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  <front>
    <journal-meta><journal-id journal-id-type="publisher">AMT</journal-id><journal-title-group>
    <journal-title>Atmospheric Measurement Techniques</journal-title>
    <abbrev-journal-title abbrev-type="publisher">AMT</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Atmos. Meas. Tech.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1867-8548</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/amt-12-5547-2019</article-id><title-group><article-title>Evaluation of MOPITT Version 7 joint TIR–NIR <inline-formula><mml:math id="M1" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <?xmltex \hack{\break}?> retrievals with TCCON</article-title><alt-title>Evaluation of MOPITT V7J <inline-formula><mml:math id="M2" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> with TCCON</alt-title>
      </title-group><?xmltex \runningtitle{Evaluation of MOPITT V7J {$\chem{X_{{CO}}}$} with TCCON}?><?xmltex \runningauthor{J.~K. Hedelius et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Hedelius</surname><given-names>Jacob K.</given-names></name>
          <email>jacob.hedelius@atmosp.physics.utoronto.ca</email>
        <ext-link>https://orcid.org/0000-0003-2025-7519</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>He</surname><given-names>Tai-Long</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-7734-0076</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Jones</surname><given-names>Dylan B. A.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff21 aff22">
          <name><surname>Baier</surname><given-names>Bianca C.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Buchholz</surname><given-names>Rebecca R.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-8124-2455</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>De Mazière</surname><given-names>Martine</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Deutscher</surname><given-names>Nicholas M.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-2906-2577</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>Dubey</surname><given-names>Manvendra K.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-3492-790X</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff26 aff6 aff7">
          <name><surname>Feist</surname><given-names>Dietrich G.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-5890-6687</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Griffith</surname><given-names>David W. T.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-7986-1924</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff8">
          <name><surname>Hase</surname><given-names>Frank</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff9">
          <name><surname>Iraci</surname><given-names>Laura T.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-2859-5259</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff10">
          <name><surname>Jeseck</surname><given-names>Pascal</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff11 aff12">
          <name><surname>Kiel</surname><given-names>Matthäus</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-9784-962X</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff13">
          <name><surname>Kivi</surname><given-names>Rigel</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-8828-2759</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff14">
          <name><surname>Liu</surname><given-names>Cheng</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-3759-9219</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff15">
          <name><surname>Morino</surname><given-names>Isamu</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-2720-1569</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff16">
          <name><surname>Notholt</surname><given-names>Justus</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff17">
          <name><surname>Oh</surname><given-names>Young-Suk</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-8010-1597</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff15">
          <name><surname>Ohyama</surname><given-names>Hirofumi</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-2109-9874</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff18">
          <name><surname>Pollard</surname><given-names>David F.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-9923-2984</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff19">
          <name><surname>Rettinger</surname><given-names>Markus</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Roche</surname><given-names>Sébastien</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-2474-4744</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff11">
          <name><surname>Roehl</surname><given-names>Coleen M.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-5383-8462</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff8">
          <name><surname>Schneider</surname><given-names>Matthias</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-8452-0035</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff20">
          <name><surname>Shiomi</surname><given-names>Kei</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Strong</surname><given-names>Kimberly</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-9947-1053</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff19">
          <name><surname>Sussmann</surname><given-names>Ralf</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff21 aff22">
          <name><surname>Sweeney</surname><given-names>Colm</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-4517-0797</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff10">
          <name><surname>Té</surname><given-names>Yao</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff14">
          <name><surname>Uchino</surname><given-names>Osamu</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4 aff23">
          <name><surname>Velazco</surname><given-names>Voltaire A.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-1376-438X</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff24">
          <name><surname>Wang</surname><given-names>Wei</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff15">
          <name><surname>Warneke</surname><given-names>Thorsten</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff11 aff25">
          <name><surname>Wennberg</surname><given-names>Paul O.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-6126-3854</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Worden</surname><given-names>Helen M.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-5949-9307</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Wunch</surname><given-names>Debra</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-4924-0377</ext-link></contrib>
        <aff id="aff1"><label>1</label><institution>Department of Physics, University of Toronto, Toronto, Canada</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Atmospheric Chemistry Observations &amp; Modeling, National Center for Atmospheric Research, Boulder, Colorado, USA</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Royal Belgian Institute for Space Aeronomy (BIRA-IASB), Brussels, 1180, Belgium</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>Centre for Atmospheric Chemistry, School of Earth, Atmospheric and Life Sciences, University of Wollongong,<?xmltex \hack{\break}?>  Northfields Ave., Wollongong, NSW 2522, Australia</institution>
        </aff>
        <aff id="aff5"><label>5</label><institution>Earth and Environmental Sciences, Los Alamos National Laboratory, Los Alamos, New Mexico, USA</institution>
        </aff>
        <aff id="aff6"><label>6</label><institution>Institut für Physik der Atmosphäre, Deutsches Zentrum für Luft- und Raumfahrt, Oberpfaffenhofen, Germany</institution>
        </aff>
        <aff id="aff7"><label>7</label><institution>Max Planck Institute for Biogeochemistry, Jena, Germany</institution>
        </aff>
        <aff id="aff8"><label>8</label><institution>Institute of Meteorology and Climate Research (IMK-ASF), Karlsruhe Institute of Technology, Karlsruhe, Germany</institution>
        </aff>
        <aff id="aff9"><label>9</label><institution>NASA Ames Research Center, Mountain View, California, USA</institution>
        </aff>
        <aff id="aff10"><label>10</label><institution>LERMA-IPSL, Sorbonne Université, CNRS, Observatoire de Paris, PSL Université, 75005, Paris, France</institution>
        </aff>
        <aff id="aff11"><label>11</label><institution>Division of Geological and Planetary Sciences, California Institute of Technology, Pasadena, California, USA</institution>
        </aff>
        <aff id="aff12"><label>12</label><institution>Jet Propulsion Laboratory, California Institute of Technology, Pasadena, California, USA</institution>
        </aff>
        <aff id="aff13"><label>13</label><institution>Finnish Meteorological Institute, Sodankylä, Finland</institution>
        </aff>
        <aff id="aff14"><label>14</label><institution>School of Earth and Space Sciences, University of Science and Technology of China, Hefei, 230026, China</institution>
        </aff>
        <aff id="aff15"><label>15</label><institution>National Institute for Environmental Studies (NIES), Tsukuba, Japan</institution>
        </aff>
        <aff id="aff16"><label>16</label><institution>Institute of Environmental Physics, University of Bremen, Bremen, Germany</institution>
        </aff>
        <aff id="aff17"><label>17</label><institution>National Institute of Meteorological Sciences 33, Seohobuk-ro, Seogwipo-si, Jeju-do 63568, Republic of Korea</institution>
        </aff>
        <aff id="aff18"><label>18</label><institution>National Institute of Water and Atmospheric Research, Lauder, New Zealand</institution>
        </aff>
        <aff id="aff19"><label>19</label><institution>Institute of Meteorology and Climate Research (IMK-IFU), Karlsruhe Institute of Technology (KIT), Garmisch-Partenkirchen, Germany</institution>
        </aff>
        <aff id="aff20"><label>20</label><institution>Japan Aerospace Exploration Agency, 2-1-1 Sengen, Tsukuba, Ibaraki, Japan</institution>
        </aff>
        <aff id="aff21"><label>21</label><institution>Cooperative Institute for Research in Environmental Sciences, University of Colorado, Boulder, Colorado, USA</institution>
        </aff>
        <aff id="aff22"><label>22</label><institution>NOAA Earth System Research Laboratory, Boulder, Colorado, USA</institution>
        </aff>
        <aff id="aff23"><label>23</label><institution>Oscar M. Lopez Center for Climate Change Adaptation and Disaster Risk Management Foundation, Inc., Pasig City, Philippines</institution>
        </aff>
        <aff id="aff24"><label>24</label><institution>Key Laboratory of Environmental Optics and Technology, Anhui Institute of Optics and Fine Mechanics,<?xmltex \hack{\break}?>  Chinese Academy of Sciences, Hefei, 230031, China</institution>
        </aff>
        <aff id="aff25"><label>25</label><institution>Division of Engineering and Applied Science, California Institute of Technology, Pasadena, California, USA</institution>
        </aff>
        <aff id="aff26"><label>26</label><institution>Lehrstuhl für Physik der Atmosphäre, Ludwig-Maximilians-Universität München, Munich, Germany</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Jacob K. Hedelius (jacob.hedelius@atmosp.physics.utoronto.ca)</corresp></author-notes><pub-date><day>21</day><month>October</month><year>2019</year></pub-date>
      
