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  <front>
    <journal-meta><journal-id journal-id-type="publisher">AMT</journal-id><journal-title-group>
    <journal-title>Atmospheric Measurement Techniques</journal-title>
    <abbrev-journal-title abbrev-type="publisher">AMT</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Atmos. Meas. Tech.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1867-8548</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/amt-14-6795-2021</article-id><title-group><article-title>UAS Chromatograph for Atmospheric Trace Species (UCATS) –<?xmltex \hack{\break}?> a versatile
instrument for trace gas measurements <?xmltex \hack{\break}?>on airborne platforms</article-title><alt-title>UAS Chromatograph for Atmospheric Trace Species (UCATS)</alt-title>
      </title-group><?xmltex \runningtitle{UAS Chromatograph for Atmospheric Trace Species (UCATS)}?><?xmltex \runningauthor{E. J. Hintsa  et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1 aff2">
          <name><surname>Hintsa</surname><given-names>Eric J.</given-names></name>
          <email>eric.j.hintsa@noaa.gov</email>
        <ext-link>https://orcid.org/0000-0002-5289-630X</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2">
          <name><surname>Moore</surname><given-names>Fred L.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2">
          <name><surname>Hurst</surname><given-names>Dale F.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-6315-2322</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2">
          <name><surname>Dutton</surname><given-names>Geoff S.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-7777-9268</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Hall</surname><given-names>Bradley D.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2">
          <name><surname>Nance</surname><given-names>J. David</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2">
          <name><surname>Miller</surname><given-names>Ben R.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Montzka</surname><given-names>Stephen A.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-9396-0400</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2">
          <name><surname>Wolton</surname><given-names>Laura P.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-2028-0236</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2">
          <name><surname>McClure-Begley</surname><given-names>Audra</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Elkins</surname><given-names>James W.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2">
          <name><surname>Hall</surname><given-names>Emrys G.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-5137-2902</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2">
          <name><surname>Jordan</surname><given-names>Allen F.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-6178-4502</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Rollins</surname><given-names>Andrew W.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff3">
          <name><surname>Thornberry</surname><given-names>Troy D.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-7478-1944</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff3">
          <name><surname>Watts</surname><given-names>Laurel A.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff3">
          <name><surname>Thompson</surname><given-names>Chelsea R.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-7332-9945</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff3">
          <name><surname>Peischl</surname><given-names>Jeff</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-9320-7101</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff3">
          <name><surname>Bourgeois</surname><given-names>Ilann</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-2875-1258</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Ryerson</surname><given-names>Thomas B.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-2800-7581</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Daube</surname><given-names>Bruce C.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4 aff5 aff6">
          <name><surname>Gonzalez Ramos</surname><given-names>Yenny</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4 aff7 aff8">
          <name><surname>Commane</surname><given-names>Roisin</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-1373-1550</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Santoni</surname><given-names>Gregory W.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Pittman</surname><given-names>Jasna V.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Wofsy</surname><given-names>Steven C.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff9">
          <name><surname>Kort</surname><given-names>Eric</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff10">
          <name><surname>Diskin</surname><given-names>Glenn S.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-3617-0269</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff11">
          <name><surname>Bui</surname><given-names>T. Paul</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>Cooperative Institute for Research in Environmental Sciences,
University of Colorado Boulder, Boulder, CO 80309, USA</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Global Monitoring Laboratory, NOAA, Boulder, CO 80305, USA</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Chemical Sciences Laboratory, NOAA, Boulder, CO 80305, USA</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>John A. Paulson School of Engineering and Applied Sciences, Harvard
University, Cambridge, MA 02138, USA</institution>
        </aff>
        <aff id="aff5"><label>5</label><institution>CIMEL Electronique, Paris, 75011, France</institution>
        </aff>
        <aff id="aff6"><label>6</label><institution>Izaña Atmospheric Research Center, Santa Cruz de Tenerife, 38001,
Spain</institution>
        </aff>
        <aff id="aff7"><label>7</label><institution>Department of Earth and Environmental Sciences, Columbia University, New
York, NY 10027, USA</institution>
        </aff>
        <aff id="aff8"><label>8</label><institution>Lamont-Doherty Earth Observatory, Columbia University, Palisades, NY
10964, USA</institution>
        </aff>
        <aff id="aff9"><label>9</label><institution>Climate and Space Sciences and Engineering, University of Michigan,
Ann Arbor, MI 48109, USA</institution>
        </aff>
        <aff id="aff10"><label>10</label><institution>NASA Langley Research Center, Hampton, VA 23681, USA</institution>
        </aff>
        <aff id="aff11"><label>11</label><institution>NASA Ames Research Center, Mountain View, CA 94035, USA</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Eric J. Hintsa (eric.j.hintsa@noaa.gov)</corresp></author-notes><pub-date><day>21</day><month>October</month><year>2021</year></pub-date>
      
      <volume>14</volume>
      <issue>10</issue>
      <fpage>6795</fpage><lpage>6819</lpage>
      <history>
        <date date-type="received"><day>16</day><month>December</month><year>2020</year></date>
           <date date-type="rev-request"><day>25</day><month>January</month><year>2021</year></date>
           <date date-type="rev-recd"><day>29</day><month>June</month><year>2021</year></date>
           <date date-type="accepted"><day>14</day><month>July</month><year>2021</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2021 </copyright-statement>
        <copyright-year>2021</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://amt.copernicus.org/articles/.html">This article is available from https://amt.copernicus.org/articles/.html</self-uri><self-uri xlink:href="https://amt.copernicus.org/articles/.pdf">The full text article is available as a PDF file from https://amt.copernicus.org/articles/.pdf</self-uri>
      <abstract><title>Abstract</title>
    <p id="d1e411">UCATS (the UAS Chromatograph for Atmospheric Trace Species) was
designed and built for observations of important atmospheric trace gases
from unmanned aircraft systems (UAS) in the upper troposphere and lower
stratosphere (UTLS). Initially it measured major chlorofluorocarbons (CFCs)
and the stratospheric transport tracers nitrous oxide (N<inline-formula><mml:math id="M1" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O) and sulfur
hexafluoride (SF<inline-formula><mml:math id="M2" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula>), using gas chromatography with electron capture
detection. Compact commercial absorption spectrometers for ozone (O<inline-formula><mml:math id="M3" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>)
and water vapor (H<inline-formula><mml:math id="M4" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O) were added to enhance its capabilities on
platforms with relatively small payloads. UCATS has since been reconfigured
to measure methane (CH<inline-formula><mml:math id="M5" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula>), carbon monoxide (CO), and molecular hydrogen
(H<inline-formula><mml:math id="M6" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>) instead of CFCs and has undergone numerous upgrades to its
subsystems. It has served as part of large payloads on stratospheric UAS
missions to probe the tropical tropopause region and transport of air into
the stratosphere; in piloted aircraft studies of greenhouse gases,
transport, and chemistry in the troposphere; and in 2021 is scheduled to
return to the study of stratospheric ozone and halogen compounds, one of its
original goals. Each deployment brought different challenges, which were
largely met or resolved. The design, capabilities, modifications, and some
results from UCATS are shown and described here, including changes for
future missions.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d1e478">Accurate and precise measurements of trace gases and other atmospheric
parameters have resulted in an ever more detailed understanding of the
chemistry and physics of Earth's<?pagebreak page6796?> atmosphere. This has allowed progress on
environmental issues of global concern, including stratospheric ozone
depletion and air pollution in the lower atmosphere. For example, after the
first report of the Antarctic “ozone hole” (Farman et al., 1985), a
combination of measurements from balloons, aircraft, and satellites, backed
by a wide range of laboratory, theoretical, and modeling studies, allowed a
sufficient grasp of the problem to develop an effective international
response relatively quickly (Douglass et al., 2014). Though ozone loss and
organic halogen emissions are still ongoing matters of concern, climate
change driven by greenhouse gas emissions is now the overarching
environmental problem today, while air quality continues to be an important
issue as well.</p>
      <p id="d1e481">The Halocarbons and other Atmospheric Trace Species (HATS) group in what is
now the Global Monitoring Laboratory (GML) at the National Oceanic and
Atmospheric Administration (NOAA) in Boulder, CO, has long been involved in
measuring N<inline-formula><mml:math id="M7" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O, CFCs, and other trace gases, primarily by using gas
chromatography (GC) with electron capture detectors (ECDs). This led to
participation in a series of airborne missions to study halogen budgets,
ozone loss, and stratospheric transport, starting on the NASA ER-2 aircraft
in 1991 (Elkins et al., 1996). GCs are well suited to measuring multiple
trace species in the atmosphere, because with an appropriate column, several
compounds can be separated and detected with the same instrument. ECDs are
extremely sensitive (a few parts per trillion (ppt) or better) to
halogen-containing compounds, including ozone-depleting substances (ODS),
and with appropriate modifications can be used to detect other molecules as
well. A few other GC instruments have been used for in situ measurements of
CFCs (Tyson et al., 1978; Kuster et al., 1981; Vedder et al., 1983; Bujok et al., 2001), and they can now be coupled
with mass spectrometric detection (e.g., Apel et al., 2015) as well. With
the advent of unmanned aircraft systems (UAS), the potential emerged to
extend scientific airborne missions to longer durations and other
experiments that were not possible with manned aircraft, as well as
eliminate some of the danger of flying piloted aircraft in remote regions.
Accordingly, the UAS Chromatograph for Atmospheric Trace Species (UCATS), a
smaller and lighter-weight version of previous aircraft instruments, was
designed and built to measure ODS and other trace gases on UAS missions.
These began in 2005 with the Altair UAS, a high-altitude version of the
General Atomics Predator B. Given the limited payload capacity of Altair,
small and lightweight ozone and water vapor sensors were installed inside
UCATS to generate a more complete data set. After two missions on Altair,
UCATS joined the payload of the National Science Foundation/National Center
for Atmospheric Research (NSF/NCAR) piloted Gulfstream V (GV) for the
START-08 (Stratosphere-Troposphere Analyses of Regional Transport 2008) and
HIPPO (HIAPER Pole-to-Pole Observations; 2009–2011) missions (Pan et al.,
2010; Wofsy, 2011), which included measurements from near the surface to the
lower stratosphere. In 2010, UCATS flew on the NASA Global Hawk UAS for the
Global Hawk Pacific (GloPac) demonstration project and participated in the
Airborne Tropical Tropopause Experiment (ATTREX; Jensen et al., 2013) from
2011 to 2014, to study dehydration, transport, and ozone chemistry in the
tropical tropopause layer (TTL). Most recently, UCATS completed the
Atmospheric Tomography Mission (ATom; 2016–2018), for which the NASA DC-8
aircraft sampled the remote atmosphere over the Atlantic, Pacific, and
Southern oceans and parts of the Arctic and Antarctic from near the surface
to above 12 km in different seasons. Many of these missions required changes
to UCATS, and components were also upgraded when possible. The end result is
a compact instrument for UAS and piloted aircraft, capable of measurements
of atmospheric composition, chemistry, and transport in the stratosphere and
troposphere. We describe the design and components of UCATS in Sect. 2,
focusing on ATom, the most recent mission for UCATS; improvements and
modifications over the course of its missions in Sect. 3; and data and
intercomparisons from some of the field campaigns in Sect. 4, with a short
summary including future plans in Sect. 5.</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Instrument design</title>
      <p id="d1e501">At its core, UCATS is similar to previous gas chromatograph (GC) instruments
designed and built for aircraft and balloon platforms (Elkins et al., 1996;
Romashkin et al., 2001; Moore et al., 2003). It combines a two-channel GC
that is a lighter and much more compact version of the four-channel ACATS-IV
(Airborne Chromatography for Atmospheric Trace Species IV; Elkins et al.,
1996) instrument and incorporates some of the advances in fast
chromatography from the LACE (Lightweight Airborne Chromatograph Experiment;
Moore et al., 2003) instrument for balloons, along with small ozone and
water vapor sensors. Figure 1 shows a block diagram of UCATS with all the
major internal components; more detailed drawings of the ozone and water
instruments are included in the Appendix (Fig. A1a and b). Each part of
UCATS is described in the following subsections.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><?xmltex \currentcnt{1}?><?xmltex \def\figurename{Figure}?><label>Figure 1</label><caption><p id="d1e506">Schematic of UCATS as flown in ATom showing all major
components. Red lines indicate the flow of ambient air through the
instrument, and blue lines indicate ECD dopant flow. All regulators (“Press
Reg”) are single stage and kept at a constant external pressure by a small
flow of carrier gas and a Tavco absolute pressure controller (green line,
top) to improve stability. Pressure is measured at points in the system
marked “P”, as well as at regulators and controllers. Green “crimped
lines” typically provide 5–10 cm<inline-formula><mml:math id="M8" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:math></inline-formula>/min purge flows to keep the ECDs and
TDL cell clean and dry when the instrument is powered off, make-up flows
to the ECDs when operating, and flows to pressurize the regulators. N<inline-formula><mml:math id="M9" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
carrier gas (green) is purified through a set of molecular sieve, Hopcalite,
and activated charcoal traps, as well as a hot zirconium getter, labeled as
“traps” in the figure, before being sent to the GCs. Bottles for N<inline-formula><mml:math id="M10" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
and calibrated air were located externally for ATom and prior missions; they
will be mounted inside the UCATS shell for the DCOTSS mission in 2021.
Internal details of the ozone and water instruments are shown in Fig. A1a
and b.</p></caption>
        <?xmltex \igopts{width=412.564961pt}?><graphic xlink:href="https://amt.copernicus.org/articles/14/6795/2021/amt-14-6795-2021-f01.png"/>

