassland site
and using the line-averaging methods are worthy of discussions. As a result, the
different measurement volumes of point-like (measurements based on EC and SC)
and line-averaging measurement methods (OP-FTIR, A-TOM) should be taken into
account. We observed higher concentration values from spatially integrating
and representative measurements in comparison to point measurements which
could be affected by undersampling of real-world fluxes (Siebicke et al.,
2011) and near-ground CO<inline-formula><mml:math id="M334" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentration variability, too. The
environmental factors driving the spatial variability in soil CO<inline-formula><mml:math id="M335" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> fluxes
are still poorly understood (Rodeghiero and Cescatti, 2008). Variability in
physical soil properties (e.g., soil moisture, clay content), disturbances in
soil fauna, and the amount of above-ground biomass can produce spatial soil
respiration heterogeneity also within a more or less homogeneous look-alike
grassland site (Davidson et al., 2002; Darenova et al., 2016). Hence, the
spatial determination of GHG concentrations only based on point information
requires an optimized vertically and horizontally distributed instrumental
setup of point sensors. This is necessary for a representative site
characterization avoiding the undersampling of the complex flow phenomena.
Hence, the overarching application of line-averaging measurements can help to
overcome the limitations of distributed single sensors providing integrative
spatial data across an extended path less affected by local unrepresentative
fluctuations. Furthermore, the shown example results were measured near the
ground during stable stratification with remarkable amounts of temperature
gradient as well as during low wind conditions. Several authors, e.g., Sun et
al. (2007), Kutsch et al. (2008), and Siebicke et al. (2012), found maximum
advection during such conditions especially near the ground surface
(Feigenwinter et al., 2008). The analysis of further data sets with
additional concentration measurements and for additional time periods should
confirm the derived results so far and the possibility of applying spatially
averaging methods to measure advection of CO<inline-formula><mml:math id="M336" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>.</p>
      <p>To demonstrate the applicability of the SQuAd approach, the estimation of
uncertainties of the used measurement and analysis methods was the focus
of attention. As a result, it is important to note that we applied a maximum
error calculation of the used methods A-TOM and passive OP-FTIR to be on the
safe side for further applications. The received values of uncertainties
(0.3 m s<inline-formula><mml:math id="M337" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for wind components and 30 % for concentration of
instantaneous data without averaging) are always greater in comparison to an
investigation of purely statistical uncertainties, i.e., random errors which
are usually described by the standard deviations of high-frequency
measurements (e.g., Marcolla et al., 2014; Aubinet et al., 2003).</p>
      <p>Nevertheless, there are still possibilities to further decrease these
uncertainties. As a result, the data analysis of CO<inline-formula><mml:math id="M338" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentrations will
focus on all other optical paths of the passive OP-FTIR measurements as well
as on the active OP-FTIR data. The generated data redundancies will enhance
the security of measurement results. In this way, the presented estimation
of maximum uncertainty will be reduced to smaller values which are typical
for micrometeorological applications. Additionally, a higher frequency of
measurements would decrease the statistical uncertainty of both methods,
A-TOM and passive OP-FTIR.</p>
      <p><?xmltex \hack{\newpage}?>Further tests to improve the accuracy of the applied OP-FTIR method will
focus on an increasing temperature gradient between background and target
gas as well as the determination of the influence of FOV on horizontal and
vertical resolution. The integral concentration value based on spectral
information along the optical path includes a smearing effect caused by the
true FOV. Especially for longer pathways and increased horizontal
concentration gradients, this effect has to be taken into account.
Furthermore, slight misalignments can result in decreased data quality due
to an unpredictable uncertainty in effectively considered path lengths and
background radiations.</p>
      <p>At the expense of temporal resolution and assuming stronger concentration
differences between background and the searched air volume, the spatial
resolution of the OP-FTIR method can be further enhanced by measuring along
a higher number of paths. In a similar way it is possible to increase the
number of acoustic paths through the control volume. The results from a high
number of optical and acoustic paths can be used to apply a tomographic
algorithm and to reconstruct spatially resolved wind and concentration
fields.</p>
      <p>The presented SQuAd approach offers the possibility to complement previous
findings of multilocation, point-like measurements. Thomas (2011) found
fundamental differences in the space–time structure of the motions
dominating the variability in the wind and temperature fields. This scale
mismatch complicates the derivation of meaningful estimates of horizontal
advective fluxes without dense spatial information. The SQuAd approach could
be applied to provide the necessary spatially representative data. As a result,
one advantage of the A-TOM and OP-FTIR method is the combined measurement of wind
components and temperature together with several GHGs along similar paths
and air volumes.</p>
      <p>Although there are remaining tasks concerning the improvement of combined
measurement methods within the SQuAd approach, the present study provides
first examples of the application of the new method to estimate a spatially
representative advection during calm and stably stratified nighttime
conditions at a grassland site.</p>
</sec>

