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  <front>
    <journal-meta><journal-id journal-id-type="publisher">AMT</journal-id><journal-title-group>
    <journal-title>Atmospheric Measurement Techniques</journal-title>
    <abbrev-journal-title abbrev-type="publisher">AMT</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Atmos. Meas. Tech.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1867-8548</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/amt-18-5349-2025</article-id><title-group><article-title>A relaxed eddy accumulation flask sampling system for <sup>14</sup>C-based partitioning of fossil and non-fossil CO<sub>2</sub> fluxes</article-title><alt-title>REA for <sup>14</sup>C-based ff<inline-formula><mml:math id="M4" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> flux estimation</alt-title>
      </title-group>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1 aff2">
          <name><surname>Kunz</surname><given-names>Ann-Kristin</given-names></name>
          <email>ann-kristin.kunz@iup.uni-heidelberg.de</email>
        <ext-link>https://orcid.org/0009-0007-2937-4873</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Borchardt</surname><given-names>Lars</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Christen</surname><given-names>Andreas</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-3864-1703</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Della Coletta</surname><given-names>Julian</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Eritt</surname><given-names>Markus</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Gutiérrez</surname><given-names>Xochilt</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff4">
          <name><surname>Hashemi</surname><given-names>Josh</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Hilland</surname><given-names>Rainer</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-0274-6581</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Jordan</surname><given-names>Armin</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Kneißl</surname><given-names>Richard</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Legendre</surname><given-names>Virgile</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" deceased="yes" corresp="no" rid="aff2">
          <name><surname>Levin</surname><given-names>Ingeborg</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Preunkert</surname><given-names>Susanne</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-6039-6049</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>Rubli</surname><given-names>Pascal</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff6">
          <name><surname>Stagakis</surname><given-names>Stavros</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-6377-2268</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Hammer</surname><given-names>Samuel</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>Chair of Environmental Meteorology, Faculty of Environment and Natural Resources, University of Freiburg, Freiburg, Germany</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Institute of Environmental Physics, Heidelberg University, Heidelberg, Germany</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>ICOS Flask and Calibration Laboratory, Max Planck Institute for Biogeochemistry, Jena, Germany</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Potsdam, Germany</institution>
        </aff>
        <aff id="aff5"><label>5</label><institution>Empa, Materials, Science and Technology, Dübendorf, Switzerland</institution>
        </aff>
        <aff id="aff6"><label>6</label><institution>Department of Environmental Sciences, University of Basel, Basel, Switzerland</institution>
        </aff><author-comment content-type="deceased"><p>10 February 2024</p></author-comment>
      </contrib-group>
      <author-notes><corresp id="corr1">Ann-Kristin Kunz (ann-kristin.kunz@iup.uni-heidelberg.de)</corresp></author-notes><pub-date><day>15</day><month>October</month><year>2025</year></pub-date>
      
      <volume>18</volume>
      <issue>20</issue>
      <fpage>5349</fpage><lpage>5373</lpage>
      <history>
        <date date-type="received"><day>14</day><month>October</month><year>2024</year></date>
           <date date-type="rev-request"><day>10</day><month>January</month><year>2025</year></date>
           <date date-type="rev-recd"><day>17</day><month>July</month><year>2025</year></date>
           <date date-type="accepted"><day>2</day><month>August</month><year>2025</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2025 Ann-Kristin Kunz et al.</copyright-statement>
        <copyright-year>2025</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://amt.copernicus.org/articles/18/5349/2025/amt-18-5349-2025.html">This article is available from https://amt.copernicus.org/articles/18/5349/2025/amt-18-5349-2025.html</self-uri><self-uri xlink:href="https://amt.copernicus.org/articles/18/5349/2025/amt-18-5349-2025.pdf">The full text article is available as a PDF file from https://amt.copernicus.org/articles/18/5349/2025/amt-18-5349-2025.pdf</self-uri>
      <abstract><title>Abstract</title>