      </fig>

<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>Gas chromatographs</title>
      <p id="d1e549">Both GC channels use Valco 10- and 12-port two-position valves (VICI, Houston,
TX) to control flow switching and ECDs (Valco and Shimadzu) to detect
specific trace species with high precision, with added dopant gas as
needed (Phillips et al., 1979; Fehsenfeld et al., 1981). In its original
configuration, one channel used OV-101 in packed columns to separate and
measure CFC-12, halon-1211, and CFC-11 every 70 s, similar to the
Lightweight Airborne Chromatograph Experiment (LACE) (Moore et al., 2003).
After the initial Altair flights in 2005, these were replaced with Unibeads
(pre-column, <inline-formula><mml:math id="M11" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 1 m length) and molecular<?pagebreak page6797?> sieve 5A (main
column, 0.7 m) to measure molecular hydrogen (H<inline-formula><mml:math id="M12" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>), methane (CH<inline-formula><mml:math id="M13" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula>),
and carbon monoxide (CO) every 140 s. A tiny flow of nitrous oxide
(N<inline-formula><mml:math id="M14" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O) dopant (<inline-formula><mml:math id="M15" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 0.003 sccm) added to the ECD is required
for adequate sensitivity. Flows and column temperatures varied over
different missions; in ATom, with the chromatography optimized for both the
troposphere and stratosphere, at a temperature of 94 <inline-formula><mml:math id="M16" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C the
N<inline-formula><mml:math id="M17" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> carrier gas flow was 60 sccm, with 4 s of pre-emphasis at
100 sccm at the start of the injection, to rapidly bring the pre-column up
to the same pressure as the main column. The pre-column was back-flushed
after 25 s to remove any remaining compounds over the remainder of the
140 s time window.</p>
      <?pagebreak page6798?><p id="d1e612">The second channel uses a pre-column (0.6 m) and main column (1.8 m) of
Porapak Q, followed by a post-column of 5A molecular sieve (originally 0.20 m, now 0.25 m) to measure sulfur hexafluoride (SF<inline-formula><mml:math id="M18" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula>) and N<inline-formula><mml:math id="M19" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O every
70 s; doping the nitrogen carrier gas with CO<inline-formula><mml:math id="M20" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> enhances the ECD
response to N<inline-formula><mml:math id="M21" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O. The pre-columns and main columns were maintained at 91 <inline-formula><mml:math id="M22" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C and the post-column at <inline-formula><mml:math id="M23" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 120 <inline-formula><mml:math id="M24" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (for
the shorter version) and 190 <inline-formula><mml:math id="M25" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (longer version; changed in
2011). Carrier gas flows in ATom were 55 sccm, with the flow in the
pre-column reversed after 13–14 s. Since the backflush switches occur
early in the cycle, there is sufficient time for the pre-columns in each
channel to be cleaned out, even with lower flow rates compared to the main
flows. All the columns used were packed in 3.2 mm o.d. stainless-steel
tubing, wound around a circular mandrel with heater cartridges and a
resistance temperature detector (RTD), and packaged in insulated metal cans.
The ECDs were packaged in similar cans but sealed and supplied with a
<inline-formula><mml:math id="M26" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 5 sccm purge flow to prevent oxidation and maintained at
330 or 350 <inline-formula><mml:math id="M27" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C with Omega temperature controllers.</p>
      <p id="d1e702">Chromatograms are similar to those in Moore et al. (2003), Figs. 7c and 9.
ECDs provide very high sensitivity but can have non-linearity, particularly
for doped channels, where secondary ion–molecule reactions are used to
detect trace species. UCATS was calibrated on the ground during each
mission, with a set of standards spanning the range of expected atmospheric
concentrations (typically 30 %–100 % of those in background tropospheric
air) and occasionally including zero air to check baselines. From these
experiments, calibration curves for each molecule are calculated, including
an estimate of the error in the calibration. An example of a calibration
curve for N<inline-formula><mml:math id="M28" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O is included in the Appendix (Fig. A2); all other curves
were even closer to linear. In flight, a calibration standard from
compressed background tropospheric air is injected every 6–10 min, and
the peak heights of air samples and standards are analyzed with the
calibration curves to generate a time series of mixing ratios for each
molecule in sampled air.</p>
</sec>
<sec id="Ch1.S2.SS2">
  <label>2.2</label><title>Airflows and sampling</title>
      <p id="d1e723">Ambient air is drawn into UCATS from a side-facing or rear-facing inlet
extending 25–30 cm from the skin of the aircraft (outside the aircraft
boundary layer) through stainless-steel and Synflex tubing; sample flow
tubing inside UCATS is stainless steel. Air is pressurized in the GC sample
loops by an external two-stage KNF diaphragm pump (model UN726, with
Teflon-coated heads and diaphragms) and maintained at 1225 hPa with an
absolute pressure relief valve (Tavco, Inc.; Chatsworth, CA); excess air is
dumped through the Tavco overflow. Air flows at approximately 80 sccm
sequentially through the two sample loops (<inline-formula><mml:math id="M29" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 0.5 cc volume for
each channel) and a flow meter and is controlled by solenoid valves and a
pressure regulator set at 1080 hPa on the outlet. Every 70 or 140 s
the contents of the sample loops are injected by the two-position Valco valves
onto the pre-columns, providing a discontinuous <inline-formula><mml:math id="M30" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 2 s
snapshot measurement of ambient air.</p>
</sec>
<sec id="Ch1.S2.SS3">
  <label>2.3</label><title>Water vapor</title>
      <p id="d1e748">The sample airflow is split just upstream of the GC pump to feed a tunable
diode laser (TDL) hygrometer with its own pump (KNF, model NMP850)
downstream of the absorption cell. The original hygrometer, a custom
commercial sensor from MayComm, Inc., used infrared absorption at 1.37 <inline-formula><mml:math id="M31" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> with second harmonic detection to measure water vapor. Since water vapor
number densities span 5 orders of magnitude from the surface to the
stratosphere, the laser beam was split into two optical paths, a 13.4 cm
“short path” for measurements from the surface to the mid-troposphere
(40 000 to 500 parts per million (ppm)) and a 403 cm multi-pass “long
path” for measurements from the mid-troposphere into the stratosphere (1000
to <inline-formula><mml:math id="M32" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 5 ppm). On the Altair missions, with a minimal payload, a small
Vaisala probe was installed on the inlet for measurements of temperature,
pressure, and relative humidity. This was not used subsequently, as the
payloads on larger aircraft included dedicated instruments for
meteorological measurements.</p>
      <p id="d1e768">During ATom, the TDL hygrometer in UCATS was upgraded with a new model from
Port City Instruments (Reno, NV), the successor to MayComm. It is similar in
concept and uses a distributed feedback laser (DFB) to scan across two
closely spaced absorption lines near 2.574 <inline-formula><mml:math id="M33" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>. Absorption at this
wavelength is much stronger than in the original instrument, allowing higher
sensitivity in the stratosphere. As before, the laser beam is split into two
optical paths, with the short path (5.14 cm) for high values of tropospheric
water (<inline-formula><mml:math id="M34" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 2000–40 000 ppm) using direct absorption. The long
path (280.0 cm) is used with second harmonic detection for water vapor from
0–100 ppm, and intermediate values (100–5000 ppm) are measured using the
long path with direct absorption. A second weak absorption line is also
analyzed with direct absorption for water vapor mixing ratios above 1000 ppm; this is not being used at present. Both long- and short-path spectra are
recorded simultaneously, with each scan taking approximately 200 ms. All
four measurements of water vapor are calculated, and then each one is averaged
together for <inline-formula><mml:math id="M35" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 1 Hz output on a serial data line. All data are
recorded by the UCATS computer, and the appropriate value for display and
archiving is chosen based on the range of pressure and water vapor. Both
instruments required extensive calibration using prepared water vapor
standards and frost point hygrometers for accurate measurements. The new
instrument allows higher-precision (<inline-formula><mml:math id="M36" display="inline"><mml:mo lspace="0mm">±</mml:mo></mml:math></inline-formula>0.1 ppm) measurements of water
vapor in the stratosphere compared to the original instrument, which was
limited to <inline-formula><mml:math id="M37" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>1 ppm.</p>
</sec>
<sec id="Ch1.S2.SS4">
  <label>2.4</label><title>Ozone</title>
      <p id="d1e817">Ozone was measured by direct absorption (Beer–Lambert law) UV photometers
from 2B Technologies (Boulder, CO), modified for high-altitude operation and
mounted inside the UCATS package. The initial ozone instrument was a 2B
model 205; modifications included a stronger pump (KNF, model UNMP-830), a
small metal cylinder upstream of the pump to dampen pressure fluctuations
that could degrade the measurement precision, O<inline-formula><mml:math id="M38" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> scrubbers with
manganese dioxide (MnO<inline-formula><mml:math id="M39" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>)-coated screens (Thermo Fisher), and pressure
sensors with a range from 0 to over 1000 hPa (Honeywell ASDX series).
Ambient air was brought to the ozone instruments from the inlet through a
separate Teflon tube (6.35 mm o.d.), with the exhaust from the ozone and
water instruments combined inside UCATS and released outside the aircraft.
The model 205 is a dual-beam photometer, with the flow continuously split
between unscrubbed (ambient) air into one cell and scrubbed (ozone-free) air
into the other. Two<?pagebreak page6799?> photodiodes located at the end of 15 cm long absorption
cells measure the intensity of 254 nm radiation emitted from a mercury lamp.
Ozone concentrations are calculated from the ratio of measured intensities
through the cells with scrubbed and unscrubbed air according to the
Beer–Lambert law. The flow paths are switched by solenoids every 2 s,
to allow alternating measurements of ambient and scrubbed air in each cell,
with data averaged to 10 s on the original model. The instruments are
checked against a NIST-traceable calibration system (Thermo Fisher, model
49i) on the ground before and after every mission. For ATom, a new and more
sensitive 2B model 211 ozone photometer was added to UCATS in addition to
the original model 205, with similar modifications as before and additional
changes as described in Sect. 3.</p>
</sec>
<sec id="Ch1.S2.SS5">
  <label>2.5</label><title>Physical characteristics</title>
      <p id="d1e846">The overall dimensions of UCATS were initially <inline-formula><mml:math id="M40" display="inline"><mml:mrow><mml:mn mathvariant="normal">41</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">46</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">26</mml:mn></mml:mrow></mml:math></inline-formula> cm, with a
weight of 29 kg. To integrate the new water and ozone instruments for ATom,
an additional section was added to the top, increasing the height from 26 to
33 cm and the weight to 33 kg. The external GC pump weighs an additional 5 kg, and fiber-wrapped aluminum bottles (SCI Composites; now Worthington
Industries) for compressed nitrogen (N<inline-formula><mml:math id="M41" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>) carrier gas (model 687) and
dry, whole air calibration gas (model 209) for the GC, both filled to
<inline-formula><mml:math id="M42" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 13 000 kPa, together weigh approximately 7 kg. The total
N<inline-formula><mml:math id="M43" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> flow (carrier gas, backflush, purge flows) is about 300 sccm. The
N<inline-formula><mml:math id="M44" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> bottle needed to be filled every one or two flights, the calibration
gas was filled once per deployment, and the small dopant bottles could last
for over a year without refilling. For flights on passenger aircraft, such
as the DC-8 for ATom, the N<inline-formula><mml:math id="M45" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> and air bottles can be replaced by larger
gas cylinders as weight and space allow. UCATS is powered by 28 V DC, and
the complete package draws 12 A at startup (<inline-formula><mml:math id="M46" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 350 W),
decreasing to 150 W after the heaters warm up (<inline-formula><mml:math id="M47" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 30 min).
The majority of the power is consumed by the column and ECD heaters; the GC
pump and the TDL use about 1 A each, ozone less than 0.5 A, and other electronics about 1–2 A. Different voltages (<inline-formula><mml:math id="M48" display="inline"><mml:mo lspace="0mm">+</mml:mo></mml:math></inline-formula>5, <inline-formula><mml:math id="M49" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:math></inline-formula>, 15, and 24 V)
are supplied by Vicor DC–DC converters. The internal wiring in the ECD cans
is carefully adjusted to minimize electrical noise on the detector circuits;
no other electromagnetic compatibility issues were observed. UCATS is
controlled by an Ampro computer with the QNX operating system, and data are
stored on flash memory for post-flight processing; quick-look, near-real-time data for ozone, water, N<inline-formula><mml:math id="M50" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O, SF<inline-formula><mml:math id="M51" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula>, and CH<inline-formula><mml:math id="M52" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula> are also
provided by a serial or Ethernet connection to the aircraft, for onboard use
and telemetry to the ground. Data are analyzed post-flight with home-built