      
      </body>
    <back><notes notes-type="dataavailability">

      <p>Data are available upon request by contacting the corresponding author.
The data sets will be freely available on servers after finishing
all analyses within the SQuAd project. Please follow the updates on the
project web sites for access information:
<uri>https://tu-dresden.de/bu/umwelt/hydro/ihm/meteorologie/forschung/forschungsprojekte/spatial/index</uri>.</p>
  </notes><?xmltex \hack{\clearpage}?><app-group>

<app id="App1.Ch1.S1">
  <title/>
      <p>Using the assumption of reciprocal sound propagation (see Eqs. 11 and 12), the uncertainty in the acoustic virtual temperature <inline-formula><mml:math id="M339" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and wind component along sound path <inline-formula><mml:math id="M340" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>v</mml:mi><mml:mi mathvariant="normal">Ray</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> can be derived:

              <disp-formula specific-use="align" content-type="numbered"><mml:math id="M341" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mfenced open="(" close=")"><mml:mfenced close="|" open="|"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>d</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>d</mml:mi></mml:mfenced><mml:mo>+</mml:mo><mml:mfenced open="(" close=")"><mml:mfenced close="|" open="|"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mi mathvariant="normal">forth</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mi mathvariant="normal">forth</mml:mi></mml:msub></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="App1.Ch1.E1"><mml:mtd/><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>+</mml:mo><mml:mfenced close=")" open="("><mml:mfenced close="|" open="|"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mi mathvariant="normal">back</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mi mathvariant="normal">back</mml:mi></mml:msub></mml:mfenced><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mtext>and</mml:mtext></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mtr><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>v</mml:mi><mml:mi mathvariant="normal">Ray</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mfenced close=")" open="("><mml:mfenced open="|" close="|"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>v</mml:mi><mml:mi mathvariant="normal">Ray</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>d</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>d</mml:mi></mml:mfenced><mml:mo>+</mml:mo><mml:mfenced open="(" close=")"><mml:mfenced close="|" open="|"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>v</mml:mi><mml:mi mathvariant="normal">Ray</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mi mathvariant="normal">forth</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mi mathvariant="normal">forth</mml:mi></mml:msub></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="App1.Ch1.E2"><mml:mtd/><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>+</mml:mo><mml:mfenced close=")" open="("><mml:mfenced open="|" close="|"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>v</mml:mi><mml:mi mathvariant="normal">Ray</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mi mathvariant="normal">back</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mi mathvariant="normal">back</mml:mi></mml:msub></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

          Differential measurements outgoing from a known initial state increase the
accuracy because errors of the path length measurement can be compensated. Assuming <inline-formula><mml:math id="M342" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>d</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>, Eqs. (A1) and (11) can be combined to get Eg. (A3):