      <volume>12</volume>
      <issue>10</issue>
      <fpage>5547</fpage><lpage>5572</lpage>
      <history>
        <date date-type="received"><day>20</day><month>May</month><year>2019</year></date>
           <date date-type="rev-request"><day>7</day><month>June</month><year>2019</year></date>
           <date date-type="rev-recd"><day>11</day><month>September</month><year>2019</year></date>
           <date date-type="accepted"><day>13</day><month>September</month><year>2019</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2019 Jacob K. Hedelius et al.</copyright-statement>
        <copyright-year>2019</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://amt.copernicus.org/articles/12/5547/2019/amt-12-5547-2019.html">This article is available from https://amt.copernicus.org/articles/12/5547/2019/amt-12-5547-2019.html</self-uri><self-uri xlink:href="https://amt.copernicus.org/articles/12/5547/2019/amt-12-5547-2019.pdf">The full text article is available as a PDF file from https://amt.copernicus.org/articles/12/5547/2019/amt-12-5547-2019.pdf</self-uri>
      <abstract><title>Abstract</title>
    <p id="d1e615">Observations of carbon monoxide (CO) from the Measurements Of Pollution In The Troposphere (MOPITT) instrument aboard the Terra spacecraft were expected to have an accuracy of 10 % prior to the launch in 1999. Here we evaluate MOPITT Version 7 joint (V7J) thermal-infrared and near-infrared (TIR–NIR) retrieval accuracy and precision and suggest ways to further improve the accuracy of the observations. We take five steps involving filtering or bias corrections to reduce scatter and bias in the data relative to other MOPITT soundings and ground-based measurements. (1) We apply a preliminary filtering scheme in which measurements over snow and ice are removed. (2) We find a systematic pairwise bias among the four MOPITT along-track detectors (pixels) on the order of 3–4 ppb with a small temporal trend, which we remove on a global scale using a temporally trended bias correction. (3) Using a small-region approximation (SRA), a new filtering scheme is developed and applied based on additional quality indicators such as the signal-to-noise ratio (SNR). After applying these new filters, the root-mean-squared error computed using the local median from the SRA over 16 years of global observations decreases from 3.84 to 2.55 ppb. (4) We also use the SRA to find variability in MOPITT retrieval anomalies that relates to retrieval parameters. We apply a bias correction to one parameter from this analysis. (5) After applying the previous bias corrections and filtering, we compare the MOPITT results with the GGG2014 ground-based Total Carbon Column Observing Network (TCCON) observations to obtain an overall global bias correction. These comparisons show that MOPITT V7J is biased high by about 6 %–8 %, which is similar to past studies using independent validation datasets on V6J. When using TCCON spectrometric column retrievals without the standard airmass correction or scaling to aircraft (WMO scale), the ground- and satellite-based observations overall agree to better than 0.5 %. GEOS-Chem data assimilations are used to estimate the influence of filtering and scaling to TCCON on global CO and tend to pull concentrations away from the prior fluxes and closer to the truth. We conclude with suggestions for further improving the MOPITT data products.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<?pagebreak page5548?><sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d1e627">Carbon monoxide (<inline-formula><mml:math id="M3" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>) is an important atmospheric trace gas. It is a tracer of pollution and atmospheric transport and plays an important role in the atmospheric hydroxyl (<inline-formula><mml:math id="M4" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>) budget. About 2800 Tg CO yr<inline-formula><mml:math id="M5" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> is emitted globally, with about 45 % of the emissions coming from oxidation of volatile organic compounds (VOCs – predominately methane and isoprene), about 25 % from biomass burning, 25 % from fossil-fuel and domestic-fuel burning, and the rest from vegetation, oceans, and geological activity <xref ref-type="bibr" rid="bib1.bibx66" id="paren.1"/>. It acts as an indirect greenhouse gas (GHG) as both a minor source of <inline-formula><mml:math id="M6" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and by affecting OH concentrations, which in turn affects the lifetime of methane. Its 100-year global warming potential per mass is 1.9 <xref ref-type="bibr" rid="bib1.bibx22" id="paren.2"/>. The ultimate fate for 90 % of <inline-formula><mml:math id="M7" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> is oxidation by OH to form carbon dioxide and <inline-formula><mml:math id="M8" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. <inline-formula><mml:math id="M9" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> has an average global lifetime of about 1–3 months, with a shorter lifetime in the tropics and a longer lifetime in the Southern Hemisphere extratropics <xref ref-type="bibr" rid="bib1.bibx46" id="paren.3"/>. The moderate lifetime of <inline-formula><mml:math id="M10" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> makes it a good tracer for both emissions and transport of pollution.</p>
      <p id="d1e714">The Measurements Of Pollution In The Troposphere (MOPITT) is a Canadian instrument  aboard the Terra Earth-observing satellite, launched in December 1999. <xref ref-type="bibr" rid="bib1.bibx16" id="text.4"/> describe the instrument in more detail, but briefly, it is a gas correlation radiometer with near-infrared (NIR) and thermal-infrared (TIR) channels. The primary MOPITT mission goal is to quantify <inline-formula><mml:math id="M11" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> in the Earth's atmosphere. Space-based observations of <inline-formula><mml:math id="M12" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> can provide greater spatial coverage than a few surface observations. However, space-based observations that rely on reflected (e.g., NIR) sunlight can be influenced by surface properties, airglow, and clouds and are more strongly affected by aerosol scattering than solar-viewing instruments. For MOPITT the TIR sensitivity depends on the strength of the temperature contrast between the surface and atmosphere, which is variable across the globe. Due to the physical limitations of passive Earth nadir-viewing remote sensing, satellite instruments often have lower information content per observation than ground-based instruments <xref ref-type="bibr" rid="bib1.bibx10" id="paren.5"><named-content content-type="pre">e.g.,</named-content></xref>, especially compared to the Total Carbon Column Observing Network (TCCON), which measures atmospheric absorption of the Sun’s radiance. Ground-based spectrometers often have higher spectral resolution and/or coverage as well as temporal resolution at an individual location. These differences between observing systems make intercomparisons useful in checking for and reducing biases.</p>
      <p id="d1e741">While MOPITT data are the longest satellite record of total column <inline-formula><mml:math id="M13" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx12" id="paren.6"/>, there are several other satellite instruments that measure column <inline-formula><mml:math id="M14" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>, and we mention a few of them here. SCIAMACHY (Scanning Imaging Absorption Spectrometer for Atmospheric CHartographY) aboard Envisat (Environmental Satellite) launched in March 2002 was first compared with ground-based observations in 2005 <xref ref-type="bibr" rid="bib1.bibx71" id="paren.7"/> and later compared with the larger TCCON and found to be biased about 10 ppb lower <xref ref-type="bibr" rid="bib1.bibx30" id="paren.8"/>. TROPOMI (TROPOspheric Monitoring Instrument) aboard the Sentinel-5 Precursor was launched in October 2017 and was found to be biased 6 ppb higher than TCCON, with the difference depending on location <xref ref-type="bibr" rid="bib1.bibx2" id="paren.9"/>. GOSAT-2 (Greenhouse gases Observing SATellite-2) was recently launched in October 2018, and TCCON will be used for its validation.</p>
      <?pagebreak page5549?><p id="d1e773">Most intercomparisons with MOPITT have used aircraft data <xref ref-type="bibr" rid="bib1.bibx9 bib1.bibx12 bib1.bibx13" id="paren.10"><named-content content-type="pre">e.g,</named-content></xref>. The first systematic validation of MOPITT <inline-formula><mml:math id="M15" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> with ground-based column measurements was by <xref ref-type="bibr" rid="bib1.bibx3" id="text.11"/>, who used the Network for the Detection of Atmospheric Composition Change (NDACC) mid-infrared retrievals. There have been some studies to compare observations from MOPITT with data from a few (three to six) TCCON sites <xref ref-type="bibr" rid="bib1.bibx54 bib1.bibx76" id="paren.12"><named-content content-type="pre">e.g,</named-content></xref>, but this is the first to use observations from all the sites in an intercomparison with MOPITT.
Continual comparisons of MOPITT observations with other systems ensure data quality and can be used to determine areas of improvement. This intercomparison exercise uses the MOPITT Version 7 joint (V7J) product and ground-based NIR observations from the TCCON.</p>
      <p id="d1e798">The rest of this paper is summarized as follows: Sect. <xref ref-type="sec" rid="Ch1.S2"/> describes the different instruments, systems, and datasets used in this study. Section <xref ref-type="sec" rid="Ch1.S3"/> describes our effort to derive filters for MOPITT data and to improve the single-sounding accuracy and precision using bias corrections. Section <xref ref-type="sec" rid="Ch1.S4"/> describes the MOPITT and TCCON comparisons, including sensitivity tests and a comparison of averaging kernels and information content. Section <xref ref-type="sec" rid="Ch1.S5"/> describes data assimilation tests where the GEOS-Chem model is used to estimate how filtering and bias correcting MOPITT data affects global fluxes. Finally we conclude in Sect. <xref ref-type="sec" rid="Ch1.S6"/> with a summary of practical considerations in this study along with suggestions on how MOPITT retrievals might be improved in future iterations, and we summarize our work in Sect. <xref ref-type="sec" rid="Ch1.S7"/>.</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Datasets</title>
<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>MOPITT</title>
      <p id="d1e829">The MOPITT instrument aboard the Terra satellite launched in December 1999 has been described elsewhere <xref ref-type="bibr" rid="bib1.bibx16" id="paren.13"/>. Briefly, it is a gas-filter correlation radiometer with eight optical channels, of which three have been used since August 2001 for <inline-formula><mml:math id="M16" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> observations, two in the TIR band (channels no. 5 and no. 7; <inline-formula><mml:math id="M17" display="inline"><mml:mrow><mml:mn mathvariant="normal">4.617</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.055</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M18" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>), and one in the NIR band (channel no. 6; <inline-formula><mml:math id="M19" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.334</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.011</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M20" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>). Each channel produces an “average” (A) and “difference” (D) radiance measurement. A linear detector array in each channel allows MOPITT to make observations at four different sounding locations simultaneously. The ground field of view is approximately <inline-formula><mml:math id="M21" display="inline"><mml:mrow><mml:mn mathvariant="normal">22</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow><mml:mo>×</mml:mo><mml:mn mathvariant="normal">22</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> for each sounding. Retrievals from among these four “footprints” or pixels were previously shown to have a bias compared to ground-based column measurements from the NDACC Infrared Working Group (IRWG) <xref ref-type="bibr" rid="bib1.bibx3" id="paren.14"/>. A moving mirror scans cross track for 29 “stares” in each direction for a swath that is approximately 650 km wide, and one back-and-forth sweep takes approximately 26 s.</p>
      <p id="d1e911"><?xmltex \hack{\newpage}?>Terra is in a daytime-descending (nighttime-ascending) Sun-synchronous orbit at an altitude of about 700 km, with a local Equator crossing time at around 10:30 LT (22:30 nighttime) and an inclination angle of 98.4<inline-formula><mml:math id="M22" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>. Terra makes 14–15 orbits daily, with an exact repeat time of 16 d. However, with its wide swath width, MOPITT is able to achieve near-global coverage every 3–4 d. The redundancies built into the MOPITT mission allowed for continued measurements after a cooler failure in May 2001 eliminated one of the two optical boards and the usefulness of channels 1–4, leaving channels 5–8 <xref ref-type="bibr" rid="bib1.bibx16" id="paren.15"/>. The impact of other early anomalies is minor. No abrupt changes since 2001 are expected to impact the retrievals, with the possible exception of annual hot calibrations, the latest of which being in March 2019 and a separate temporary cooler malfunction in July 2009. Due to the different instrument configuration from the early record, we only include MOPITT data from 2002 to 2017 (inclusive) in this study.</p>
      <p id="d1e927">There are different retrieval products corresponding to TIR-only (T) retrievals, NIR-only (N) retrievals, and TIR–NIR (J – joint) retrievals. We chose to make comparisons with the level 2 Version 7 joint (L2, V7J) product because it should theoretically contain the most information. <xref ref-type="bibr" rid="bib1.bibx9" id="text.16"/> noted that the V6 TIR–NIR product has the greatest vertical resolution but has large retrieval errors and bias drift. The TIR-only product has the highest stability, and the NIR only is best at total column <inline-formula><mml:math id="M23" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> retrievals. The MOPITT retrievals are performed on a logarithmic scale due to the large variability in <inline-formula><mml:math id="M24" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> in the atmosphere (<inline-formula><mml:math id="M25" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> order of magnitude). The state vector includes up to 10 vertical layers of <inline-formula><mml:math id="M26" display="inline"><mml:mrow><mml:msub><mml:mi>log⁡</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub><mml:mo>(</mml:mo><mml:msub><mml:mtext>VMR</mml:mtext><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> (dry volume-mixing ratios), surface temperature, and surface emissivity. Retrievals are performed on a grid of 100 hPa spaced layers up to 100 hPa (e.g., surface–900, 900–800 hPa; <xref ref-type="bibr" rid="bib1.bibx7" id="altparen.17"/>). The top layer retrieved is 100–50 hPa, and above that the prior VMR<inline-formula><mml:math id="M27" display="inline"><mml:msub><mml:mi/><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:msub></mml:math></inline-formula> from the model is used due to low sensitivity. The 50–0 hPa layer represents <inline-formula><mml:math id="M28" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.2</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.4</mml:mn></mml:mrow></mml:math></inline-formula>% (<inline-formula><mml:math id="M29" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula>) of the a priori <inline-formula><mml:math id="M30" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> column (1.3 % in SH and 1.0 % in NH). Fractions of <inline-formula><mml:math id="M31" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> in this layer compared to the total column are shown in Fig. S1 in the Supplement. The a priori value is from climatological output from the Community Atmosphere Model with Chemistry <xref ref-type="bibr" rid="bib1.bibx45" id="paren.18"><named-content content-type="pre">CAM-chem;</named-content></xref> and is described by <xref ref-type="bibr" rid="bib1.bibx9" id="text.19"/>. The a priori covariance matrix is described by <xref ref-type="bibr" rid="bib1.bibx8" id="text.20"/>. A total column is obtained by a weighted average of the layers, and this can be converted to a column-average dry-air mole fraction (denoted <inline-formula><mml:math id="M32" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) by dividing by the model total column of dry air included in the MOPITT V7 product that takes into account surface pressure and water content. We focus on only daytime soundings, which are defined as those with a solar zenith angle (SZA) less than 80<inline-formula><mml:math id="M33" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> in the retrieval. In the V7J data product the 100–0 hPa layer is an average of the 100–50 and 50–0 hPa layers, and we use the 100–0 hPa values for our 100–50 hPa layer but use values that are 48 % of this amount for 50–0 hPa based on recommendations of the MOPITT V5 user's guide.</p>
      <?pagebreak page5550?><p id="d1e1065">There are a number of previous studies that have compared MOPITT with different observing systems. Because the algorithm has been improved several times since the start of the mission, here we only list validation studies on Versions 6 (released in 2013) and 7 (released in 2016 and used in this study). Recently Version 8 was released (December 2018). Versions prior to 6 are no longer available (<uri>https://www2.acom.ucar.edu/mopitt/products</uri>, last access: 2 August 2018).
<xref ref-type="bibr" rid="bib1.bibx9" id="text.21"/> noticed a bias between the MOPITT V6J column retrievals and aircraft observations of <inline-formula><mml:math id="M34" display="inline"><mml:mrow><mml:mo>+</mml:mo><mml:mn mathvariant="normal">4.3</mml:mn></mml:mrow></mml:math></inline-formula> ppb (assuming an average total air column density of <inline-formula><mml:math id="M35" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.1</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">25</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> molec. cm<inline-formula><mml:math id="M36" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, roughly 5 % for a global 80 ppb average). They noted a correlation of <inline-formula><mml:math id="M37" display="inline"><mml:mrow><mml:mi>r</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.89</mml:mn></mml:mrow></mml:math></inline-formula> between the systems and a drift of only 0.15<inline-formula><mml:math id="M38" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>0.1 ppb yr<inline-formula><mml:math id="M39" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (<inline-formula><mml:math id="M40" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">0.18</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.12</mml:mn></mml:mrow></mml:math></inline-formula> %). The V6J retrievals had an overall positive bias at the surface and 800 hPa layers, a negative bias at the 600 and 400 hPa layers, and a positive bias again at the 200 hPa layer. The bias, drift, and correlation all depended on which data products were compared. Later, the V6J profiles were compared with aircraft measurements over the Amazon Basin <xref ref-type="bibr" rid="bib1.bibx11" id="paren.22"/>. Limited maximum aircraft altitudes precluded column retrieval comparisons, but <xref ref-type="bibr" rid="bib1.bibx11" id="text.23"/> noted maximum biases at the 800 hPa of <inline-formula><mml:math id="M41" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">27</mml:mn></mml:mrow></mml:math></inline-formula> %.</p>
      <p id="d1e1175">Three studies compared ground-based remote-sensing observations with those from MOPITT <xref ref-type="bibr" rid="bib1.bibx61 bib1.bibx76 bib1.bibx3" id="paren.24"/>. <xref ref-type="bibr" rid="bib1.bibx61" id="text.25"/> made comparisons between MOPITT V6J L3 and various ground-based remote-sensing sites in Eurasia. There is significant variability in the unadjusted comparisons for different sites in their study, which could be from the influence of averaging kernels <xref ref-type="bibr" rid="bib1.bibx64" id="paren.26"/>, but in general MOPITT observations were larger than ground-based observations. <xref ref-type="bibr" rid="bib1.bibx76" id="text.27"/> compared MOPITT V6J and IASI (Infrared Atmospheric Sounding Interferometer) satellite observations with ground-based observations in an urban site (Paris), a high-altitude site (Jungfraujoch), and a Southern Hemisphere site (Wollongong). They noted good agreement between space and ground-based observations with slopes of 0.91–0.99, with satellite observations being slightly lower. Recently, <xref ref-type="bibr" rid="bib1.bibx3" id="text.28"/> compared MOPITT V6 observations with those from 14 different ground-based NDACC sites between 78<inline-formula><mml:math id="M42" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S and 80<inline-formula><mml:math id="M43" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N and used data from August 2001 to February 2012 for comparisons with V6T, V6N, and V6J. We focus on their V6J comparison results. They found MOPITT to be generally biased high relative to the NDACC, and 11 sites have a bias less than 10 % over land. The all-station mean bias is 5.1 %, and the average correlation is <inline-formula><mml:math id="M44" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi>r</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.78</mml:mn></mml:mrow></mml:math></inline-formula>. They noted that the surface type (land or water) had little effect on validation statistics. However, they did note that validation results differed among pixels, and pixel 1 has the lowest correlation while pixel 3 has the highest correlation.</p>
      <p id="d1e1227"><xref ref-type="bibr" rid="bib1.bibx12" id="text.29"/> is the only systematic global validation study of the MOPITT V7 algorithm. They use aircraft measurements from the HIAPER Pole-to-Pole Observations (HIPPO) campaign and National Oceanic and Atmospheric Administration (NOAA) aircraft flask samples primarily over North America for their validation dataset. They describe the improvements included to create the V7 algorithm. They find that the V7J column observations have a smaller bias and larger <inline-formula><mml:math id="M45" display="inline"><mml:mi>r</mml:mi></mml:math></inline-formula> (1.4 ppb and 0.93, respectively) than the V6J product (3.8 ppb and 0.89).</p>
      <p id="d1e1239">While L1 includes radiance bias corrections, there are no empirical bias corrections to the physics-based retrieval in the L2 V7 MOPITT products. There are retrieval anomaly diagnostics included in the L2 product, but users need to define filters to use for their particular application. For L3, V7J daytime observations where both the signal-to-noise ratio (SNR) of channel no. 5A <inline-formula><mml:math id="M46" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">1000</mml:mn></mml:mrow></mml:math></inline-formula> and the SNR of channel no. 6A <inline-formula><mml:math id="M47" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">400</mml:mn></mml:mrow></mml:math></inline-formula> are excluded <xref ref-type="bibr" rid="bib1.bibx7" id="paren.30"/>. All observations from pixel 3 are also excluded due to excessive and unstable noise from NIR measurements from that pixel <xref ref-type="bibr" rid="bib1.bibx10" id="paren.31"/>. In this study suggested filters are developed along with a bias correction.</p>
</sec>
<sec id="Ch1.S2.SS2">
  <label>2.2</label><title>TCCON</title>
      <p id="d1e1276">The TCCON is a global network of independently operated solar-viewing Fourier-transform spectrometers (SV-FTS) operated under a common set of standards. From measurements taken by these spectrometers, retrieved estimates of <inline-formula><mml:math id="M48" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are made <xref ref-type="bibr" rid="bib1.bibx85 bib1.bibx87" id="paren.32"/>. Because profiles are not a part of the TCCON data product, we focus on validating the MOPITT total columns rather than profiles.  Data are quality screened by both individual site operators as well as a centralized team. From sensitivity tests perturbing the algorithm to each known source of uncertainty (e.g., a priori values of VMRs and temperature and surface pressure), GGG2014 <inline-formula><mml:math id="M49" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> systematic errors for TCCON are below 4 % <xref ref-type="bibr" rid="bib1.bibx87" id="paren.33"/>. The uncertainty in the scaling slope is 6 % (<inline-formula><mml:math id="M50" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula>).</p>
      <p id="d1e1317">One of the primary uses of the TCCON data has been satellite validation <xref ref-type="bibr" rid="bib1.bibx31 bib1.bibx44 bib1.bibx89" id="paren.34"><named-content content-type="pre">e.g.,</named-content></xref>. There are several reasons why TCCON data are considered more accurate than satellite observations and hence a good validation source. (1) Observations are directly pointed at the Sun, which increases the SNR, is insensitive to effects of surface properties, and is insensitive to the effects of both airglow and aerosol scattering <xref ref-type="bibr" rid="bib1.bibx93" id="paren.35"><named-content content-type="pre">e.g.,</named-content></xref>. (2) Instruments are operated at a resolution of at least 0.02 cm<inline-formula><mml:math id="M51" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, which provides more information for spectral fitting than most satellite measurements. (3) The network was established in 2004 with contributions from many different institutions. This international collaboration has led to many discoveries on how to reduce errors in <inline-formula><mml:math id="M52" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">gas</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> retrievals <xref ref-type="bibr" rid="bib1.bibx39" id="paren.36"><named-content content-type="pre">e.g.,</named-content></xref>.</p>
      <p id="d1e1358">Despite these advantages, there are known sources of uncertainty that could bias the measurements. For example, to tie this to the World Meteorological Organization (WMO) in situ scale, there is a 7 % scaling factor in GGG2014 for <inline-formula><mml:math id="M53" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx87" id="paren.37"/>. This factor is considered large<?pagebreak page5551?> compared to the current uncertainty in spectroscopy, and there is an ongoing effort to determine if this factor is appropriate. In this study we use both the official TCCON <inline-formula><mml:math id="M54" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> product as well as a derived product without the empirical scaling factor applied. For a discussion and current comparison of unscaled TCCON data to the WMO scale, see Sect. S2 in the Supplement.</p>
      <p id="d1e1386">We compare MOPITT with TCCON from mid-2004 to 2017 (inclusive). Prior to 2007 there were only four TCCON sites (Table <xref ref-type="table" rid="Ch1.T1"/>). During 2007 and 2008 the TCCON grew to nine sites. Table <xref ref-type="table" rid="Ch1.T1"/> also lists the site locations and number of coincidence days after MOPITT data are filtered.</p>

<?xmltex \floatpos{p}?><table-wrap id="Ch1.T1" specific-use="star"><?xmltex \currentcnt{1}?><label>Table 1</label><caption><p id="d1e1397">Details for TCCON sites used in this study. Occasionally one site had
more than one instrument, as indicated by multiple two-letter IDs.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.85}[.85]?><oasis:tgroup cols="8">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="left"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:colspec colnum="8" colname="col8" align="left"/>
     <oasis:thead>
       <oasis:row>

         <oasis:entry colname="col1">Site name</oasis:entry>

         <oasis:entry colname="col2">ID</oasis:entry>

         <oasis:entry colname="col3">Lat</oasis:entry>

         <oasis:entry colname="col4">Long</oasis:entry>

         <oasis:entry colname="col5">m a.s.l.</oasis:entry>

         <oasis:entry colname="col6">Operational</oasis:entry>

         <oasis:entry colname="col7">Days<inline-formula><mml:math id="M57" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col8">References</oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1"/>

         <oasis:entry colname="col2"/>

         <oasis:entry colname="col3"/>

         <oasis:entry colname="col4"/>

         <oasis:entry colname="col5"/>

         <oasis:entry colname="col6">dates<inline-formula><mml:math id="M58" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col7"/>

         <oasis:entry colname="col8"/>

       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">AFRC, Edwards, CA, USA</oasis:entry>

         <oasis:entry colname="col2">df</oasis:entry>

         <oasis:entry colname="col3">34.958<inline-formula><mml:math id="M59" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry colname="col4">117.882<inline-formula><mml:math id="M60" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W</oasis:entry>

         <oasis:entry colname="col5">699</oasis:entry>

         <oasis:entry colname="col6">Jul 2013–present</oasis:entry>

         <oasis:entry colname="col7">253</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx32" id="text.38"/></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Anmyeondo, South Korea</oasis:entry>

         <oasis:entry colname="col2">an</oasis:entry>

         <oasis:entry colname="col3">36.624<inline-formula><mml:math id="M61" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry colname="col4">126.331<inline-formula><mml:math id="M62" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E</oasis:entry>

         <oasis:entry colname="col5">30</oasis:entry>

         <oasis:entry colname="col6">Feb 2015–present</oasis:entry>

         <oasis:entry colname="col7">24</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx24" id="text.39"/></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Ascension Island</oasis:entry>

         <oasis:entry colname="col2">ae</oasis:entry>

         <oasis:entry colname="col3">7.917<inline-formula><mml:math id="M63" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S</oasis:entry>

         <oasis:entry colname="col4">14.332<inline-formula><mml:math id="M64" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W</oasis:entry>

         <oasis:entry colname="col5">10</oasis:entry>

         <oasis:entry colname="col6">May 2012–present</oasis:entry>

         <oasis:entry colname="col7">151</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx21" id="text.40"/></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Białystok, Poland</oasis:entry>

         <oasis:entry colname="col2">bi</oasis:entry>

         <oasis:entry colname="col3">53.23<inline-formula><mml:math id="M65" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry colname="col4">23.025<inline-formula><mml:math id="M66" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E</oasis:entry>

         <oasis:entry colname="col5">180</oasis:entry>

         <oasis:entry colname="col6">Mar 2009–Sep 2018</oasis:entry>

         <oasis:entry colname="col7">159</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx15" id="text.41"/></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Bremen, Germany</oasis:entry>

         <oasis:entry colname="col2">br</oasis:entry>

         <oasis:entry colname="col3">53.104<inline-formula><mml:math id="M67" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry colname="col4">8.850<inline-formula><mml:math id="M68" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E</oasis:entry>

         <oasis:entry colname="col5">27</oasis:entry>

         <oasis:entry colname="col6">Jan 2007–present</oasis:entry>

         <oasis:entry colname="col7">83</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx56" id="text.42"/></oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Burgos, Philippines</oasis:entry>

         <oasis:entry colname="col2">bu</oasis:entry>

         <oasis:entry colname="col3">18.553<inline-formula><mml:math id="M69" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry colname="col4">120.650<inline-formula><mml:math id="M70" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E</oasis:entry>

         <oasis:entry colname="col5">35</oasis:entry>

         <oasis:entry colname="col6">Mar 2017–present</oasis:entry>

         <oasis:entry colname="col7">31</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx53" id="text.43"/>,</oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1"/>

         <oasis:entry colname="col2"/>

         <oasis:entry colname="col3"/>

         <oasis:entry colname="col4"/>

         <oasis:entry colname="col5"/>

         <oasis:entry colname="col6"/>

         <oasis:entry colname="col7"/>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx77" id="text.44"/></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Caltech, Pasadena, CA, USA</oasis:entry>

         <oasis:entry colname="col2">ci</oasis:entry>

         <oasis:entry colname="col3">34.136<inline-formula><mml:math id="M71" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry colname="col4">118.127<inline-formula><mml:math id="M72" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W</oasis:entry>

         <oasis:entry colname="col5">237</oasis:entry>

         <oasis:entry colname="col6">Sep 2012–present</oasis:entry>

         <oasis:entry colname="col7">56</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx80" id="text.45"/></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Darwin, Australia</oasis:entry>

         <oasis:entry colname="col2">db</oasis:entry>

         <oasis:entry colname="col3">12.456<inline-formula><mml:math id="M73" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S</oasis:entry>

         <oasis:entry colname="col4">130.927<inline-formula><mml:math id="M74" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E</oasis:entry>

         <oasis:entry colname="col5">37</oasis:entry>

         <oasis:entry colname="col6">Aug 2005–present</oasis:entry>

         <oasis:entry colname="col7">599</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx25" id="text.46"/></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">East Trout Lake, Saskatchewan, Canada</oasis:entry>

         <oasis:entry colname="col2">et</oasis:entry>

         <oasis:entry colname="col3">54.354<inline-formula><mml:math id="M75" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry colname="col4">104.987<inline-formula><mml:math id="M76" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W</oasis:entry>

         <oasis:entry colname="col5">502</oasis:entry>

         <oasis:entry colname="col6">Oct 2016–present</oasis:entry>

         <oasis:entry colname="col7">28</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx88" id="text.47"/></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Eureka, Nunavut, Canada</oasis:entry>

         <oasis:entry colname="col2">eu</oasis:entry>

         <oasis:entry colname="col3">80.05<inline-formula><mml:math id="M77" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry colname="col4">86.42<inline-formula><mml:math id="M78" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W</oasis:entry>