software, including GC peak integration and quantitation routines, primarily
using Igor software, and three separate data files (GC, ozone, and water,
with different time intervals) are generated for archiving and
dissemination.
<?xmltex \hack{\newpage}?></p>
</sec>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Field missions and modifications to UCATS</title>
      <p id="d1e978">Aircraft missions that included UCATS are summarized in Table 1 and
described in this section. The first two projects were designed to show that
high-quality measurements could be made on a UAS with autonomous
instruments. The NOAA/NASA UAS Demonstration Project using General Atomics'
Altair (Predator B-ER) UAS was conducted from Gray Butte, CA, during
April–May and November, 2005. UCATS measured N<inline-formula><mml:math id="M53" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O, SF<inline-formula><mml:math id="M54" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula>, CFC-11,
CFC-12, halon-1211, and ozone. More than 60 h of atmospheric composition data was acquired up to altitudes of 13 km, with the mission highlight an
18.4 h flight over the eastern Pacific Ocean, successfully demonstrating
that atmospheric composition and other environmental parameters can be
measured with high precision and accuracy from a UAS (Fahey et al., 2006).
The NASA/USDA-FS/NOAA Western States Fire Mission was conducted in August and
October 2006, again using Altair (Hinkley et al., 2009). The scientific
focus was on remote mapping of wildfires from a UAS, with UCATS on board to
measure atmospheric trace gases in fire plumes. At this point, the
halocarbon GC channel was reconfigured to measure the combustion products CO
and CH<inline-formula><mml:math id="M55" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula>, along with H<inline-formula><mml:math id="M56" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>, and a TDL water vapor sensor was added to
UCATS. Accomplishments of this project included 21 and 22 h science
flights and more than 65 h of UCATS in situ measurements of trace gases and
water vapor.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><?xmltex \currentcnt{1}?><label>Table 1</label><caption><p id="d1e1020">Missions and configurations of UCATS. A second 2B model 205 ozone
instrument was added for ATTREX-2 and 3. The water vapor instrument was
converted to the newer Port City model for ATom-2 and subsequent
deployments. For the DCOTSS mission (now scheduled to start in 2021), UCATS
is being repackaged to include three GC channels to measure CFCs (CFC-11,
CFC-12, and CFC-113) and H-1211, shorter-lived chlorine compounds
(CHCl<inline-formula><mml:math id="M57" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>, CCl<inline-formula><mml:math id="M58" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula>, and C<inline-formula><mml:math id="M59" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>HCl<inline-formula><mml:math id="M60" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>), and N<inline-formula><mml:math id="M61" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O and SF<inline-formula><mml:math id="M62" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula>.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="6">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:colspec colnum="5" colname="col5" align="left"/>
     <oasis:colspec colnum="6" colname="col6" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Mission</oasis:entry>
         <oasis:entry colname="col2">Year</oasis:entry>
         <oasis:entry colname="col3">Aircraft</oasis:entry>
         <oasis:entry colname="col4">GC configuration</oasis:entry>
         <oasis:entry colname="col5">Ozone</oasis:entry>
         <oasis:entry colname="col6">Water vapor</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">UAS Demo.</oasis:entry>
         <oasis:entry colname="col2">2005</oasis:entry>
         <oasis:entry colname="col3">Altair</oasis:entry>
         <oasis:entry colname="col4">CFCs; N<inline-formula><mml:math id="M63" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O <inline-formula><mml:math id="M64" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> SF<inline-formula><mml:math id="M65" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">2B 205</oasis:entry>
         <oasis:entry colname="col6">None</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Western States Fire Mission</oasis:entry>
         <oasis:entry colname="col2">2006</oasis:entry>
         <oasis:entry colname="col3">Altair</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M66" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mi mathvariant="normal">CO</mml:mi><mml:mo>/</mml:mo><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>; <inline-formula><mml:math id="M67" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mo>/</mml:mo><mml:msub><mml:mi mathvariant="normal">SF</mml:mi><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">2B 205</oasis:entry>
         <oasis:entry colname="col6">MayComm</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">START-08</oasis:entry>
         <oasis:entry colname="col2">2008</oasis:entry>
         <oasis:entry colname="col3">GV</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M68" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mi mathvariant="normal">CO</mml:mi><mml:mo>/</mml:mo><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>; <inline-formula><mml:math id="M69" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mo>/</mml:mo><mml:msub><mml:mi mathvariant="normal">SF</mml:mi><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">2B 205</oasis:entry>
         <oasis:entry colname="col6">MayComm</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">HIPPO</oasis:entry>
         <oasis:entry colname="col2">2009–2011</oasis:entry>
         <oasis:entry colname="col3">GV</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M70" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mi mathvariant="normal">CO</mml:mi><mml:mo>/</mml:mo><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>; <inline-formula><mml:math id="M71" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mo>/</mml:mo><mml:msub><mml:mi mathvariant="normal">SF</mml:mi><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">2B 205</oasis:entry>
         <oasis:entry colname="col6">MayComm</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">GloPac</oasis:entry>
         <oasis:entry colname="col2">2010</oasis:entry>
         <oasis:entry colname="col3">Global Hawk</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M72" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mi mathvariant="normal">CO</mml:mi><mml:mo>/</mml:mo><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>; <inline-formula><mml:math id="M73" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mo>/</mml:mo><mml:msub><mml:mi mathvariant="normal">SF</mml:mi><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">2B 205</oasis:entry>
         <oasis:entry colname="col6">MayComm</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ATTREX</oasis:entry>
         <oasis:entry colname="col2">2011–2015</oasis:entry>
         <oasis:entry colname="col3">Global Hawk</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M74" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mi mathvariant="normal">CO</mml:mi><mml:mo>/</mml:mo><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>; <inline-formula><mml:math id="M75" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mo>/</mml:mo><mml:msub><mml:mi mathvariant="normal">SF</mml:mi><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">2B 205 (2)</oasis:entry>
         <oasis:entry colname="col6">MayComm</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ATom</oasis:entry>
         <oasis:entry colname="col2">2016–2018</oasis:entry>
         <oasis:entry colname="col3">DC-8</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M76" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mi mathvariant="normal">CO</mml:mi><mml:mo>/</mml:mo><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>; <inline-formula><mml:math id="M77" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mo>/</mml:mo><mml:msub><mml:mi mathvariant="normal">SF</mml:mi><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">2B 211, 205</oasis:entry>
         <oasis:entry colname="col6">Port City</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">DCOTSS</oasis:entry>
         <oasis:entry colname="col2">2021–2022</oasis:entry>
         <oasis:entry colname="col3">ER-2</oasis:entry>
         <oasis:entry colname="col4">3 channels, see caption</oasis:entry>
         <oasis:entry colname="col5">2B 211</oasis:entry>
         <oasis:entry colname="col6">Port City</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <?pagebreak page6800?><p id="d1e1565">For START-08 (Pan et al., 2010) and HIPPO (Wofsy, 2011), both UCATS and the
PAN and Trace Hydrohalocarbon ExpeRiment (PANTHER), a four-channel GC with
ECD detection and a GC with mass spectrometry detection (GC/MS), were flown
on the NSF/NCAR GV aircraft. These were integrated together with a NOAA
whole air sampler (WAS) in collaboration with the University of Miami
(Schauffler et al., 1999). The larger GV payload was designed to probe
long-lived greenhouse gases and tracers of atmospheric transport. In HIPPO,
the GV flew repeated vertical profiles between 150 m above sea level and 14 km, largely over the Pacific Ocean, from northern Alaska and the Arctic
Ocean to south of New Zealand near Antarctica, with five deployments from
January 2009 to August 2011 covering different seasons. The first use of
UCATS in the extremely humid tropics during HIPPO revealed several issues,
which were resolved after the first two deployments. Initially, the GC
columns adsorbed water, which changed their retention characteristics. To
alleviate this, a Nafion dryer (Perma Pure, MD-050-72S-2) was added to
remove most of the moisture from the GC airflow prior to the sample loops,
with the exhaust from the pre-columns used as the dry counterflow gas. The
Nafion dryer helped considerably, but retention times and sensitivity for
the N<inline-formula><mml:math id="M78" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O <inline-formula><mml:math id="M79" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> SF<inline-formula><mml:math id="M80" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> channel still showed changes after passing through
very humid air; likely the Nafion dryer could not remove all the water
vapor. As described in Moore et al. (2003), we use Porapak Q columns to
separate N<inline-formula><mml:math id="M81" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O and SF<inline-formula><mml:math id="M82" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> from the large O<inline-formula><mml:math id="M83" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> peak. This is followed
by a short post-column of 5A molecular sieve, which partially retains the
N<inline-formula><mml:math id="M84" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O but not SF<inline-formula><mml:math id="M85" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula>, allowing the two peaks to be separated. The
molecular sieves have a very high affinity to water vapor, and absorbed
water changes the retention characteristics and peak height for N<inline-formula><mml:math id="M86" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O.
This problem was finally resolved by lengthening the 5A molecular sieve
post-column from <inline-formula><mml:math id="M87" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 20 to 25 cm. This allowed the post-column
to be operated at 190 <inline-formula><mml:math id="M88" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C instead of 115–120 <inline-formula><mml:math id="M89" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, with
N<inline-formula><mml:math id="M90" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O still completely eluting within 70 s after sample injection.
Water does not accumulate in the post-column at the higher temperatures, and
retention times and other aspects of the chromatography remained constant.
The N<inline-formula><mml:math id="M91" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O peak also became much sharper and higher, improving the
resolution of SF<inline-formula><mml:math id="M92" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> and N<inline-formula><mml:math id="M93" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O. This required changes to the
electrometer circuit that processes the ECD signal, in order to achieve a
faster response time and avoid saturation of the signal. These were
completed in 2015, prior to ATom. Plots illustrating data
quality and intercomparisons are shown in Sect. 4.</p>
      <p id="d1e1711">Problems were also identified with the 2B ozone instrument during the
START-08 and HIPPO missions related to changing humidity. UV ozone
photometers are known to suffer from offsets when transitioning between wet
and dry conditions (Wilson and Birks, 2006), because of water being retained
in the scrubber and slowly released, differentially affecting reflectance
from the walls of the cell with scrubbed air compared to the cell with
ambient air. This was resolved for ATom, as described later in
this section.</p>
      <p id="d1e1714">From 2010 to 2014, UCATS was integrated into a compartment in the fuselage
of the Global Hawk UAS for the GloPac and ATTREX missions (Jensen et al.,
2013). The Global Hawk generally operates in the stratosphere and upper
troposphere (12–20 km), where air is very dry. However, these missions led
to other changes in order to improve the data quality for ozone. The
original 2B model 205 could achieve a precision of <inline-formula><mml:math id="M94" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> % <inline-formula><mml:math id="M95" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 1 part
per billion (ppb) with 10 s averaging at atmospheric pressure. Because
Beer–Lambert absorption is really a measurement of number density
(concentration) of the absorbing molecule, the precision varies inversely
with pressure (1 ppb precision at 1000 hPa corresponds to a precision of 10 ppb at 100 hPa, a typical pressure in the upper troposphere and lower
stratosphere, UTLS). This is more than adequate
for midlatitude and polar stratospheric missions such as GloPac, where ozone
varies from a few hundred to a few thousand parts per billion. But for ATTREX, where the
focus was the tropical tropopause layer (TTL; Fueglistaler et al., 2009),
ozone was typically less than 100 ppb at pressures of 150–70 hPa. To
partially address this issue in ATTREX-2 and 3 (2013–2014), a second model 205
sensor was added to UCATS. The original model 205 remained completely
enclosed, and the new one was added to the front panel, with part of the
instrument inside the sheet metal UCATS enclosure and the cell, lamp, and
detectors on the surface, with a small insulated cover and warm airflow from
UCATS passing through it. In general, the older 2B had better stability over
a flight, possibly because of the more constant temperature environment