      <p id="d2e294">A relaxed eddy accumulation (REA) system was developed and tested, enabling conditional sampling of air for subsequent <inline-formula><mml:math id="M5" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>  analysis. This allows a <inline-formula><mml:math id="M6" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula>-based estimation of fossil fuel <inline-formula><mml:math id="M7" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations in the collected air samples and, thus, an observation-based partitioning of total <inline-formula><mml:math id="M8" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes measured in urban environments by eddy covariance into fossil and non-fossil components. This article describes the REA system, evaluates its performance, and assesses uncertainties in the concentration measurements. In the REA system, two separate inlet lines equipped with fast-response valves and loop systems adapted to the technical requirements enable the conditional collection of air in two sets of aluminum cylinders for updraft and downdraft samples, respectively. The switching between updraft sampling, downdraft sampling, and standby mode is thereby determined by the vertical wind measured at 20 Hz by a co-located ultrasonic 3D anemometer. A logger program provides different options for the definition of a deadband, which is used to increase the concentration differences between updraft and downdraft samples. After the sampling interval, the accumulated air is transferred by an automated 24-port flask sampler into 3 L glass flasks, which can be analyzed in the laboratory, and the cylinders are  re-evacuated for the next sampling. The REA system was tested in the laboratory, as well as on a tall tower near the city center of Zurich, Switzerland. Between July 2022 and April 2023, 103 REA updraft and downdraft flask pairs for flux measurements and 9 flask pairs for quality control purposes were selected from the tall tower for laboratory analysis based on suitable micro-meteorological conditions. Uncertainties in the <inline-formula><mml:math id="M9" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration differences between updraft and downdraft flasks were estimated by simulations using 20 Hz in situ measurements of a closed-path gas analyzer and an open-path gas analyzer co-located with the ultrasonic anemometer. The measurements show that there is no significant bias in the concentration differences between updraft and downdraft samples and that uncertainties due to the sampling process are negligible when estimating fossil fuel <inline-formula><mml:math id="M10" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> signals. In the Zurich measurements, the <inline-formula><mml:math id="M11" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration differences between the flask pairs agreed with the differences obtained from in situ measurements within <inline-formula><mml:math id="M12" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.005 <inline-formula><mml:math id="M13" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.227 ppm. The largest source of uncertainty, as well as the main limitation, in the separation of fossil and non-fossil <inline-formula><mml:math id="M14" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> signals in Zurich was the small signal-to-noise ratio of the <inline-formula><mml:math id="M15" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M16" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula> differences measured by accelerator mass spectrometry between the updraft and downdraft flasks. The novel REA flask sampling system meets the high technical requirements of the REA method and is a promising technology for observation-based estimation of fossil fuel <inline-formula><mml:math id="M17" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes.</p>
  </abstract>
    
<funding-group>
<award-group id="gs1">
<funding-source>Horizon 2020</funding-source>
<award-id>101037319</award-id>
</award-group>
</funding-group>
</article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d2e444">In view of the overarching aim of reducing anthropogenic greenhouse gas emissions to mitigate climate change, reliable emissions data and timely information on emission reductions are indispensable, especially at the local scale in urban environments where emission reduction efforts are to be assessed. Of central importance in this context is the quantification of fossil fuel <inline-formula><mml:math id="M18" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (ff<inline-formula><mml:math id="M19" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>) emissions in cities as cities contribute more than 70 % to global and European ff<inline-formula><mml:math id="M20" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> emissions <xref ref-type="bibr" rid="bib1.bibx46" id="paren.1"/>. Officially reported bottom-up emission inventories are usually based on statistical activity data, e.g., fossil fuel consumption, and emission factors for the different emission sectors, such as traffic or industry <xref ref-type="bibr" rid="bib1.bibx51" id="paren.2"/>. Downscaled