<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing with OASIS Tables v3.0 20080202//EN" "journalpub-oasis3.dtd">
<article xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:oasis="http://docs.oasis-open.org/ns/oasis-exchange/table" xml:lang="en" dtd-version="3.0">
  <front>
    <journal-meta><journal-id journal-id-type="publisher">AMT</journal-id><journal-title-group>
    <journal-title>Atmospheric Measurement Techniques</journal-title>
    <abbrev-journal-title abbrev-type="publisher">AMT</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Atmos. Meas. Tech.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1867-8548</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/amt-11-3021-2018</article-id><title-group><article-title>Is it feasible to estimate radiosonde biases from<?xmltex \hack{\break}?> interlaced measurements?</article-title><alt-title>Estimating the difference in instrument bias</alt-title>
      </title-group><?xmltex \runningauthor{S.~Kremser et al.}?><?xmltex \runningtitle{Estimating the difference in instrument bias}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Kremser</surname><given-names>Stefanie</given-names></name>
          <email>stefanie@bodekerscientific.com</email>
        <ext-link>https://orcid.org/0000-0002-3573-7083</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2 aff3">
          <name><surname>Tradowsky</surname><given-names>Jordis S.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-9059-4292</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Rust</surname><given-names>Henning W.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Bodeker</surname><given-names>Greg E.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-1094-5852</ext-link></contrib>
        <aff id="aff1"><label>1</label><institution>Bodeker Scientific, 42 Russell Street, Alexandra, New Zealand</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Institute for Meteorology, Freie Universität Berlin, Carl-Heinrich-Becker Weg 6–10, Berlin, Germany</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>National Institute of Water and Atmospheric Research, Lauder, New Zealand</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Stefanie Kremser (stefanie@bodekerscientific.com)</corresp></author-notes><pub-date><day>24</day><month>May</month><year>2018</year></pub-date>
      
      <volume>11</volume>
      <issue>5</issue>
      <fpage>3021</fpage><lpage>3029</lpage>
      <history>
        <date date-type="received"><day>7</day><month>January</month><year>2018</year></date>
           <date date-type="accepted"><day>3</day><month>May</month><year>2018</year></date>
           <date date-type="rev-recd"><day>24</day><month>April</month><year>2018</year></date>
           <date date-type="rev-request"><day>31</day><month>January</month><year>2018</year></date>
      </history>
      <permissions>
        
        
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://amt.copernicus.org/articles/11/3021/2018/amt-11-3021-2018.html">This article is available from https://amt.copernicus.org/articles/11/3021/2018/amt-11-3021-2018.html</self-uri><self-uri xlink:href="https://amt.copernicus.org/articles/11/3021/2018/amt-11-3021-2018.pdf">The full text article is available as a PDF file from https://amt.copernicus.org/articles/11/3021/2018/amt-11-3021-2018.pdf</self-uri>
      <abstract>
    <p id="d1e123">Upper-air measurements of essential climate variables (ECVs), such as
temperature, are crucial for climate monitoring and climate change detection.
Because of the internal variability of the climate system, many decades of
measurements are typically required to robustly detect any trend in the
climate data record. It is imperative for the records to be temporally
homogeneous over many decades to confidently estimate any trend.
Historically, records of upper-air measurements were primarily made for
short-term weather forecasts and as such are seldom suitable for studying
long-term climate change as they lack the required continuity and
homogeneity. Recognizing this, the Global Climate Observing System (GCOS)
Reference Upper-Air Network (GRUAN) has been established to provide
reference-quality measurements of climate variables, such as temperature,
pressure, and humidity, together with well-characterized and traceable
estimates of the measurement uncertainty. To ensure that GRUAN data products
are suitable to detect climate change, a scientifically robust instrument
replacement strategy must always be adopted whenever there is a change in
instrumentation. By fully characterizing any systematic differences between
the old and new measurement system a temporally homogeneous data series can
be created. One strategy is to operate both the old and new instruments in
tandem for some overlap period to characterize any inter-instrument biases.
However, this strategy can be prohibitively expensive at measurement sites
operated by national weather services or research institutes. An alternative
strategy that has been proposed is to alternate between the old and new
instruments, so-called interlacing, and then statistically derive the
systematic biases between the two instruments. Here we investigate the
feasibility of such an approach specifically for radiosondes, i.e. flying the
old and new instruments on alternating days. Synthetic data sets are used to
explore the applicability of this statistical approach to radiosonde change
management.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><caption><p id="d1e130"><bold>(a)</bold> Monthly temperature anomalies (smoothed with a 13-point
running mean) during 1958–2009 from radiosonde
observations at Camborne, Cornwall, UK at 200 <inline-formula><mml:math id="M1" display="inline"><mml:mi mathvariant="normal">hPa</mml:mi></mml:math></inline-formula> (near tropopause) and 700 <inline-formula><mml:math id="M2" display="inline"><mml:mi mathvariant="normal">hPa</mml:mi></mml:math></inline-formula> (lower troposphere). Included are
raw (black) and adjusted (green) radiosonde temperature data from the Hadley Centre (HadAT). The smooth difference series between
the two (blue solid line) shows the adjustments applied to the raw data (offset by 2.25 <inline-formula><mml:math id="M3" display="inline"><mml:mi mathvariant="normal">K</mml:mi></mml:math></inline-formula>; dashed grey line, indicating the
zero line for the differences). <bold>(b)</bold> The four radiosonde types used over this period (from left to right, with typical
periods of operation): Phillips Mark IIb (1950–1970); Phillips MK3 (mid-1970s to early 1990s); Vaisala RS-80 (early 1990s to
2005–2006); and Vaisala RS-92 (since 2005–2006). Dates of radiosonde changes are indicated by red dotted lines. Five other
potential sources of inconsistencies in the data sets include change in the radiation correction procedure (cross), change in the
data cut-off (star), change in pressure sensor (diamond), change in wind equipment (triangle), and/or change in relative humidity sensor
(square). Figure adapted from <xref ref-type="bibr" rid="bib1.bibx18" id="text.1"/>.</p></caption>
      <?xmltex \igopts{width=284.527559pt}?><graphic xlink:href="https://amt.copernicus.org/articles/11/3021/2018/amt-11-3021-2018-f01.png"/>