inside UCATS. However, after a few hours of operation (always the case with
Global Hawk flights, which could last for <inline-formula><mml:math id="M96" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 24 h with the
ATTREX payload), both instruments converged to stable and consistent
readings. When both instruments were operating normally, data from the two
instruments were merged and averaged to create a combined data set with a
value reported every 5 s. By averaging the data to longer times
(typically 10 s), the precision of the measurements could be improved.
UCATS served as the primary ozone instrument during ATTREX-3, where weight
and balance issues with the payload prevented the NOAA CSL instrument from
being flown on the Global Hawk.</p>
      <p id="d1e1741">ATom was similar to HIPPO, but with a much larger payload to map
out and study atmospheric chemistry as well as long-lived gases over remote
regions. For ATom, a new 2B model 211 ozone photometer was added to UCATS
and the partially external model 205 removed. The model 211 is similar in
principle but has a longer cell and path length (30 cm compared to 15 cm
for the model 205), improved electronics, and built-in flow meters to assure
equal flows through each cell, with a stated precision that is the sum of
1 % <inline-formula><mml:math id="M97" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.5 ppb over a 10 s average at 1000 hPa. As purchased, it
used photolysis of N<inline-formula><mml:math id="M98" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O to produce NO as the ozone scrubber; this<?pagebreak page6801?> method
is not affected by changes in humidity of the sampled air. However, at high
altitudes, with fixed addition of N<inline-formula><mml:math id="M99" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O (or NO), the rate of the chemical
reaction (NO <inline-formula><mml:math id="M100" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> O<inline-formula><mml:math id="M101" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mo>→</mml:mo></mml:mrow></mml:math></inline-formula> NO<inline-formula><mml:math id="M102" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>+</mml:mo></mml:mrow></mml:math></inline-formula> O<inline-formula><mml:math id="M103" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>) that removes ozone
decreases with decreasing pressure. Rather than trying to add more NO to
compensate (carrying toxic gases like NO on an aircraft is problematic; even
large amounts of an oxidizer such as N<inline-formula><mml:math id="M104" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O add to the complexity of
getting a payload certified), we used MnO<inline-formula><mml:math id="M105" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>-coated screens as the
scrubber and passed both the scrubbed and ambient airflows through Nafion
moisture exchangers provided with the instrument. Moisture exchangers have
been shown to eliminate the artifacts associated with rapid changes in water
vapor by keeping both cells at a constant humidity (Wilson and Birks, 2006).
They were not used for HIPPO and START-08, because the pressure of the gas
flow being analyzed varied from <inline-formula><mml:math id="M106" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 100 to 1000 hPa while the
cabin pressure is maintained near 900 hPa at high altitudes. With a pressure
differential of over 700 hPa, the soft Nafion tubes could leak or collapse
and block the flow. We solved this potential problem in ATom by placing the
Nafion tubes in a small aluminum box (McMaster-Carr, 75895K series), sealed
to the outside except for a small flow (50–200 sccm) of moist air (cabin air
passed through a short piece of 12.7 mm o.d. tube containing wet cotton)
through the box and into the exhaust line from the ozone instrument. Thus,
the pressure inside and outside the Nafion tubes stayed approximately equal.
This setup adds moisture to dry air samples, and may actually remove some
water from the very wettest samples (such as the tropical marine boundary
layer, where the water content can exceed 3 %), and generally keeps the
humidity in the ozone instrument constant or at least the same in both the
scrubbed and unscrubbed flows. This simple solution eliminated the effects
of rapid changes in humidity, as demonstrated by comparisons with another
ozone instrument (see Figs. 9 and 10 below).</p>
      <p id="d1e1835">The new ozone and water instruments were larger than the original models
and could not fit into the existing UCATS shell. A 7.5 cm extension was
added to the top of UCATS, with the new water and ozone instruments and main
cooling fans secured to the top plate. The original 2B model 205 ozone
instrument was left on the side to enable a comparison of results and to
provide a known and reproducible pressure measurement when needed. The total
weight increase was about 5 kg, but this is negligible on an aircraft with
the size and capacity of the DC-8. Starting in 2019, an additional
repackaging and upgrade of UCATS has been carried out for flights on the
ER-2 aircraft; this is described in Sect. 5.</p>
</sec>
<sec id="Ch1.S4">
  <label>4</label><title>Data intercomparisons and discussion</title>
      <p id="d1e1846">In this section, we present results in the stratosphere first and then in the
troposphere. To compare with UCATS, we used data from several other
instruments. On the GV, the quantum cascade laser spectrometer (QCLS;
Santoni et al., 2014) measured long-lived trace gases, including N<inline-formula><mml:math id="M107" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O
and CH<inline-formula><mml:math id="M108" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula>, with high precision and 1 s time resolution, ideal for
comparing time series and tracer–tracer correlation plots. The PANTHER
instrument (a four-channel GC, with a separate GC/mass spectrometer) also
measured the same molecules by GC as UCATS, using similar techniques. Whole
air samples were collected in glass flasks using programmable flask package
units (PFPs), which could be filled on demand or in a preset sequence, with
24 samples typically collected per flight. Samples were later analyzed at
the NOAA Global Monitoring Laboratory for a large set of trace gases
(Sweeney et al., 2015). All these instruments were also on the DC-8 aircraft
for ATom. Data from the Airborne Chromatograph for Atmospheric
Trace Species (ACATS; Elkins et al., 1996), a predecessor of both PANTHER
and UCATS, are also used from the 1997 Photochemistry of Ozone Loss in the
Arctic Region in Summer (POLARIS) mission for reference.</p>
      <p id="d1e1867">The NOAA Chemical Sciences Laboratory (CSL) classic ozone instrument
(Proffitt and McLaughlin, 1983) has a long history of measurements on high-altitude aircraft and flew on the GV during HIPPO. This was replaced with a
new lighter version, NOAA-2 (Gao et al., 2012), for Global Hawk missions.
A different group from NOAA CSL flew a chemiluminescence (CL) instrument
on the DC-8 in ATom for measurements of ozone (Bourgeois et al., 2020), NO,
NO<inline-formula><mml:math id="M109" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>, and total reactive nitrogen (NO<inline-formula><mml:math id="M110" display="inline"><mml:msub><mml:mi/><mml:mi>y</mml:mi></mml:msub></mml:math></inline-formula>). Ozone data from concurrent
GML sonde launches (Komhyr et al., 1995) and the NCAR chemiluminescence
instrument (Ridley et al., 1992), on the GV during the Convective Transport
of Active Species in the Tropics (CONTRAST) mission, were also used for
ATTREX data comparisons and analysis.</p>
      <p id="d1e1888">The diode laser hygrometer (DLH; Diskin et al., 2002; Podolske et al.,
2003), an open-path near-infrared absorption instrument, whose optical path
is defined by a transceiver in the fuselage and a retroreflector mounted
below one of the wings, was used to measure water vapor on the Global Hawk
and DC-8. During ATTREX, the NOAA CSL TDL hygrometer (also from Port City
Instruments) measured water vapor as well. The Meteorological Measurement
System (MMS; Scott et al., 1990) was used on the Global Hawk and DC-8
missions for position and meteorological variables.</p>
<sec id="Ch1.S4.SS1">
  <label>4.1</label><title>Gas chromatographs</title>
      <?pagebreak page6802?><p id="d1e1898">Global Hawk flights during the GloPac mission covered a wide range of air
masses in the stratosphere and provided an opportunity to demonstrate the
capabilities of UCATS in the environment for which it was designed. Figure 2
shows a scatter plot of SF<inline-formula><mml:math id="M111" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> vs. N<inline-formula><mml:math id="M112" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O mole fractions for the flight
of 23 April 2010 from Edwards  Air Force Base, CA, to the western Arctic Ocean and back
(<inline-formula><mml:math id="M113" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 35–85<inline-formula><mml:math id="M114" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, 120–165<inline-formula><mml:math id="M115" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W) at altitudes
from 16 to 20 km, with two profiles down to 13 km and back. N<inline-formula><mml:math id="M116" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O and
SF<inline-formula><mml:math id="M117" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> are long-lived greenhouse gases emitted at Earth's surface and
generally decline with altitude in the stratosphere (e.g., Plumb and Ko,
1992). For N<inline-formula><mml:math id="M118" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O this is primarily due to photochemical loss in the
stratosphere, and for SF<inline-formula><mml:math id="M119" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> it is because older air entered the
stratosphere at earlier times, when tropospheric SF<inline-formula><mml:math id="M120" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> mixing ratios were
lower (Hall et al., 2011). As a result, N<inline-formula><mml:math id="M121" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O and SF<inline-formula><mml:math id="M122" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> are correlated
in the stratosphere, with older air and air from higher altitudes having the
lowest mixing ratios for both gases. This correlation can be seen in Fig. 2,
where N<inline-formula><mml:math id="M123" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O declines strongly from its tropospheric value
(<inline-formula><mml:math id="M124" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 320 ppb in 2010) as SF<inline-formula><mml:math id="M125" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> (tropospheric value
<inline-formula><mml:math id="M126" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 7 ppt in 2010) approaches 5.5 ppt. Data from ACATS-IV taken
on the ER-2 aircraft almost 13 years earlier in the Arctic during the 1997
POLARIS mission are shown with the GloPac data for reference. POLARIS
N<inline-formula><mml:math id="M127" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O and SF<inline-formula><mml:math id="M128" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> mixing ratios were adjusted upward for the
tropospheric growth over the 13 years between missions (N<inline-formula><mml:math id="M129" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O increased
from 312.5 to 322.9 ppb and SF<inline-formula><mml:math id="M130" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> from 3.9 to 7.0 ppt) by adding the
difference in SF<inline-formula><mml:math id="M131" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> tropospheric values to the POLARIS data and
multiplying the ratio of tropospheric values to the POLARIS data for
N<inline-formula><mml:math id="M132" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O and other tracers that are photochemically destroyed in the
stratosphere. This is mainly to bring the two data sets onto the same scale
for easy visualization, though the similarity does reflect the relatively
stable nature of stratospheric circulation and photochemistry. Average
tropospheric values of these long-lived greenhouse gases were taken from the
NOAA GML network (<uri>http://www.esrl.noaa.gov/gmd/ccgg/trends/global.html</uri>, last access: 29 September 2021). The
measurement precision for UCATS is about <inline-formula><mml:math id="M133" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>0.05 ppt SF<inline-formula><mml:math id="M134" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> (1<inline-formula><mml:math id="M135" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>) and <inline-formula><mml:math id="M136" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>1.5 ppb N<inline-formula><mml:math id="M137" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O, similar to ACATS but with a data
rate of every 70 s instead of 360 s. The slightly more gradual
slope for POLARIS data is due to the fact that SF<inline-formula><mml:math id="M138" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> was increasing more
slowly in the 1990s than in the years just before GloPac (Hall et al.,
2011) and perhaps other more subtle differences in the trends. Similar
plots of GloPac and (adjusted) POLARIS CH<inline-formula><mml:math id="M139" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula> vs. N<inline-formula><mml:math id="M140" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O and H<inline-formula><mml:math id="M141" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> vs.
CH<inline-formula><mml:math id="M142" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula> data from the same flights (Fig. 3) show close correspondence
between the two campaigns and tight, nearly linear correlations, as expected
from the fact that these are all long-lived gases in the stratosphere.
Overall, UCATS precision for CH<inline-formula><mml:math id="M143" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula> and H<inline-formula><mml:math id="M144" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> was <inline-formula><mml:math id="M145" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>7–8 ppb
(0.5 %) and <inline-formula><mml:math id="M146" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>5 ppb (1 %) respectively, equal to or slightly
better than that of ACATS-IV and with a slightly faster data rate.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2"><?xmltex \currentcnt{2}?><?xmltex \def\figurename{Figure}?><label>Figure 2</label><caption><p id="d1e2220">UCATS SF<inline-formula><mml:math id="M147" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> plotted vs. N<inline-formula><mml:math id="M148" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O from the GloPac mission (red
circles), with similar data from ACATS (black squares) during the POLARIS
mission 13 years earlier. The POLARIS data have been adjusted for the
tropospheric increases in both gases between 1997 and 2010 (see text).</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://amt.copernicus.org/articles/14/6795/2021/amt-14-6795-2021-f02.png"/>