to urban and local resolutions, they form an important basis for policy decisions, as well as for fundamental research <xref ref-type="bibr" rid="bib1.bibx57" id="paren.3"/>. Despite continuous improvements to such inventories, the benefits of bottom-up estimates are currently limited by their coarse spatial and temporal resolutions, large uncertainties in the available methodologies, and the delayed availability of data <xref ref-type="bibr" rid="bib1.bibx17 bib1.bibx26 bib1.bibx48" id="paren.4"/>. To independently validate and refine emission inventories for <inline-formula><mml:math id="M21" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, atmospheric measurements providing timely, localized, and sector-specific top-down information are therefore indispensable.</p>
      <p id="d2e504">The only method that allows direct measurement of vertical atmospheric trace gas fluxes is the eddy covariance (EC) technique, in which vertical wind velocity and trace gas concentrations are both measured at a frequency of 10 to 20 Hz <xref ref-type="bibr" rid="bib1.bibx36" id="paren.5"><named-content content-type="pre">e.g.,</named-content></xref>. Although this method assumes a horizontally flat and homogeneous surface area <xref ref-type="bibr" rid="bib1.bibx16" id="paren.6"/>, studies have shown that EC measurements can also be successfully performed in a complex and heterogeneous urban environment <xref ref-type="bibr" rid="bib1.bibx18 bib1.bibx14 bib1.bibx6" id="paren.7"/>. However, EC-based <inline-formula><mml:math id="M22" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> flux estimates contain fossil <italic>and</italic> non-fossil components. Models and measurements have shown that biospheric <inline-formula><mml:math id="M23" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes (autotrophic and heterotrophic respiration and photosynthesis) can contribute significantly to the total <inline-formula><mml:math id="M24" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> flux measured over an urban area, even in winter <xref ref-type="bibr" rid="bib1.bibx10 bib1.bibx24 bib1.bibx21 bib1.bibx59" id="paren.8"><named-content content-type="pre">e.g.,</named-content></xref>. In addition, human respiration fluxes typically account for about 5 % of the total annual <inline-formula><mml:math id="M25" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> flux, depending on the population and emission density <xref ref-type="bibr" rid="bib1.bibx24 bib1.bibx9" id="paren.9"><named-content content-type="pre">e.g.,</named-content></xref>. Considering the increasing use of biofuels as well <xref ref-type="bibr" rid="bib1.bibx20" id="paren.10"><named-content content-type="pre">e.g.,</named-content></xref>, this results in significant uncertainties in inverse estimates of fossil fuel emissions <xref ref-type="bibr" rid="bib1.bibx9 bib1.bibx58 bib1.bibx48" id="paren.11"/>.</p>
      <p id="d2e585">In separating fossil and non-fossil <inline-formula><mml:math id="M26" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> enhancements, radiocarbon has proven to be the ideal tracer since <inline-formula><mml:math id="M27" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula>-free fossil fuels dilute the atmospheric <inline-formula><mml:math id="M28" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula> ratio compared to a clean background <xref ref-type="bibr" rid="bib1.bibx28 bib1.bibx54" id="paren.12"><named-content content-type="pre">e.g.,</named-content></xref>. To measure the atmospheric <inline-formula><mml:math id="M29" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula> ratio (on the order of 10<sup>−12</sup>), air is commonly sampled in glass flasks and subsequently analyzed in the laboratory, e.g., by accelerator mass spectrometry of the extracted and catalytically reduced <inline-formula><mml:math id="M31" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx31" id="paren.13"/>. Based on long-term atmospheric <inline-formula><mml:math id="M32" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> observations, <xref ref-type="bibr" rid="bib1.bibx28" id="text.14"/> quantified the ff<inline-formula><mml:math id="M33" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> enhancements at three German sites and used the radon tracer method to derive ff<inline-formula><mml:math id="M34" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes for the respective catchment areas. <xref ref-type="bibr" rid="bib1.bibx33" id="text.15"/> analyzed the ratio of carbon monoxide (CO), which is co-emitted with ff<inline-formula><mml:math id="M35" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, to get a continuous time series of the excess ff<inline-formula><mml:math id="M36" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration in Heidelberg, Germany, and used an atmospheric inversion model to obtain ff<inline-formula><mml:math id="M37" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes <xref ref-type="bibr" rid="bib1.bibx34" id="paren.16"/>. <xref ref-type="bibr" rid="bib1.bibx59" id="text.17"/> used the mean <inline-formula><mml:math id="M38" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>CO <inline-formula><mml:math id="M39" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M40" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M41" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> ratio of flask pairs collected at two towers in Indianapolis, USA, to derive ff<inline-formula><mml:math id="M42" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes from <inline-formula><mml:math id="M43" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> fluxes measured by the flux gradient approach. However, to derive ff<inline-formula><mml:math id="M44" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes, all methods rely on the assumption of constant proxy <inline-formula><mml:math id="M45" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> ff<inline-formula><mml:math id="M46" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> ratios or results from inversion models. Direct <inline-formula><mml:math id="M47" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula>-based ff<inline-formula><mml:math id="M48" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> flux measurements have not been possible so far because the precision and temporal resolution of state-of-the-art lasers for <inline-formula><mml:math id="M49" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula> in situ measurements are still far too low for EC measurements <xref ref-type="bibr" rid="bib1.bibx27 bib1.bibx37" id="paren.18"><named-content content-type="pre">e.g., </named-content></xref>. The relaxed eddy accumulation (REA) method <xref ref-type="bibr" rid="bib1.bibx4" id="paren.19"/>, on the other hand, allows for flux estimation from the concentration differences between two conditionally collected air samples, which can be determined in the laboratory. The ff<inline-formula><mml:math id="M50" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes can thus be estimated from the <inline-formula><mml:math id="M51" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula>-based ff<inline-formula><mml:math id="M52" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration differences between updraft and downdraft flask sample pairs.</p>
      <p id="d2e918">In the present study, to our knowledge, the first REA system for <inline-formula><mml:math id="M53" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula>-based estimation of ff<inline-formula><mml:math id="M54" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes was developed. Based on the principles of relaxed eddy accumulation (Sect. <xref ref-type="sec" rid="Ch1.S2"/>) and <inline-formula><mml:math id="M55" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula>-based fossil fuel <inline-formula><mml:math id="M56" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> estimation (Sect. <xref ref-type="sec" rid="Ch1.S3"/>), the purpose of this article is to describe the novel REA flask sampling system (Sect. <xref ref-type="sec" rid="Ch1.S4"/>), as well as to evaluate its performance and assess the uncertainties of the concentration measurements (Sect. <xref ref-type="sec" rid="Ch1.S5"/>). As a proof of concept of the <inline-formula><mml:math id="M57" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula>-based separation of fossil and non-fossil <inline-formula><mml:math id="M58" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> components, the ff<inline-formula><mml:math id="M59" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration differences between updraft and downdraft flasks collected during a field campaign at a tall tower 112 <inline-formula><mml:math id="M60" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> above ground level near the city center of Zurich, Switzerland, are presented (Sect. <xref ref-type="sec" rid="Ch1.S6"/>). This work forms the basis for the derivation and analysis of ff<inline-formula><mml:math id="M61" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes in Zurich and for future deployments in other urban environments.</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>The relaxed eddy accumulation method</title>
      <p id="d2e1040">Relaxed eddy accumulation (REA), first described by <xref ref-type="bibr" rid="bib1.bibx4" id="text.20"/>, is a conditional sampling method for measuring turbulent trace gas fluxes using slow-response analyzers. A fast ultrasonic anemometer measures the vertical wind velocity <inline-formula><mml:math id="M62" display="inline"><mml:mi>w</mml:mi></mml:math></inline-formula> at a frequency of 10 to 20 Hz. Based on <inline-formula><mml:math id="M63" display="inline"><mml:mi>w</mml:mi></mml:math></inline-formula>, the opening and closing of two fast-response sampling valves are controlled in quasi-real time. Any bias in the vertical wind velocity must therefore be removed before activating the valves <xref ref-type="bibr" rid="bib1.bibx44" id="paren.21"/>. When there is an updraft eddy and <inline-formula><mml:math id="M64" display="inline"><mml:mi>w</mml:mi></mml:math></inline-formula> is above a certain threshold <inline-formula><mml:math id="M65" display="inline"><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, air is collected and