              <disp-formula specific-use="align" content-type="numbered"><mml:math id="M343" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>=</mml:mo><mml:mfenced close=")" open="("><mml:mfenced close="|" open="|"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mtext>forth</mml:mtext></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mtext>forth</mml:mtext></mml:msub></mml:mfenced><mml:mo>+</mml:mo><mml:mfenced close=")" open="("><mml:mfenced close="|" open="|"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mtext>back</mml:mtext></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mtext>back</mml:mtext></mml:msub></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msub><mml:mi mathvariant="italic">γ</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub><mml:msub><mml:mi>R</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msup><mml:mi>d</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mtext>forth</mml:mtext></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mtext>back</mml:mtext></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="App1.Ch1.E3"><mml:mtd/><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">τ</mml:mi><mml:mtext>forth</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:mfrac></mml:mstyle><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mtext>forth</mml:mtext></mml:msub><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">τ</mml:mi><mml:mtext>back</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:mfrac></mml:mstyle><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mtext>back</mml:mtext></mml:msub></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

          <?xmltex \hack{\newpage}?><?xmltex \hack{\noindent}?>Assuming that travel-time errors along the same path in opposite
directions (back and forth) are identical to <inline-formula><mml:math id="M344" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="italic">τ</mml:mi></mml:mrow></mml:math></inline-formula>, the temperature
uncertainty from Eq. (A3) can be written:

              <disp-formula specific-use="align" content-type="numbered"><mml:math id="M345" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msub><mml:mi mathvariant="italic">γ</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub><mml:msub><mml:mi>R</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msup><mml:mi>d</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="italic">τ</mml:mi><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:msqrt><mml:mrow><mml:msub><mml:mi mathvariant="italic">γ</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub><mml:msub><mml:mi>R</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub></mml:mrow></mml:msqrt></mml:mrow><mml:mi>d</mml:mi></mml:mfrac></mml:mstyle></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="App1.Ch1.E4"><mml:mtd/><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mfenced open="(" close=")"><mml:msub><mml:mi mathvariant="italic">γ</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub><mml:msub><mml:mi>R</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">av</mml:mi></mml:msub></mml:mfenced><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msubsup><mml:mi>v</mml:mi><mml:mi mathvariant="normal">Ray</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow><mml:mrow><mml:msup><mml:mi>d</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

          The uncertainty in relative wind measurements only depends on the
uncertainty in travel-time measurements:

              <disp-formula specific-use="align" content-type="numbered"><mml:math id="M346" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>v</mml:mi><mml:mi mathvariant="normal">Ray</mml:mi></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>=</mml:mo><mml:mfenced open="(" close=")"><mml:mfenced open="|" close="|"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>v</mml:mi><mml:mi mathvariant="normal">Ray</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mtext>forth</mml:mtext></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mtext>forth</mml:mtext></mml:msub></mml:mfenced><mml:mo>+</mml:mo><mml:mfenced open="(" close=")"><mml:mfenced close="|" open="|"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>v</mml:mi><mml:mi mathvariant="normal">Ray</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mtext>back</mml:mtext></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mtext>back</mml:mtext></mml:msub></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="App1.Ch1.E5"><mml:mtd/><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>d</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">τ</mml:mi><mml:mtext>forth</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:mfrac></mml:mstyle><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mtext>forth</mml:mtext></mml:msub><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">τ</mml:mi><mml:mtext>back</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:mfrac></mml:mstyle><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mtext>back</mml:mtext></mml:msub></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula></p><?xmltex \hack{\clearpage}?>
</app>
  </app-group><notes notes-type="authorcontribution">

      <p>AZ and MS are responsible for A-TOM and CS for OP-FTIR. All authors designed the SQuAd campaign and
carried out the experiment. The overall coordination was carried out by AZ.
MS developed and performed the code for controlling A-TOM and analyzing
acoustical data. CS developed and performed the code for controlling OP-FTIR
and analyzing optical data. AZ prepared the joint data analysis of A-TOM,
sonic, and EC data together with the uncertainty calculation of line-averaged
wind components (A-TOM). CS prepared the line-averaged concentration data
(OP-FTIR) with an uncertainty analysis. AZ prepared the manuscript with
contributions from all co-authors.</p>
  </notes><notes notes-type="competinginterests">