    </fig>

<sec id="Ch1.S1" sec-type="intro">
  <title>Introduction</title>
      <p id="d1e173">Radiosondes are indispensable for monitoring the upper air as
they provide high vertical resolution in situ observations of temperature,
pressure, and water vapour between the surface and the upper troposphere–lower
stratosphere. Determining long-term temperature trends from radiosonde
measurements is challenging because changes in instrumentation can, among
other things, introduce discontinuities in the measurement time series (see
Fig. <xref ref-type="fig" rid="Ch1.F1"/>). Since radiosonde measurements are primarily made
to provide the data needed to constrain weather forecasts and not to detect
long-term changes in climate, little attention has been paid to ensuring the
long-term homogeneity of the measurement record when changing from one
instrument to another. As a result, radiosonde data records typically fall
short of the standard required to reliably detect changes in climate. Another
cause of inhomogeneities in the record is undocumented changes in data
processing <xref ref-type="bibr" rid="bib1.bibx18" id="paren.2"/>. While much effort has been spent attempting
to remove discontinuities in radiosonde data records
<xref ref-type="bibr" rid="bib1.bibx15 bib1.bibx11 bib1.bibx4" id="paren.3"><named-content content-type="pre">e.g.</named-content></xref>, lack of
confidence in the long-term homogeneity erodes confidence in derived trends.
<xref ref-type="bibr" rid="bib1.bibx14" id="text.4"/> used upper-air temperatures from the NCEP-NCAR reanalysis
<xref ref-type="bibr" rid="bib1.bibx13" id="paren.5"/> to<?pagebreak page3022?> investigate the effects of sampling frequency, changes
in observation schedule, and the introduction of inhomogeneities on the
radiosonde climate data record. Their results indicate that introducing
inhomogeneities into a temperature time series provides the most significant
source of uncertainty in trend estimates. Maintaining the temperature
measurement stability to within 0.1 <inline-formula><mml:math id="M4" display="inline"><mml:mi mathvariant="normal">K</mml:mi></mml:math></inline-formula> for periods of 20 to 50 years
avoids uncertainties in trend estimates in at least 99 % of cases
<xref ref-type="bibr" rid="bib1.bibx14" id="paren.6"/>. With a weaker stability requirement of 0.25 <inline-formula><mml:math id="M5" display="inline"><mml:mi mathvariant="normal">K</mml:mi></mml:math></inline-formula>,
the uncertainty in a 50-year trend estimate increases by about 5 % for
twice-daily sampling. <xref ref-type="bibr" rid="bib1.bibx12" id="text.7"/> showed that inhomogeneities in
temperature measurements can cause spurious memory, leading to larger
uncertainty for statistics derived from these series. The results of these
studies demonstrate the need to account for any inhomogeneities in the
measurement time series prior to any trend analysis.</p>
      <p id="d1e213">The GCOS (Global Climate Observing System) Reference Upper-Air Network
(GRUAN) was established to provide reference-quality measurements of
atmospheric ECVs suitable for reliably detecting changes in global and
regional climate on decadal scales. To avoid compromising the integrity of
the long-term climate record, it is essential that<?pagebreak page3023?> any change, e.g. in the
instrumentation or data processing, is adequately assessed before the change
is implemented. For example, when transitioning from one radiosonde type to
another, inter-comparison between the two radiosonde types is required to assess
a potential systematic difference between the radiosondes and to correct for
it, ensuring a continuous homogeneous data set without any introduced
discontinuities. Typically, inter-comparisons of measurements from dual or
quadruple (two of each instrument type) radiosonde flights are used to
robustly detect systematic differences between the instruments
<xref ref-type="bibr" rid="bib1.bibx8 bib1.bibx17 bib1.bibx7 bib1.bibx6" id="paren.8"><named-content content-type="pre">e.g.</named-content></xref>.
Results presented in <xref ref-type="bibr" rid="bib1.bibx17" id="text.9"/> indicated that temperature
biases often increase significantly with increasing altitude, particularly in
the lower stratosphere. In the past, WMO conducted several radiosonde
inter-comparison campaigns <xref ref-type="bibr" rid="bib1.bibx5 bib1.bibx10" id="paren.10"><named-content content-type="pre">e.g.</named-content></xref> with the
objective of investigating the performance of operational radiosonde systems.
The results of these campaigns are used in part to improve the accuracy of
daytime operational radiosonde measurements and the associated correction
procedures to provide temperature and relative humidity accuracies currently
possible with night-time measurements. The knowledge of the performance that
can be expected from various radiosonde systems allows the users to make
a well-informed decision on the choice of future equipment. For a measurement
network like GRUAN, it is essential to have more than one good-quality
radiosonde type for operations. Instrument biases are also influenced by
clouds as shown in <xref ref-type="bibr" rid="bib1.bibx6" id="text.11"/> who found systematic differences in
temperature measurements greater than 2 <inline-formula><mml:math id="M6" display="inline"><mml:mi mathvariant="normal">K</mml:mi></mml:math></inline-formula> between the Vaisala RS92
and RS41 radiosonde when exiting cloud layers. This large difference in
temperature measurements between the two radiosondes was attributed to the
wet-bulb effect, in which the temperature sensor gets wet while passing through
a cloud layer and is subject to evaporative cooling after entering drier
parts of the atmosphere. Below 28 <inline-formula><mml:math id="M7" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula> of altitude, <xref ref-type="bibr" rid="bib1.bibx6" id="text.12"/>
found a mean systematic difference between the temperature measurements of
the two radiosondes of 0.13 <inline-formula><mml:math id="M8" display="inline"><mml:mi mathvariant="normal">K</mml:mi></mml:math></inline-formula>. For radiosonde measurements performed
at GRUAN sites, it is suggested that sites conduct dual sonde launches for at
least 6 months when changing from one instrument type to another
<xref ref-type="bibr" rid="bib1.bibx3" id="paren.13"/>. However, analysis of data from dual sonde launches conducted
at the GRUAN Lead Centre suggests that at least 200 dual flights over
a period of 1 year are required to accurately assess the systematic
difference between the two sonde types <xref ref-type="bibr" rid="bib1.bibx3" id="paren.14"/>. The number of dual
sonde flights required may be site dependent, and therefore site-specific
analysis is likely required to determine the required number of dual flights
at any site. Furthermore, it is possible that instrument biases at one site
may not be the same in different atmospheric conditions at other sites,
though this has not been extensively evaluated. Therefore, it would be ideal
if all GRUAN sites could complete thorough radiosonde inter-comparisons by
performing dual radiosonde launches for at least 6 months prior to any
instrument change. However, the costs of such a measurement campaign can be
significant, preventing some stations from performing extensive dual
launches.</p>
      <p id="d1e263">In this study, we investigate the feasibility of quantifying the difference
in biases of two instrument types by alternating between the two different
instruments and then applying a statistical model to infer any systematic
biases between the two instruments. For this study, we conduct the
investigation by applying the statistical model developed to synthetic data
sets, in which the persistence of weather conditions is a controllable parameter,
that represent such interlaced radiosonde flights. Specifically, we
investigate (i) whether a combination of interlaced measurements together with an
appropriate statistical model can be used to estimate the differences in
biases of two instrument types and, (ii) if so, how effective the approach
is. This method, if feasible, could reduce the financial burden for sites
seeking to manage such a transition, since an interlacing approach would not
require additional measurements above what is needed for normal daily
operation.</p>
</sec>
<sec id="Ch1.S2">
  <title>Methodology</title>
<sec id="Ch1.S2.SS1">
  <title>Background</title>
      <p id="d1e277">Any modification of instrumentation might introduce a systematic change to
the measurement time series. This change is typically assumed to be
a constant difference (<inline-formula><mml:math id="M9" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>) as a first-order approximation resulting
from differences in the individual instrument biases, i.e. their systematic
deviations from the true value. As the true value of the quantity being
measured is unknown in practice, it is not possible to estimate each
instrument's individual bias. It is possible, however, to estimate the
difference <inline-formula><mml:math id="M10" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mtext>Bias</mml:mtext><mml:mi>A</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mtext>Bias</mml:mtext><mml:mi>B</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> in biases <inline-formula><mml:math id="M11" display="inline"><mml:mrow><mml:msub><mml:mtext>Bias</mml:mtext><mml:mi>A</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and
<inline-formula><mml:math id="M12" display="inline"><mml:mrow><mml:msub><mml:mtext>Bias</mml:mtext><mml:mi>B</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> of instruments <inline-formula><mml:math id="M13" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M14" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula>. If temporally and spatially
coincident measurements are made using instrument <inline-formula><mml:math id="M15" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M16" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula> (i.e. dual
flights), this difference can be easily obtained: consider some quantity of
interest, e.g. air temperature (<inline-formula><mml:math id="M17" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula>), measured with instrument <inline-formula><mml:math id="M18" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> and
instrument <inline-formula><mml:math id="M19" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula> at the same location and time <inline-formula><mml:math id="M20" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula>. The bias of each instrument
is the difference between the expectation value of the instrument's
measurement and the unknown true value <inline-formula><mml:math id="M21" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>:

                <disp-formula specific-use="align" content-type="numbered"><mml:math id="M22" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mtext>Bias</mml:mtext><mml:mo>(</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>A</mml:mi></mml:mrow></mml:msub><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mi>E</mml:mi><mml:mo>[</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>A</mml:mi></mml:mrow></mml:msub><mml:mo>]</mml:mo><mml:mo>-</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mspace width="1em" linebreak="nobreak"/><mml:mtext>and</mml:mtext></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="Ch1.E1"><mml:mtd/><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mtext>Bias</mml:mtext><mml:mo>(</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>B</mml:mi></mml:mrow></mml:msub><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mi>E</mml:mi><mml:mo>[</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>B</mml:mi></mml:mrow></mml:msub><mml:mo>]</mml:mo><mml:mo>-</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

            where <inline-formula><mml:math id="M23" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>A</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M24" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>B</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> are the temperatures at time <inline-formula><mml:math id="M25" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula> measured with
instrument <inline-formula><mml:math id="M26" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M27" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula>, respectively. The difference in the instrument bias
is therefore