accumulated in an updraft reservoir, whereas air is collected in a separate downdraft reservoir when <inline-formula><mml:math id="M66" display="inline"><mml:mi>w</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M67" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M68" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:msub><mml:mi>w</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d2e1109">The range of wind speeds <inline-formula><mml:math id="M69" display="inline"><mml:mrow><mml:mo>[</mml:mo><mml:mo>-</mml:mo><mml:msub><mml:mi>w</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>:</mml:mo><mml:msub><mml:mi>w</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> where no air is collected is called the deadband. Under ideal conditions, the mean vertical wind speed <inline-formula><mml:math id="M70" display="inline"><mml:mover accent="true"><mml:mi>w</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula> over a sampling period of, for example, 30 or 60 min is zero and defines the center of the deadband. The deadband width can be constant or dynamically adjusted in relation to the standard deviation of the vertical wind speed <inline-formula><mml:math id="M71" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">w</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> so that <inline-formula><mml:math id="M72" display="inline"><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M73" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M74" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi>w</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:mi mathvariant="italic">δ</mml:mi><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">w</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx44" id="paren.22"/>. The larger the <inline-formula><mml:math id="M75" display="inline"><mml:mi mathvariant="italic">δ</mml:mi></mml:math></inline-formula>, the greater the concentration difference between the updraft and downdraft reservoirs, reducing the relative measurement uncertainty <xref ref-type="bibr" rid="bib1.bibx44" id="paren.23"/>. In addition, a larger deadband reduces the switching frequency of the sampling valves, thereby increasing their lifetime <xref ref-type="bibr" rid="bib1.bibx44" id="paren.24"/>. However, this also reduces the fraction of time during which air is collected, which reduces the sample volume and the statistical significance. A compromise between a high concentration difference, a sufficient sample volume, and good representativity has to be found <xref ref-type="bibr" rid="bib1.bibx7" id="paren.25"/>. Since the requirement <inline-formula><mml:math id="M76" display="inline"><mml:mover accent="true"><mml:mi>w</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula> <inline-formula><mml:math id="M77" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0 can be violated, particularly in urban environments with complex airflow, and since the actual value of <inline-formula><mml:math id="M78" display="inline"><mml:mover accent="true"><mml:mi>w</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula> is not known before the end of the sampling period, two options to trigger the valves based on vertical wind were implemented in this study (see Sect. <xref ref-type="sec" rid="Ch1.S4.SS1"/>).</p>
      <p id="d2e1245">The flow rate into the two reservoirs is always zero when the valves are closed and constant when they are open. This relaxes the high technical requirements of the true eddy accumulation method proposed by <xref ref-type="bibr" rid="bib1.bibx11" id="text.26"/>, where the sampling rate is adjusted in quasi-real time in relation to the magnitude of the vertical wind velocity (for a detailed description, see <xref ref-type="bibr" rid="bib1.bibx47" id="altparen.27"/>, and <xref ref-type="bibr" rid="bib1.bibx13" id="altparen.28"/>). However, the constant flow rate prevents a direct assessment of the mean vertical turbulent flux of a trace gas <inline-formula><mml:math id="M79" display="inline"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mi mathvariant="normal">c</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. With REA, <inline-formula><mml:math id="M80" display="inline"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mi mathvariant="normal">c</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is calculated according to Eq. (<xref ref-type="disp-formula" rid="Ch1.E1"/>) from the mean concentration difference between the updraft and the downdraft sample <inline-formula><mml:math id="M81" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>c</mml:mi></mml:mrow></mml:math></inline-formula>, the standard deviation of the vertical wind speed <inline-formula><mml:math id="M82" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">w</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, the mean molar air density <inline-formula><mml:math id="M83" display="inline"><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi mathvariant="normal">m</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula>, and an empirical coefficient <inline-formula><mml:math id="M84" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula>.