        </fig>

      <p id="d1e2247">The START-08 and HIPPO missions were the first tropospheric campaigns for
UCATS. On 12 January 2009, during the first HIPPO deployment, the GV
sampled air in both the troposphere and stratosphere as it traveled from
Anchorage, AK, north to near 80<inline-formula><mml:math id="M149" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N over the Arctic Ocean and
back. The precision for UCATS N<inline-formula><mml:math id="M150" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O during most of the flight was near
<inline-formula><mml:math id="M151" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>1 ppb in both the troposphere and stratosphere, calculated from
flight segments with near-constant N<inline-formula><mml:math id="M152" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O near the start of the flight
and comparisons with QCLS and PFP samples throughout the flight (Fig. 4a). A
more quantitative comparison can be made by plotting UCATS and PFP data for
the entire HIPPO 1 deployment against the higher-time-resolution QCLS data
(Fig. 4b). Each UCATS GC measurement is a roughly 2 s average of the
atmospheric composition along the flight path a few seconds before the air
sample is injected and is plotted here against the corresponding 10 s
average of QCLS data. Each PFP flask takes between 30 s and a few
minutes to fill, depending on altitude, and a comparison with QCLS data is
enabled by averaging the QCLS data over the sampling interval associated
with each flask sample. QCLS data have been corrected here for the
approximately 1 ppb offset with respect to the PFPs reported by Santoni et
al. (2014) during HIPPO in 2009–2011. The UCATS vs. QCLS correlation allows
an upper limit estimate of UCATS precision, assuming all the error is
associated with the UCATS measurements, none from QCLS, and that effects
related to atmospheric variability arising from timing mismatches are
negligible. The resulting standard deviation (1<inline-formula><mml:math id="M153" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula> precision) is
<inline-formula><mml:math id="M154" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>1–2 ppb over the entire month of HIPPO flights, from the high Arctic
through the tropics to the Southern Ocean and back. The slope of the fit is
0.91 <inline-formula><mml:math id="M155" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.004; this difference has not been resolved. We note that the
slope for the PFP data is 0.93 <inline-formula><mml:math id="M156" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.02, though this is partially driven
by the smaller slope for tropospheric (high N<inline-formula><mml:math id="M157" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O) data, as opposed to
for UCATS, where the slope is also smaller in the troposphere but clearly
reflects differences in the stratosphere (low N<inline-formula><mml:math id="M158" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O), where the dynamic
range of N<inline-formula><mml:math id="M159" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O is large. The UCATS and PFP results agree closely over the
more limited range of PFP N<inline-formula><mml:math id="M160" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O data, but because the measurements were
not simultaneous, a quantitative comparison is not possible.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3"><?xmltex \currentcnt{3}?><?xmltex \def\figurename{Figure}?><label>Figure 3</label><caption><p id="d1e2353">Similar correlation plots to Fig. 2, showing CH<inline-formula><mml:math id="M161" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula> vs.
N<inline-formula><mml:math id="M162" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O <bold>(a)</bold> and H<inline-formula><mml:math id="M163" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> vs. CH<inline-formula><mml:math id="M164" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula> <bold>(b)</bold>. Molecular hydrogen increases
slightly in the stratosphere from CH<inline-formula><mml:math id="M165" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula> photooxidation, leading to their
anticorrelation.</p></caption>
          <?xmltex \igopts{width=213.395669pt}?><graphic xlink:href="https://amt.copernicus.org/articles/14/6795/2021/amt-14-6795-2021-f03.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4"><?xmltex \currentcnt{4}?><?xmltex \def\figurename{Figure}?><label>Figure 4</label><caption><p id="d1e2416">N<inline-formula><mml:math id="M166" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O data from the HIPPO mission on the GV aircraft. Panel <bold>(a)</bold>
shows the time series from a flight north from Anchorage, AK, over the Arctic
Ocean and back. The aircraft flew several profiles from 14 km to near the
surface during the flight. Panel <bold>(b)</bold> shows UCATS and PFP data plotted
against QCLS data over the entire deployment.</p></caption>
          <?xmltex \igopts{width=199.169291pt}?><graphic xlink:href="https://amt.copernicus.org/articles/14/6795/2021/amt-14-6795-2021-f04.png"/>

        </fig>

      <p id="d1e2440">In ATom, with the GC system optimized for all conditions, UCATS produced
precise and accurate data in the troposphere with both short- and long-term
stability and without degradation in the humid tropics. This is demonstrated
by N<inline-formula><mml:math id="M167" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O and SF<inline-formula><mml:math id="M168" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> time series for the DC-8 flight of 29 January 2017, from Palmdale, CA, to northern Alaska and back to Anchorage
(<inline-formula><mml:math id="M169" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 35–70<inline-formula><mml:math id="M170" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, 120–155<inline-formula><mml:math id="M171" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W), and scatter
plots for the entire ATom-2 deployment (Fig. 5). Data from UCATS, PANTHER,
QCLS (N<inline-formula><mml:math id="M172" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O only), and PFPs show<?pagebreak page6803?> excellent agreement for the time series
(mean differences typically <inline-formula><mml:math id="M173" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>1–2 ppb N<inline-formula><mml:math id="M174" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O and <inline-formula><mml:math id="M175" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>0.05 ppt
SF<inline-formula><mml:math id="M176" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula>). ATom QCLS N<inline-formula><mml:math id="M177" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O data show a similar offset relative to PFPs
(taken as the reference instrument on board) as observed during HIPPO,
attributed to the QCLS calibration procedure. As in Gonzalez et al. (2021),
QCLS N<inline-formula><mml:math id="M178" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O data are corrected by subtracting the offset with respect to
the PFP data (<inline-formula><mml:math id="M179" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 1.2 ppb). The 1<inline-formula><mml:math id="M180" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula> precision of UCATS
and PANTHER was <inline-formula><mml:math id="M181" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M182" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>1 ppb N<inline-formula><mml:math id="M183" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O and <inline-formula><mml:math id="M184" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>0.05 ppt
SF<inline-formula><mml:math id="M185" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> from both the time series and the scatter plots (again assuming all
the variability in the comparison with QCLS is associated with the GC data).
As described above, SF<inline-formula><mml:math id="M186" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> and N<inline-formula><mml:math id="M187" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O are well correlated in the
stratosphere, and the precision of SF<inline-formula><mml:math id="M188" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> from the lower right panel can
be estimated for stratospheric data (lower values of both gases). In the
troposphere, the plot reflects the strong latitudinal gradient in SF<inline-formula><mml:math id="M189" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula>,
with lower SF<inline-formula><mml:math id="M190" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> in the Southern Hemisphere and higher SF<inline-formula><mml:math id="M191" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> in the
Northern Hemisphere. This leads to a much steeper apparent slope, since
N<inline-formula><mml:math id="M192" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O also has a latitudinal gradient, but weaker, also with lower values
in the Southern Hemisphere. Transitions between the troposphere and the
stratosphere lead to mixing lines between the two branches (from
<inline-formula><mml:math id="M193" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 310–330 ppb N<inline-formula><mml:math id="M194" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O). The only disagreement for N<inline-formula><mml:math id="M195" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O is
at low values, where PANTHER and UCATS both measure about 3 ppb lower than
the QCLS instrument, a deviation in the opposite direction compared to
HIPPO. The tropical flight of 3 February 2017 (Fig. A3) illustrates the
precision of N<inline-formula><mml:math id="M196" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O and SF<inline-formula><mml:math id="M197" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> where air masses sampled along the flight
track varied slowly (because of its altitude range, the DC-8 is always in
the troposphere at these latitudes). H<inline-formula><mml:math id="M198" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> measurements also showed good
agreement between UCATS, PANTHER, and PFPs (Fig. 6), with nearby data points
from the different instruments typically differing by about <inline-formula><mml:math id="M199" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>5 ppb
(1 %) over the entire range of observed values. Values for precision and
agreement of measurements from ATom and other missions are summarized in
Table 2.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5" specific-use="star"><?xmltex \currentcnt{5}?><?xmltex \def\figurename{Figure}?><label>Figure 5</label><caption><p id="d1e2727">N<inline-formula><mml:math id="M200" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O and SF<inline-formula><mml:math id="M201" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> time series for one flight <bold>(a, c)</bold> and
scatter plots for all the NOAA instruments against QCLS N<inline-formula><mml:math id="M202" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O data from
the entire ATom-2 deployment. The flights, from  26 January to
21 February 2017, spanned the Pacific, Atlantic, and Southern oceans and
the Arctic. With improvements to the <inline-formula><mml:math id="M203" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mo>/</mml:mo><mml:msub><mml:mi mathvariant="normal">SF</mml:mi><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> channel, UCATS was
able to achieve similar precision to the HIPPO-1 data shown in Fig. 4 but
without the instability driven by accumulated water in the GC columns.
N<inline-formula><mml:math id="M204" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O and SF<inline-formula><mml:math id="M205" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> do not have a simple relationship in the troposphere,
so the panel on the lower right does not yield a single curve as in Fig. 2.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://amt.copernicus.org/articles/14/6795/2021/amt-14-6795-2021-f05.png"/>

        </fig>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2" specific-use="star"><?xmltex \currentcnt{2}?><label>Table 2</label><caption><p id="d1e2809">Precision of UCATS measurements for selected missions, level of
agreement with other instruments on the same platform, and comparison of
lower tropospheric values of long-lived gases with the NOAA surface network.
The NOAA surface network of flask collection sites allows the airborne
measurements to be tied to a global system with calibration scales for all
the gases measured by GC. The NOAA airborne instruments use standards from
the same laboratory as the surface network, as well as the same scales. CO
is not included because it was usually measured by other instruments and
has an artifact in the stratosphere at high ozone levels. In the troposphere
the precision for CO was typically 5–10 ppb. The main sink of H<inline-formula><mml:math id="M206" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> is at
the surface and it has the most variability there, so we do not compare it
with the surface network. Not all deployments and measurements achieved the
same level of precision as shown here. This table applies to HIPPO 1 for
long-lived gases; GloPac and ATTREX-2 and 3 for N<inline-formula><mml:math id="M207" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O and SF<inline-formula><mml:math id="M208" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula>; and
ATom-2, 3, and 4 for all species measured by UCATS.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="6">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:colspec colnum="5" colname="col5" align="left"/>
     <oasis:colspec colnum="6" colname="col6" align="left"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Mission</oasis:entry>
         <oasis:entry colname="col2">Year</oasis:entry>
         <oasis:entry colname="col3">Molecule</oasis:entry>
         <oasis:entry colname="col4">Precision</oasis:entry>
         <oasis:entry colname="col5">Agreement with</oasis:entry>
         <oasis:entry colname="col6">Agreement with</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">onboard instruments</oasis:entry>
         <oasis:entry colname="col6">surface network</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">HIPPO</oasis:entry>
         <oasis:entry colname="col2">2009–2011</oasis:entry>
         <oasis:entry colname="col3">N<inline-formula><mml:math id="M218" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O</oasis:entry>
         <oasis:entry colname="col4">1.5 ppb</oasis:entry>
         <oasis:entry colname="col5">2 ppb<inline-formula><mml:math id="M219" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">1 ppb</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">SF<inline-formula><mml:math id="M220" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">0.05 ppt</oasis:entry>
         <oasis:entry colname="col5">0.05 ppt</oasis:entry>
         <oasis:entry colname="col6">0.03 ppt</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">CH<inline-formula><mml:math id="M221" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">15 ppb</oasis:entry>
         <oasis:entry colname="col5">10 ppb</oasis:entry>
         <oasis:entry colname="col6">15 ppb</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">H<inline-formula><mml:math id="M222" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">5 ppb</oasis:entry>
         <oasis:entry colname="col5">5 ppb</oasis:entry>
         <oasis:entry colname="col6">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">O<inline-formula><mml:math id="M223" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">9 ppb</oasis:entry>
         <oasis:entry colname="col5">3 ppb</oasis:entry>
         <oasis:entry colname="col6">–</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">H<inline-formula><mml:math id="M224" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O</oasis:entry>
         <oasis:entry colname="col4">1 ppm<inline-formula><mml:math id="M225" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">5 %</oasis:entry>
         <oasis:entry colname="col6">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">GloPac and</oasis:entry>
         <oasis:entry colname="col2">2010</oasis:entry>
         <oasis:entry colname="col3">N<inline-formula><mml:math id="M226" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O</oasis:entry>
         <oasis:entry colname="col4">1 ppb</oasis:entry>
         <oasis:entry colname="col5">–</oasis:entry>
         <oasis:entry colname="col6">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ATTREX</oasis:entry>
         <oasis:entry colname="col2">2011–2015</oasis:entry>
         <oasis:entry colname="col3">SF<inline-formula><mml:math id="M227" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">0.04 ppt</oasis:entry>
         <oasis:entry colname="col5">–</oasis:entry>
         <oasis:entry colname="col6">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">CH<inline-formula><mml:math id="M228" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">7.5 ppb</oasis:entry>
         <oasis:entry colname="col5">5 ppb</oasis:entry>
         <oasis:entry colname="col6">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">H<inline-formula><mml:math id="M229" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">5 ppb</oasis:entry>
         <oasis:entry colname="col5">–</oasis:entry>
         <oasis:entry colname="col6">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">O<inline-formula><mml:math id="M230" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">5–10 ppb<inline-formula><mml:math id="M231" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">c</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">1 % or 2 ppb<inline-formula><mml:math id="M232" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">c</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">–</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">H<inline-formula><mml:math id="M233" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O</oasis:entry>
         <oasis:entry colname="col4">1 ppm</oasis:entry>
         <oasis:entry colname="col5">5 %</oasis:entry>
         <oasis:entry colname="col6">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ATom</oasis:entry>
         <oasis:entry colname="col2">2016–2018</oasis:entry>
         <oasis:entry colname="col3">N2O</oasis:entry>
         <oasis:entry colname="col4">1 ppb</oasis:entry>
         <oasis:entry colname="col5">1.5 ppb</oasis:entry>
         <oasis:entry colname="col6">0.8 ppb</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">SF<inline-formula><mml:math id="M234" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">0.05 ppt</oasis:entry>
         <oasis:entry colname="col5">0.05 ppt</oasis:entry>
         <oasis:entry colname="col6">0.04 ppt</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">CH<inline-formula><mml:math id="M235" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">15 ppb</oasis:entry>
         <oasis:entry colname="col5">5 ppb</oasis:entry>
         <oasis:entry colname="col6">10 ppb</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">H<inline-formula><mml:math id="M236" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">5 ppb</oasis:entry>
         <oasis:entry colname="col5">5 ppb</oasis:entry>
         <oasis:entry colname="col6">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">O<inline-formula><mml:math id="M237" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">2–3 ppb</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M238" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 1 ppb</oasis:entry>
         <oasis:entry colname="col6">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">H<inline-formula><mml:math id="M239" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O</oasis:entry>
         <oasis:entry colname="col4">0.1 ppm</oasis:entry>
         <oasis:entry colname="col5">in process</oasis:entry>
         <oasis:entry colname="col6">–</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e2839"><inline-formula><mml:math id="M209" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula> For these measurements, UCATS agreed to 1–2 ppb with PFP whole air
samples; we consider these to be the most precise and accurate measurements
of N<inline-formula><mml:math id="M210" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O. Agreement with QCLS in the troposphere was also 1–2 ppb but
diverged for N<inline-formula><mml:math id="M211" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O <inline-formula><mml:math id="M212" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 300 ppb, with differences up to 4 ppb. The
goal of HIPPO was to quantify long-lived tracers and other greenhouse gases
in the troposphere, with less emphasis on the stratosphere. Because UCATS is
calibrated with a range of standards from 160–322 ppb in HIPPO, we are
confident in our measurements throughout the stratosphere, though these
calibrations are performed on the ground and only one standard (with mixing
ratios close to the background troposphere) is used in flight.
<inline-formula><mml:math id="M213" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula> Precision for water vapor is best expressed as a percentage in the
troposphere (high water vapor) and an absolute number in the stratosphere
(low water). The precision here is given for the lowest water vapor values
in the stratosphere, 1 ppm for the original MayComm instrument and 0.1 ppm
for the newer Port City instrument. The precision in the troposphere was
always 5 % or better. Calibration and comparison of the Port City
instrument are still ongoing.
<inline-formula><mml:math id="M214" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">c</mml:mi></mml:msup></mml:math></inline-formula> The precision and agreement for ozone are best expressed in parts per billion at low
mixing ratios and as a percentage at high mixing ratios. For example, in
ATTREX and GloPac, where ozone ranged from less than 20 to over 2000 ppb, the average agreement with the CSL instrument was better than 1 ppb for
ozone <inline-formula><mml:math id="M215" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 200 ppb, with a precision better than 10 ppb, and for ozone
<inline-formula><mml:math id="M216" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 500 ppb, the average agreement was better than 1 %, with a
precision of 2 %–3 %. Values for ATom are for tropospheric data
(O<inline-formula><mml:math id="M217" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">100</mml:mn></mml:mrow></mml:math></inline-formula> ppb), since the focus of ATom was on tropospheric
chemistry.</p></table-wrap-foot></table-wrap>