                <disp-formula id="Ch1.E2" content-type="numbered"><mml:math id="M28" display="block"><mml:mstyle class="stylechange" displaystyle="true"/><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mtext>Bias</mml:mtext><mml:mo>(</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>A</mml:mi></mml:mrow></mml:msub><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:mtext>Bias</mml:mtext><mml:mo>(</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>B</mml:mi></mml:mrow></mml:msub><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mi>E</mml:mi><mml:mo>[</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>A</mml:mi></mml:mrow></mml:msub><mml:mo>]</mml:mo><mml:mo>-</mml:mo><mml:mi>E</mml:mi><mml:mo>[</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>B</mml:mi></mml:mrow></mml:msub><mml:mo>]</mml:mo><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula></p>
      <?pagebreak page3024?><p id="d1e650"><?xmltex \hack{\newpage}?>Consider now that <inline-formula><mml:math id="M29" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>B</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> differs from <inline-formula><mml:math id="M30" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>A</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> only by
a constant offset <inline-formula><mml:math id="M31" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>, i.e.

                <disp-formula id="Ch1.E3" content-type="numbered"><mml:math id="M32" display="block"><mml:mstyle class="stylechange" displaystyle="true"/><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>A</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>B</mml:mi></mml:mrow></mml:msub><mml:mo>+</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          which is independent of the true value and thus the measurement time <inline-formula><mml:math id="M33" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula>.
Under this assumption, an estimate for the stationary difference in biases
can be obtained from <inline-formula><mml:math id="M34" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> dual measurements according to

                <disp-formula specific-use="align" content-type="numbered"><mml:math id="M35" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mover accent="true"><mml:mi mathvariant="normal">Δ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mi>N</mml:mi></mml:mfrac></mml:mstyle><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>t</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>N</mml:mi></mml:munderover><mml:mo>(</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>A</mml:mi></mml:mrow></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>B</mml:mi></mml:mrow></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="Ch1.E4"><mml:mtd/><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mi>N</mml:mi></mml:mfrac></mml:mstyle><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>t</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>N</mml:mi></mml:munderover><mml:mfenced close=")" open="("><mml:mrow><mml:mo>(</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>A</mml:mi></mml:mrow></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>B</mml:mi></mml:mrow></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

            with <inline-formula><mml:math id="M36" display="inline"><mml:mover accent="true"><mml:mi mathvariant="normal">Δ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover></mml:math></inline-formula> denoting an estimate of the constant offset <inline-formula><mml:math id="M37" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>.
This equation applies even if the true value <inline-formula><mml:math id="M38" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is changing with time as
it depends only on anomalies <inline-formula><mml:math id="M39" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>A</mml:mi><mml:mo>/</mml:mo><mml:mi>B</mml:mi></mml:mrow></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. Under suitable conditions, the
uncertainty (expressed in terms of standard deviation, SD) of this estimate
decreases with <inline-formula><mml:math id="M40" display="inline"><mml:msqrt><mml:mi>N</mml:mi></mml:msqrt></mml:math></inline-formula> and depends on the persistence (i.e.
autocorrelation) of the time series <xref ref-type="bibr" rid="bib1.bibx20" id="paren.15"/>.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2" specific-use="star"><caption><p id="d1e952">Example time series for interlaced measurements of instrument <inline-formula><mml:math id="M41" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula>
(red dots) and instrument <inline-formula><mml:math id="M42" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula> (green dots). Horizontal lines are the means of
the measurements using instrument <inline-formula><mml:math id="M43" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> (red) and instrument <inline-formula><mml:math id="M44" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula> (green).
Smooth dashed lines (red for instrument <inline-formula><mml:math id="M45" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula>, green for instrument <inline-formula><mml:math id="M46" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula>) are
spline estimates with the differences being an estimate for the differences
in the instrument biases.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://amt.copernicus.org/articles/11/3021/2018/amt-11-3021-2018-f02.pdf"/>

        </fig>

</sec>
<sec id="Ch1.S2.SS2">
  <title>A statistical model for interlaced measurements</title>
      <p id="d1e1010">As dual measurements using both instrument types require additional
resources and therefore inherent additional costs, estimating a systematic
difference between the instruments using interlaced measurements, i.e. using
instrument <inline-formula><mml:math id="M47" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> on odd days <inline-formula><mml:math id="M48" display="inline"><mml:mrow><mml:mi>t</mml:mi><mml:mo>∈</mml:mo><mml:mo mathvariant="italic">{</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">5</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo mathvariant="italic">}</mml:mo></mml:mrow></mml:math></inline-formula> and instrument <inline-formula><mml:math id="M49" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula> on even
days <inline-formula><mml:math id="M50" display="inline"><mml:mrow><mml:mi>t</mml:mi><mml:mo>∈</mml:mo><mml:mo mathvariant="italic">{</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">6</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo mathvariant="italic">}</mml:mo></mml:mrow></mml:math></inline-formula>, is explored in this study. Using this approach,
at every time <inline-formula><mml:math id="M51" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula> only one measurement from one instrument
is available, and hence Eq. (<xref ref-type="disp-formula" rid="Ch1.E4"/>) is not applicable.</p>
      <p id="d1e1093">The underlying assumption for the approach outlined here to work is that the
quantity of interest fluctuates around a smooth climatological signal (i.e.
a seasonal cycle) and the fluctuations show a certain degree of persistence
at the weather timescale; e.g. the fluctuations show a day to day
dependence. For a typical difference in the biases between radiosondes this
persistence (i.e. autocorrelation) is key to the idea of estimating a bias
from interlaced measurements. The difference in the biases tested here is
smaller than the day to day fluctuations themselves as it carries information
from the measurement <inline-formula><mml:math id="M52" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> to the measurement <inline-formula><mml:math id="M53" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula>.</p>
      <p id="d1e1110">In the following, a simplified model for air temperature time series
complying with the above-mentioned assumptions is constructed. The true
(unobserved) time series is represented by a smooth seasonal cycle with an
autoregressive process of first order <xref ref-type="bibr" rid="bib1.bibx1 bib1.bibx20" id="paren.16"><named-content content-type="pre">AR[1],
e.g.</named-content></xref> added to the time series; i.e.

                <disp-formula specific-use="align" content-type="numbered"><mml:math id="M54" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi>T</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msub><mml:mi mathvariant="italic">μ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">μ</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi>sin⁡</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">π</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>d</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow><mml:mn mathvariant="normal">365</mml:mn></mml:mfrac></mml:mstyle><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi mathvariant="italic">π</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="Ch1.E5"><mml:mtd/><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">μ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi>sin⁡</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="italic">π</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msub><mml:mi>d</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow><mml:mn mathvariant="normal">365</mml:mn></mml:mfrac></mml:mstyle><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi mathvariant="italic">π</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula></p>
      <p id="d1e1234"><?xmltex \hack{\newpage}?>