         <oasis:entry colname="col5">610</oasis:entry>

         <oasis:entry colname="col6">Mar 2010–present</oasis:entry>

         <oasis:entry colname="col7">8</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx70" id="text.48"/></oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Four Corners, NM, USA</oasis:entry>

         <oasis:entry colname="col2">fc</oasis:entry>

         <oasis:entry colname="col3">36.797<inline-formula><mml:math id="M79" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry colname="col4">108.480<inline-formula><mml:math id="M80" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E</oasis:entry>

         <oasis:entry colname="col5">1643</oasis:entry>

         <oasis:entry colname="col6">Mar 2013–Oct 2013</oasis:entry>

         <oasis:entry colname="col7">22</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx18" id="text.49"/>,</oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1"/>

         <oasis:entry colname="col2"/>

         <oasis:entry colname="col3"/>

         <oasis:entry colname="col4"/>

         <oasis:entry colname="col5"/>

         <oasis:entry colname="col6"/>

         <oasis:entry colname="col7"/>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx47" id="text.50"/></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Garmisch, Germany</oasis:entry>

         <oasis:entry colname="col2">gm</oasis:entry>

         <oasis:entry colname="col3">47.476<inline-formula><mml:math id="M81" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry colname="col4">11.063<inline-formula><mml:math id="M82" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E</oasis:entry>

         <oasis:entry colname="col5">743</oasis:entry>

         <oasis:entry colname="col6">Jul 2007–present</oasis:entry>

         <oasis:entry colname="col7">153</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx72" id="text.51"/></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Hefei, China</oasis:entry>

         <oasis:entry colname="col2">hf</oasis:entry>

         <oasis:entry colname="col3">31.90<inline-formula><mml:math id="M83" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry colname="col4">117.17<inline-formula><mml:math id="M84" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E</oasis:entry>

         <oasis:entry colname="col5">29</oasis:entry>

         <oasis:entry colname="col6">Sep 2015–Dec 2016</oasis:entry>

         <oasis:entry colname="col7">17</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx48" id="text.52"/></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Indianapolis, IN, USA</oasis:entry>

         <oasis:entry colname="col2">if</oasis:entry>

         <oasis:entry colname="col3">39.861<inline-formula><mml:math id="M85" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry colname="col4">86.004<inline-formula><mml:math id="M86" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W</oasis:entry>

         <oasis:entry colname="col5">270</oasis:entry>

         <oasis:entry colname="col6">Aug 2012–Dec 2012</oasis:entry>

         <oasis:entry colname="col7">18</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx33" id="text.53"/></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Izaña, Tenerife, Spain</oasis:entry>

         <oasis:entry colname="col2">iz</oasis:entry>

         <oasis:entry colname="col3">28.3<inline-formula><mml:math id="M87" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry colname="col4">16.5<inline-formula><mml:math id="M88" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W</oasis:entry>

         <oasis:entry colname="col5">2370</oasis:entry>

         <oasis:entry colname="col6">May 2007–present</oasis:entry>

         <oasis:entry colname="col7">65</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx1" id="text.54"/></oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">JPL, Pasadena,</oasis:entry>

         <oasis:entry colname="col2">jc</oasis:entry>

         <oasis:entry rowsep="1" colname="col3" morerows="1">34.202<inline-formula><mml:math id="M89" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry rowsep="1" colname="col4" morerows="1">118.175<inline-formula><mml:math id="M90" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W</oasis:entry>

         <oasis:entry rowsep="1" colname="col5" morerows="1">390</oasis:entry>

         <oasis:entry colname="col6">Jul 2007–Jun 2008</oasis:entry>

         <oasis:entry colname="col7">10</oasis:entry>

         <oasis:entry rowsep="1" colname="col8" morerows="1"><xref ref-type="bibr" rid="bib1.bibx81 bib1.bibx82" id="text.55"/></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">CA, USA</oasis:entry>

         <oasis:entry colname="col2">jf</oasis:entry>

         <oasis:entry colname="col6">May 2011–May 2018</oasis:entry>

         <oasis:entry colname="col7">19</oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Karlsruhe, Germany</oasis:entry>

         <oasis:entry colname="col2">ka</oasis:entry>

         <oasis:entry colname="col3">49.100<inline-formula><mml:math id="M91" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry colname="col4">8.439<inline-formula><mml:math id="M92" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E</oasis:entry>

         <oasis:entry colname="col5">116</oasis:entry>

         <oasis:entry colname="col6">Apr 2010–present</oasis:entry>

         <oasis:entry colname="col7">136</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx27" id="text.56"/></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Lamont, OK, USA</oasis:entry>

         <oasis:entry colname="col2">oc</oasis:entry>

         <oasis:entry colname="col3">36.604<inline-formula><mml:math id="M93" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry colname="col4">97.486<inline-formula><mml:math id="M94" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W</oasis:entry>

         <oasis:entry colname="col5">320</oasis:entry>

         <oasis:entry colname="col6">Jul 2008–present</oasis:entry>

         <oasis:entry colname="col7">593</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx83" id="text.57"/></oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Lauder, New Zealand</oasis:entry>

         <oasis:entry colname="col2">lh, ll</oasis:entry>

         <oasis:entry colname="col3">45.038<inline-formula><mml:math id="M95" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S</oasis:entry>

         <oasis:entry colname="col4">169.684<inline-formula><mml:math id="M96" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E</oasis:entry>

         <oasis:entry colname="col5">370</oasis:entry>

         <oasis:entry colname="col6">Jun 2004–present</oasis:entry>

         <oasis:entry colname="col7">150</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx68 bib1.bibx69" id="text.58"/>,</oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1"/>

         <oasis:entry colname="col2"/>

         <oasis:entry colname="col3"/>

         <oasis:entry colname="col4"/>

         <oasis:entry colname="col5"/>

         <oasis:entry colname="col6"/>

         <oasis:entry colname="col7"/>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx60" id="text.59"/></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Manaus, Brazil</oasis:entry>

         <oasis:entry colname="col2">ma</oasis:entry>

         <oasis:entry colname="col3">3.213<inline-formula><mml:math id="M97" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S</oasis:entry>

         <oasis:entry colname="col4">60.598<inline-formula><mml:math id="M98" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W</oasis:entry>

         <oasis:entry colname="col5">50</oasis:entry>

         <oasis:entry colname="col6">Oct 2014–Jun 2015</oasis:entry>

         <oasis:entry colname="col7">3</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx17" id="text.60"/></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Ny-ålesund, Spitsbergen, Norway</oasis:entry>

         <oasis:entry colname="col2">sp</oasis:entry>

         <oasis:entry colname="col3">78.923<inline-formula><mml:math id="M99" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry colname="col4">11.923<inline-formula><mml:math id="M100" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E</oasis:entry>

         <oasis:entry colname="col5">20</oasis:entry>

         <oasis:entry colname="col6">Mar 2006–present</oasis:entry>

         <oasis:entry colname="col7">79</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx57" id="text.61"/></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Orléans, France</oasis:entry>

         <oasis:entry colname="col2">or</oasis:entry>

         <oasis:entry colname="col3">47.997<inline-formula><mml:math id="M101" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry colname="col4">2.113<inline-formula><mml:math id="M102" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E</oasis:entry>

         <oasis:entry colname="col5">130</oasis:entry>

         <oasis:entry colname="col6">Aug 2009–present</oasis:entry>

         <oasis:entry colname="col7">138</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx78" id="text.62"/></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Paris, France</oasis:entry>

         <oasis:entry colname="col2">pr</oasis:entry>

         <oasis:entry colname="col3">48.846<inline-formula><mml:math id="M103" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry colname="col4">2.356<inline-formula><mml:math id="M104" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E</oasis:entry>

         <oasis:entry colname="col5">60</oasis:entry>

         <oasis:entry colname="col6">Sep 2014–present</oasis:entry>

         <oasis:entry colname="col7">40</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx75" id="text.63"/></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Park Falls, WI, USA</oasis:entry>

         <oasis:entry colname="col2">pa</oasis:entry>

         <oasis:entry colname="col3">45.945<inline-formula><mml:math id="M105" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry colname="col4">90.273<inline-formula><mml:math id="M106" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W</oasis:entry>

         <oasis:entry colname="col5">473</oasis:entry>

         <oasis:entry colname="col6">Jun 2004–present</oasis:entry>

         <oasis:entry colname="col7">435</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx79" id="text.64"/></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Réunion Island</oasis:entry>

         <oasis:entry colname="col2">ra</oasis:entry>

         <oasis:entry colname="col3">20.091<inline-formula><mml:math id="M107" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S</oasis:entry>

         <oasis:entry colname="col4">55.485<inline-formula><mml:math id="M108" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E</oasis:entry>

         <oasis:entry colname="col5">87</oasis:entry>

         <oasis:entry colname="col6">Sep 2011–present</oasis:entry>

         <oasis:entry colname="col7">275</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx6" id="text.65"/></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Rikubetsu, Japan</oasis:entry>

         <oasis:entry colname="col2">rj</oasis:entry>

         <oasis:entry colname="col3">43.457<inline-formula><mml:math id="M109" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry colname="col4">143.766<inline-formula><mml:math id="M110" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E</oasis:entry>

         <oasis:entry colname="col5">380</oasis:entry>

         <oasis:entry colname="col6">Nov 2013–present</oasis:entry>

         <oasis:entry colname="col7">12</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx52" id="text.66"/></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Saga, Japan</oasis:entry>

         <oasis:entry colname="col2">js</oasis:entry>

         <oasis:entry colname="col3">33.241<inline-formula><mml:math id="M111" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry colname="col4">130.288<inline-formula><mml:math id="M112" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E</oasis:entry>

         <oasis:entry colname="col5">7</oasis:entry>

         <oasis:entry colname="col6">Jul 2011–present</oasis:entry>

         <oasis:entry colname="col7">136</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx38" id="text.67"/></oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Sodankylä, Finland</oasis:entry>

         <oasis:entry colname="col2">so</oasis:entry>

         <oasis:entry colname="col3">67.367<inline-formula><mml:math id="M113" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry colname="col4">26.631<inline-formula><mml:math id="M114" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E</oasis:entry>

         <oasis:entry colname="col5">188</oasis:entry>

         <oasis:entry colname="col6">May 2009–present</oasis:entry>

         <oasis:entry colname="col7">241</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx42" id="text.68"/>,</oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1"/>

         <oasis:entry colname="col2"/>

         <oasis:entry colname="col3"/>

         <oasis:entry colname="col4"/>

         <oasis:entry colname="col5"/>

         <oasis:entry colname="col6"/>

         <oasis:entry colname="col7"/>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx41" id="text.69"/></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Tsukuba, Japan</oasis:entry>

         <oasis:entry colname="col2">tk</oasis:entry>

         <oasis:entry colname="col3">36.051<inline-formula><mml:math id="M115" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry colname="col4">140.122<inline-formula><mml:math id="M116" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E</oasis:entry>

         <oasis:entry colname="col5">31</oasis:entry>

         <oasis:entry colname="col6">Aug 2011–present</oasis:entry>

         <oasis:entry colname="col7">66</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx51" id="text.70"/></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Wollongong, Australia</oasis:entry>

         <oasis:entry colname="col2">wg</oasis:entry>

         <oasis:entry colname="col3">34.406<inline-formula><mml:math id="M117" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry colname="col4">150.879<inline-formula><mml:math id="M118" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E</oasis:entry>

         <oasis:entry colname="col5">30</oasis:entry>

         <oasis:entry colname="col6">Jun 2008–present</oasis:entry>

         <oasis:entry colname="col7">342</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx26" id="text.71"/></oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Zugspitze, Germany</oasis:entry>

         <oasis:entry colname="col2">zs</oasis:entry>

         <oasis:entry colname="col3">47.42<inline-formula><mml:math id="M119" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N</oasis:entry>

         <oasis:entry colname="col4">10.98<inline-formula><mml:math id="M120" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E</oasis:entry>

         <oasis:entry colname="col5">2960</oasis:entry>

         <oasis:entry colname="col6">Apr 2015–present</oasis:entry>

         <oasis:entry colname="col7">42</oasis:entry>

         <oasis:entry colname="col8"><xref ref-type="bibr" rid="bib1.bibx73" id="text.72"/></oasis:entry>

       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table><?xmltex \begin{scaleboxenv}{.9}[.9]?><table-wrap-foot><p id="d1e1400"><?xmltex \hack{\vspace*{2mm}}?><inline-formula><mml:math id="M55" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula> Operational dates refer to time range where public
GGG2014 retrievals are available. <inline-formula><mml:math id="M56" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula> Coincidence days only and after filtering MOPITT data.</p></table-wrap-foot><?xmltex \end{scaleboxenv}?></table-wrap>

</sec>
<sec id="Ch1.S2.SS3">
  <label>2.3</label><title>AirCore</title>
      <p id="d1e3092">AirCore measurements are a novel way to vertically sample the atmosphere to obtain profiles of various gases and have been described elsewhere <xref ref-type="bibr" rid="bib1.bibx37 bib1.bibx50" id="paren.73"/>. Briefly, a coiled tube on the order of 100–300 m long, with an inner diameter on the order of 2–5 mm, is taken to altitude. One end of the tube is sealed, so during ascent it is evacuated and on descent the tube slowly fills with ambient air. Because diffusion is slow over the length of the tube but fast across the 2–5 mm diameter of the tube, air from different altitudes does not mix significantly. Upon landing the vertical profile of the gas is preserved along the length of the tube, with high altitudes near the closed end and low altitudes near the open end. On the ground, the AirCore is analyzed within a few hours, which minimizes molecular diffusion. By pulling the air through and measuring concentrations with a calibrated trace-gas analyzer, a vertical profile can be obtained. AirCore <inline-formula><mml:math id="M121" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> is still a developmental product with a sample measurement precision typically less than 5 ppb <xref ref-type="bibr" rid="bib1.bibx20" id="paren.74"/>. However, stratospheric AirCore <inline-formula><mml:math id="M122" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> profile comparisons have shown differences as large as 20 ppb, which could be a result of diffusion in stratospheric AirCore samples, AirCore surface effects, or incorrect AirCore sample end-member assumptions. Accuracy is dependent on the quality of calibration and standards (see Sect. S2).</p>
      <p id="d1e3117">Often AirCores are flown on balloons that can reach a ceiling of around 30 km (<inline-formula><mml:math id="M123" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula> hPa), depending on the type of balloon. Once altitude is reached, the payload is cut away from the balloon. Higher-altitude data (during rapid descent) often need to be discarded; hence 22 km (<inline-formula><mml:math id="M124" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">40</mml:mn></mml:mrow></mml:math></inline-formula> hPa) is the median highest altitude in this dataset. The vertical resolution depends on AirCore tubing dimensions, measurement altitude, recovery time, and temperature but is on the order of 200–1000 m. From 2012 to 2017 there are 36 AirCore profiles available. AirCore profiles are used among other profile measurements to tie TCCON retrievals to the WMO scale <xref ref-type="bibr" rid="bib1.bibx87" id="paren.75"/>. Here we use them for sensitivity tests when an approximation of the true atmospheric profile is needed.</p><?xmltex \hack{\newpage}?>
</sec>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Quality control filters and bias correction</title>
      <p id="d1e3153">Typically a retrieved state vector <inline-formula><mml:math id="M125" display="inline"><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover></mml:math></inline-formula> (e.g., an atmospheric profile) is described as a linearization about the a priori state vector <inline-formula><mml:math id="M126" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx63" id="paren.76"/>, i.e.,
          <disp-formula id="Ch1.E1" content-type="numbered"><label>1</label><mml:math id="M127" display="block"><mml:mrow><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:mi mathvariant="bold">A</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">ϵ</mml:mi><mml:mi>x</mml:mi></mml:msub><mml:mfenced close=")" open="("><mml:mrow><mml:mi mathvariant="bold-italic">b</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="bold-italic">c</mml:mi></mml:mrow></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
        In this equation, <inline-formula><mml:math id="M128" display="inline"><mml:mi mathvariant="bold">A</mml:mi></mml:math></inline-formula> is the averaging kernel, a matrix in this case, with elements <inline-formula><mml:math id="M129" display="inline"><mml:mrow><mml:msub><mml:mi>A</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M130" display="inline"><mml:mi mathvariant="bold-italic">x</mml:mi></mml:math></inline-formula> is the true state vector. The term <inline-formula><mml:math id="M131" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">ϵ</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is a catch-all for any remaining systematic or random uncertainties from instrument calibration or the retrieval. This term is a function of forward-model parameters not perfectly known (<inline-formula><mml:math id="M132" display="inline"><mml:mi mathvariant="bold-italic">b</mml:mi></mml:math></inline-formula>), such as pressure, temperature, pointing, spectroscopy, and modeling of instrument response (e.g., the instrument line shape). <inline-formula><mml:math id="M133" display="inline"><mml:mi mathvariant="bold-italic">c</mml:mi></mml:math></inline-formula> contains other values in the retrieval not used in the forward model, such as convergence criteria.
Changes in <inline-formula><mml:math id="M134" display="inline"><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover></mml:math></inline-formula> may thus be related to changes in <inline-formula><mml:math id="M135" display="inline"><mml:mi mathvariant="bold-italic">b</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M136" display="inline"><mml:mi mathvariant="bold-italic">c</mml:mi></mml:math></inline-formula>. Biases in <inline-formula><mml:math id="M137" display="inline"><mml:mi mathvariant="bold-italic">b</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M138" display="inline"><mml:mi mathvariant="bold-italic">c</mml:mi></mml:math></inline-formula> may be approximated as having a linear effect on <inline-formula><mml:math id="M139" display="inline"><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx62" id="paren.77"/>. However, these effects may not be accounted for in models, so measurement teams may reduce the effects of these spurious variations by filtering data empirically.</p>
      <p id="d1e3359">For example, empirical corrections are employed for various gases in the final TCCON products after the physics-based retrievals to improve accuracy up to about 0.1 %, which would otherwise be currently limited to accuracies of about of 2 %–3 % due to spectroscopic uncertainties, especially in <inline-formula><mml:math id="M140" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx86 bib1.bibx87" id="paren.78"/>. As a second example, empirical corrections to <inline-formula><mml:math id="M141" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> measurements from the Orbiting Carbon Observatory-2 (OCO-2) satellite (launched in 2014) did not always improve data at all scales but did reveal areas where the algorithm could be improved <xref ref-type="bibr" rid="bib1.bibx58 bib1.bibx40" id="paren.79"/>. Though their studies were for <inline-formula><mml:math id="M142" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, we apply many of the same methods for <inline-formula><mml:math id="M143" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>, including similar truth proxies.</p>
      <p id="d1e3410">By comparing retrieved data with a truth proxy, some data may stand out as being possibly biased due to the <inline-formula><mml:math id="M144" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">ϵ</mml:mi><mml:mi>x</mml:mi></mml:msub><mml:mfenced close=")" open="("><mml:mrow><mml:mi mathvariant="bold-italic">b</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="bold-italic">c</mml:mi></mml:mrow></mml:mfenced></mml:mrow></mml:math></inline-formula> term. These may be filtered out, deweighted, or bias corrected to improve the final product. It is challenging to define a truth proxy because if the true state of the atmosphere were known a priori, the measurement would not be needed in the first place. Rather than using proxies that work for each measurement, we aggregate many measurements to empirically identify artifacts and outliers. We use TCCON and a small-region approximation (SRA – also known as small-area approximation or variation in other studies) as truth proxies. For the SRA we assume that over a sufficiently small region (e.g., <inline-formula><mml:math id="M145" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">100</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow><mml:mo>×</mml:mo><mml:mn mathvariant="normal">100</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>) that is far from point sources the atmosphere is approximately homogeneous and outliers are due to inadequacies in the retrieval.</p>
      <p id="d1e3454">Filter selection and biases are interdependent; thus our quality-control (QC) and bias-correction process was iterative.</p>
<?pagebreak page5553?><sec id="Ch1.S3.SS1">
  <label>3.1</label><title>Pixel-to-pixel bias</title>
      <p id="d1e3465"><xref ref-type="bibr" rid="bib1.bibx3" id="text.80"/> observed biases among the four MOPITT pixels. This bias significantly affects our SRA (Sect. <xref ref-type="sec" rid="Ch1.S3.SS2"/>), as a biased value may be chosen as the median. We spatially grid the data in <inline-formula><mml:math id="M146" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> bins and average for each pixel separately over monthly timescales to evaluate variability in the bias. Here and throughout, data are averaged as described in Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/>. We analyze multiple months but here show results from April and November 2016 in Fig. <xref ref-type="fig" rid="Ch1.F1"/> for the difference between pixels 2 and 4. We choose these two pixels because the instrumental noise is larger for pixel 3 <xref ref-type="bibr" rid="bib1.bibx10" id="paren.81"/> and pixel 1 has a known large global bias <xref ref-type="bibr" rid="bib1.bibx3" id="paren.82"/>, and we would therefore expect the difference between pixels 2 and 4 to be a lower bound on pixel-to-pixel bias. We see large pixel-to-pixel bias polewards of 60<inline-formula><mml:math id="M147" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>. Comparing with scenes flagged as snowy or icy by retrievals from MODIS (Moderate Resolution Imaging Spectroradiometer; also aboard Terra), we see that there is some correlation between the bias with the snow or ice scenes. This bias can be positive or negative. For example, we see that pixel 2 is lower than pixel 4 towards the North Pole and is biased positively over land in Antarctica. Over sea ice around Antarctica, pixel 2 is lower than pixel 4. We also compare pixels 1 and 3 to the weighted mean and find that pixel 3 is biased low over land snow or ice and pixel 1 is biased high over both land and water snow or ice. These biases likely arise from the effects snow or ice have on the thermal contrast of the surface and hence affect the TIR channels. For the rest of our analysis, we filter for daytime scenes and remove soundings where the MODIS diagnostics indicate the presence of any snow or ice.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><?xmltex \currentcnt{1}?><label>Figure 1</label><caption><p id="d1e3514">On the left <bold>(a, b)</bold> are average differences in <inline-formula><mml:math id="M148" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> between pixels 2 and 4. On the right <bold>(c, d)</bold> is the corresponding MODIS snow or ice flag, where 0 indicates all snow or ice and 1 indicates that the scenes were clear of snow or ice. Some correlation is observed between bins with a large pixel-to-pixel bias and snow or ice cover. Here and throughout we use an Eckert IV equal-area projection.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://amt.copernicus.org/articles/12/5547/2019/amt-12-5547-2019-f01.png"/>