</sec>
<sec id="Ch1.S4.SS2">
  <label>4.2</label><title>Ozone – stratosphere</title>
      <p id="d1e3545">This section is primarily focused on the ATTREX mission, which was designed
to probe the chemical composition of air over the tropical Pacific and
transport into the stratosphere but applies to all UCATS stratospheric
data. Because ozone mixing ratios peak in the stratosphere, the main
requirements for a stratospheric ozone measurement are accuracy and
stability, with sensitivity to low values usually<?pagebreak page6804?> less critical. In GloPac,
the 2B model 205 in UCATS agreed within 1 % with the NOAA classic ozone instrument over the
large observed range of ozone mixing ratios (Fig. A4). However, as discussed
in Sect. 3, requirements are different in the TTL, where ozone mixing ratios
are very low, often less than 30 ppb. Both measurement accuracy and
precision are essential at these low values, and even errors of a few parts per billion in
ozone (or small measurement biases in water vapor and other trace gases) can
lead to different interpretations of the underlying atmospheric processes.
The accuracy of the model 205 ozone instrument can be calculated similarly
to Proffitt and McLaughlin (1983), where the most important uncertainties
are the absorption cross section of ozone, the accuracy of cell temperature
and pressure measurements, the absorption path length, and any
nonlinearities in detector response. These add up to a few percent, but the
initial calibration of the 2B instruments against a reference standard (by
2B) should correct for any slight inaccuracies. In all our calibration
checks, the slope was within 1 % of unity and the offset less than 2 ppb
(usually <inline-formula><mml:math id="M240" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 1 ppb) at ambient pressure (<inline-formula><mml:math id="M241" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 840 mbar in
Boulder, CO, and 920 mbar in California) and room temperature.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6"><?xmltex \currentcnt{6}?><?xmltex \def\figurename{Figure}?><label>Figure 6</label><caption><p id="d1e3564">H<inline-formula><mml:math id="M242" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> from UCATS, PANTHER, and PFPs showed close agreement in
the troposphere and lower stratosphere during ATom. Because of the dominant
soil sink for H<inline-formula><mml:math id="M243" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>, mixing ratios are lower near the surface, as seen on
this flight from Thule, Greenland, to Anchorage, AK, over the Canadian
Arctic, the Arctic Ocean, and Alaska.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://amt.copernicus.org/articles/14/6795/2021/amt-14-6795-2021-f06.png"/>

        </fig>

      <p id="d1e3591">As described in Sect. 3, two model 205 sensors were flown in UCATS during
ATTREX-2 and 3, with data from the two instruments merged into a single data
set with faster time resolution than the original instrument. A comparison
of UCATS and NOAA-2 ozone data from ATTREX-2 (Fig. 7) shows that the slope
is close to unity with a crossover point near 500 ppb. At low ozone (20–30 ppb), the UCATS data are on average lower by 3–4 ppb. Since the absorption
cross sections are the same for both instruments and cell length is fixed
(and measured to better than 1 % accuracy), the<?pagebreak page6805?> principal known sources of
error are inaccuracies in measured cell temperature and pressure. The
pressure sensor in the older 2B instrument was carefully calibrated over a
range of pressures for many years (2010–2016) and was stable throughout
that time. A small correction was made to account for the pressure drop from
the cell to its outlet (where pressure is measured). This introduced about a
1 % increase in ozone at the highest altitudes but was negligible at lower
altitudes. Temperature is measured on the cell body rather than in the
airflow, but air temperature should have time to equilibrate inside UCATS
before reaching the ozone instruments. (Flow to each 2B is <inline-formula><mml:math id="M244" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 10 % of that for NOAA-2, which has been shown to measure temperature
accurately after warming ambient air as it flows to the cell (Gao et al.,
2012).) The offset between NOAA-2 and 2B data bears further examination. UV
ozone photometers have been shown to produce offsets when transitioning from
wet to dry conditions (Wilson and Birks, 2006), and that is certainly the
case for the model 205, as discussed in the following section. However,
except on initial ascent, air sampled in ATTREX was always extremely dry,
and any artifact should become negligible within 1 h. Similar agreement
between NOAA-2 and the original 2B instrument was obtained on ATTREX-1 and
GloPac. Laboratory tests for measurement artifacts of the 2B under various
conditions produced mostly negligible offsets and always less than 5 ppb.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7"><?xmltex \currentcnt{7}?><?xmltex \def\figurename{Figure}?><label>Figure 7</label><caption><p id="d1e3604">Merged UCATS ozone data from the two 2B model 205 instruments
plotted against coincident data from the NOAA Chemical Sciences Laboratory
NOAA-2 ozone instrument for all six research flights during ATTREX-2 in
2013. The green line is the least squares fit to the data (parameters shown
in the legend), and the <inline-formula><mml:math id="M245" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> line is shown in black. The inset shows ozone
values <inline-formula><mml:math id="M246" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 100 ppb.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://amt.copernicus.org/articles/14/6795/2021/amt-14-6795-2021-f07.png"/>

        </fig>

      <?pagebreak page6806?><p id="d1e3632">During ATTREX-3, payload weight and balance issues prevented the NOAA-2
instrument from being flown on the Global Hawk. Coincident balloon-borne
electrochemical concentration cell (ECC) ozonesonde launches from Guam
provide a comparison for these flights. Data from the last 2 h of the
16–17 February 2014 Global Hawk flight (Fig. 8) most closely overlapped one
of the balloon profiles in space and time (within 100 km and 1–2 h). The
agreement between the ECC and the 2B instruments in the troposphere
(<inline-formula><mml:math id="M247" display="inline"><mml:mo lspace="0mm">&lt;</mml:mo></mml:math></inline-formula> 16 km, where the balloon and aircraft were in closest proximity)
is quite good and shows no significant bias in the UCATS data. A further
check on UCATS ozone data is shown in Fig. A5 with ozone data from the GV
aircraft (operating during the concurrent CONTRAST mission; Pan et al.,
2017), the Global Hawk, and the Guam ozonesonde launch, which was timed to
overlap with the return of the Global Hawk on 13 February. In summary, based
on laboratory calibrations, tests, and in-flight comparisons, we assign a
systematic uncertainty of less than 5 ppb to our model 205 ozone data in the
TTL and lower stratosphere. The precision in the TTL ranged from <inline-formula><mml:math id="M248" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>5
to 10 ppb but can be improved by temporal averaging. The low values of ozone
in the TTL demonstrate the importance of precise and sensitive ozone
measurements in this region and the need to minimize or eliminate any
systematic errors.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8"><?xmltex \currentcnt{8}?><?xmltex \def\figurename{Figure}?><label>Figure 8</label><caption><p id="d1e3651">UCATS and ozonesonde data from 17 February 2014 near Andersen Air Force Base, Guam. UCATS data (solid green squares) from the last part of the flight
are binned and averaged by altitude; the solid black circles are the binned
and averaged sonde descent data from near when the Global Hawk landed. The
inset shows a scatter plot of binned UCATS and sonde data at coincident
altitudes; the <inline-formula><mml:math id="M249" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> line is shown in black.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://amt.copernicus.org/articles/14/6795/2021/amt-14-6795-2021-f08.png"/>

        </fig>

</sec>
<sec id="Ch1.S4.SS3">
  <label>4.3</label><title>Ozone – troposphere</title>
      <p id="d1e3680">As described above, the model 205 in UCATS disagreed with the NOAA
classic ozone instrument during HIPPO following transitions between wet and
dry air. Most flights had only minor artifacts, but the issue was most
pronounced in the tropics, with an example shown in Fig. 9 (top). At low
altitudes there was generally good agreement (mean difference is 0.4 ppb,
standard deviation is <inline-formula><mml:math id="M250" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>4.2 ppb for HIPPO 4), but as the GV aircraft
climbed out of the very wet lower troposphere to higher altitudes, or
descended back into the lower troposphere, changes in water retained in the
scrubber likely affected the reflected light along the sides of the cell,
causing anomalous ozone readings. Even though flows were greater than 1 L/min, the instrument took 15 min or more to recover. In ATom, with
the newer model 211 instrument and moisture exchangers for both scrubbed and
unscrubbed air, the agreement was much closer over a similar flight track,
and there were no anomalous data segments as the DC-8 ascended and descended
(Fig. 9, bottom). The one discrepancy is in the tropical marine boundary
layer (MBL), where UCATS was typically a few parts per billion higher than the
chemiluminescence instrument. This disagreement is outside the combined
uncertainties of the two instruments and is not currently understood; UCATS
showed no differences when calibrated with wet or dry air in the laboratory,
and the effect of water vapor on the chemiluminescence instrument has
recently been re-checked. There were no offsets in the high-latitude MBL
(agreement within 1 ppb; see Fig. A7), so it is presumably related to the
high humidity or something else present in the tropical MBL.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F9"><?xmltex \currentcnt{9}?><?xmltex \def\figurename{Figure}?><label>Figure 9</label><caption><p id="d1e3692">Ozone time series from HIPPO <bold>(a)</bold> and ATom <bold>(b)</bold>. The upper
plot shows an example of the discrepancies between the 2B model 205 and
NOAA classic ozone instruments observed in the tropics during HIPPO;
extratropical flights were in closer agreement. The lower plot shows ATom
data (over a similar range of latitudes) from the NOAA chemiluminescence
instrument and the UCATS model 211 ozone instrument, modified with moisture
exchangers to ensure that air to both cells remained at reasonably high
humidity.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://amt.copernicus.org/articles/14/6795/2021/amt-14-6795-2021-f09.png"/>