                <disp-formula id="Ch1.E6" content-type="numbered"><mml:math id="M55" display="block"><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>=</mml:mo></mml:mrow><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi>a</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msub><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">η</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          with <inline-formula><mml:math id="M56" display="inline"><mml:mrow><mml:msub><mml:mi>d</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>∈</mml:mo><mml:mo>[</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">365</mml:mn><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> giving the day in the year for date <inline-formula><mml:math id="M57" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula>, where
<inline-formula><mml:math id="M58" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> is the autocorrelation coefficient which describes the degree of
persistence in the time series at the weather timescale, e.g. the
fluctuations show a day to day dependence, and <inline-formula><mml:math id="M59" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">η</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>∼</mml:mo><mml:mi mathvariant="script">N</mml:mi><mml:mo>(</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:msup><mml:mi mathvariant="italic">σ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is the driving noise of the AR[1] process selected
randomly from a Gaussian distribution. The latter is taken to be Gaussian
white noise with zero mean and variance <inline-formula><mml:math id="M60" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">σ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>. This is
a well-established model for the persistence of e.g. daily air temperatures
<xref ref-type="bibr" rid="bib1.bibx20" id="paren.17"><named-content content-type="pre">e.g.</named-content></xref>.</p>
      <p id="d1e1364">Pseudo-observations are now obtained from a realization of <inline-formula><mml:math id="M61" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>
(Eq. <xref ref-type="disp-formula" rid="Ch1.E5"/>) with an instrument bias and random measurement noise
added. Here, we aim for interlaced temperature measurements <inline-formula><mml:math id="M62" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>A</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> and
<inline-formula><mml:math id="M63" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>B</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> from instruments <inline-formula><mml:math id="M64" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M65" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula> and thus add the instrument biases
<inline-formula><mml:math id="M66" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi>A</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M67" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi>B</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, respectively, and independent Gaussian measurement
uncertainties <inline-formula><mml:math id="M68" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>A</mml:mi></mml:mrow></mml:msub><mml:mo>∼</mml:mo><mml:mi mathvariant="script">N</mml:mi><mml:mo>(</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi>A</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and
<inline-formula><mml:math id="M69" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>B</mml:mi></mml:mrow></mml:msub><mml:mo>∼</mml:mo><mml:mi mathvariant="script">N</mml:mi><mml:mo>(</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi>B</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>:

                <disp-formula specific-use="align" content-type="numbered"><mml:math id="M70" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E7"><mml:mtd/><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>A</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>=</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mi>A</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>A</mml:mi></mml:mrow></mml:msub><mml:mspace width="1em" linebreak="nobreak"/><mml:mi>t</mml:mi><mml:mo>∈</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mi>A</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mo mathvariant="italic">{</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">5</mml:mn><mml:mi mathvariant="normal">…</mml:mi><mml:mo mathvariant="italic">}</mml:mo><mml:mspace linebreak="nobreak" width="1em"/><mml:mtext>and</mml:mtext></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E8"><mml:mtd/><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>B</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>=</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mi>B</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>B</mml:mi></mml:mrow></mml:msub><mml:mspace width="1em" linebreak="nobreak"/><mml:mi>t</mml:mi><mml:mo>∈</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mi>B</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mo mathvariant="italic">{</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">6</mml:mn><mml:mi mathvariant="normal">…</mml:mi><mml:mo mathvariant="italic">}</mml:mo><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

            For simplicity, we assume equal variances <inline-formula><mml:math id="M71" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi>A</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> = <inline-formula><mml:math id="M72" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi>B</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> for the
measurement uncertainties. The continuous series of combined interlaced
measurements <inline-formula><mml:math id="M73" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>A</mml:mi><mml:mi>B</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> for <inline-formula><mml:math id="M74" display="inline"><mml:mrow><mml:mi>t</mml:mi><mml:mo>∈</mml:mo><mml:mo mathvariant="italic">{</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo mathvariant="italic">}</mml:mo></mml:mrow></mml:math></inline-formula> is therefore

                <disp-formula id="Ch1.E9" content-type="numbered"><mml:math id="M75" display="block"><mml:mstyle displaystyle="true" class="stylechange"/><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>A</mml:mi><mml:mi>B</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mi>A</mml:mi></mml:msub><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">χ</mml:mi><mml:mo>(</mml:mo><mml:mi>t</mml:mi><mml:mo>∈</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mi>A</mml:mi></mml:msub><mml:mo>)</mml:mo><mml:mo>+</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mi>B</mml:mi></mml:msub><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">χ</mml:mi><mml:mo>(</mml:mo><mml:mi>t</mml:mi><mml:mo>∈</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mi>b</mml:mi></mml:msub><mml:mo>)</mml:mo><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          with indicator function <inline-formula><mml:math id="M76" display="inline"><mml:mi mathvariant="italic">χ</mml:mi></mml:math></inline-formula> being 1 if <inline-formula><mml:math id="M77" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula> is a member of the set <inline-formula><mml:math id="M78" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi>A</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> or
<inline-formula><mml:math id="M79" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi>B</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and 0 otherwise. Figure <xref ref-type="fig" rid="Ch1.F2"/> shows an
example of such a synthetic time series of interlaced measurements. This
example is based on a simulated temperature time series using a realization
of an AR[1] process using an autocorrelation coefficient of <inline-formula><mml:math id="M80" display="inline"><mml:mrow><mml:mi>a</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula> in
Eq. (<xref ref-type="disp-formula" rid="Ch1.E6"/>), similar to the autocorrelation coefficient of radiosonde
measurements at 300 <inline-formula><mml:math id="M81" display="inline"><mml:mi mathvariant="normal">hPa</mml:mi></mml:math></inline-formula> above Lindenberg, Germany (see
Sec. <xref ref-type="sec" rid="Ch1.S2.SS4"/>).</p>
</sec>
<sec id="Ch1.S2.SS3">
  <title>Estimating the difference in instrument biases</title>
      <p id="d1e1902">A direct approach to estimate the difference in instrument biases
<inline-formula><mml:math id="M82" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mi>A</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mi>B</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is an estimation using the differences in means
<inline-formula><mml:math id="M83" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi>A</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M84" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi>B</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> of instrument <inline-formula><mml:math id="M85" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M86" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula>,
respectively, over a common time period <inline-formula><mml:math id="M87" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> to <inline-formula><mml:math id="M88" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>; i.e.

                <disp-formula id="Ch1.E10" content-type="numbered"><mml:math id="M89" display="block"><mml:mstyle displaystyle="true" class="stylechange"/><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mover accent="true"><mml:mi mathvariant="normal">Δ</mml:mi><mml:mo stretchy="true" mathvariant="normal">^</mml:mo></mml:mover><mml:mtext>mean</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi>A</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi>B</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          with

                <disp-formula specific-use="align" content-type="numbered"><mml:math id="M90" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi>A</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi>A</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>t</mml:mi><mml:mo>≥</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow><mml:mrow><mml:mi>t</mml:mi><mml:mo>≤</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:munderover><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>A</mml:mi></mml:mrow></mml:msub><mml:mspace linebreak="nobreak" width="1em"/><mml:mtext>for</mml:mtext><mml:mspace linebreak="nobreak" width="1em"/><mml:mi>t</mml:mi><mml:mo>∈</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mi>A</mml:mi></mml:msub><mml:mspace width="1em" linebreak="nobreak"/><mml:mtext>and</mml:mtext></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="Ch1.E11"><mml:mtd/><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi>B</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi>B</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>t</mml:mi><mml:mo>≥</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow><mml:mrow><mml:mi>t</mml:mi><mml:mo>≤</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:munderover><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>B</mml:mi></mml:mrow></mml:msub><mml:mspace linebreak="nobreak" width="1em"/><mml:mtext>for</mml:mtext><mml:mspace width="1em" linebreak="nobreak"/><mml:mi>t</mml:mi><mml:mo>∈</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mi>B</mml:mi></mml:msub></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