        </fig>

      <p id="d1e3540">We examine temporal trends in MOPITT pixel bias compared to the weighted mean from all pixels (Fig. <xref ref-type="fig" rid="Ch1.F2"/>). Data are averaged globally for each pixel and surface type separately for 15 d bins. This analysis relies on the assumption that on average each pixel samples the same area. We see that the absolute bias of pixel 1 is largest. However, in contrast with <xref ref-type="bibr" rid="bib1.bibx3" id="text.83"/>, we observe a negative rather than positive bias between pixel 1 and the mean in the TIR–NIR retrievals, which may be because their study was of V6 data. Pixel 3 has a smaller absolute bias that is positive. In 2002, the spread of the biases is larger than in 2017. On average, the land and water biases are similar (within 0.4 ppb); however, there is a larger seasonal cycle (<inline-formula><mml:math id="M149" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">1.5</mml:mn></mml:mrow></mml:math></inline-formula> ppb) in the bias for the land that may be an artifact of the sampling and averaging global 15 d bins.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2" specific-use="star"><?xmltex \currentcnt{2}?><label>Figure 2</label><caption><p id="d1e3561">Pixel (pxl) biases compared to the weighted mean with time. Data are averaged into 15 d bins separated for land and water soundings. The mean of pixels 1, 2, and 4 is also shown because pixel-3 data are not included in the L3 product. The small gap in 2009 is from a temporary cooler malfunction on 28 July.</p></caption>
          <?xmltex \igopts{width=369.885827pt}?><graphic xlink:href="https://amt.copernicus.org/articles/12/5547/2019/amt-12-5547-2019-f02.png"/>

        </fig>

      <p id="d1e3570">One consideration for bias corrections is whether accounting for differences in averaging kernels can account for the bias. <xref ref-type="bibr" rid="bib1.bibx3" id="text.84"/> noticed a large absolute bias for pixel 1 compared with NDACC observations even after accounting for averaging kernels. To examine the effects of averaging kernels, we find MOPITT soundings within an ellipse (<inline-formula><mml:math id="M150" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> latitude, <inline-formula><mml:math id="M151" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.5</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> longitude) around the center location of AirCore flights on the same day. There are 20 flights with coincident observations and 1933 total corresponding MOPITT soundings. We apply averaging kernels to create simulated MOPITT column retrievals from AirCore profile measurements:
            <disp-formula id="Ch1.E2" content-type="numbered"><label>2</label><mml:math id="M152" display="block"><mml:mrow><mml:mover accent="true"><mml:mi>c</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msubsup><mml:mi mathvariant="bold-italic">a</mml:mi><mml:mi mathvariant="normal">M</mml:mi><mml:mi mathvariant="normal">T</mml:mi></mml:msubsup><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>log⁡</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi>log⁡</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where <inline-formula><mml:math id="M153" display="inline"><mml:mover accent="true"><mml:mi>c</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover></mml:math></inline-formula> is the simulated <inline-formula><mml:math id="M154" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M155" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the a priori column <inline-formula><mml:math id="M156" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. <inline-formula><mml:math id="M157" display="inline"><mml:mi mathvariant="bold-italic">x</mml:mi></mml:math></inline-formula> is the dry VMR profile (from AirCore) and should not be confused with the state vector, which is <inline-formula><mml:math id="M158" display="inline"><mml:mrow><mml:msub><mml:mi>log⁡</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub><mml:mfenced open="(" close=")"><mml:mtext>VMR</mml:mtext></mml:mfenced></mml:mrow></mml:math></inline-formula>  for MOPITT. For this study we have defined the MOPITT column-averaging kernel for a pressure level <inline-formula><mml:math id="M159" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula> to be (Appendix <xref ref-type="sec" rid="App1.Ch1.S2"/>)
            <disp-formula id="Ch1.E3" content-type="numbered"><label>3</label><mml:math id="M160" display="block"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mrow><mml:mi mathvariant="normal">M</mml:mi><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi>i</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>c</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>log⁡</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub><mml:msub><mml:mi>x</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mi>ln⁡</mml:mi><mml:mn mathvariant="normal">10</mml:mn><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mi>j</mml:mi><mml:mi>n</mml:mi></mml:munderover><mml:msub><mml:mi>h</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:msub><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mi>j</mml:mi></mml:msub><mml:msub><mml:mi>A</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
          The pressure weighting function <inline-formula><mml:math id="M161" display="inline"><mml:mi mathvariant="bold-italic">h</mml:mi></mml:math></inline-formula> has been described by <xref ref-type="bibr" rid="bib1.bibx4" id="text.85"/> and <xref ref-type="bibr" rid="bib1.bibx84" id="text.86"/>. We find that the maximum bias for the retrieved columns is between pixels 1 and 4 and is about 8 times larger for the retrieved (2.6 ppb) than for the simulated columns (0.3 ppb; Table <xref ref-type="table" rid="Ch1.T2"/>). For these soundings MOPITT is also biased high compared to the AirCore simulated columns by 3.3 ppb, which is greater than the bias of 0.5–1.4 ppb compared to other aircraft profiles <xref ref-type="bibr" rid="bib1.bibx12" id="paren.87"/>.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2"><?xmltex \currentcnt{2}?><label>Table 2</label><caption><p id="d1e3829">Mean values of MOPITT <inline-formula><mml:math id="M162" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> retrievals, colocated with AirCore measurements and separated by pixel, compared to the simulated <inline-formula><mml:math id="M163" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> from applying MOPITT averaging kernels to AirCore profiles for 22 flights.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Retrieved mean</oasis:entry>
         <oasis:entry colname="col3">Simulated mean</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">(ppb)</oasis:entry>
         <oasis:entry colname="col3">(ppb)</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Pixel 1</oasis:entry>
         <oasis:entry colname="col2">86.0</oasis:entry>
         <oasis:entry colname="col3">84.1</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Pixel 2</oasis:entry>
         <oasis:entry colname="col2">87.7</oasis:entry>
         <oasis:entry colname="col3">84.3</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Pixel 3</oasis:entry>
         <oasis:entry colname="col2">88.3</oasis:entry>
         <oasis:entry colname="col3">84.5</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Pixel 4</oasis:entry>
         <oasis:entry colname="col2">88.6</oasis:entry>
         <oasis:entry colname="col3">84.4</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e3941">We make a preliminary pixel bias correction by adjusting soundings over land and water for each pixel separately based on a linear fit to the overall time series shown in Fig. <xref ref-type="fig" rid="Ch1.F2"/>. This fit is later improved after filtering (Sect. <xref ref-type="sec" rid="Ch1.S3.SS4"/>). After this adjustment we noticed some residual bias among the histograms, so we also apply a year-to-year pixel bias correction of up to 0.4 ppb that is the same for water and land.</p>
</sec>
<sec id="Ch1.S3.SS2">
  <label>3.2</label><title>Small-region approximation</title>
      <p id="d1e3956">We perform a SRA on the dataset with the preliminary filter for daytime and snow or ice free scenes and preliminary pixel bias correction. In a SRA, data within a specified area and time frame are assumed to be homogeneous, and variation within that area is assumed to be non-physical. There is always some real variation in the atmosphere; however,<?pagebreak page5554?> statistically, for a large sample size these variations are expected to average out. If the area is too small then there will be too few points for an unbiased median. If the area is too large then true atmospheric variability will be significant. A disadvantage of using this method as a “truth” proxy is that it is insensitive to bias on larger scales related to, for example, latitude and surface albedo <xref ref-type="bibr" rid="bib1.bibx58" id="paren.88"><named-content content-type="pre">e.g., </named-content><named-content content-type="post">for OCO-2 and <inline-formula><mml:math id="M164" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></named-content></xref>.</p>
      <p id="d1e3976">We use small regions that are approximately <inline-formula><mml:math id="M165" display="inline"><mml:mrow><mml:mn mathvariant="normal">89</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow><mml:mo>×</mml:mo><mml:mn mathvariant="normal">133</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M166" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.8</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">1.2</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>, latitude <inline-formula><mml:math id="M167" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> longitude, at the Equator). Region size is a trade-off between having sufficient points per region and keeping regions small enough that real variations in <inline-formula><mml:math id="M168" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are small. The effects of different region sizes are described in Sect. S3. To calculate anomalies, we subtract the median from all the points within that region. If the median point does not have at least a degree of freedom (DOF) for the signal then the entire region is discarded. We also require at least 10 points in each region, which retains about 50 % of the SRA bins.</p>
</sec>
<sec id="Ch1.S3.SS3">
  <label>3.3</label><title>Quality control filters</title>
      <?pagebreak page5555?><p id="d1e4045">Using the SRA “truth” proxy, we can look for correlations of differences to the local median (i.e., anomalies) with various parameters that are or may be related to the retrieval. Table <xref ref-type="table" rid="Ch1.T3"/> lists parameters we consider for filtering and bias corrections. We make plots similar to those by <xref ref-type="bibr" rid="bib1.bibx86" id="text.89"/> and <xref ref-type="bibr" rid="bib1.bibx58" id="text.90"/> (though their studies were of <inline-formula><mml:math id="M169" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>) of anomalies versus one of the various parameters to aid in determining filter cutoffs (e.g., Fig. <xref ref-type="fig" rid="Ch1.F3"/>). Such plots may reveal empirical relationships with features. Similar plots with additional parameters, including some we decided were inappropriate to use as filters, are available in the Supplement (Sect. S4). Several features can be examined in these plots to decide on where to set the filter limits, including the underlying histograms, systematic biases from zero in the mean including spikes, the spread among pixels – which indicates pixel-to-pixel bias, and the root-mean square (RMS) from the SRA – which includes systematic and random deviations from the truth proxy. We define filters based usually on one of the following criteria: (1) absolute mean bias is greater than 2 ppb, (2) the RMS is greater than 6 ppb, or (3) spread of pixel-to-pixel bias is greater than 5 ppb. These criteria are not strict, and we change thresholds if too few data are in a bin (due to possible sampling bias), if too many data are removed, or if the overall trend in the mean seems like it could be corrected by a bias correction.</p>
      <p id="d1e4073">Several features are apparent in the SRA diagrams (Figs. <xref ref-type="fig" rid="Ch1.F3"/> and S4–S9) that indicate that data may be less reliable. For example, there is a step change in the bias for soundings over land going from day to night. The RMS is much smaller over snow or ice free scenes (flag of 1). We also note large anomalies for low channel 5A SNR which, in agreement with the L3 product filters, suggest it to be a good parameter to filter on. However, the bias is small for low channel 6A SNR soundings; so unlike the L3 product, we do not use it as a filter criterion. We also find that the sum of the retrieval anomaly diagnostics is a better indicator for suspicious data over land than over water. These particular tests also do not support excluding all pixel-3 soundings, though on average it does have a lower and more variable DOF <xref ref-type="bibr" rid="bib1.bibx10" id="paren.91"/>. Maps of where data are filtered are available in Figs. S10 and S11. Using these filters reduces the number of daytime soundings to <inline-formula><mml:math id="M170" display="inline"><mml:mrow><mml:mn mathvariant="normal">3.50</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">8</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> (of <inline-formula><mml:math id="M171" display="inline"><mml:mrow><mml:mn mathvariant="normal">5.40</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">8</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>) and reduces the RMS from 3.84 to 2.55 ppb. By comparison, when we apply the L3 filters it reduces data to <inline-formula><mml:math id="M172" display="inline"><mml:mrow><mml:mn mathvariant="normal">3.27</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">8</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> daytime soundings and an RMS of 3.02 ppb.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T3" specific-use="star"><?xmltex \currentcnt{3}?><label>Table 3</label><caption><p id="d1e4129">Parameters in or related to MOPITT retrievals that we considered for filtering and bias correction.
Data are excluded if any of the criteria below are met.
Mixed surface-type soundings are also excluded.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.94}[.94]?><oasis:tgroup cols="5">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="center"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Field name</oasis:entry>
         <oasis:entry colname="col2">Source<inline-formula><mml:math id="M175" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">Limits – land</oasis:entry>
         <oasis:entry colname="col4">Limits – water</oasis:entry>
         <oasis:entry colname="col5">Description</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"><inline-formula><mml:math id="M176" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">χ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">I</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">Goodness-of-fit indicator</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Digital elevation model</oasis:entry>
         <oasis:entry colname="col2">I</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">Surface height (m a.s.l).</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Diff. surf. emissivity (<inline-formula><mml:math id="M177" display="inline"><mml:mi>E</mml:mi></mml:math></inline-formula>)<inline-formula><mml:math id="M178" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">D</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M179" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.05</mml:mn></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M180" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0.05</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M181" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.75</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M182" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi>E</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:msub><mml:mi>E</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M183" display="inline"><mml:mi>E</mml:mi></mml:math></inline-formula> is in state vector</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">DOF</oasis:entry>
         <oasis:entry colname="col2">I</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M184" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">1.05</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M185" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">1.00</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">tr(<inline-formula><mml:math id="M186" display="inline"><mml:mi mathvariant="bold">A</mml:mi></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Diff. surf. temperature (<inline-formula><mml:math id="M187" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula>)<inline-formula><mml:math id="M188" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">D</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M189" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M190" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M191" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula> is in state vector</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Error surface <inline-formula><mml:math id="M192" display="inline"><mml:mi>E</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">I</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M193" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0.055</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">Error on <inline-formula><mml:math id="M194" display="inline"><mml:mover accent="true"><mml:mi>E</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Total error <inline-formula><mml:math id="M195" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">R</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">Unused as a filter, used to weight data instead</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Information content</oasis:entry>
         <oasis:entry colname="col2">D</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M196" display="inline"><mml:mrow><mml:mi>H</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:msub><mml:mi>log⁡</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mfenced open="|" close="|"><mml:mtable class="matrix" columnalign="center" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi mathvariant="bold">I</mml:mi><mml:mi>n</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mi mathvariant="bold">A</mml:mi></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced></mml:mrow></mml:math></inline-formula>, unused, too similar to DOF</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">MODIS IR temperature threshold</oasis:entry>
         <oasis:entry colname="col2">I</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">MODIS cloud diagnostic 8</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">MODIS frac. cloudy</oasis:entry>
         <oasis:entry colname="col2">I</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">MODIS cloud diagnostic 2</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">MODIS snow and ice</oasis:entry>
         <oasis:entry colname="col2">I</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M197" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.999</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M198" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.999</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">MODIS cloud diagnostic 5 (see also Sect. <xref ref-type="sec" rid="Ch1.S3.SS1"/>)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Meas. error <inline-formula><mml:math id="M199" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">R</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">Unused, see Total error <inline-formula><mml:math id="M200" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Mean averaging kernel</oasis:entry>
         <oasis:entry colname="col2">D</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M201" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.75</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M202" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.50</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M203" display="inline"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∑</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">u</mml:mi><mml:mi mathvariant="normal">T</mml:mi></mml:msup><mml:mi mathvariant="bold">A</mml:mi><mml:mi mathvariant="bold-italic">u</mml:mi></mml:mrow><mml:mrow><mml:msub><mml:mi>n</mml:mi><mml:mi mathvariant="normal">lvls</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:math></inline-formula>, sum of all elements in <inline-formula><mml:math id="M204" display="inline"><mml:mi mathvariant="bold">A</mml:mi></mml:math></inline-formula> divided by number of</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">profile levels (<inline-formula><mml:math id="M205" display="inline"><mml:mi mathvariant="bold-italic">u</mml:mi></mml:math></inline-formula> is vector of ones)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">AOD 500 nm</oasis:entry>
         <oasis:entry colname="col2">E</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">Average of colocated MODIS pixels (within <inline-formula><mml:math id="M206" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.1</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Max. diff. between adj. levels</oasis:entry>
         <oasis:entry colname="col2">D</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M207" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">300</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M208" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">300</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">Indicator for possibly oscillating profiles</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Number of iterations</oasis:entry>
         <oasis:entry colname="col2">I</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">Until convergence, 1–20</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Solar airmass</oasis:entry>
         <oasis:entry colname="col2">D</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M209" display="inline"><mml:mrow><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:mi>cos⁡</mml:mi><mml:mfenced close=")" open="("><mml:mtext>SZA</mml:mtext></mml:mfenced></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:mi>cos⁡</mml:mi><mml:mfenced open="(" close=")"><mml:mtext>satellite ZA</mml:mtext></mml:mfenced></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Smoothing error <inline-formula><mml:math id="M210" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">R</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">Unused, see Total error <inline-formula><mml:math id="M211" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">SNR 5A (TIR)</oasis:entry>
         <oasis:entry colname="col2">R</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M212" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">500</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M213" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">900</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">L1 radiance divided by error. 1000 is a threshold for L3</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">TIR and TIR–NIR</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">SNR 6A (NIR)</oasis:entry>
         <oasis:entry colname="col2">R</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">See SNR 5A. 400 is a threshold for L3 NIR and TIR–NIR</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">SNR 7A (TIR)</oasis:entry>
         <oasis:entry colname="col2">R</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">See SNR 5A</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Sum retr. anom. diagnostic</oasis:entry>
         <oasis:entry colname="col2">D</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M214" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">Sum of five flags, user's guide suggests</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">caution or exclusion if <inline-formula><mml:math id="M215" display="inline"><mml:mrow><mml:mo>≥</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Solar zenith angle (SZA)</oasis:entry>
         <oasis:entry colname="col2">I</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M216" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">80</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M217" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">80</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M218" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">80</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> is considered nighttime in the retrieval algorithm</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">tr total retr. cov. matrix</oasis:entry>
         <oasis:entry colname="col2">D</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M219" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0.0170</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M220" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0.0168</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M221" display="inline"><mml:mrow><mml:mtext>tr</mml:mtext><mml:mfenced close=")" open="("><mml:mover accent="true"><mml:mi>S</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover></mml:mfenced></mml:mrow></mml:math></inline-formula>, unitless due to log scale, related to overall uncert.</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">of retrieval combination of meas. and smooth matrices</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">tr meas. err. retr. cov. matrix</oasis:entry>
         <oasis:entry colname="col2">D</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M222" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0.0055</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M223" display="inline"><mml:mrow><mml:mtext>tr</mml:mtext><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>S</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mi mathvariant="normal">merr</mml:mi></mml:msub></mml:mrow></mml:mfenced></mml:mrow></mml:math></inline-formula> from uncert. in a priori values and weighting</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">tr smooth err. retr. cov. matrix</oasis:entry>
         <oasis:entry colname="col2">D</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M224" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.0114</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M225" display="inline"><mml:mrow><mml:mtext>tr</mml:mtext><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>S</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mi mathvariant="normal">smth</mml:mi></mml:msub></mml:mrow></mml:mfenced></mml:mrow></mml:math></inline-formula> from uncert. in measured radiances</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table><?xmltex \begin{scaleboxenv}{.95}[.95]?><table-wrap-foot><p id="d1e4132"><?xmltex \hack{\vspace*{2mm}}?><inline-formula><mml:math id="M173" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula> Source: I is included in L2 files, R is ratio within L2 files,
D is other derivation from L2 files, and E is external.
<inline-formula><mml:math id="M174" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula> Difference from the a priori value. AOD is aerosol optical depth. tr is matrix trace.</p></table-wrap-foot><?xmltex \end{scaleboxenv}?></table-wrap>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3"><?xmltex \currentcnt{3}?><label>Figure 3</label><caption><p id="d1e5241">Example diagram showing the small-region approximation (SRA) bias as a function of solar zenith angle for water. The black points show the overall mean (mn) bias (minimum 2000 points), the magenta points show the RMS, and the other points show the mean bias for the individual pixels (minimum 300 points). The lighter histogram is of all the data. The darker histogram is data remaining after the SZA and snow or ice filters. Figures like this are used to make filters for and check for bias in MOPITT L2 data. The red line is the filter cutoff at 80<inline-formula><mml:math id="M226" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>. The equivalent diagram for land, along with diagrams for other features, is in Sect. S4.</p></caption>
          <?xmltex \igopts{width=184.942913pt}?><graphic xlink:href="https://amt.copernicus.org/articles/12/5547/2019/amt-12-5547-2019-f03.png"/>