        </fig>

      <?pagebreak page6807?><p id="d1e3707"><?xmltex \hack{\newpage}?>Scatter plots of UCATS ozone data against the corresponding instrument from
NOAA CSL (Fig. 10) showed reasonable overall agreement in HIPPO, with the
slope within 1 % of unity. But in HIPPO, there are many UCATS data points
in the troposphere with significantly higher ozone than measured by the
NOAA classic ozone instrument (e.g., near 50 ppb). The improvement between HIPPO
(top) and ATom (bottom) is dramatic. This is partly due to the longer
optical path length in the model 211, as well as other instrumental
improvements, but the addition of the Nafion moisture exchangers makes a
substantial difference as the aircraft transitions between wet and dry air
masses. It should be noted that the NOAA CSL instruments being compared to
here have completely different designs – the classic ozone instrument is a UV photometer
like the 2B, while in ATom, ozone was detected by chemiluminescence, though
it is fundamentally calibrated using an optical measurement. Both of these
instruments have a precision in the troposphere of about <inline-formula><mml:math id="M251" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>0.5 ppb.
The larger deviations occasionally observed in the ATom data are mostly due
to timing mismatches during flight segments with sharp gradients in ozone,
along with occasional outliers from all instruments (see Fig. A6). The older
model 205 was also flown during ATom as a backup and for comparison with the
model 211; the model 205 showed some of the same deviations between wet and
dry air as in HIPPO, while the model 211 with Nafion moisture exchangers
tracked the CSL instrument closely. For many applications, such as
climatologies, chemical modeling, and transport studies in the troposphere,
the precision of the model 211 (<inline-formula><mml:math id="M252" display="inline"><mml:mo lspace="0mm">±</mml:mo></mml:math></inline-formula>0.5 ppb at sea level) as flown
during ATom is more than adequate, given the good overall agreement with the
chemiluminescence instrument. In the stratospheric parts of the ATom
flights, the model 211 instrument had precision of about <inline-formula><mml:math id="M253" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>1 % and
agreement within 2 % (not shown).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F10"><?xmltex \currentcnt{10}?><?xmltex \def\figurename{Figure}?><label>Figure 10</label><caption><p id="d1e3735">Scatter plots of UCATS ozone (2B model 205) vs. CSL classic
ozone <bold>(a)</bold> and UCATS ozone (2B model 211) vs. CSL chemiluminescence ozone
<bold>(b)</bold> from tropospheric observations.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://amt.copernicus.org/articles/14/6795/2021/amt-14-6795-2021-f10.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F11" specific-use="star"><?xmltex \currentcnt{11}?><?xmltex \def\figurename{Figure}?><label>Figure 11</label><caption><p id="d1e3752"><bold>(a, b)</bold> Time series and scatter plots for UCATS TDL water, DLH, and
NOAA CSL water during ATTREX. The blue lines in the right-hand plots are
the <inline-formula><mml:math id="M254" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> line for UCATS and DLH for the same flights as on the left. <bold>(c, d)</bold> Time series of the new UCATS TDL hygrometer and DLH, showing the improved
precision at low water vapor mixing ratios. The right-hand panel shows the
good general agreement between UCATS and DLH over the low and middle range
of mixing ratios for the same flight.</p></caption>
          <?xmltex \igopts{width=369.885827pt}?><graphic xlink:href="https://amt.copernicus.org/articles/14/6795/2021/amt-14-6795-2021-f11.png"/>

        </fig>

<?xmltex \hack{\newpage}?>
</sec>
<?pagebreak page6808?><sec id="Ch1.S4.SS4">
  <label>4.4</label><title>Water vapor</title>
      <p id="d1e3788">The original MayComm TDL instrument was used in UCATS from 2006 to the first
ATom deployment in July–August 2016. Its uncertainty was the sum of 5 %
<inline-formula><mml:math id="M255" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 1 ppm, based on laboratory calibrations with gravimetrically prepared
standards and frost point hygrometers. The <inline-formula><mml:math id="M256" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>1 ppm precision limit
made stratospheric measurements above <inline-formula><mml:math id="M257" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 16 km (where water
vapor is typically 2–8 ppm) somewhat qualitative compared to the troposphere
and lower stratosphere (H<inline-formula><mml:math id="M258" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O <inline-formula><mml:math id="M259" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 10 ppm). In addition, there
was a temperature effect on the electronics of the long-path channel (for
low water vapor) such that the sensitivity dropped with increasing
temperature inside UCATS, up to 30 % in extreme cases. This was addressed
by adding a Peltier cooling circuit to the TDL electronics box during HIPPO,
which kept it at 25 <inline-formula><mml:math id="M260" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (except on occasional cold or very warm
takeoffs), and also by calibrating and correcting for the temperature
effect.</p>
      <p id="d1e3838">For ATom (starting with deployment 2, January–February 2017), we integrated
a new, larger TDL instrument from Port City Instruments, the successor to
MayComm. The longer wavelength (2.574 <inline-formula><mml:math id="M261" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> vs. 1.37 <inline-formula><mml:math id="M262" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>) utilizes
stronger absorption lines for a precision of <inline-formula><mml:math id="M263" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>0.1 ppm or better in
the stratosphere; it can also measure up to 40 000 ppm water vapor, higher
than the maximum in the tropical MBL. Similar to the previous instrument,
the large dynamic range was achieved by using two optical paths in the cell,
strong and weak absorption lines, and different measurement techniques as
described in Sect. 2.3. The data were found to have minimal or at least much
less sensitivity to instrument temperature compared to the earlier version.
For calibrations up to 200 ppm, we used ultra-pure air and gravimetrically
prepared standards (Brewer et al., 2020). We also calibrated the instrument
over the full range of water vapor mixing ratios and pressures found in the
troposphere and lower stratosphere (near 0 to <inline-formula><mml:math id="M264" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 30 000 ppm and
<inline-formula><mml:math id="M265" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 100–1000 mbar) with a bubbler and a frost point hygrometer
(MBW, model 373LX). Air from the bubbler (or the standards) was passed
through the TDL cell and then to the MBW, as well as to both instruments in
parallel. Illustrative plots and in-flight comparisons for both instruments
are shown in Fig. 11. Calibrations of the TDL are ongoing, as disagreements
with the DLH instrument were observed in ATom, particularly at very high
water vapor mixing ratios, <inline-formula><mml:math id="M266" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 20 000 ppm, where the TDL data seem
to be anomalously high (not shown).</p>
</sec>
</sec>
<sec id="Ch1.S5" sec-type="conclusions">
  <label>5</label><title>Summary and future plans</title>
      <p id="d1e3900">The UCATS instrument integrates three different sensor systems into one
compact package for use on UAS and piloted aircraft. The combination of
ozone, water vapor, and long-lived trace gases allows for stand-alone
experiments with few if any other instruments. It can also contribute to
missions on large platforms by measuring selected (and different)
long-lived tracers by GC/ECD and also by providing backup measurements of
species such as ozone and water. UCATS relied<?pagebreak page6809?> on technology developed for
the ACATS instrument (Elkins et al., 1996) and improvements to
chromatography for the LACE balloon instrument (Moore et al., 2003). Further
improvements made for UCATS were largely to mitigate the effects of water
vapor on the GC and ozone systems, allowing measurements throughout the
troposphere and stratosphere, as well as continued upgrades of all
components.</p>
      <p id="d1e3903">Over a decade and a half, UCATS has successfully provided trace gas
measurements on different types of aircraft for atmospheric science missions
with diverse sets of objectives. After demonstration projects focused on the
stratosphere, it was used for studies of stratosphere–troposphere exchange
and atmospheric transport (START-08 and HIPPO), entry of air into the
tropical stratosphere and TTL composition (ATTREX), and tropospheric
chemistry (ATom). Over the course of these projects, UCATS evolved from a
stratospheric instrument for small UAS payloads to an important contributor
on multi-instrument campaigns and geographically extensive tropospheric
missions. Table 2 summarizes the data quality over several missions,
reflecting improvements in stability for measurements of N<inline-formula><mml:math id="M267" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O and
SF<inline-formula><mml:math id="M268" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula>, as well as improvements in precision and accuracy for ozone. Data from
UCATS have been used to help constrain the interhemispheric difference in OH
radical concentrations (Patra et al., 2014) and quantify tropospheric age of
air and transport using SF<inline-formula><mml:math id="M269" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> (Waugh et al., 2013). Studies have also
been performed with UCATS data to probe the composition and structure of the
TTL, including halogen chemistry (Jensen et al., 2017; Werner et al., 2017;
Navarro et al., 2017), and hydroxyl radical reactivity in the remote
troposphere (Thames et al., 2020).
<?xmltex \hack{\newpage}?>
At present, UCATS continues to evolve and has now been upgraded and
repackaged for the NASA Dynamics and Chemistry of the Summer Stratosphere
(DCOTSS) mission. The initial impetus for this change came from the fact
that the UCATS enclosure, extended to accommodate the new ozone and water
instruments for ATom, no longer fits in the vertical space available in the
upper Q-bay of the ER-2 aircraft, which will be used for DCOTSS. Since the
focus of DCOTSS is on stratospheric ozone and halogen chemistry, the GC is
configured to measure N<inline-formula><mml:math id="M270" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O, SF<inline-formula><mml:math id="M271" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula>, and CFCs (as initially flown on
Altair in 2005), and a third GC channel has been added to measure
shorter-lived chlorocarbons including chloroform (CHCl<inline-formula><mml:math id="M272" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>), carbon
tetrachloride (CCl<inline-formula><mml:math id="M273" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula>), and trichloroethylene (C<inline-formula><mml:math id="M274" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>HCl<inline-formula><mml:math id="M275" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>). These
changes will allow us to measure much of the organic chlorine budget,
including the major long-lived organic chlorine compounds and a few of the
more short-lived ones. The repackaged UCATS also has a cleaner and more
rational layout, with modular and removable GC channels, ozone, and water
instruments, as well as more modern electronics, flow controllers, and pressure
controllers. Test and science flights on the NASA ER-2 aircraft are now
underway in 2021.</p><?xmltex \hack{\clearpage}?>
</sec>

      
      </body>
    <back><app-group>

<?pagebreak page6810?><app id="App1.Ch1.S1">
  <?xmltex \currentcnt{A}?><label>Appendix A</label><title/>
      <p id="d1e4001">Further details about the UCATS instrument and results from different
campaigns are collected here. They include schematics of the ozone and water
components, additional data and comparison figures, and details about
precision and agreement with other measurements.</p>
<sec id="App1.Ch1.S1.SS1">
  <label>A1</label><title>Ozone and water instrument schematics</title>

      <?xmltex \floatpos{h!}?><fig id="App1.Ch1.S1.F12"><?xmltex \currentcnt{A1}?><?xmltex \def\figurename{Figure}?><label>Figure A1</label><caption><p id="d1e4013"><bold>(a)</bold> For all 2B ozone sensors in UCATS, ambient air is split into two
paths, one of which is catalytically scrubbed of ozone with MnO<inline-formula><mml:math id="M276" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>-coated
screens and then alternately sent to the two cells on a 2 s cycle (“no”
means normally open, “nc” means normally closed, and “com” means common). The other
cell is flushed with ambient air, and a measurement is made every 2 s.
Data are averaged to 10 s or output at the original 2 s rate. For
the model 211, we humidified the airflow prior to entering the cells with
Nafion moisture exchangers. Cell pressure is measured at the outlet of one
of the cells (“PM”), and on the model 211 flows are measured (“FM”) and can
be manually adjusted upstream of the pump. A small settling volume can also
be used upstream of the pump to minimize pressure fluctuations. <bold>(b)</bold> The absorption cell for the Port City TDL hygrometer has the
diode laser at one end, with a partially reflecting mirror located
approximately 2.5 cm from the laser and radiation reflected back to a sealed
photodiode for the short-path (high water vapor) measurement. The remainder
of the beam is directed by mirrors through a Herriott cell arrangement to a
diode opposite the laser for the long-path measurement. Air flows into the
cell through the port farther away from the laser and pressure is measured
right at the outlet of the cell to avoid trapped air volumes and to promote
smooth flow through the cell. The electronics are in a separate box (not
shown). In the earlier MayComm version, the laser was together with the
electronics and reached the cell through fiber optic cables, but the cell
geometry was similar overall, except that the pressure sensor was in the
middle of the cell, which could lead to issues with trapped air and delays
in the cell drying out after transitions between wet and dry air masses.</p></caption>
          <?xmltex \hack{\hsize\textwidth}?>
          <?xmltex \igopts{width=384.112205pt}?><graphic xlink:href="https://amt.copernicus.org/articles/14/6795/2021/amt-14-6795-2021-f12.png"/>

        </fig>

<?xmltex \hack{\clearpage}?>
</sec>
<?pagebreak page6811?><sec id="App1.Ch1.S1.SS2">
  <label>A2</label><title>GC calibrations</title>

      <?xmltex \floatpos{h!}?><fig id="App1.Ch1.S1.F13"><?xmltex \currentcnt{A2}?><?xmltex \def\figurename{Figure}?><label>Figure A2</label><caption><p id="d1e4050">N<inline-formula><mml:math id="M277" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O calibration curve from laboratory experiments during the
ATom-2 deployment. UCATS is calibrated on the ground with a set of standards
with precisely measured mixing ratios for all gases. The calibration gas
bottle on the aircraft is filled with air from the flight standard, which is
generally background tropospheric air from Niwot Ridge, CO. In this figure,
it is the set of points near 330 ppb. The slight nonlinearity is taken into
account when calculating mixing ratios from measured ambient air and
calibration gas samples in flight. Calibration curves for other molecules
measured by UCATS are even closer to linear. The residuals from the fitted
curve and calibration data are shown at the top of the figure and are used
in calculating the uncertainty of reported data.</p></caption>
          <?xmltex \hack{\hsize\textwidth}?>
          <?xmltex \igopts{width=355.659449pt}?><graphic xlink:href="https://amt.copernicus.org/articles/14/6795/2021/amt-14-6795-2021-f13.png"/>

        </fig>

<?xmltex \hack{\clearpage}?>
</sec>
<?pagebreak page6812?><sec id="App1.Ch1.S1.SS3">
  <label>A3</label><?xmltex \opttitle{Tropical N${}_{{2}}$O and SF${}_{{6}}$ data}?><title>Tropical N<inline-formula><mml:math id="M278" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O and SF<inline-formula><mml:math id="M279" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> data</title>