            being the arithmetic means for the individual instruments; <inline-formula><mml:math id="M91" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi>A</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M92" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi>B</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>
are the number of measurements made by instrument <inline-formula><mml:math id="M93" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M94" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula>, respectively,
in the given time period. The<?pagebreak page3025?> uncertainty in this estimate of the difference
in instrument biases decreases with increasing <inline-formula><mml:math id="M95" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi>A</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M96" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi>B</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> but also depends
on the persistence of the underlying time series: larger persistence
leads to larger uncertainties when calculating arithmetic means
<xref ref-type="bibr" rid="bib1.bibx19" id="paren.18"><named-content content-type="pre">e.g.</named-content></xref>.</p>
      <p id="d1e2250">Here, we exploit the persistence and suggest an approach based on the
estimation of a slowly varying signal common to both instruments. Imagine,
for example, a smooth temperature time series in the absence of
weather-induced noise. Measurements are then made of that signal using
instrument <inline-formula><mml:math id="M97" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> and this measurement series is represented by <inline-formula><mml:math id="M98" display="inline"><mml:mrow><mml:mi>s</mml:mi><mml:mo>(</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and an
additional measurement noise <inline-formula><mml:math id="M99" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. Analogously, measurements of the
same slowly varying signal are made using instrument <inline-formula><mml:math id="M100" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula> and can be
represented by the same <inline-formula><mml:math id="M101" display="inline"><mml:mrow><mml:mi>s</mml:mi><mml:mo>(</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> but with the difference in instrument biases
<inline-formula><mml:math id="M102" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula> and again measurement noise <inline-formula><mml:math id="M103" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>; i.e. <inline-formula><mml:math id="M104" display="inline"><mml:mrow><mml:mi>s</mml:mi><mml:mo>(</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mo>+</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. A model for these interlaced measurements <inline-formula><mml:math id="M105" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>A</mml:mi><mml:mi>B</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> is
constructed using the indicator function <inline-formula><mml:math id="M106" display="inline"><mml:mi mathvariant="italic">χ</mml:mi></mml:math></inline-formula>:

                <disp-formula id="Ch1.E12" content-type="numbered"><mml:math id="M107" display="block"><mml:mstyle displaystyle="true" class="stylechange"/><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>A</mml:mi><mml:mi>B</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mi>s</mml:mi><mml:mo>(</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mo>+</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">χ</mml:mi><mml:mo>(</mml:mo><mml:mi>t</mml:mi><mml:mo>∈</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mi>B</mml:mi></mml:msub><mml:mo>)</mml:mo><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>

          For <inline-formula><mml:math id="M108" display="inline"><mml:mrow><mml:mi>t</mml:mi><mml:mo>∈</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mi>B</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, the indicator function <inline-formula><mml:math id="M109" display="inline"><mml:mrow><mml:mi mathvariant="italic">χ</mml:mi><mml:mo>(</mml:mo><mml:mi>t</mml:mi><mml:mo>∈</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mi>B</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> returns <inline-formula><mml:math id="M110" display="inline"><mml:mn mathvariant="normal">1</mml:mn></mml:math></inline-formula> and we
obtain a measurement with instrument <inline-formula><mml:math id="M111" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula>, i.e. <inline-formula><mml:math id="M112" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>B</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mi>s</mml:mi><mml:mo>(</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mo>+</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. For other time steps <inline-formula><mml:math id="M113" display="inline"><mml:mrow><mml:mi>t</mml:mi><mml:mo>∈</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mi>A</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> the indicator function returns
<inline-formula><mml:math id="M114" display="inline"><mml:mn mathvariant="normal">0</mml:mn></mml:math></inline-formula> and we obtain a measurement of instrument <inline-formula><mml:math id="M115" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula>, i.e. <inline-formula><mml:math id="M116" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mrow><mml:mi>t</mml:mi><mml:mo>,</mml:mo><mml:mi>A</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mi>s</mml:mi><mml:mo>(</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, excluding the difference in instrument bias <inline-formula><mml:math id="M117" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>. The
statistical model described in Eq. (<xref ref-type="disp-formula" rid="Ch1.E12"/>) belongs to the class
of generalized additive models <xref ref-type="bibr" rid="bib1.bibx2" id="paren.19"><named-content content-type="pre">GAMs; e.g.</named-content></xref>,
a fundamental class of regression models. GAMs extend generalized linear
models (or linear regression) by additionally introducing to the classical
linear components a smooth term <inline-formula><mml:math id="M118" display="inline"><mml:mi>s</mml:mi></mml:math></inline-formula>. This smooth term can be estimated using
a smooth spline fit with its degrees of freedom (i.e. its flexibility of
smoothness) determined by generalized cross validation <xref ref-type="bibr" rid="bib1.bibx21" id="paren.20"/>.
This functionality is implemented in the R package <monospace>mgcv</monospace>
<xref ref-type="bibr" rid="bib1.bibx21" id="paren.21"/>.</p>
</sec>
<sec id="Ch1.S2.SS4">
  <title>Simulation set-up</title>
      <p id="d1e2633">To investigate whether interlaced measurements diagnosed using the
methodology described above can be used to estimate potential biases between
instruments, we design a simulation study wherein an ensemble of synthetic
upper-air temperature time series is generated using a stochastic process.
For each member of the ensemble, interlaced measurements for two instruments
are obtained by adding a systematic measurement uncertainty (i.e. bias) for
each instrument plus some random measurement noise. As the instrument biases
are known, their difference <inline-formula><mml:math id="M119" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula> is also known. The questions to be
answered in this study are the following.
<list list-type="order"><list-item>
      <p id="d1e2645">Can a combination of interlaced measurements, together with an adequate statistical model, be used to estimate the difference in
instrument biases?</p></list-item><list-item>
      <p id="d1e2649">If so, how effective is this estimation compared to an approach requiring dual measurements?</p></list-item></list>
An analysis of the 300 <inline-formula><mml:math id="M120" display="inline"><mml:mi mathvariant="normal">hPa</mml:mi></mml:math></inline-formula> temperatures measured by radiosondes at
Lindenberg, Germany forms the basis for this simulation study. After
subtracting the seasonal cycle, the temperature anomalies show a variance of
about <inline-formula><mml:math id="M121" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mtext>anomalies</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">10</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">K</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> and can be adequately
described with an AR[1] process as in Eq. (<xref ref-type="disp-formula" rid="Ch1.E6"/>) with <inline-formula><mml:math id="M122" display="inline"><mml:mrow><mml:mi>a</mml:mi><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula>.
To provide a realistic synthetic time series for analysis, we use driving
Gaussian white noise <inline-formula><mml:math id="M123" display="inline"><mml:mrow><mml:mi mathvariant="italic">η</mml:mi><mml:mo>∼</mml:mo><mml:mi mathvariant="script">N</mml:mi><mml:mo>(</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi>a</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula>) with variance
<inline-formula><mml:math id="M124" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi>a</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:msup><mml:mi>a</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>)</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mtext>anomalies</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula>. This choice of
<inline-formula><mml:math id="M125" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi>a</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> ensures that the anomaly variance is fixed at
<inline-formula><mml:math id="M126" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mtext>anomalies</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">10</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">K</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> independent of the value of
<inline-formula><mml:math id="M127" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>. This is necessary as we vary the persistence parameter (i.e. the
autocorrelation coefficient) <inline-formula><mml:math id="M128" display="inline"><mml:mrow><mml:mi>a</mml:mi><mml:mo>∈</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> to study time series with different
persistence but identical anomaly variance.</p>
      <p id="d1e2823">The synthetic temperature series is generated using Eq. (<xref ref-type="disp-formula" rid="Ch1.E9"/>)
that includes a seasonal cycle and a realization of an AR[1] process. The
instrument biases in Eq. (<xref ref-type="disp-formula" rid="Ch1.E9"/>) are prescribed at
<inline-formula><mml:math id="M129" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi>A</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.1</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M130" display="inline"><mml:mi mathvariant="normal">K</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M131" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi>B</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.2</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M132" display="inline"><mml:mi mathvariant="normal">K</mml:mi></mml:math></inline-formula> and are added to the time series
together with a measurement uncertainty being specified as Gaussian white
noise <inline-formula><mml:math id="M133" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mo>∼</mml:mo><mml:mi mathvariant="script">N</mml:mi><mml:mo>(</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:msup><mml:mi mathvariant="italic">σ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. The resulting two time series
for instruments <inline-formula><mml:math id="M134" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M135" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula> are combined to (a) a synthetic time series of
dual measurements and (b) an interlaced observational counterpart. The
difference in instrument biases between the two time series is prescribed as
<inline-formula><mml:math id="M136" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mi>A</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mi>B</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.1</mml:mn><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.2</mml:mn><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.3</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula>. To investigate the influence of
(i) persistence in the temperature series, (ii) measurement noise, and (iii)
the number of measurements on our ability to estimate the difference in biases
between two instruments, the following parameters are prescribed and
controlled in our study: <?xmltex \hack{\arraycolsep 0 pt}?>