        </fig>

</sec>
<sec id="Ch1.S3.SS4">
  <label>3.4</label><title>Bias correction</title>
      <p id="d1e5267">We observe trends in the mean bias with various parameters (e.g., Figs. <xref ref-type="fig" rid="Ch1.F3"/> and  S4–S9). To reduce the likelihood of overfitting, <xref ref-type="bibr" rid="bib1.bibx58" id="text.92"/> used linear fits as bias corrections only if they removed at least 5 % of the variance for <inline-formula><mml:math id="M227" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> from OCO-2. For <inline-formula><mml:math id="M228" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> from MOPITT, the ratio between the scatter (indicated by RMS) and bias is larger than for <inline-formula><mml:math id="M229" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> from OCO-2; however, over our period of analysis there are about 400 times more data over water and about 100 times more over land. Fitting concerns here primarily relate to how representative the SRA is as a truth proxy and how much the biases would already be accounted for by adjusting individual soundings using averaging kernels.</p>
      <p id="d1e5316"><?xmltex \hack{\newpage}?>Even with a criterion of only a 3 % reduction in the overall RMS, the only parameter to meet this is the maximum difference between adjacent levels over land (see Fig. S5j). This feature is larger for strong gradients between levels, which can appear when there are strong surface fluxes or when the retrieval is unstable and oscillates. This instability may be caused by bias related to, for example, spectroscopic errors. Following <xref ref-type="bibr" rid="bib1.bibx58" id="text.93"/> we make piecewise linear fits to the overall mean over two regimes, split at 100 ppb for a bias correction. The Multivariate Adaptive Regression Splines (MARS) algorithm could also be used to make a piecewise linear fit over a multidimensional dataset. However, it is more likely to overfit the data. When we applied it to the top three most variable fields the RMS for land soundings was not significantly reduced compared with our piecewise fit, so we did not use those results.</p>
      <p id="d1e5323">In addition to the single “feature” bias correction above, we apply a pixel-to-pixel bias correction after the filtering, described in Sect. <xref ref-type="sec" rid="Ch1.S3.SS3"/>. We perform a second SRA on the filtered data without a pixel bias correction. SRA data are binned separately for each pixel and land or water surface type and averaged over 10 d. On 28 July 2009 one of the coolers on MOPITT malfunctioned, which caused a 2-month instrument shutdown. We separate the period before and after this event and make 16 different linear fits of the bias relative to the all-pixel mean with time (2 for land and water, 4 for pixels, and 2 for time), following the method of <xref ref-type="bibr" rid="bib1.bibx91" id="text.94"/>. These linear fits are used to define the pixel-to-pixel bias.</p><?xmltex \hack{\newpage}?>
</sec>
</sec>
<?pagebreak page5556?><sec id="Ch1.S4">
  <label>4</label><title>Comparisons with TCCON</title>
<sec id="Ch1.S4.SS1">
  <label>4.1</label><title>Coincidence criteria</title>
      <?pagebreak page5557?><p id="d1e5348">Various coincidence criteria have been used to match MOPITT soundings with other datasets, such as aircraft measurements, other satellites, or ground-based sensors. For example, <xref ref-type="bibr" rid="bib1.bibx9 bib1.bibx12" id="text.95"/> used a colocation radius of 50 km for aircraft profiles primarily over North America and a colocation radius of 200 km for aircraft profiles primarily over remote ocean. Over the Amazon, <xref ref-type="bibr" rid="bib1.bibx11" id="text.96"/> also used a colocation radius of 200 km and a colocation time of 24 h. <xref ref-type="bibr" rid="bib1.bibx76" id="text.97"/> used criteria of <inline-formula><mml:math id="M230" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.15</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> latitude and <inline-formula><mml:math id="M231" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.23</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> longitude, corresponding to <inline-formula><mml:math id="M232" display="inline"><mml:mrow><mml:mn mathvariant="normal">33</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow><mml:mo>×</mml:mo><mml:mn mathvariant="normal">33</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> over Paris. <xref ref-type="bibr" rid="bib1.bibx3" id="text.98"/> used a 1<inline-formula><mml:math id="M233" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> radius and ground-based measurements within the same day. Criteria could also include fields such as the temperature of the free troposphere <xref ref-type="bibr" rid="bib1.bibx86 bib1.bibx55" id="paren.99"><named-content content-type="pre">e.g., around 700 hPa,</named-content></xref>. <xref ref-type="bibr" rid="bib1.bibx67" id="text.100"/> used a sampling cone based on the solar azimuth angle at the time of measurement for comparing TCCON with TROPOMI. This is likely unimportant for MOPITT given the larger footprint size (<inline-formula><mml:math id="M234" display="inline"><mml:mrow><mml:mn mathvariant="normal">22</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow><mml:mo>×</mml:mo><mml:mn mathvariant="normal">22</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> versus <inline-formula><mml:math id="M235" display="inline"><mml:mrow><mml:mn mathvariant="normal">7</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow><mml:mo>×</mml:mo><mml:mn mathvariant="normal">7</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>). For example, at a 60<inline-formula><mml:math id="M236" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> SZA for a MOPITT pixel centered on a TCCON site at sea level, the TCCON ray would leave the MOPITT pixel at around 11 km or above 250 hPa. For a comparison of SCIAMACHY with NDACC–TCCON, <xref ref-type="bibr" rid="bib1.bibx30" id="text.101"/> found it to be necessary to deweight observations that were further away in time and space from points of comparison. This is likely much less of an issue for this study due to differences in retrieval errors and coincidence scales. For MOPITT the median retrieval error is about 3.5 ppb versus 24.8 ppb for SCIAMACHY. For SCIAMACHY temporal averaging was on the order of a month compared to this study, where we only use TCCON observations within <inline-formula><mml:math id="M237" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">30</mml:mn></mml:mrow></mml:math></inline-formula> min. We apply spatial averaging to the MOPITT data typically over areas of <inline-formula><mml:math id="M238" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> (with exceptions noted below). Spatial weighting is not as much of a concern here as for <xref ref-type="bibr" rid="bib1.bibx30" id="text.102"/> with SCIAMACHY because they used coincidence criteria of 500–2000 km radii, which are significantly larger in terms of area (about 8–100 times). However, despite using smaller areas, heterogeneities in <inline-formula><mml:math id="M239" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> sources that MOPITT averages over may occasionally introduce bias for real reasons <xref ref-type="bibr" rid="bib1.bibx47" id="paren.103"><named-content content-type="pre">e.g.,</named-content></xref>.</p>
      <p id="d1e5529">We make exceptions to the <inline-formula><mml:math id="M240" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> latitude <inline-formula><mml:math id="M241" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> longitude spatial coincidence criteria for several sites. For sites poleward of 60<inline-formula><mml:math id="M242" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> (eu, sp, and so) we expand the area to <inline-formula><mml:math id="M243" display="inline"><mml:mrow><mml:mn mathvariant="normal">4</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">8</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> because the atmosphere is expected to be well mixed and retrievals are more sparse. For sites in the Los Angeles Basin (ci, jc, and jf), we limit the area to 33.4–34.3<inline-formula><mml:math id="M244" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, 116.7–118.8<inline-formula><mml:math id="M245" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W, because we expect <inline-formula><mml:math id="M246" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> within the basin to be much larger than the surrounding area due to urban emissions. We set the minimum latitude to 34.5<inline-formula><mml:math id="M247" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N for the AFRC site to avoid the polluted Los Angeles Basin. We average soundings over land and water separately.</p>
      <p id="d1e5628">Because of the long (<inline-formula><mml:math id="M248" display="inline"><mml:mrow><mml:mn mathvariant="normal">13</mml:mn><mml:mo>+</mml:mo></mml:mrow></mml:math></inline-formula> year) comparison between MOPITT and TCCON, random representation error is much less important than systematic error. <xref ref-type="bibr" rid="bib1.bibx76" id="text.104"/> and <xref ref-type="bibr" rid="bib1.bibx3" id="text.105"/> noted that systematic biases can arise from comparing total column observations (in molec. cm<inline-formula><mml:math id="M249" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) from MOPITT and NDACC when the surface altitudes differ significantly. This effect will be diminished in column averages (<inline-formula><mml:math id="M250" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) in locations away from strong local surface fluxes; however, different surface altitudes can lead to biases because <inline-formula><mml:math id="M251" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> profiles are not completely uniform. Between two TCCON sites only <inline-formula><mml:math id="M252" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula> km apart in an urban region, <xref ref-type="bibr" rid="bib1.bibx29" id="text.106"/> noted an <inline-formula><mml:math id="M253" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> difference of nearly 1 ppm. They attributed part of this to the different site altitudes. We estimate the ratio between observations at the surface pressure of TCCON versus the surface pressure of MOPITT soundings. The total column-average dry mole fraction is
            <disp-formula id="Ch1.E4" content-type="numbered"><label>4</label><mml:math id="M254" display="block"><mml:mrow><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow><mml:mo>,</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow><mml:mo>=</mml:mo><mml:mo movablelimits="false">∑</mml:mo><mml:msub><mml:mi>h</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
          The vector <inline-formula><mml:math id="M255" display="inline"><mml:mi mathvariant="bold-italic">x</mml:mi></mml:math></inline-formula> here can be either the retrieved profile or the a priori VMR profile. We use the MOPITT profiles because they are likely more representative of the true atmosphere than TCCON a priori profiles and apply Eq. (<xref ref-type="disp-formula" rid="Ch1.E4"/>) to find the retrieved and prior MOPITT <inline-formula><mml:math id="M256" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> at the MOPITT sounding surface pressure. We then recalculate <inline-formula><mml:math id="M257" display="inline"><mml:mi mathvariant="bold">h</mml:mi></mml:math></inline-formula> based on the daily average TCCON site surface pressure. When TCCON altitude is lower, the MOPITT surface level is uniformly extended. For higher-altitude sites, the lowest-altitude MOPITT levels are either unused (<inline-formula><mml:math id="M258" display="inline"><mml:mrow><mml:msub><mml:mi>h</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>) or deweighted. We then calculate <inline-formula><mml:math id="M259" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> based on TCCON surface pressure. Figure <xref ref-type="fig" rid="Ch1.F4"/> shows the ratios between the MOPITT retrieved <inline-formula><mml:math id="M260" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> using the TCCON surface pressure compared to the MOPITT sounding surface pressure for <inline-formula><mml:math id="M261" display="inline"><mml:mrow><mml:mn mathvariant="normal">10</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">10</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> areas. Larger areas are used to get a larger variety in surface pressures. We see that for the high-altitude Zugspitze site, this scaling is particularly large (around 15 %). Over these areas the overall scaling for all sites is <inline-formula><mml:math id="M262" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.996</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.023</mml:mn></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M263" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula>). A scaling factor less than unity is usually due to larger <inline-formula><mml:math id="M264" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> mixing ratios near the surface than the rest of the column and lower TCCON site pressure <xref ref-type="bibr" rid="bib1.bibx29" id="paren.107"/>. In this intercomparison, we implicitly account for differences in surface pressure using the <inline-formula><mml:math id="M265" display="inline"><mml:mi mathvariant="bold-italic">h</mml:mi></mml:math></inline-formula> vector. This can make a difference for individual sites by as much as <inline-formula><mml:math id="M266" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">10.5</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">4.1</mml:mn></mml:mrow></mml:math></inline-formula> ppb (1<inline-formula><mml:math id="M267" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>) (for Zugspitze). However, we have found in practice that accounting for differences in surface pressure makes little difference here on the overall comparison (compare Fig. S12c and f). In aggregate the difference is only <inline-formula><mml:math id="M268" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.2</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.5</mml:mn></mml:mrow></mml:math></inline-formula> ppb (1<inline-formula><mml:math id="M269" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4"><?xmltex \currentcnt{4}?><label>Figure 4</label><caption><p id="d1e5915">Scaling factors for MOPITT retrieved profiles if the surface were at the surface of the TCCON site (listed in m a.s.l. in parenthesis). Ordered by increasing site altitude. Soundings within <inline-formula><mml:math id="M270" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> latitude and <inline-formula><mml:math id="M271" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> longitude of TCCON site are used. The center 99 % of data are shown. Blue filled sections indicate data density, similar to a violin plot but using histograms rather than a kernel density estimation due to sufficient data. Black boxes indicate the central 50 % of data, and medians are orange.</p></caption>
          <?xmltex \igopts{width=227.622047pt}?><graphic xlink:href="https://amt.copernicus.org/articles/12/5547/2019/amt-12-5547-2019-f04.png"/>

        </fig>

</sec>
<sec id="Ch1.S4.SS2">
  <label>4.2</label><title>Overall global scaling</title>
      <p id="d1e5960">MOPITT and TCCON use different a priori VMR profiles and have different averaging kernels (AKs; Sect. <xref ref-type="sec" rid="Ch1.S4.SS4"/>), and these differences in sensitivity need to be taken into account when comparing retrievals from the different instruments. Here we account for differences in AKs and a priori profiles following the methods of <xref ref-type="bibr" rid="bib1.bibx86" id="text.108"/>, which are formally described as method II in Sect. S6.1. Retrievals are also on different vertical grids, and regridding is described in Appendix <xref ref-type="sec" rid="App1.Ch1.S3"/>. Figure <xref ref-type="fig" rid="Ch1.F5"/> shows the comparison for all sites. We find that MOPITT observations are higher than TCCON by about 6.4 %. This is similar to the 5.1 % positive bias between MOPITT V6J and NDACC total column observations <xref ref-type="bibr" rid="bib1.bibx3" id="paren.109"/>.</p>
      <p id="d1e5975">We perform a variety of sensitivity tests on the overall global comparison. There are different approaches to account for different a priori VMR profiles and AKs such as the choice of comparison ensemble (Sect. S6). Figure S12 shows the comparison for a variety of tests when AKs are applied<?pagebreak page5558?> differently or not at all. Generally all comparisons show MOPITT to be about 6 %–9 % higher than TCCON, with some exceptions. For method III, where AKs are applied in a manner opposite to method II, the bias is as high as 15 % but is closer to <inline-formula><mml:math id="M272" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula> % or less. Figure S13 is a series of bar charts of how the different methods compare for each site. We also examine how the scaling changes for different colocation criteria in Figs. S12d and e by halving and doubling the coincidence areas. We find that MOPITT is biased higher than TCCON in these tests by 5 %–7.4 %. Doubling the area decreases <inline-formula><mml:math id="M273" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> for the global comparison.</p>
      <p id="d1e5999">Next we test sensitivity to pressure scaling. Our vertical regridding (Appendix <xref ref-type="sec" rid="App1.Ch1.S3"/>) accounts for differences in surface pressure, so we use a basic comparison without AK corrections (method 0) for this test. Between these two, the overall offset is not significantly different (9 %–10 %).</p>
      <p id="d1e6004">Finally we test whether filtering and bias corrections affect the comparison (Fig. S12g–i). The pixel and feature bias correction have little effect on the overall global comparison (<inline-formula><mml:math id="M274" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">5.8</mml:mn></mml:mrow></mml:math></inline-formula> %–6.8 %). Without filtering, the scatter in the comparison increases, leading to a smaller <inline-formula><mml:math id="M275" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>. Due to a large intercept, the percent difference spans about 3 %–8 %. Figure S12g shows the comparison for a derived TCCON product without empirical corrections for airmass and without correction to the WMO scale <xref ref-type="bibr" rid="bib1.bibx87" id="paren.110"/>. In this comparison the TCCON data do not have the standard scaling to aircraft. Due to uncertainties in the TCCON WMO scaling (Sect. S2), some comparisons are made without it. Here the bias between the datasets is significantly different and is less than 0.5 %. When MOPITT V7J data were compared directly with NOAA flask measurements from aircraft, <xref ref-type="bibr" rid="bib1.bibx12" id="text.111"/> found a positive bias of less than about 1 %.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5"><?xmltex \currentcnt{5}?><label>Figure 5</label><caption><p id="d1e6037">One-to-one plot comparing MOPITT and TCCON, following method II <xref ref-type="bibr" rid="bib1.bibx86" id="paren.112"><named-content content-type="pre">similar to</named-content><named-content content-type="post">Sect. S6</named-content></xref>. MOPITT data were adjusted to the TCCON a priori profile (<inline-formula><mml:math id="M276" display="inline"><mml:mrow><mml:msubsup><mml:mover accent="true"><mml:mi>c</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mi mathvariant="normal">M</mml:mi><mml:mo>′</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>), and MOPITT averaging kernels were applied to TCCON data (<inline-formula><mml:math id="M277" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>c</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mrow><mml:mi mathvariant="normal">M</mml:mi><mml:mo>←</mml:mo><mml:mi mathvariant="normal">T</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>).  Error bars represent standard deviations of the weighted averages. Triangles represent soundings over water, and other shapes are over land. Text is number of points or days <inline-formula><mml:math id="M278" display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula>; coefficient of determination for ordinary least-squares regression <inline-formula><mml:math id="M279" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>; and bias (in %) at 50, 75, 100, and 150 ppb using the shown fit and equation for the shown fit using the methods of <xref ref-type="bibr" rid="bib1.bibx91" id="text.113"/>.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://amt.copernicus.org/articles/12/5547/2019/amt-12-5547-2019-f05.png"/>