          <disp-formula id="Ch1.E1" content-type="numbered"><label>1</label><mml:math id="M85" display="block"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mi mathvariant="normal">c</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mi mathvariant="italic">β</mml:mi><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">w</mml:mi></mml:msub><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi mathvariant="normal">m</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mfenced close=")" open="("><mml:mrow><mml:msup><mml:mi>c</mml:mi><mml:mo>↑</mml:mo></mml:msup><mml:mo>-</mml:mo><mml:msup><mml:mi>c</mml:mi><mml:mo>↓</mml:mo></mml:msup></mml:mrow></mml:mfenced><mml:mo>=</mml:mo><mml:mi mathvariant="italic">β</mml:mi><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">w</mml:mi></mml:msub><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi mathvariant="normal">m</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>c</mml:mi></mml:mrow></mml:math></disp-formula></p>
      <p id="d2e1390">The proportionality factor <inline-formula><mml:math id="M86" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula> depends on the joint probability distribution of variations in the vertical wind velocity and the trace gas concentration <xref ref-type="bibr" rid="bib1.bibx39" id="paren.29"/>. Without a deadband and under an ideal joint Gaussian distribution of <inline-formula><mml:math id="M87" display="inline"><mml:mi>w</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M88" display="inline"><mml:mi>c</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M89" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula> is 0.627 <xref ref-type="bibr" rid="bib1.bibx60 bib1.bibx1" id="paren.30"/>, but the dependence of <inline-formula><mml:math id="M90" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula> on the prevailing atmospheric conditions; the deadband width; and, eventually, the scalar, e.g., the trace gas concentration, itself adds uncertainty into the calculated flux <xref ref-type="bibr" rid="bib1.bibx47" id="paren.31"/>. <xref ref-type="bibr" rid="bib1.bibx19" id="text.32"/> showed that, with a deadband dynamically adjusted based on the standard deviation of the vertical wind velocity, <inline-formula><mml:math id="M91" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula> does not depend on the atmospheric stability, allowing the use of a constant value in flux calculations. Consequently, assuming similarity in the turbulent exchange of two quantities, <inline-formula><mml:math id="M92" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula> can be determined with Eq. (<xref ref-type="disp-formula" rid="Ch1.E1"/>) from a scalar where the flux is known from EC measurements, e.g., temperature or <inline-formula><mml:math id="M93" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx44" id="paren.33"/>.</p>
      <p id="d2e1473">Estimating the ff<inline-formula><mml:math id="M94" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> difference between updraft and downdraft reservoirs based on <inline-formula><mml:math id="M95" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> analyses of REA sample pairs and assuming scalar similarity between <inline-formula><mml:math id="M96" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M97" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, Eq. (<xref ref-type="disp-formula" rid="Ch1.E1"/>) allows us to determine the fossil contribution to a total <inline-formula><mml:math id="M98" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> flux:

          <disp-formula id="Ch1.E2" content-type="numbered"><label>2</label><mml:math id="M99" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">ffCO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">ffCO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>

        In this paper, only the concentration differences (right-hand side of Eq. <xref ref-type="disp-formula" rid="Ch1.E2"/>) and their uncertainties are analyzed. The observation-based ff<inline-formula><mml:math id="M100" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes, which can be obtained by multiplying the <inline-formula><mml:math id="M101" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">ffCO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:mrow></mml:math></inline-formula> ratio of the REA samples with <inline-formula><mml:math id="M102" display="inline"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> from EC measurements, will be presented in a follow-up work.</p>
      <p id="d2e1646">It should be noted that Eq. (<xref ref-type="disp-formula" rid="Ch1.E2"/>) is unstable for <inline-formula><mml:math id="M103" display="inline"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> and/or <inline-formula><mml:math id="M104" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:mrow></mml:math></inline-formula> close to zero. In this case, a proxy other than <inline-formula><mml:math id="M105" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is needed, e.g., <inline-formula><mml:math id="M106" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>. Moreover, like any other method based on the eddy covariance principle, REA only provides reasonable estimates of the mean vertical turbulent flux if the micro-meteorological conditions are stationary and if turbulence is well developed during the sampling period <xref ref-type="bibr" rid="bib1.bibx16" id="paren.34"/>. If a temporal change in concentrations below the measurement height causes a significant storage flux, the measured turbulent fluxes are not representative of the respective surface fluxes at the time <xref ref-type="bibr" rid="bib1.bibx8 bib1.bibx2" id="paren.35"/>. Further, if vertical advection leads to significant flux components due to non-turbulent vertical transport, this cannot be properly captured by eddy covariance and the REA approach  <xref ref-type="bibr" rid="bib1.bibx16" id="paren.36"/>. This implies the consideration of various criteria when selecting suitable samples in any application (see Sect. <xref ref-type="sec" rid="Ch1.S4.SS4"/>).</p>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title><sup>14</sup>C-based fossil fuel CO<sub>2</sub> estimation</title>
      <p id="d2e1737">In determining the contribution of fossil fuel emissions to a measured <inline-formula><mml:math id="M109" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> signal, <inline-formula><mml:math id="M110" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula> has turned out to be an important tracer. The radioactive carbon isotope has a half-life of 5730 years. Consequently, the millions-of-years-old fossil fuels are <inline-formula><mml:math id="M111" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula>-free; hence, <inline-formula><mml:math id="M112" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> emitted by fossil fuel combustion (ff<inline-formula><mml:math id="M113" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>) dilutes the atmospheric <inline-formula><mml:math id="M114" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula> ratio. Due to the low <inline-formula><mml:math id="M115" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula> abundance, the specific activity of a reservoir or sample is commonly given as the relative deviation (in ‰) from the absolute specific activity of the  radiocarbon standard <inline-formula><mml:math id="M116" display="inline"><mml:mrow><mml:msub><mml:mi>A</mml:mi><mml:mi mathvariant="normal">ABS</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M117" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.2261 Bq gC<sup>−1</sup> (Eq. <xref ref-type="disp-formula" rid="Ch1.E3"/>) <xref ref-type="bibr" rid="bib1.bibx49" id="paren.37"/>. This is commonly denoted as <inline-formula><mml:math id="M119" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> but is abbreviated to <inline-formula><mml:math id="M120" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup></mml:mrow></mml:mrow></mml:math></inline-formula> in this work to improve the readability of the following equations.