                <disp-formula specific-use="align"><mml:math id="M137" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mtable class="array" columnalign="left"><mml:mtr><mml:mtd><mml:mtext mathvariant="bold">persistence of the time series</mml:mtext></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mi>a</mml:mi><mml:mo>∈</mml:mo><mml:mo mathvariant="italic">{</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">0.7</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">0.9</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">0.95</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">0.99</mml:mn><mml:mo mathvariant="italic">}</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mtable class="array" columnalign="left"><mml:mtr><mml:mtd><mml:mtext mathvariant="bold">number of measurements</mml:mtext></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mi>N</mml:mi><mml:mo>∈</mml:mo><mml:mo mathvariant="italic">{</mml:mo><mml:mn mathvariant="normal">50</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">100</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">250</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">500</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">1000</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">2000</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">3000</mml:mn><mml:mo mathvariant="italic">}</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

            leading to <inline-formula><mml:math id="M138" display="inline"><mml:mrow><mml:mn mathvariant="normal">6</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">7</mml:mn><mml:mo>=</mml:mo><mml:mn mathvariant="normal">42</mml:mn></mml:mrow></mml:math></inline-formula> combinations, i.e. 42 synthetic time series to
be analysed. The instrument noise is fixed at <inline-formula><mml:math id="M139" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">σ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>∈</mml:mo></mml:mrow></mml:math></inline-formula> 0.1. To
generate a synthetic time series for a given <inline-formula><mml:math id="M140" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M141" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula>, and <inline-formula><mml:math id="M142" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>, the
following steps were taken.
<list list-type="order"><list-item>
      <p id="d1e3118">Generate a time series of length <inline-formula><mml:math id="M143" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> consisting of an annual cycle and a realization of an AR[1] process as described above.</p></list-item><list-item>
      <p id="d1e3129">Add an offset of <inline-formula><mml:math id="M144" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.1</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M145" display="inline"><mml:mi mathvariant="normal">K</mml:mi></mml:math></inline-formula> (instrument bias of instrument <inline-formula><mml:math id="M146" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula>) and Gaussian noise with variance <inline-formula><mml:math id="M147" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">σ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.1</mml:mn></mml:mrow></mml:math></inline-formula> to
produce a synthetic time series for instrument <inline-formula><mml:math id="M148" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula>.</p></list-item><list-item>
      <p id="d1e3179">Add an offset of 0.2 <inline-formula><mml:math id="M149" display="inline"><mml:mi mathvariant="normal">K</mml:mi></mml:math></inline-formula> (instrument bias of instrument <inline-formula><mml:math id="M150" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula>) and Gaussian noise with variance <inline-formula><mml:math id="M151" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">σ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.1</mml:mn></mml:mrow></mml:math></inline-formula> to produce
a synthetic time series for instrument <inline-formula><mml:math id="M152" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula>.</p></list-item><list-item>
      <p id="d1e3219">Select measurements from <inline-formula><mml:math id="M153" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> for odd days and from <inline-formula><mml:math id="M154" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula> for even days to generate an interlaced time series.</p></list-item><list-item>
      <p id="d1e3237">Repeat steps 1 to 4 many times (e.g. <inline-formula><mml:math id="M155" display="inline"><mml:mrow><mml:mi>M</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1000</mml:mn></mml:mrow></mml:math></inline-formula>, where <inline-formula><mml:math id="M156" display="inline"><mml:mi>M</mml:mi></mml:math></inline-formula> denotes the number of repetitions) to generate <inline-formula><mml:math id="M157" display="inline"><mml:mn mathvariant="normal">1000</mml:mn></mml:math></inline-formula> synthetic time
series to derive statistically robust estimates of <inline-formula><mml:math id="M158" display="inline"><mml:mover accent="true"><mml:mi mathvariant="normal">Δ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover></mml:math></inline-formula>.</p></list-item></list>
The difference in instrument biases is then estimated based on
<list list-type="order"><list-item>
      <p id="d1e3279">the calculated mean values of <inline-formula><mml:math id="M159" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> dual measurements (Eq. <xref ref-type="disp-formula" rid="Ch1.E10"/>), i.e. <inline-formula><mml:math id="M160" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> measurements for <inline-formula><mml:math id="M161" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M162" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> measurements
for <inline-formula><mml:math id="M163" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula> made simultaneously, and</p></list-item><list-item>
      <p id="d1e3321">results from the statistical model (Eq. <xref ref-type="disp-formula" rid="Ch1.E12"/>) using the time series of <inline-formula><mml:math id="M164" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> interlaced measurement, i.e. <inline-formula><mml:math id="M165" display="inline"><mml:mrow><mml:mi>N</mml:mi><mml:mo>/</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula>
measurements for <inline-formula><mml:math id="M166" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M167" display="inline"><mml:mrow><mml:mi>N</mml:mi><mml:mo>/</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> measurements for <inline-formula><mml:math id="M168" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula>.</p></list-item></list></p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3"><caption><p id="d1e3374">Box and whisker plots of bias estimates (<inline-formula><mml:math id="M169" display="inline"><mml:mover accent="true"><mml:mi mathvariant="normal">Δ</mml:mi><mml:mo stretchy="true" mathvariant="normal">^</mml:mo></mml:mover></mml:math></inline-formula>) against the number of interlaced flights <inline-formula><mml:math id="M170" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> (50 flights means 25
flights of instrument <inline-formula><mml:math id="M171" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> and 25 flights of instrument <inline-formula><mml:math id="M172" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula>) as derived from <inline-formula><mml:math id="M173" display="inline"><mml:mrow><mml:mi>M</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1000</mml:mn></mml:mrow></mml:math></inline-formula> simulations using an autocorrelation
coefficient of <inline-formula><mml:math id="M174" display="inline"><mml:mrow><mml:mi>a</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula> <bold>(a)</bold>, <inline-formula><mml:math id="M175" display="inline"><mml:mrow><mml:mi>a</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn></mml:mrow></mml:math></inline-formula> <bold>(b)</bold>, and <inline-formula><mml:math id="M176" display="inline"><mml:mrow><mml:mi>a</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.9</mml:mn></mml:mrow></mml:math></inline-formula> <bold>(c)</bold> and a measurement noise of <inline-formula><mml:math id="M177" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">σ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.1</mml:mn></mml:mrow></mml:math></inline-formula>. The boxes show the
inter-quartile range. The upper and lower whiskers represent the maximum (excluding outliers) and minimum (excluding
outliers). Suspected outliers are shown as dots and are located outside the fences (“whiskers”) of the box plot (e.g. outside 1.5
times the inter-quartile range above the upper quartile and below the lower quartile). The true difference in biases
<inline-formula><mml:math id="M178" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.3</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula> is marked with a red line.</p></caption>
          <?xmltex \igopts{width=199.169291pt}?><graphic xlink:href="https://amt.copernicus.org/articles/11/3021/2018/amt-11-3021-2018-f03.pdf"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4"><caption><p id="d1e3508">SD of <inline-formula><mml:math id="M179" display="inline"><mml:mover accent="true"><mml:mi mathvariant="normal">Δ</mml:mi><mml:mo stretchy="true" mathvariant="normal">^</mml:mo></mml:mover></mml:math></inline-formula> against the number of flights <inline-formula><mml:math id="M180" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> for different
AR[1] coefficients <inline-formula><mml:math id="M181" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>. The black solid line represents the
reference experiment with dual flights of instruments <inline-formula><mml:math id="M182" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M183" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula>, i.e. <inline-formula><mml:math id="M184" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi>N</mml:mi></mml:mrow></mml:math></inline-formula> measurements. To compare the results from the dual
flights (black solid line) with the results obtained from interlaced flights, the number of dual flights has to be doubled. Note the
logarithmic vertical scale.</p></caption>
          <?xmltex \igopts{width=213.395669pt}?><graphic xlink:href="https://amt.copernicus.org/articles/11/3021/2018/amt-11-3021-2018-f04.png"/>