        </fig>

      <?pagebreak page5559?><p id="d1e6110">Figure <xref ref-type="fig" rid="Ch1.F6"/> shows boxplots of the MOPITT to TCCON differences (using method II) for each site for land-only and water-only soundings. We do not note an overall bias between land and water. For all sites the TCCON<inline-formula><mml:math id="M280" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>MOPITT bias is positive and usually on the order of about 3–10 ppb with a few exceptions. For example, MOPITT observations compared to the AFRC (df) TCCON are particularly high (<inline-formula><mml:math id="M281" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula>14 ppb). This could be related to the high albedo or high surface temperatures of this desert site.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6"><?xmltex \currentcnt{6}?><label>Figure 6</label><caption><p id="d1e6131">Boxplots of the MOPITT–TCCON percent difference at the TCCON sites (using method II), ordered by latitude (degrees north in parenthesis). Blue boxes are MOPITT soundings over water, and brown boxes are those over land. Whiskers represent the inner 95 % of data. Notches are 95 % confidence intervals of the median. Box heights represent the relative number of observations. The solid horizontal line is the Equator, dashed lines are <inline-formula><mml:math id="M282" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">45</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>, and the dotted line is 60<inline-formula><mml:math id="M283" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://amt.copernicus.org/articles/12/5547/2019/amt-12-5547-2019-f06.png"/>

        </fig>

</sec>
<sec id="Ch1.S4.SS3">
  <label>4.3</label><title>Systematic biases</title>
      <p id="d1e6171">A seasonal variation in bias may be indicative of differences in sensitivities between the instruments to some feature, such as airmass or water content, that varies seasonally. Figure <xref ref-type="fig" rid="Ch1.F7"/> shows the time series of the difference averaged in 1-month 5<inline-formula><mml:math id="M284" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> latitudinal bands. Though there is significant scatter among individual comparisons, we find a long-term trend of <inline-formula><mml:math id="M285" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.06</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.06</mml:mn></mml:mrow></mml:math></inline-formula> % yr<inline-formula><mml:math id="M286" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the MOPITT–TCCON difference using the Theil–Sen estimator. <xref ref-type="bibr" rid="bib1.bibx12" id="text.114"/> reported a bias drift of <inline-formula><mml:math id="M287" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.04</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.10</mml:mn></mml:mrow></mml:math></inline-formula> % yr<inline-formula><mml:math id="M288" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for V7J, though bias drifts for individual layers were larger. Including a correction trend to the L1 radiances significantly reduced the bias drift for the layers <xref ref-type="bibr" rid="bib1.bibx13" id="paren.115"/>. Seasonalities of the difference for each site are in Fig. S14. There does not appear to be a persistent seasonal trend for all sites, though there is some seasonal variability for individual sites. For Lamont and AFRC the bias is larger in July–October, while for Białystok the bias is larger in April–June. At Ascension the bias is largest in January–February, while for Réunion it is largest in September–November. We do not make a seasonal bias correction.</p>
      <p id="d1e6244">There appears to be some latitudinally dependent bias, with a larger bias in the Northern Hemisphere. Part of this could be related to stratospheric <inline-formula><mml:math id="M289" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> (Sect. S1). <xref ref-type="bibr" rid="bib1.bibx12" id="text.116"/> also showed some latitudinal variation in MOPITT retrievals compared with aircraft. They suggested that part of the variability could arise from interfering species such as <inline-formula><mml:math id="M290" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>, which has spectral lines that overlap with the TIR channels. Before V7 a constant value of <inline-formula><mml:math id="M291" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> was assumed, which was determined to cause biases on the order of a few parts per billion <xref ref-type="bibr" rid="bib1.bibx12" id="paren.117"/>. In V7 a global average is used based on a linear fit to monthly in situ observations. Figure S14 shows the bias as a function of column <inline-formula><mml:math id="M292" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> measured by the TCCON. There is a slope of <inline-formula><mml:math id="M293" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.40</mml:mn><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mrow><mml:mi mathvariant="normal">CO</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:msub></mml:mrow><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></inline-formula>, though the overall correlation is small (<inline-formula><mml:math id="M294" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.08</mml:mn></mml:mrow></mml:math></inline-formula>). There also appears to be a small dependence on column <inline-formula><mml:math id="M295" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>, which was likely reduced in V8 <xref ref-type="bibr" rid="bib1.bibx13" id="paren.118"/>. We do not make bias corrections for any of these systematic features.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7"><?xmltex \currentcnt{7}?><label>Figure 7</label><caption><p id="d1e6371">Rotated Hovmöller diagram of the mean percent differences between binned MOPITT and TCCON data using method II (Sect. S6.1). Latitude bins are 5<inline-formula><mml:math id="M296" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> zonal bands, and temporal bins are monthly; <bold>(a)</bold> uses standard TCCON data, and <bold>(b)</bold> is without the TCCON scaling to aircraft (WMO scale – see Sect. S2).</p></caption>
          <?xmltex \igopts{width=213.395669pt}?><graphic xlink:href="https://amt.copernicus.org/articles/12/5547/2019/amt-12-5547-2019-f07.png"/>

        </fig>

</sec>
<sec id="Ch1.S4.SS4">
  <label>4.4</label><title>Averaging kernels, covariance matrices, and information content</title>
      <p id="d1e6403">According to <xref ref-type="bibr" rid="bib1.bibx64" id="text.119"><named-content content-type="post">Sect. 2 therein</named-content></xref>, an intercomparison of two observing systems should also include a comparison of (1) averaging kernels, (2) retrieval noise covariance, (3) degrees of freedom, and (4) the Shannon information content. In conjunction with the comparison of averaging kernels, we think that it is also helpful to compare a priori profiles, which is done in Appendix <xref ref-type="sec" rid="App1.Ch1.S4"/>. Because the MOPITT retrievals are of logarithmic profiles and the TCCON uses a linear scaling retrieval, some aspects of the comparison are inherently different.</p>

      <?xmltex \floatpos{p}?><fig id="Ch1.F8" specific-use="star"><?xmltex \currentcnt{8}?><label>Figure 8</label><caption><p id="d1e6415">Examples of AKs  from TCCON and MOPITT – subplots are not always related. MOPITT daytime AKs <bold>(a–d)</bold> are shown as center-point values along the <inline-formula><mml:math id="M297" display="inline"><mml:mi>y</mml:mi></mml:math></inline-formula> axis for clarity, though MOPITT retrievals are layer averages. Unitless MOPITT column AKs are generated using the methods of Appendix <xref ref-type="sec" rid="App1.Ch1.S2"/>. <bold>(a)</bold> MOPITT column AKs around Lamont for 2012–2013 separated by pixel. Filled areas are the central 80 %, and solid center lines are the medians per level. Black lines are select examples from single soundings that show wide variability from sounding to sounding. The thicker example corresponds to the full AK in <bold>(b)</bold>. <bold>(b)</bold> Example MOPITT full AK from 16 October 2012. Dots highlight the <inline-formula><mml:math id="M298" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula>th level shown in the legend. <bold>(c)</bold> Median MOPITT column AK per level by month for Pasadena. <bold>(d)</bold> Median MOPITT column AK per level by season for land and water soundings for Lauder. <bold>(e)</bold> Standard TCCON GGG2014 AKs, which are assumed to be a function of only SZA and pressure. <bold>(f)</bold> Differences from AKs explicitly calculated at the ETL site on specific days compared to the standard AKs. For 18 June 2017, the mean of the ETL <inline-formula><mml:math id="M299" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is <inline-formula><mml:math id="M300" display="inline"><mml:mrow><mml:mn mathvariant="normal">74.0</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn></mml:mrow></mml:math></inline-formula> ppb (1<inline-formula><mml:math id="M301" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>). For 9 September 2017, the mean of the ETL <inline-formula><mml:math id="M302" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is <inline-formula><mml:math id="M303" display="inline"><mml:mrow><mml:mn mathvariant="normal">169</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">32</mml:mn></mml:mrow></mml:math></inline-formula> ppb (1<inline-formula><mml:math id="M304" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>), with a range of 95–225 ppb.</p></caption>
          <?xmltex \igopts{width=284.527559pt}?><graphic xlink:href="https://amt.copernicus.org/articles/12/5547/2019/amt-12-5547-2019-f08.png"/>