      <?xmltex \floatpos{h!}?><fig id="App1.Ch1.S1.F14"><?xmltex \currentcnt{A3}?><?xmltex \def\figurename{Figure}?><label>Figure A3</label><caption><p id="d1e4101">N<inline-formula><mml:math id="M280" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O <bold>(a)</bold> and SF<inline-formula><mml:math id="M281" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula> <bold>(b)</bold> time series plots from the
3 February 2017 ATom-2 flight from Kona, HI, to Fiji through the tropics.
The precision of the in situ instruments was near 1 ppb N<inline-formula><mml:math id="M282" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O and 0.05 ppt SF<inline-formula><mml:math id="M283" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula>. Throughout this flight the DC-8 remained in the troposphere.
The weak vertical gradients in these long-lived tracers (compare to Fig. 5
at high latitudes) allow the latitudinal gradient to be easily discerned
(lower values in the Southern Hemisphere), particularly for SF<inline-formula><mml:math id="M284" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:math></inline-formula>.
Flights through very humid air tested the ability of UCATS to maintain
stable chromatography and good precision.</p></caption>
          <?xmltex \hack{\hsize\textwidth}?>
          <?xmltex \igopts{width=355.659449pt}?><graphic xlink:href="https://amt.copernicus.org/articles/14/6795/2021/amt-14-6795-2021-f14.png"/>

        </fig>

<?xmltex \hack{\clearpage}?>
</sec>
<?pagebreak page6813?><sec id="App1.Ch1.S1.SS4">
  <label>A4</label><title>GloPac ozone</title>

      <?xmltex \floatpos{h!}?><fig id="App1.Ch1.S1.F15"><?xmltex \currentcnt{A4}?><?xmltex \def\figurename{Figure}?><label>Figure A4</label><caption><p id="d1e4177">Comparison of UCATS (model 205) ozone against the NOAA CSL classic
ozone instrument for the entire set of GloPac flights. With its long range and
duration, including a 28 h flight on 23 April 2010, the Global Hawk
sampled a wide range of air masses from the tropics to the North Pole,
including a polar vortex fragment. It encountered very high ozone values
considering its maximum altitude is just over 19 km; this was possible
during and after the season of strong descent near the Northern Hemisphere
polar vortex. Almost all the data shown here were obtained in the
stratosphere; no attempt was made to exclude data from the troposphere on
ascents, descents, and vertical profiles in the tropics. The linear fit line
is always below the <inline-formula><mml:math id="M285" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> line in this plot, but UCATS data were actually
about 0 %–1 % higher than the classic ozone instrument at the highest values, and UCATS
data were about 4.5 ppb lower at the lowest ozone (30–40 ppb, see inset);
the linear fit parameters do not quite capture the complete range of the
observations. The group of points below the <inline-formula><mml:math id="M286" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> line near 2500 ppb are
almost all from the flight of 7 April; it is not understood what caused
this.</p></caption>
          <?xmltex \hack{\hsize\textwidth}?>
          <?xmltex \igopts{width=355.659449pt}?><graphic xlink:href="https://amt.copernicus.org/articles/14/6795/2021/amt-14-6795-2021-f15.png"/>

        </fig>

<?xmltex \hack{\clearpage}?>
</sec>
<?pagebreak page6814?><sec id="App1.Ch1.S1.SS5">
  <label>A5</label><title>ATTREX ozone consistency between different platforms</title>

      <?xmltex \floatpos{h!}?><fig id="App1.Ch1.S1.F16"><?xmltex \currentcnt{A5}?><?xmltex \def\figurename{Figure}?><label>Figure A5</label><caption><p id="d1e4224">Combined ozone data from the Global Hawk (UCATS) on
12–13 February (circles; mainly above 12 km), the GV (NCAR) on   12 February (diamonds;
0–14 km), and the ozonesonde (NOAA GML) launch on  13 February (black
squares). The aircraft data are color coded by latitude; the sonde data
(both ascent and descent) are all from near Guam (13.5<inline-formula><mml:math id="M287" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N) and
would appear light green if color coded. These were not coincident
measurements, as the two aircraft sampled different air masses and the sonde
was launched 1 d later than the GV flight, but the 2 d comparison
shows consistency between the various measurements and many of the typical
features encountered in February 2014 over the western tropical Pacific.
Ozone was low at the surface (<inline-formula><mml:math id="M288" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 20 ppb), with large
variability in the mid-troposphere (Pan et al., 2015; Anderson et al., 2016)
caused by frequent encounters with filaments of high ozone air over a much
lower background. A second minimum is visible in the upper troposphere up to
the base of the TTL. In the TTL, ozone gradually increased with increasing
altitude, with large-scale variations related to latitude and long-range
transport, and then increased much more sharply near the top of the TTL
(<inline-formula><mml:math id="M289" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 17.5 km or 380 K), as air with greater stratospheric
character was sampled.</p></caption>
          <?xmltex \hack{\hsize\textwidth}?>
          <?xmltex \igopts{width=213.395669pt}?><graphic xlink:href="https://amt.copernicus.org/articles/14/6795/2021/amt-14-6795-2021-f16.png"/>

        </fig>

<?xmltex \hack{\clearpage}?>
</sec>
<?pagebreak page6815?><sec id="App1.Ch1.S1.SS6">
  <label>A6</label><title>Ozone gradients and precision</title>

      <?xmltex \floatpos{h!}?><fig id="App1.Ch1.S1.F17"><?xmltex \currentcnt{A6}?><?xmltex \def\figurename{Figure}?><label>Figure A6</label><caption><p id="d1e4270">Archived UCATS and CSL ozone data for the ATom flight of
29 January 2017, from Palmdale, CA, to Anchorage, AK <bold>(a)</bold>. The black circles
indicate the difference between the two instruments, with 1 s CSL data
interpolated to match the sampling times of the 2 s UCATS data. Other
than adjustments for timing, no corrections were made to either data set.
The visual agreement for the time series is impressive, with both
instruments capturing the atmospheric variability, but nonetheless the black
circles indicate differences over 40 ppb in places. As noted in the main
text, this is due to slight offsets in timing and also to the fact that
the 2B instrument has a short “dead time” when flows switch between cells,
whereas the CSL data are essentially continuous and reported at 1 Hz for
ease of use and to achieve a good signal-to-noise ratio. Where ozone is varying
rapidly, such as this level flight leg at 11.3 km, or ascents and descents,
these two effects lead to many of the outliers in comparison plots (such
as the ATom panel in Fig. 10). The lower plot shows the same data but from
the 10 s merge file commonly used for analyses. Some of the fine
structure in the raw data is washed out, but there are still differences of
up to 5 %, even though the two data sets appear to match almost perfectly.
As an example of the precision possible with the UCATS instrument, we next
show a segment near the ocean surface with much less variability (Fig. A7).</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://amt.copernicus.org/articles/14/6795/2021/amt-14-6795-2021-f17.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="App1.Ch1.S1.F18"><?xmltex \currentcnt{A7}?><?xmltex \def\figurename{Figure}?><label>Figure A7</label><caption><p id="d1e4284">Same as the previous figure but for  19 May 2018. Here, at the
bottom of a profile over the Beaufort Sea, ozone was low and nearly constant
for about 6 min. The mean difference between data from the two
instruments was 0.4 ppb, and the standard deviation of the difference was
0.5 ppb for the 10 s merge and 0.7 ppb for 2 s data. Near the
start of plots, the agreement is actually better for the 2 s data than
the 10 s merge, and at the end of the time series, the disagreement
between the two instruments changes sign from the 10 s merge to the raw
data. This points to the difficulties of data merges in general and the
fundamental limits on comparing two relatively fast data sets. For ATom,
where the goal was to provide comprehensive data sets covering broad regions
of the global remote atmosphere, this is insignificant.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://amt.copernicus.org/articles/14/6795/2021/amt-14-6795-2021-f18.png"/>

        </fig>

<?xmltex \hack{\clearpage}?>
</sec>
</app>
  </app-group><notes notes-type="dataavailability"><title>Data availability</title>

      <p id="d1e4300">HIPPO data are publicly available at <uri>https://www.eol.ucar.edu/field_projects/hippo</uri> (last access: 18 October 2021) and at <ext-link xlink:href="https://doi.org/10.26023/P1G0-ZSMS-240B" ext-link-type="DOI">10.26023/P1G0-ZSMS-240B</ext-link> (Wofsy et al., 2011) and <ext-link xlink:href="https://doi.org/10.26023/HSPN-PGNV-WA0M" ext-link-type="DOI">10.26023/HSPN-PGNV-WA0M</ext-link> (Hurst et al., 2011).  GloPac, ATTREX, and POLARIS data are available at <uri>https://espoarchive.nasa.gov/archive/browse/glopac</uri> (Hintsa et al., 2010), <uri>https://espoarchive.nasa.gov/archive/browse/attrex</uri> (Hintsa et al., 2014), and <uri>https://espoarchive.nasa.gov/archive/browse/polaris</uri> (Elkins et al., 1998), respectively.  ATom data are available at <uri>http://espoarchive.nasa.gov/archive/browse/atom</uri> (last access: 18 October 2021), <uri>https://daac.ornl.gov/ATOM/campaign/</uri> (last access: 18 October 2021), and at <ext-link xlink:href="https://doi.org/10.3334/ORNLDAAC/1581" ext-link-type="DOI">10.3334/ORNLDAAC/1581</ext-link> (Wofsy et al., 2018).</p>
  </notes><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d1e4334">EJH maintained and operated the UCATS instrument since May 2009, analyzed
the data presented here, and wrote the manuscript; FLM designed and built
UCATS, operated it on several missions, and worked closely with it
throughout; DFH operated UCATS on its first UAS missions and helped to
prepare this paper; GS Dutton, BDH, JDN, SAM, LPW, AM, and JWE assisted
with laboratory work and field missions; JWE was the principal investigator
for UCATS for all NASA and NOAA missions through 2020; BRM, SAM, EGH, AFJ,
AWR, TDT, LAW, CRT, JP, IB, TBR, BCD, YGR, RC, JVP, SCW, EK, GS Diskin, and
TPB provided data and helped with other aspects of the field missions. All
the coauthors provided extensive comments and information for this
paper.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d1e4340">The authors declare that they have no conflict of interest.</p>
  </notes><notes notes-type="disclaimer"><title>Disclaimer</title>

      <p id="d1e4346">Publisher's note: Copernicus Publications remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e4352">This work would not have been possible without the pilots, crew, and staff
of the various aircraft involved, the NCAR Research Aviation Facility, and
the NASA Earth Science Project Office.
We are grateful to Ru-Shan Gao for discussions, technical expertise, and other support. We thank Andrew Weinheimer, Denise Montzka, and Lisa Kaser for ozone data from the GV during ATTREX and CONTRAST, Craig Williford and Andrew Turnipseed for help with 2B ozone instruments, Randy May for many helpful discussions about TDL water instruments, and Mathew Gentry for thoughtful comments on this paper.</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d1e4357">Support was provided for HIPPO by NSF award no. AGS-0628452, for ATTREX by NASA Earth Venture program award no. NNA11AA55I, and for ATom by NASA award no. NNH17AE26I; additional support was provided by NASA Upper Atmosphere Research Program award no. NNH13AV69I.  This work was also supported in part by the NOAA Cooperative Agreement with CIRES, NA17OAR4320101.  James W. Elkins, Bradley D. Hall, and Stephen A. Montzka were supported by NOAA’s Climate Program Office (CPO).</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d1e4363">This paper was edited by Thomas Röckmann and reviewed by Marc von Hobe and one anonymous referee.</p>
  </notes><ref-list>
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    <!--<article-title-html>UAS Chromatograph for Atmospheric Trace Species (UCATS) – a versatile instrument for trace gas measurements on airborne platforms</article-title-html>
<abstract-html><p>UCATS (the UAS Chromatograph for Atmospheric Trace Species) was
designed and built for observations of important atmospheric trace gases
from unmanned aircraft systems (UAS) in the upper troposphere and lower
stratosphere (UTLS). Initially it measured major chlorofluorocarbons (CFCs)
and the stratospheric transport tracers nitrous oxide (N<sub>2</sub>O) and sulfur
hexafluoride (SF<sub>6</sub>), using gas chromatography with electron capture
detection. Compact commercial absorption spectrometers for ozone (O<sub>3</sub>)
and water vapor (H<sub>2</sub>O) were added to enhance its capabilities on
platforms with relatively small payloads. UCATS has since been reconfigured
to measure methane (CH<sub>4</sub>), carbon monoxide (CO), and molecular hydrogen
(H<sub>2</sub>) instead of CFCs and has undergone numerous upgrades to its
subsystems. It has served as part of large payloads on stratospheric UAS
missions to probe the tropical tropopause region and transport of air into
the stratosphere; in piloted aircraft studies of greenhouse gases,
transport, and chemistry in the troposphere; and in 2021 is scheduled to
return to the study of stratospheric ozone and halogen compounds, one of its
original goals. Each deployment brought different challenges, which were
largely met or resolved. The design, capabilities, modifications, and some
results from UCATS are shown and described here, including changes for
future missions.</p></abstract-html>
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