        </fig>

</sec>
</sec>
<?pagebreak page3026?><sec id="Ch1.S3">
  <title>Results</title>
      <p id="d1e3574">The box plots in Fig. <xref ref-type="fig" rid="Ch1.F3"/> summarize the distribution of
<inline-formula><mml:math id="M185" display="inline"><mml:mrow><mml:mi>M</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1000</mml:mn></mml:mrow></mml:math></inline-formula> bias estimates <inline-formula><mml:math id="M186" display="inline"><mml:mover accent="true"><mml:mi mathvariant="normal">Δ</mml:mi><mml:mo stretchy="true" mathvariant="normal">^</mml:mo></mml:mover></mml:math></inline-formula> for a varying number of interlaced
flights <inline-formula><mml:math id="M187" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula>. Figure <xref ref-type="fig" rid="Ch1.F3"/>a is based on the
simulated temperature time series with an AR[1] coefficient <inline-formula><mml:math id="M188" display="inline"><mml:mrow><mml:mi>a</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula>, being
similar to the autocorrelation coefficient found for temperature measurements
at 300 <inline-formula><mml:math id="M189" display="inline"><mml:mi mathvariant="normal">hPa</mml:mi></mml:math></inline-formula> above Lindenberg. Figure 3b and c are examples
for stronger persistence, i.e. <inline-formula><mml:math id="M190" display="inline"><mml:mrow><mml:mi>a</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M191" display="inline"><mml:mrow><mml:mi>a</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.9</mml:mn></mml:mrow></mml:math></inline-formula>, respectively. All panels
show that the spread in the estimated difference in bias between instruments
<inline-formula><mml:math id="M192" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M193" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula> (<inline-formula><mml:math id="M194" display="inline"><mml:mover accent="true"><mml:mi mathvariant="normal">Δ</mml:mi><mml:mo mathvariant="normal" stretchy="true">^</mml:mo></mml:mover></mml:math></inline-formula>) converges towards the true value
(<inline-formula><mml:math id="M195" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.3</mml:mn></mml:mrow></mml:math></inline-formula>) for increasing <inline-formula><mml:math id="M196" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> in all cases. The rate at which this
converges with increasing <inline-formula><mml:math id="M197" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> depends on the persistence (i.e.
autocorrelation) in the underlying time series. Weak persistence (small <inline-formula><mml:math id="M198" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>)
leads to slower convergence (Fig. <xref ref-type="fig" rid="Ch1.F3"/>a), while strong
persistence (<inline-formula><mml:math id="M199" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> approaching 1) shows faster convergence.</p>
      <?pagebreak page3027?><p id="d1e3724">The SD of <inline-formula><mml:math id="M200" display="inline"><mml:mover accent="true"><mml:mi mathvariant="normal">Δ</mml:mi><mml:mo mathvariant="normal" stretchy="true">^</mml:mo></mml:mover></mml:math></inline-formula> (see Fig. <xref ref-type="fig" rid="Ch1.F4"/>), representing the
uncertainty with which the difference in the bias between instruments <inline-formula><mml:math id="M201" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> and
<inline-formula><mml:math id="M202" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula> can be estimated, depends on the number of interlaced flights and on the
AR[1] coefficient <inline-formula><mml:math id="M203" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> (coloured lines in Fig. <xref ref-type="fig" rid="Ch1.F4"/>). The SD can be
used to construct asymptotic confidence intervals for the estimates using the
standard normal assumption <xref ref-type="bibr" rid="bib1.bibx20" id="paren.22"><named-content content-type="pre">e.g.</named-content><named-content content-type="post">chap. 5</named-content></xref>; i.e. for
a 95 % confidence interval, the estimated bias needs to be within 1.96
times the SD. For all <inline-formula><mml:math id="M204" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>, the SD decreases with increasing <inline-formula><mml:math id="M205" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula>; however, the
SD is generally larger for weak persistence (small <inline-formula><mml:math id="M206" display="inline"><mml:mrow><mml:mi>a</mml:mi><mml:mo>∈</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>) and smaller
for strong persistent (large <inline-formula><mml:math id="M207" display="inline"><mml:mrow><mml:mi>a</mml:mi><mml:mo>∈</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>).</p>
      <p id="d1e3824">The synthetic time series of dual flights performed with instrument <inline-formula><mml:math id="M208" display="inline"><mml:mi>A</mml:mi></mml:math></inline-formula> and
<inline-formula><mml:math id="M209" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula> simultaneously at <inline-formula><mml:math id="M210" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> times (i.e. <inline-formula><mml:math id="M211" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi>N</mml:mi></mml:mrow></mml:math></inline-formula> measurements, solid black line in
Fig. <xref ref-type="fig" rid="Ch1.F4"/>) provides the most reliable estimate of the biases
between the instruments; i.e. the SD is smallest for any <inline-formula><mml:math id="M212" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula>. To provide
a robust comparison of the results from the dual flights to the results from
<inline-formula><mml:math id="M213" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> interlaced measurements, the results from the dual flights need to be
compared to the results of doubled <inline-formula><mml:math id="M214" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> interlaced flights. For a time series
with an autocorrelation coefficient of <inline-formula><mml:math id="M215" display="inline"><mml:mrow><mml:mi>a</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula>, at least 2000 days of
consecutive interlaced daily measurements would be required to estimate the
difference in instrument biases with a SD of 0.22 <inline-formula><mml:math id="M216" display="inline"><mml:mi mathvariant="normal">K</mml:mi></mml:math></inline-formula>. Consider the
following example: a station operator seeks to detect the difference in bias
between two radiosondes in a temperature time series showing an
autocorrelation coefficient of <inline-formula><mml:math id="M217" display="inline"><mml:mn mathvariant="normal">0.95</mml:mn></mml:math></inline-formula>. The station operator requires a SD of
<inline-formula><mml:math id="M218" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi mathvariant="normal">Δ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">0.05</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M219" display="inline"><mml:mi mathvariant="normal">K</mml:mi></mml:math></inline-formula>, which leads to a 95 % confidence
interval of about 0.1 <inline-formula><mml:math id="M220" display="inline"><mml:mi mathvariant="normal">K</mml:mi></mml:math></inline-formula> (<inline-formula><mml:math id="M221" display="inline"><mml:mrow><mml:mo>≈</mml:mo><mml:mn mathvariant="normal">0.05</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">1.96</mml:mn></mml:mrow></mml:math></inline-formula>). Then, from
Fig. <xref ref-type="fig" rid="Ch1.F4"/> it can be inferred that 500 interlaced measurements are
required to achieve this. Furthermore, we conclude that if an operator has
a given amount of two types of radiosondes available from which the
difference in instrument biases needs to be estimated, it is clear from
Fig. <xref ref-type="fig" rid="Ch1.F4"/> that dual flights result in better estimates (i.e.
smaller SD in Fig. <xref ref-type="fig" rid="Ch1.F4"/>) than interlacing the instrument types
from one day to the next. The results presented here (from dual and
interlaced flights) also depend on the variance of the signal; for a higher
measurement noise, the number of required days will increase and vice versa
(not shown).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5"><caption><p id="d1e3962">Vertical profiles of calculated autocorrelation coefficients for six
GRUAN sites (colour coded as shown in the
legend). Autocorrelation coefficients were calculated from ERA5 temperature data interpolated to the location of the GRUAN sites.</p></caption>
        <?xmltex \igopts{width=227.622047pt}?><graphic xlink:href="https://amt.copernicus.org/articles/11/3021/2018/amt-11-3021-2018-f05.png"/>