        </fig>

      <?pagebreak page5560?><p id="d1e6526">Example AKs for MOPITT and TCCON are shown in Fig. <xref ref-type="fig" rid="Ch1.F8"/>. Because the MOPITT retrieval is on a log scale, we make an assumption that the a priori VMRs represent the true profile to obtain unitless AKs (Appendix <xref ref-type="sec" rid="App1.Ch1.S2"/>). We find that the TCCON AKs are more sensitive than MOPITT. Shaded regions in Fig. <xref ref-type="fig" rid="Ch1.F8"/>a show a wide variability in MOPITT column AKs. In addition, the typical state significantly affects the MOPITT AKs (e.g., compare Pasadena and Lauder). TCCON <inline-formula><mml:math id="M305" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> column AKs are most sensitive to the stratosphere and are assumed to be consistent at all sites. We make a sensitivity test where the AKs were explicitly calculated in GGG2014 for days with a wide range of <inline-formula><mml:math id="M306" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> at the East Trout Lake site. In general the difference from the standard AKs is small, on the order of 5 % at most.</p>
      <p id="d1e6555">A priori profiles and MOPITT retrieved profiles along with their differences for select sites are shown in Appendix <xref ref-type="sec" rid="App1.Ch1.S4"/>. We compare MOPITT and TCCON a priori profiles. In general, MOPITT a priori profiles are influenced more by localized emissions, as they are based on 1<inline-formula><mml:math id="M307" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> simulated monthly climatologies from the CAM-chem model <xref ref-type="bibr" rid="bib1.bibx9" id="paren.120"/>. This can be seen especially at Pasadena and to a lesser extent at Lamont and Tsukuba. Ascension Island shows a special case where enhanced <inline-formula><mml:math id="M308" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> in the lower free troposphere is seen coming from biomass burning and rainforest VOC emissions in Africa. At sites far removed from local emissions (e.g., Ny-Ålesund and Lauder) the MOPITT and TCCON a priori profiles are in better agreement with each other <xref ref-type="bibr" rid="bib1.bibx60" id="paren.121"><named-content content-type="pre">see e.g.,</named-content></xref>.</p>
      <p id="d1e6585">We take differences in a priori profiles and averaging kernels into account following method II, described in Sect. S6.1. Corrections are applied to each MOPITT retrieval and to daily averages of TCCON retrievals within coincidence criteria. We find in practice that corrections change the comparison by about 3 %. TCCON data are adjusted by <inline-formula><mml:math id="M309" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.7</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.8</mml:mn></mml:mrow></mml:math></inline-formula> ppb (1<inline-formula><mml:math id="M310" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>), and MOPITT data are adjusted by <inline-formula><mml:math id="M311" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.0</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">3.1</mml:mn></mml:mrow></mml:math></inline-formula> ppb (1<inline-formula><mml:math id="M312" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>).</p>
      <p id="d1e6628">Rather than comparing the retrieval noise covariance, we compare reported errors and measures of precision and accuracy. Histograms of total reported retrieval error for MOPITT are shown in Figs. S4o and S5o. With our prescribed filtering, global mean uncertainty values are <inline-formula><mml:math id="M313" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.60</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.27</mml:mn></mml:mrow></mml:math></inline-formula> ppb (1<inline-formula><mml:math id="M314" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>) for smoothing, <inline-formula><mml:math id="M315" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.68</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.40</mml:mn></mml:mrow></mml:math></inline-formula> ppb (1<inline-formula><mml:math id="M316" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>) for measurement, and <inline-formula><mml:math id="M317" display="inline"><mml:mrow><mml:mn mathvariant="normal">3.86</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.63</mml:mn></mml:mrow></mml:math></inline-formula> ppb (1<inline-formula><mml:math id="M318" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>) for the total error. The average of the errors reported in the TCCON files is <inline-formula><mml:math id="M319" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.62</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.50</mml:mn></mml:mrow></mml:math></inline-formula> ppb (1<inline-formula><mml:math id="M320" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>). However, these errors are more a measure of repeatability than the total error or the accuracy. The <inline-formula><mml:math id="M321" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula> uncertainty for TCCON (GGG2009) was reported as 4 ppb <xref ref-type="bibr" rid="bib1.bibx84" id="paren.122"/>, and the uncertainty budget from a range of sensitivity tests is less than 4 % <xref ref-type="bibr" rid="bib1.bibx87" id="paren.123"/>.</p>
      <p id="d1e6724">Histograms of the MOPITT DOF for the signal for water and land are shown in Figs. S4d and S5k. The DOF for the signal (<inline-formula><mml:math id="M322" display="inline"><mml:mrow><mml:msub><mml:mi>d</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) can be determined from
            <disp-formula id="Ch1.E5" content-type="numbered"><label>5</label><mml:math id="M323" display="block"><mml:mrow><mml:msub><mml:mi>d</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mi mathvariant="script">E</mml:mi><mml:mfenced close="}" open="{"><mml:mrow><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mi>T</mml:mi></mml:msup><mml:msubsup><mml:mi mathvariant="bold">S</mml:mi><mml:mi mathvariant="normal">a</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup><mml:mfenced open="(" close=")"><mml:mrow><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub></mml:mrow></mml:mfenced></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where <inline-formula><mml:math id="M324" display="inline"><mml:mi mathvariant="script">E</mml:mi></mml:math></inline-formula> is the expected value operator <xref ref-type="bibr" rid="bib1.bibx63" id="paren.124"><named-content content-type="post">Eq. 2.46 therein</named-content></xref>. However, <inline-formula><mml:math id="M325" display="inline"><mml:mrow><mml:msub><mml:mi>d</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is usually determined from the trace of the averaging-kernel matrix <xref ref-type="bibr" rid="bib1.bibx63" id="paren.125"><named-content content-type="post">Eq. 2.80 therein</named-content></xref>, which is equivalent to Eq. (<xref ref-type="disp-formula" rid="Ch1.E5"/>) for profile retrievals. Because GGG2014 is a scaling retrieval, we treat TCCON measurements as having <inline-formula><mml:math id="M326" display="inline"><mml:mrow><mml:msub><mml:mi>d</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>. With a profile retrieval we would expect <inline-formula><mml:math id="M327" display="inline"><mml:mrow><mml:msub><mml:mi>d</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>, as was the case for <inline-formula><mml:math id="M328" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx5" id="paren.126"/>. The DOF gives an indication of how many independent parameters can be improved compared with the a priori profile. MOPITT DOFs are between 1 and 2, which indicates that total column measurements may be reasonable, but individual layer measurements may not always be accurate.</p>
      <p id="d1e6873">Finally, the information content <inline-formula><mml:math id="M329" display="inline"><mml:mrow><mml:msub><mml:mi>H</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is a measure of how accurate a measurement is to how well a value is known a priori. <xref ref-type="bibr" rid="bib1.bibx63" id="text.127"/> expresses it on a natural log scale (Eqs. 2.73 and 2.80 therein):
            <disp-formula id="Ch1.E6" content-type="numbered"><label>6</label><mml:math id="M330" display="block"><mml:mrow><mml:msub><mml:mi>H</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mi>ln⁡</mml:mi><mml:mfenced close="|" open="|"><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold">S</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:msub><mml:mi mathvariant="bold">S</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mi>ln⁡</mml:mi><mml:mfenced close="|" open="|"><mml:mrow><mml:msub><mml:mi mathvariant="bold">I</mml:mi><mml:mi>n</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mi mathvariant="bold">A</mml:mi></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where <inline-formula><mml:math id="M331" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold">I</mml:mi><mml:mi>n</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the identity matrix. Here we express <inline-formula><mml:math id="M332" display="inline"><mml:mrow><mml:msub><mml:mi>H</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> on a <inline-formula><mml:math id="M333" display="inline"><mml:mrow><mml:msub><mml:mi>log⁡</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> scale instead. Histograms of <inline-formula><mml:math id="M334" display="inline"><mml:mrow><mml:msub><mml:mi>H</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> for MOPITT profile retrievals are shown in Figs. S6a and S8a, and values are on the order of 2.5–5.5 bits over water and 2.5–7 bits over land. If model values of <inline-formula><mml:math id="M335" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are accurate to about 32 ppb, and if the TCCON accuracy is about 4 ppb, then the TCCON <inline-formula><mml:math id="M336" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> information content is about <inline-formula><mml:math id="M337" display="inline"><mml:mrow><mml:msub><mml:mi>log⁡</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">32</mml:mn><mml:mn mathvariant="normal">4</mml:mn></mml:mfrac></mml:mstyle><mml:mo>≈</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:math></inline-formula> bits.</p>
</sec>
</sec>
<?pagebreak page5562?><sec id="Ch1.S5">
  <label>5</label><title>Model assimilations</title>
      <p id="d1e7052">We assimilate MOPITT observations using the GEOS-Chem model to show how filtering and the bias correction affect estimated emissions inferred from inversion analyses. We conducted three experiments in which we assimilated the following datasets: (1) the original MOPITT data, (2) the filtered and bias-corrected data with scaling down by about 6 % to match the standard TCCON data (Fig. <xref ref-type="fig" rid="Ch1.F5"/>; referred to as Assim. 2), and (3) the filtered and bias-corrected data with a scaling of less than 0.5 % to the TCCON-based data not tied to the WMO scale and without the empirical airmass correction (Fig. S12g; referred to as Assim. 3). The assimilation is performed using the GEOS-Chem four-dimensional variational (4D-Var) data assimilation system, employing Version 35J of the adjoint model at a horizontal resolution of <inline-formula><mml:math id="M338" display="inline"><mml:mrow><mml:mn mathvariant="normal">4</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">5</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>. The GEOS-Chem 4D-Var system has been used in previous studies for assimilation of MOPITT data <xref ref-type="bibr" rid="bib1.bibx43 bib1.bibx34 bib1.bibx35 bib1.bibx36" id="paren.128"><named-content content-type="pre">e.g.,</named-content></xref>. We assimilate the MOPITT data to optimize monthly average <inline-formula><mml:math id="M339" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> emissions. We assimilate daytime observations for the periods of October–December 2009 and May–July 2011 to coincide with flights from the HIPPO campaign. The a posteriori <inline-formula><mml:math id="M340" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> fluxes are compared with the a priori fluxes, and the a posteriori <inline-formula><mml:math id="M341" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> concentrations are validated against <inline-formula><mml:math id="M342" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> measurements from the HIPPO 10 s merged data <xref ref-type="bibr" rid="bib1.bibx65" id="paren.129"/>.</p>
      <p id="d1e7118">The assimilation uses the offline <inline-formula><mml:math id="M343" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> simulation in GEOS-Chem with prescribed monthly mean OH fields from TransCom <xref ref-type="bibr" rid="bib1.bibx59" id="paren.130"/> to compute the sink of <inline-formula><mml:math id="M344" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>. The prior anthropogenic <inline-formula><mml:math id="M345" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> emissions are from the EDGAR v4.2 inventory, which are overwritten regionally with the following inventories: the Streets 2006 emissions over China and southeastern Asia
from <xref ref-type="bibr" rid="bib1.bibx92" id="text.131"/>, the annual Canadian anthropogenic emissions from the Criteria Air Contaminants (CAC inventory), the National Emissions Inventory 2005 (NEI2005) from the United States Environmental Protection Agency (EPA), the “co-operative programme for monitoring and evaluation of the long-range transmission of air pollutants in Europe” (EMEP) inventory, and the Big Bend Regional Aerosol and Visibility Observational (BRAVO) inventory in Mexico. The Global Fire Emissions Database, Version 3 (GFED3), provides the biomass emissions. The biofuel emissions are the <xref ref-type="bibr" rid="bib1.bibx90" id="text.132"/> inventory. The initial condition of <inline-formula><mml:math id="M346" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> states is generated by spinning up the GEOS-Chem model from January 2009. The initial <inline-formula><mml:math id="M347" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> concentrations are not optimized in the assimilation. The prior emissions are scaled by a factor of 1.5, and the emission error is purposely set to be 500 % so that the posterior <inline-formula><mml:math id="M348" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> source estimates will  be less influenced by the a priori emissions and more strongly reflect the information from the filtered MOPITT observations.</p>
      <p id="d1e7179">Using HIPPO-2 and HIPPO-4 measurements for comparison, the simulation using only a priori fluxes produces mole fractions that are low by approximately 5 % (Tables <xref ref-type="table" rid="Ch1.T4"/> and <xref ref-type="table" rid="Ch1.T5"/>). On the other hand, the original MOPITT assimilation and the assimilation which is not tied to WMO (Assimilation 3) tend to agree with each other and are biased high relative to HIPPO measurements. Assimilation 2 mole fractions are lower compared to HIPPO than the other assimilations. This suggests that scaling down MOPITT observations to match TCCON is translated to less <inline-formula><mml:math id="M349" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> in the assimilation, as expected. However, the comparison with HIPPO shows mixed results with each simulation depending on which latitudinal bands is considered.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T4" specific-use="star"><?xmltex \currentcnt{4}?><label>Table 4</label><caption><p id="d1e7198">Comparisons of GEOS-Chem-simulated mole fractions assimilating MOPITT
data with HIPPO-2 observations. Uncertainties are <inline-formula><mml:math id="M350" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula>. Units are in parts per billion.
See text for descriptions of the assimilations.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="5">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Latitudinal bands</oasis:entry>
         <oasis:entry colname="col2">Prior VMR</oasis:entry>
         <oasis:entry colname="col3">Orig. MOPITT</oasis:entry>
         <oasis:entry colname="col4">Assim. 2</oasis:entry>
         <oasis:entry colname="col5">Assim. 3</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M351" display="inline"><mml:mrow><mml:mfenced open="[" close="]"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">40</mml:mn><mml:mo>,</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:mfenced></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M352" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4.8</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">14.0</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M353" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.5</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">15.3</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M354" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2.4</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">14.9</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M355" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.1</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">15.2</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M356" display="inline"><mml:mrow><mml:mfenced close="]" open="["><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">20</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:mfenced></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M357" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5.4</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">6.9</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M358" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.0</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">7.3</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M359" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">6.0</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">6.9</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M360" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.3</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">7.3</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M361" display="inline"><mml:mrow><mml:mfenced close="]" open="["><mml:mrow><mml:mn mathvariant="normal">20</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">40</mml:mn></mml:mrow></mml:mfenced></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M362" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5.3</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">22.7</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M363" display="inline"><mml:mrow><mml:mn mathvariant="normal">14.0</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">28.3</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M364" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4.1</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">22.9</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M365" display="inline"><mml:mrow><mml:mn mathvariant="normal">13.2</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">28.1</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M366" display="inline"><mml:mrow><mml:mfenced open="[" close="]"><mml:mrow><mml:mn mathvariant="normal">40</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">60</mml:mn></mml:mrow></mml:mfenced></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M367" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">7.4</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">14.1</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M368" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.9</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">15.7</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M369" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">6.2</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">13.9</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M370" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.5</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">15.6</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M371" display="inline"><mml:mrow><mml:mfenced close="]" open="["><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">90</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">90</mml:mn></mml:mrow></mml:mfenced></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M372" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5.2</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">19.0</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M373" display="inline"><mml:mrow><mml:mn mathvariant="normal">3.3</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">19.9</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M374" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4.2</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">18.9</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M375" display="inline"><mml:mrow><mml:mn mathvariant="normal">3.0</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">19.8</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T5" specific-use="star"><?xmltex \currentcnt{5}?><label>Table 5</label><caption><p id="d1e7634">Comparisons of GEOS-Chem-simulated mole fractions assimilating
MOPITT data with HIPPO-4 observations. Uncertainties are <inline-formula><mml:math id="M376" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula>. Units are in parts per billion. See text for descriptions of the assimilations.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="5">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Latitudinal bands</oasis:entry>
         <oasis:entry colname="col2">Prior VMR</oasis:entry>
         <oasis:entry colname="col3">Orig. MOPITT</oasis:entry>
         <oasis:entry colname="col4">Assim. 2</oasis:entry>
         <oasis:entry colname="col5">Assim. 3</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M377" display="inline"><mml:mrow><mml:mfenced open="[" close="]"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">40</mml:mn><mml:mo>,</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:mfenced></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M378" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2.0</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5.4</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M379" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.3</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5.9</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M380" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5.4</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M381" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.4</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5.8</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M382" display="inline"><mml:mrow><mml:mfenced close="]" open="["><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">20</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:mfenced></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M383" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">6.8</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">6.0</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M384" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.5</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">6.5</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M385" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5.5</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">6.4</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M386" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.4</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">6.5</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M387" display="inline"><mml:mrow><mml:mfenced open="[" close="]"><mml:mrow><mml:mn mathvariant="normal">20</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">40</mml:mn></mml:mrow></mml:mfenced></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M388" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">13.2</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">17.9</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M389" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2.9</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">18.9</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M390" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">8.6</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">18.2</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M391" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2.7</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">19.0</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M392" display="inline"><mml:mrow><mml:mfenced close="]" open="["><mml:mrow><mml:mn mathvariant="normal">40</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">60</mml:mn></mml:mrow></mml:mfenced></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M393" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3.5</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">27.3</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M394" display="inline"><mml:mrow><mml:mn mathvariant="normal">12.1</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">26.6</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M395" display="inline"><mml:mrow><mml:mn mathvariant="normal">4.2</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">27.1</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M396" display="inline"><mml:mrow><mml:mn mathvariant="normal">12.4</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">26.6</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M397" display="inline"><mml:mrow><mml:mfenced close="]" open="["><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">90</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">90</mml:mn></mml:mrow></mml:mfenced></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M398" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4.1</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">17.9</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M399" display="inline"><mml:mrow><mml:mn mathvariant="normal">6.0</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">19.2</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M400" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.5</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">18.5</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M401" display="inline"><mml:mrow><mml:mn mathvariant="normal">6.3</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">19.3</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e8069">To validate the quality of the filtered and bias-corrected MOPITT observations, the prior <inline-formula><mml:math id="M402" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> fluxes are compared with the a posteriori fluxes (Fig. <xref ref-type="fig" rid="Ch1.F9"/>). Again we find that assimilations 1 and 3 are in general agreement and Assimilation 2 produces lower fluxes. Fluxes using assimilated data are nearly always smaller than fluxes using the prior fluxes scaled up by 50 %. Assimilation 2, which includes scaling MOPITT to the standard TCCON product, produces fluxes that are in between the unscaled (lower) and scaled (higher) prior fluxes. Though fluxes from Assimilation 2 are closest to the unscaled prior fluxes, they are higher by about 30 % and 15 % during HIPPO-2 and HIPPO-4, respectively.</p>

      <?xmltex \floatpos{!h}?><fig id="Ch1.F9" specific-use="star"><?xmltex \currentcnt{9}?><label>Figure 9</label><caption><p id="d1e8084">Emission estimates from assimilations in GEOS-Chem adjoint model for two different times. For this figure, global emissions are scaled down by 2. SEA is southeastern Asia.</p></caption>
        <?xmltex \igopts{width=426.791339pt}?><graphic xlink:href="https://amt.copernicus.org/articles/12/5547/2019/amt-12-5547-2019-f09.png"/>

      </fig>

      <p id="d1e8093">These results are inconclusive as to which of the assimilations is best. Comparisons with HIPPO mole fractions are mixed, and uncertainties in the assimilated prior fluxes prevent us from drawing definitive conclusions from the flux comparison. It is unclear if the filtering and bias corrections improved fluxes in these experiments.</p>
</sec>
<sec id="Ch1.S6">
  <label>6</label><title>Discussion</title>
<sec id="Ch1.S6.SS1">
  <label>6.1</label><title>Practical considerations in intercomparisons of remote sounding retrievals</title>
      <p id="d1e8111">In addition to the formal aspects of intercomparing retrievals from different remote sounding retrievals, there are a variety of practical aspects to consider. For several of these aspects, an entire study could be devoted to them for each intercomparison. We summarize our comparison methodology in Table <xref ref-type="table" rid="Ch1.T6"/> and give examples of other studies that provide additional details or alternative methods. Though it is impractical to test all combinations of different considerations, we test some as described in Sect. <xref ref-type="sec" rid="Ch1.S4.SS2"/>, such as coincidence criteria, filtering, bias corrections, and applications of averaging kernels.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T6" specific-use="star"><?xmltex \currentcnt{6}?><label>Table 6</label><caption><p id="d1e8121">Summary of practical considerations comparing MOPITT and TCCON soundings.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Practical consideration</oasis:entry>
         <oasis:entry colname="col2">Example</oasis:entry>
         <oasis:entry colname="col3">This work</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Coincidence criteria</oasis:entry>
         <oasis:entry colname="col2">
                    <xref ref-type="bibr" rid="bib1.bibx55" id="text.133"/>
                  </oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M403" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M404" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">30</mml:mn></mml:mrow></mml:math></inline-formula> min (typically); Sect. <xref ref-type="sec" rid="Ch1.S4.SS1"/></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Weighted averaging</oasis:entry>
         <oasis:entry colname="col2"><xref ref-type="bibr" rid="bib1.bibx30" id="text.134"/> (distance and time)</oasis:entry>
         <oasis:entry colname="col3">On reported errors <inline-formula><mml:math id="M405" display="inline"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msup><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:math></inline-formula>; Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Weighted average error</oasis:entry>
         <oasis:entry colname="col2">
                    <xref ref-type="bibr" rid="bib1.bibx23" id="text.135"/>
                  </oasis:entry>
         <oasis:entry colname="col3">Gatz–Smith method; Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Representation errors (e.g., <inline-formula><mml:math id="M406" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col2"><xref ref-type="bibr" rid="bib1.bibx3" id="text.136"/>, <xref ref-type="bibr" rid="bib1.bibx76" id="text.137"/></oasis:entry>
         <oasis:entry colname="col3">Accounting for surface <inline-formula><mml:math id="M407" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula>; Sect. <xref ref-type="sec" rid="Ch1.S4.SS1"/></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Filtering</oasis:entry>
         <oasis:entry colname="col2">Genetic algorithms, e.g., <xref ref-type="bibr" rid="bib1.bibx49" id="text.138"/></oasis:entry>
         <oasis:entry colname="col3">Chosen using SRA; Sect. <xref ref-type="sec" rid="Ch1.S3.SS3"/></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Bias corrections</oasis:entry>
         <oasis:entry colname="col2"><xref ref-type="bibr" rid="bib1.bibx86" id="text.139"/>, <xref ref-type="bibr" rid="bib1.bibx58" id="text.140"/></oasis:entry>
         <oasis:entry colname="col3">Primarily pixel-based; Sect. <xref ref-type="sec" rid="Ch1.S3.SS4"/></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Accounting for different <inline-formula><mml:math id="M408" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M409" display="inline"><mml:mi mathvariant="bold">A</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><xref ref-type="bibr" rid="bib1.bibx64" id="text.141"/>, <xref ref-type="bibr" rid="bib1.bibx86" id="text.142"/></oasis:entry>
         <oasis:entry colname="col3">Sect. S6</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Pre-averaging</oasis:entry>
         <oasis:entry colname="col2"><xref ref-type="bibr" rid="bib1.bibx3" id="text.143"/>, Appendix B therein</oasis:entry>
         <oasis:entry colname="col3">Typically pointwise application of <inline-formula><mml:math id="M410" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>; <inline-formula><mml:math id="M411" display="inline"><mml:mi mathvariant="bold">A</mml:mi></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Vertical regridding</oasis:entry>
         <oasis:entry colname="col2">
                    <xref ref-type="bibr" rid="bib1.bibx14" id="text.144"/>
                  </oasis:entry>
         <oasis:entry colname="col3">Mass conserving; Appendix <xref ref-type="sec" rid="App1.Ch1.S3"/></oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</sec>
<sec id="Ch1.S6.SS2">
  <label>6.2</label><title>Considerations for future MOPITT data use</title>
      <p id="d1e8396">Several lessons learned in this study may be useful for future versions of MOPITT data products or users assimilating the data. Additional fields used in the retrieval, such as the a priori mixing ratio from 50 to 0 hPa and the water vapor profile, would be useful outputs when converting mixing ratios from whole air to dry air. Though the prior covariance matrix is fixed <xref ref-type="bibr" rid="bib1.bibx8" id="paren.145"/>, a single matrix per daily file may be helpful. The retrieved surface emissivity over<?pagebreak page5563?> land is on average about 0.007, or about 0.75 % larger than the prior emissivity, and the retrieved surface temperature is on average about 6 K larger than the prior temperatures (see histograms in Fig. S5f and S5m). This suggests that prior surface emissivity and temperature values should perhaps be reconsidered, as they may be biased low over land. Further updates to prior values of <inline-formula><mml:math id="M412" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M413" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M414" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> are expected to further improve the retrievals. For example, the retrieved column <inline-formula><mml:math id="M415" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> is slightly larger than the a priori column globally (Fig. S16), but the difference depends on the level and could be related to uncertainties in model transport, sinks, and sources.</p>
      <p id="d1e8444">Filtering can reduce spurious values. MOPITT files include parameters that could be used in filtering, such as a retrieval anomaly diagnostic, various cloud indicators, and the DOF. Data users should consider creating a QC flag for their analyses, or a binary flag could be included in future versions, e.g., based on parameters in Table <xref ref-type="table" rid="Ch1.T3"/> or based on the recommendations of the MOPITT team (e.g., the L3 filters). Often highly deviant retrieved surface temperatures show up around coastlines (especially western coastlines; Fig. S10) that did not pass our quality screening. These may be related to sounding definitions of surface type. SNR 6A is used to filter MOPITT data when creating the TIR–NIR L3 product<?pagebreak page5564?> to maintain consistency with the NIR product and increase stability of the DOF, but we do not find sufficient evidence to use it as a TIR–NIR filter criterion based on <inline-formula><mml:math id="M416" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> stability alone.</p>
      <p id="d1e8460">When biases are found in the MOPITT L2 data, the strategy is to correct the L1 radiances or the retrieval algorithm <xref ref-type="bibr" rid="bib1.bibx13" id="paren.146"><named-content content-type="pre">e.g.,</named-content></xref>. MOPITT data users of L2 <inline-formula><mml:math id="M417" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> may consider implementing a bias correction before analysis or model assimilation. In terms of <inline-formula><mml:math id="M418" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, pixel-3 data agree with pixels 2 and 4; however, this agreement may not necessarily hold for retrieved profiles, and pixel-3 data are excluded in the L3 product due to excessive NIR noise and in order to increase stability in the DOF <xref ref-type="bibr" rid="bib1.bibx10" id="paren.147"><named-content content-type="pre">e.g.,</named-content></xref>. A bias correction should be considered when assimilating pixel 1. There is a bias in the SRA for large retrieval errors on <inline-formula><mml:math id="M419" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> above about 8 ppb (Figs. S4o, S5o). This bias suggests that perhaps these data should be excluded or deweighted further, which we did not do here. A bias adjustment field could also be included as a field in future MOPITT files. Such an adjustment could account for empirical biases noted with various parameters; pixel-to-pixel biases (Sect. <xref ref-type="sec" rid="Ch1.S3.SS4"/>); and an overall bias compared with NDACC <xref ref-type="bibr" rid="bib1.bibx3" id="paren.148"/>, aircraft flights <xref ref-type="bibr" rid="bib1.bibx12" id="paren.149"/>, and/or TCCON.</p>
</sec>
</sec>
<sec id="Ch1.S7" sec-type="conclusions">
  <label>7</label><title>Conclusions</title>
      <p id="d1e8524">In this study quality-filtered and bias-corrected MOPITT data are compared with TCCON data. We first derive filters using only the MOPITT data, assuming homogeneity over small regions. These filters have the largest effectover snow or ice scenes and over high terrain. They reduce the overall RMS from 3.84 to 2.55 ppb. We find and correct a bias among the four pixels, which we confirmed exists using AirCore. We also find and correct a feature bias.</p>
      <p id="d1e8527">After the filtering and bias correction, we compare with TCCON data. Using a method (method II; see Sect. S6.1) similar to <xref ref-type="bibr" rid="bib1.bibx86" id="text.150"/> to account for differences in a priori profiles and AKs, we find MOPITT data to be biased high by about 6 % compared with TCCON, but it is not clear whether MOPITT or TCCON is biased. We also test different methods, which all lead to a bias of about 6 %–10 %. There is a trend of <inline-formula><mml:math id="M420" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.06</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.06</mml:mn></mml:mrow></mml:math></inline-formula> % yr<inline-formula><mml:math id="M421" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the MOPITT–TCCON difference. The bias also appears to depend on site and latitude, but the scatter is not consistent enough to derive a correction. We also compared AKs and information content from the different retrievals. TCCON AKs are more sensitive to changes in the stratosphere. MOPITT AKs peak in the mid-troposphere and can vary significantly among locations.</p>
      <p id="d1e8559">After applying filtering, and an overall scaling to match the TCCON, we assimilate the data into GEOS-Chem. Filtering and bias correction are uniform enough to not make a large difference among regional fluxes. When data are also scaled down to TCCON before implementing into GEOS-Chem, fluxes were lower in all regions. However, because of bottom-up uncertainties in global <inline-formula><mml:math id="M422" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> fluxes, these experiments were inconclusive. Additional work is needed to understand the relatively large (<inline-formula><mml:math id="M423" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:math></inline-formula> %) difference between MOPITT and TCCON.</p>
</sec>