      <p>The authors declare that they have no conflict of
interest.</p>
  </notes><ack><title>Acknowledgements</title><p>At first we want to thank our project partner Christian Bernhofer (Chair of
Meteorology, TU Dresden) for the initial idea for the project, providing
staff, and the equipped experimental site Grillenburg. We sincerely thank
Armin Raabe (Leipzig Institute for Meteorology, University of Leipzig) for
the quick and easy loan of acoustic devices for A-TOM. Many thanks are going to
Markus Hehn, Valeri Goldberg, Uwe Eichelmann, Heiko Prasse (Chair of
Meteorology, TU Dresden), Andreas Schoßland, and Uta Sauer (Helmholtz
Centre for Environmental Research Leipzig) for their support during
the preparation and implementation of the experiment.</p><p>We are grateful to the referees for their constructive input.</p><p>This work was supported by the German Research Foundation (DFG) (grant
numbers ZI 623/10-1, SCHU 1428/3-1).<?xmltex \hack{\newline}?><?xmltex \hack{\newline}?> Edited
by: Dietrich G. Feist<?xmltex \hack{\newline}?> Reviewed by: two anonymous referees</p></ack><ref-list>
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    <!--<article-title-html>Line-averaging measurement methods to estimate the gap in the CO<sub>2</sub> balance closure – possibilities, challenges, and uncertainties</article-title-html>
<abstract-html><p class="p">An imbalance of surface energy fluxes using the eddy covariance (EC) method
is observed in global measurement networks although all necessary corrections
and conversions are applied to the raw data. Mainly during nighttime,
advection can occur, resulting in a closing gap that consequently should also
affect the CO<sub>2</sub> balances. There is the crucial need for representative
concentration and wind data to measure advective fluxes. Ground-based remote
sensing techniques are an ideal tool as they provide the spatially
representative CO<sub>2</sub> concentration together with wind components within
the same voxel structure. For this purpose, the presented SQuAd (Spatially
resolved Quantification of the Advection influence on the balance closure of
greenhouse gases) approach applies an integrated method combination of
acoustic and optical remote sensing. The innovative combination of acoustic
travel-time tomography (A-TOM) and open-path Fourier-transform infrared
spectroscopy (OP-FTIR) will enable an upscaling and enhancement of EC
measurements. OP-FTIR instrumentation offers the significant advantage of
real-time simultaneous measurements of line-averaged concentrations for
CO<sub>2</sub> and other greenhouse gases (GHGs). A-TOM is a scalable method to
remotely resolve 3-D wind and temperature fields. The paper will give an
overview about the proposed SQuAd approach and first results of experimental
tests at the FLUXNET site Grillenburg in Germany.</p><p class="p">Preliminary results of the comprehensive experiments reveal a mean nighttime
horizontal advection of CO<sub>2</sub> of about
10 µmol m<sup>−2</sup> s<sup>−1</sup> estimated by the spatially integrating
and representative SQuAd method. Additionally, uncertainties in determining
CO<sub>2</sub> concentrations using passive OP-FTIR and wind speed applying A-TOM
are systematically quantified. The maximum uncertainty for CO<sub>2</sub>
concentration was estimated due to environmental parameters, instrumental
characteristics, and retrieval procedure with a total amount of approximately
30 % for a single measurement. Instantaneous wind components can be
derived with a maximum uncertainty of 0.3 m s<sup>−1</sup> depending on sampling,
signal analysis, and environmental influences on sound propagation. Averaging
over a period of 30 min, the standard error of the mean values can be
decreased by a factor of at least 0.5 for OP-FTIR and 0.1 for A-TOM depending
on the required spatial resolution. The presented validation of the joint
application of the two independent, nonintrusive methods is in the focus of
attention concerning their ability to quantify advective fluxes.</p></abstract-html>
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