      </fig>

      <p id="d1e3972">The results indicate that for typical difference in biases between radiosonde
types, the presented method on interlaced measurements is unlikely to provide
a robust estimate of the difference in biases for a reasonable length of the
measurement period (reasonable is considered as 2 years here). That said,
there might be cases of larger instrument biases and/or larger persistence
in which the interlaced method could provide an alternative method to dual
measurements, requiring fewer resources. Vertical profiles of autocorrelation
coefficients as calculated from temperature data obtained from ERA5
reanalyses
(<uri>https://www.ecmwf.int/en/forecasts/datasets/archive-datasets/reanalysis-datasets/era5</uri>, last access: 4 April 2018) are shown in Fig. <xref ref-type="fig" rid="Ch1.F5"/>.
Temperature data were interpolated to the locations of six GRUAN sites,
including sites in the tropics and the middle and high latitudes. Here we calculated
the autocorrelation coefficient from ERA5 data rather than from radiosonde
measurements, as long-term continuous measurements are required to obtain
a robust estimate of the seasonal cycle of the temperature time series before
calculating the autocorrelation coefficients. Such continuous observations,
covering at least 2 years of daily radiosonde flights, are currently only
available at a small subset of GRUAN sites, which does not cover all latitude
bands. ERA5 is the latest reanalysis provided by<?pagebreak page3028?> the ECMWF and
the calculated autocorrelation coefficients are expected to provide a good estimate of
the autocorrelation coefficient at each of the selected sites.
Figure <xref ref-type="fig" rid="Ch1.F5"/> shows that the persistence varies strongly with
altitude, and if the interlacing method is used, it has to be applied at
different altitudes separately. For lower altitudes (pressure levels above
250 <inline-formula><mml:math id="M222" display="inline"><mml:mi mathvariant="normal">hPa</mml:mi></mml:math></inline-formula>), the autocorrelation coefficients vary between 0.4 and 0.8,
with the lowest coefficients at the southern middle latitudes (e.g. Lauder,
New Zealand). The persistence increases at higher altitudes (below
250 <inline-formula><mml:math id="M223" display="inline"><mml:mi mathvariant="normal">hPa</mml:mi></mml:math></inline-formula>), ranging from 0.7 in the tropics to 0.95 at higher
latitudes. The results indicate that the interlacing method may be able to
provide an estimate of the difference in biases for high altitudes at e.g. Ny-Ålesund, a GRUAN site showing the highest autocorrelation coefficients.
However, a detailed case study needs to be performed to investigate potential
benefits; this is beyond the scope of this study, which focuses on
describing and presenting the methodology.</p>
</sec>
<sec id="Ch1.S4" sec-type="conclusions">
  <title>Conclusions</title>
      <p id="d1e4003">We have used synthetic time series representing temperature
measurements to investigate the possibility of using interlaced measurements
performed with two different instruments types together with generalized
additive models to obtain an estimate of the difference in the bias between
the two instrument types. Performing dual radiosonde flights with both
instrument types is costly, and therefore we investigated the feasibility of
using interlaced flights to obtain an estimate of the difference in the bias.
This would be more sustainable and less costly. Information about typically
small differences in instrument biases can be obtained from non-simultaneous
measurements using a persistence assumption; i.e. some information from the
day's measurement is carried over to the next day. As atmospheric
temperatures tend to be autocorrelated in time <xref ref-type="bibr" rid="bib1.bibx20 bib1.bibx9" id="paren.23"><named-content content-type="pre">e.g.</named-content></xref>, the persistence assumption is justifiable. However, the strength
of the autocorrelation depends in part on the geographical location of the
measurement site and on altitude. Here we investigated how a statistical
approach to estimate the difference between two instrument biases is affected
by the persistence of a time series.</p>
      <p id="d1e4011">The results presented here indicate that while it is in principle possible to
estimate the difference between two instrument biases from interlaced
measurements, the number of interlaced flights required to obtain
a satisfying accuracy is very large for reasonable values of the
autocorrelation coefficient. Strongly autocorrelated signals require fewer
data for an accurate estimate of the difference in biases and therefore fewer
interlaced flights than time series with low autocorrelation. The results
show that for very strong persistence (e.g. an AR[1] coefficient of 0.99)
about twice the number of measurements is needed compared to parallel
measurements to obtain a comparable uncertainty in estimates for interlaced
measurements. Hence, the described approach may be used for measurements with
very strong persistence or for which the costs for sufficient parallel
measurements exceeds the costs for sufficient interlaced measurements to
confidently infer the difference in the instrument bias. However, if, for
example, it were possible to derive a robust estimate of the difference
in instrument biases from interlaced measurements in some reasonable time
period (e.g. 2 years) and even if this period was more than 2 or 3 times
longer than would be required from a dual measurement strategy to achieve the
same level of confidence, the interlacing approach would provide a cost-saving alternative to an approach that would start with dual flights and then continue
with flights using only the new instrument.</p>
</sec>

      
      </body>
    <back><notes notes-type="codedataavailability">

      <p id="d1e4018">The code can be obtained by contacting the
corresponding author. The GRUAN data used in this publication are available
from <uri>ftp://ftp.ncdc.noaa.gov/pub/data/gruan/processing/level2/</uri>
<xref ref-type="bibr" rid="bib1.bibx16" id="paren.24"/>.</p>
  </notes><notes notes-type="competinginterests">

      <p id="d1e4030">The authors declare that they have no conflict of
interest.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e4036">We would like to thank the NOAA GCOS office, through the Meteorological Service of New Zealand Limited, for supporting this
research. Henning W. Rust acknowledges support from the Freie Universität Berlin within the Excellence Initiative of the German Research
Foundation.  We would also like to thank Fabio Madonna and Alessandro Fasso for helpful discussion around the alternative approach of
interlaced measurements. We thank Matt Hanson and Jared Lewis for their initial comments on and contributions to the discussions about the
methodology. We thank the GCOS Reference
Upper-Air Network (GRUAN) for providing the data used in this publication.
The authors confirm that these data have been
used in a manner consistent with the GRUAN data use policy, as articulated in the GRUAN Guide, and have not been used for commercial
gain.<?xmltex \hack{\newline}?><?xmltex \hack{\newline}?>
Edited by: Roeland Van Malderen<?xmltex \hack{\newline}?>
Reviewed by: two anonymous referees</p></ack><ref-list>
    <title>References</title>

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    <!--<article-title-html>Is it feasible to estimate radiosonde biases from interlaced measurements?</article-title-html>
<abstract-html><p>Upper-air measurements of essential climate variables (ECVs), such as
temperature, are crucial for climate monitoring and climate change detection.
Because of the internal variability of the climate system, many decades of
measurements are typically required to robustly detect any trend in the
climate data record. It is imperative for the records to be temporally
homogeneous over many decades to confidently estimate any trend.
Historically, records of upper-air measurements were primarily made for
short-term weather forecasts and as such are seldom suitable for studying
long-term climate change as they lack the required continuity and
homogeneity. Recognizing this, the Global Climate Observing System (GCOS)
Reference Upper-Air Network (GRUAN) has been established to provide
reference-quality measurements of climate variables, such as temperature,
pressure, and humidity, together with well-characterized and traceable
estimates of the measurement uncertainty. To ensure that GRUAN data products
are suitable to detect climate change, a scientifically robust instrument
replacement strategy must always be adopted whenever there is a change in
instrumentation. By fully characterizing any systematic differences between
the old and new measurement system a temporally homogeneous data series can
be created. One strategy is to operate both the old and new instruments in
tandem for some overlap period to characterize any inter-instrument biases.
However, this strategy can be prohibitively expensive at measurement sites
operated by national weather services or research institutes. An alternative
strategy that has been proposed is to alternate between the old and new
instruments, so-called interlacing, and then statistically derive the
systematic biases between the two instruments. Here we investigate the
feasibility of such an approach specifically for radiosondes, i.e. flying the
old and new instruments on alternating days. Synthetic data sets are used to
explore the applicability of this statistical approach to radiosonde change
management.</p></abstract-html>
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