      
      </body>
    <back><notes notes-type="dataavailability"><title>Data availability</title>

      <p id="d1e8584">MOPITT data were obtained from the NASA Langley server (<uri>ftp://l5ftl01.larc.nasa.gov/MOPITT/</uri>, last access: 12 December 2018). TCCON data were obtained through the TCCON data archive hosted by CaltechDATA <xref ref-type="bibr" rid="bib1.bibx74" id="paren.151"/>. See Table <xref ref-type="table" rid="Ch1.T1"/> for data references for each site. TCCON data without the scaling to the WMO scale were obtained from the site PIs. AirCore data were obtained from Colm Sweeney (v20170918).</p>
  </notes><?xmltex \hack{\clearpage}?><app-group>

<?pagebreak page5565?><app id="App1.Ch1.S1">
  <?xmltex \currentcnt{A}?><label>Appendix A</label><?xmltex \opttitle{Calculation of {$\protect\chem{X_{{CO}}}$} and weighted averaging}?><title>Calculation of <inline-formula><mml:math id="M424" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and weighted averaging</title>
      <p id="d1e8618">The MOPITT V7 data product contains fields for retrieved total column CO (in molec. cm<inline-formula><mml:math id="M425" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>). Unlike the TCCON, MOPITT does not retrieve a dry-air column. However, a model dry-air column is provided. We obtain a dry-air mole fraction from
          <disp-formula id="App1.Ch1.S1.E7" content-type="numbered"><label>A1</label><mml:math id="M426" display="block"><mml:mrow><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">X</mml:mi><mml:mi mathvariant="normal">CO</mml:mi></mml:msub></mml:mrow><mml:mo>,</mml:mo><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mtext>retrieved</mml:mtext><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mtext>column</mml:mtext></mml:mrow><mml:mtext>model dry air column</mml:mtext></mml:mfrac></mml:mstyle><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">9</mml:mn></mml:msup><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
        The retrieval error (in molec. cm<inline-formula><mml:math id="M427" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) can be converted to parts per billion in the same way.</p>
      <p id="d1e8687">When averaging <inline-formula><mml:math id="M428" display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula> soundings together, we use a weighted average using the inverse squared retrieval errors as weights. The average retrieved value <inline-formula><mml:math id="M429" display="inline"><mml:mover accent="true"><mml:mover accent="true"><mml:mi>y</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula> is
          <disp-formula id="App1.Ch1.S1.E8" content-type="numbered"><label>A2</label><mml:math id="M430" display="block"><mml:mrow><mml:mover accent="true"><mml:mover accent="true"><mml:mi>y</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:munderover><mml:msub><mml:mover accent="true"><mml:mi>y</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub><mml:msubsup><mml:mover accent="true"><mml:mi>y</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">err</mml:mi></mml:mrow><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mrow><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:munderover><mml:msubsup><mml:mover accent="true"><mml:mi>y</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">err</mml:mi></mml:mrow><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
        where <inline-formula><mml:math id="M431" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>y</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> denotes an individual measurement in the bin, and <inline-formula><mml:math id="M432" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>y</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">err</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> is the corresponding error. When an average weighted error is needed, we calculate a weighted standard error of the mean (SEM) using
          <disp-formula id="App1.Ch1.S1.E9" content-type="numbered"><label>A3</label><mml:math id="M433" display="block"><mml:mrow><?xmltex \hack{\hbox\bgroup\fontsize{9.5}{9.5}\selectfont$\displaystyle}?><mml:mtext mathvariant="normal">SEM</mml:mtext><mml:mo>=</mml:mo><mml:msqrt><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>n</mml:mi><mml:mrow><mml:mfenced close=")" open="("><mml:mrow><mml:mi>n</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:mfenced><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:munderover><mml:msubsup><mml:mover accent="true"><mml:mi>y</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">err</mml:mi></mml:mrow><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mi>i</mml:mi><mml:mi>n</mml:mi></mml:munderover><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msubsup><mml:mover accent="true"><mml:mi>y</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">err</mml:mi></mml:mrow><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>y</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mover accent="true"><mml:mi>y</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:msqrt><mml:mo>.</mml:mo><?xmltex \hack{$\egroup}?></mml:mrow></mml:math></disp-formula>
        In the case of uniform weights <inline-formula><mml:math id="M434" display="inline"><mml:mrow><mml:msubsup><mml:mover accent="true"><mml:mi>y</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">err</mml:mi></mml:mrow><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow></mml:math></inline-formula>, this reduces to the typical SEM equation. We also test a bootstrap analysis <xref ref-type="bibr" rid="bib1.bibx19" id="paren.152"/> on binned data for one of the parameters (DEsfc) in the bias correction analysis (Sect. <xref ref-type="sec" rid="Ch1.S3.SS4"/>) to evaluate Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E9"/>). Data are placed into 146 bins, with at least 2000 points in each. The bootstrap is run 500 times per bin. We find, in agreement with <xref ref-type="bibr" rid="bib1.bibx23" id="text.153"/>, that Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E9"/>) is a reasonable approximation to the SEM determined from the bootstrap method, with an offset of only <inline-formula><mml:math id="M435" display="inline"><mml:mrow><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.2</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">3.1</mml:mn></mml:mrow></mml:math></inline-formula> % (<inline-formula><mml:math id="M436" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula>).</p>
</app>

<app id="App1.Ch1.S2">
  <?xmltex \currentcnt{B}?><label>Appendix B</label><title>MOPITT column-averaging kernel</title>
      <p id="d1e9011">We derive our own MOPITT column-averaging-kernel (AK) vector based on the full averaging-kernel matrix. To fulfill Eq. (<xref ref-type="disp-formula" rid="Ch1.E2"/>) (and using Eq. <xref ref-type="disp-formula" rid="Ch1.E4"/>), MOPITT AK elements <inline-formula><mml:math id="M437" display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are
          <disp-formula id="App1.Ch1.S2.E10" content-type="numbered"><label>B1</label><mml:math id="M438" display="block"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>c</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>log⁡</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mo>∑</mml:mo><mml:mi>i</mml:mi></mml:msub><mml:msub><mml:mi>h</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:msub><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>log⁡</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
        Making use of <inline-formula><mml:math id="M439" display="inline"><mml:mrow><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>log⁡</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub><mml:msub><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub><mml:mi>ln⁡</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M440" display="inline"><mml:mrow><mml:msub><mml:mi>A</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>log⁡</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub><mml:msub><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>log⁡</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></inline-formula>,
          <disp-formula id="App1.Ch1.S2.E11" content-type="numbered"><label>B2</label><mml:math id="M441" display="block"><mml:mtable columnspacing="1em" class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:munder><mml:mo movablelimits="false">∑</mml:mo><mml:mi>i</mml:mi></mml:munder><mml:msub><mml:mi>h</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>log⁡</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mi>ln⁡</mml:mi><mml:mn mathvariant="normal">10</mml:mn><mml:munder><mml:mo movablelimits="false">∑</mml:mo><mml:mi>i</mml:mi></mml:munder><mml:msub><mml:mi>h</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:msub><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>log⁡</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub><mml:msub><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>log⁡</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:mi>ln⁡</mml:mi><mml:mn mathvariant="normal">10</mml:mn><mml:munder><mml:mo movablelimits="false">∑</mml:mo><mml:mi>i</mml:mi></mml:munder><mml:msub><mml:mi>h</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:msub><mml:mover accent="true"><mml:mi>x</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub><mml:msub><mml:mi>A</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
        This MOPITT column-averaging kernel is not directly comparable with the TCCON column-averaging kernels because of the log scale. A unitless column-averaging kernel can be made but requires an a priori assumption about the true state of the atmosphere. For example,
          <disp-formula id="App1.Ch1.S2.E12" content-type="numbered"><label>B3</label><mml:math id="M442" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msub><mml:mi>h</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>c</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msub><mml:mi>h</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>c</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>log⁡</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>log⁡</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:msub><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msub><mml:mi>h</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>x</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mi>ln⁡</mml:mi><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula></p>
</app>

<app id="App1.Ch1.S3">
  <?xmltex \currentcnt{C}?><label>Appendix C</label><title>Vertical regridding</title>
      <p id="d1e9485">We find it necessary to express values from one retrieval on the vertical pressure grid of the other. MOPITT profiles are reported as layer averages, but TCCON profiles are reported as level values. TCCON profiles are converted to the MOPITT grid by linear interpolation. We divide each MOPITT layer into 500 finer equal-pressure layers (about 0.4 hPa each). We interpolate the TCCON profiles to these finer layers and then take the overall average to put the TCCON profile on the MOPITT pressure grid.</p>
      <p id="d1e9488">Basic interpolation on the midpoints should not be used to convert the MOPITT layer averages to the TCCON grid because it does not require that mass be conserved when the layers have different widths. Instead we use a mass-conserving linear-interpolation scheme based on the MOPITT layer averages. This is based on the work of <xref ref-type="bibr" rid="bib1.bibx28" id="text.154"/> and <xref ref-type="bibr" rid="bib1.bibx14" id="text.155"/>.</p>
</app>

<app id="App1.Ch1.S4">
  <?xmltex \currentcnt{D}?><label>Appendix D</label><title>Comparison of profiles</title>
      <p id="d1e9505">The a priori profiles differ between MOPITT and TCCON. This could lead to different intercomparison results depending on which is chosen as a comparison ensemble. In general, the TCCON a priori profiles are smooth, with only 3-D variation (time, latitude, and altitude) that takes into account the local tropopause height. MOPITT a priori profiles are 4-D (time, latitude, longitude, and altitude) and hence differ in locations with strong local pollution (e.g., Pasadena). Examples of prior and retrieved profiles and their differences for several sites are in Fig. <xref ref-type="fig" rid="App1.Ch1.S4.F10"/>. Global maps of the average ratios between the retrieved and prior values for MOPITT are available in Sect. S9.</p>

      <?xmltex \floatpos{h!}?><fig id="App1.Ch1.S4.F10"><?xmltex \currentcnt{D1}?><label>Figure D1</label><caption><p id="d1e9512">Profiles and profile differences between MOPITT and TCCON for six select sites and different days in 2013. For clarity, only one MOPITT profile within the coincidence criteria is selected per day. The rows are the TCCON a priori profiles (<inline-formula><mml:math id="M443" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>), the MOPITT a priori profiles (<inline-formula><mml:math id="M444" display="inline"><mml:mrow><mml:msub><mml:mi>M</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>), the MOPITT retrieved profiles (<inline-formula><mml:math id="M445" display="inline"><mml:mrow><mml:msub><mml:mi>M</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>), the difference between TCCON and MOPITT a priori profiles, and the difference between MOPITT a priori and retrieved profiles.</p></caption>
        <?xmltex \hack{\hsize\textwidth}?>
        <?xmltex \igopts{width=497.923228pt}?><graphic xlink:href="https://amt.copernicus.org/articles/12/5547/2019/amt-12-5547-2019-f10.png"/>

      </fig>

<?xmltex \hack{\clearpage}?><supplementary-material position="anchor"><p id="d1e9557">The supplement related to this article is available online at: <inline-supplementary-material xlink:href="https://doi.org/10.5194/amt-12-5547-2019-supplement" xlink:title="pdf">https://doi.org/10.5194/amt-12-5547-2019-supplement</inline-supplementary-material>.</p></supplementary-material>
</app>
  </app-group><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d1e9568">JKH and DW were involved in the overall conceptualization, investigation, and methodology development. DW secured funding and computational resources and provided supervision. TLH wrote the original Sect. 5 draft. JKH did the formal analysis and visualization and wrote the remainder of the original draft. TLH and DBAJ created methodology for and performed the GEOS-Chem assimilations and comparisons with HIPPO data.  CS and BCB provided the AirCore data, and MDM, NMD, MKD, DGF, DWTG, FH, LTI, PJ, MK, RK, CL, IM, JN, YSO, HO, DFP, MR, SR, CMR, MS, K Shiomi, K Strong, RS, YT, OU, VAV, WW, TW, POW, and DW provided the TCCON data, which involves independent funding acquisition, site management, data acquisition and processing, QA/QC (quality assurance/quality control), and delivery. RRB and HMW provided guidance on MOPITT data and insight into the MOPITT instrument, algorithm, and previous validation results. JKH, DW, DBAJ, RRB, NMD, FH, MK, IM, JN, RS, POW, HMW, CS, and BCB reviewed the paper. JKH and DW implemented edits to the paper.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d1e9574">The authors declare that they have no conflict of interest.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e9581">This project is undertaken with the financial support of the Canadian Space Agency (CSA) through the Earth System Science Data Analyses program (grant no. 16SUASCOBF).</p><p id="d1e9583">This paragraph contains TCCON site acknowledgements as requested by site PIs and co-authors. The Ascension Island TCCON station has been supported by the European Space Agency (ESA) under grant no. 3-14737 and by the German Bundesministerium für Wirtschaft und Energie (BMWi) under grant nos. 50EE1711C and 50EE1711E. We thank the ESA Ariane tracking station at North East Bay, Ascension Island, for hosting and local support. The Four Corners and Manaus TCCON stations have been supported by LANL-LDRD. The Eureka TCCON measurements were made at the Polar Environment Atmospheric Research Laboratory (PEARL) by the Canadian Network for the Detection of Atmospheric Change (CANDAC), primarily supported by the CSA, NSERC, and Environment and Climate Change Canada (ECCC). The East Trout Lake TCCON station is supported by the Canada Foundation for Innovation, the Ontario Research Fund, and ECCC. Work at Anmyeondo was funded by Korea Meteorological Administration Research and Development Program “Research and Development for KMA Weather, Climate, and Earth System Services” under grant KMA2018-00321. The TCCON projects for Rikubetsu, Tsukuba, and Burgos sites are supported in part by the GOSAT series project. Site support for Burgos is provided by the Energy Development Corporation (EDC, Philippines). Nicholas M. Deutscher is supported by an ARC Future Fellowship, FT180100327.</p><p id="d1e9585">We thank the MOPITT team for providing the MOPITT data – especially Merritt Deeter and James Drummond for helpful discussions. We thank Geoff Toon for developing the GGG2014 code used to process the TCCON data. We acknowledge the TCCON co-investigators and site technicians who have also helped maintain sites and provide data throughout the years as well as the respective funding organizations that supported the TCCON measurements at the various sites. Specifically we acknowledge Thomas Blumenstock, Youwen Sun, Joseph Mendonca, and Tae-Young Goo.</p><p id="d1e9587">We thank Roisin Commane, Enrico Dammers, Benjamin Gaubert, Junjie Liu, Anna Michalak, Charles Miller, Katherine Saad, Mahesh Sha, and Felix Vogel for helpful discussions. We especially thank Merritt Deeter, John Gille, and Geoff Toon for providing feedback on the paper.</p><p id="d1e9589">We thank Chris O'Dell and one anonymous reviewer for reviewing this paper. We thank Andre Butz for serving as editor.</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d1e9594">This research has been supported by the Canadian Space Agency (grant no. 16SUASCOBF), the European Space Agency (grant no. 3-14737), the Bundesministerium für Wirtschaft und Energie (grant no. 50EE1711C), the Los Alamos National Laboratory (grant no. LANL-LDRD), the Korea Meteorological Administration (grant no. KMA2018-00321), the Japan Aerospace Exploration Agency (grant no. GOSAT series), and the Australian Research Council (grant no. FT180100327).</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d1e9600">This paper was edited by Andre Butz and reviewed by Christopher O'Dell and one anonymous referee.</p>
  </notes><ref-list>
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    <!--<article-title-html>Evaluation of MOPITT Version 7 joint TIR–NIR X<sub>CO</sub>  retrievals with TCCON</article-title-html>
<abstract-html><p>Observations of carbon monoxide (CO) from the Measurements Of Pollution In The Troposphere (MOPITT) instrument aboard the Terra spacecraft were expected to have an accuracy of 10&thinsp;% prior to the launch in 1999. Here we evaluate MOPITT Version 7 joint (V7J) thermal-infrared and near-infrared (TIR–NIR) retrieval accuracy and precision and suggest ways to further improve the accuracy of the observations. We take five steps involving filtering or bias corrections to reduce scatter and bias in the data relative to other MOPITT soundings and ground-based measurements. (1) We apply a preliminary filtering scheme in which measurements over snow and ice are removed. (2) We find a systematic pairwise bias among the four MOPITT along-track detectors (pixels) on the order of 3–4&thinsp;ppb with a small temporal trend, which we remove on a global scale using a temporally trended bias correction. (3) Using a small-region approximation (SRA), a new filtering scheme is developed and applied based on additional quality indicators such as the signal-to-noise ratio (SNR). After applying these new filters, the root-mean-squared error computed using the local median from the SRA over 16 years of global observations decreases from 3.84 to 2.55&thinsp;ppb. (4) We also use the SRA to find variability in MOPITT retrieval anomalies that relates to retrieval parameters. We apply a bias correction to one parameter from this analysis. (5) After applying the previous bias corrections and filtering, we compare the MOPITT results with the GGG2014 ground-based Total Carbon Column Observing Network (TCCON) observations to obtain an overall global bias correction. These comparisons show that MOPITT V7J is biased high by about 6&thinsp;%–8&thinsp;%, which is similar to past studies using independent validation datasets on V6J. When using TCCON spectrometric column retrievals without the standard airmass correction or scaling to aircraft (WMO scale), the ground- and satellite-based observations overall agree to better than 0.5&thinsp;%. GEOS-Chem data assimilations are used to estimate the influence of filtering and scaling to TCCON on global CO and tend to pull concentrations away from the prior fluxes and closer to the truth. We conclude with suggestions for further improving the MOPITT data products.</p></abstract-html>
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