          <disp-formula id="Ch1.E3" content-type="numbered"><label>3</label><mml:math id="M121" display="block"><mml:mrow><mml:msup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>A</mml:mi><mml:mi mathvariant="normal">SN</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>A</mml:mi><mml:mi mathvariant="normal">ABS</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:mfenced><mml:mo>×</mml:mo><mml:mn mathvariant="normal">1000</mml:mn></mml:mrow></mml:math></disp-formula>

        <inline-formula><mml:math id="M122" display="inline"><mml:mrow><mml:msub><mml:mi>A</mml:mi><mml:mi mathvariant="normal">SN</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the <inline-formula><mml:math id="M123" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula> sample activity <inline-formula><mml:math id="M124" display="inline"><mml:mrow><mml:msub><mml:mi>A</mml:mi><mml:mi mathvariant="normal">S</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> normalized to the postulated mean <inline-formula><mml:math id="M125" display="inline"><mml:mi mathvariant="italic">δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M126" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula> value of terrestrial wood of <inline-formula><mml:math id="M127" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>25 ‰ to correct for isotopic fractionation due to biological or physical processes during the sample formation and the measurement routine <xref ref-type="bibr" rid="bib1.bibx49" id="paren.38"/>:

          <disp-formula id="Ch1.E4" content-type="numbered"><label>4</label><mml:math id="M128" display="block"><mml:mrow><mml:msub><mml:mi>A</mml:mi><mml:mi mathvariant="normal">SN</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>A</mml:mi><mml:mi mathvariant="normal">S</mml:mi></mml:msub><mml:mfenced close=")" open="("><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mfenced open="(" close=")"><mml:mrow><mml:mn mathvariant="normal">25</mml:mn><mml:mo>+</mml:mo><mml:mi mathvariant="italic">δ</mml:mi><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:mrow></mml:mfenced></mml:mrow><mml:mn mathvariant="normal">1000</mml:mn></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula></p>
      <p id="d2e2037">Following the general approach of <xref ref-type="bibr" rid="bib1.bibx54" id="text.39"/> and <xref ref-type="bibr" rid="bib1.bibx32" id="text.40"/>, any measured atmospheric <inline-formula><mml:math id="M129" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> signal can, analogously to the total <inline-formula><mml:math id="M130" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration <inline-formula><mml:math id="M131" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">meas</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, be expressed as the sum of a background (bg), a fossil fuel (ff), a biofuel (bf), a nuclear (nuc), a stratospheric (strato), a respiratory (resp), a photosynthetic (photo), and an oceanic (oc) component:

              <disp-formula specific-use="gather" content-type="numbered"><mml:math id="M132" display="block"><mml:mtable rowspacing="4.267913pt" displaystyle="true"><mml:mlabeledtr id="Ch1.E5"><mml:mtd><mml:mtext>5</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">meas</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:munder><mml:mo movablelimits="false">∑</mml:mo><mml:mi>i</mml:mi></mml:munder><mml:msub><mml:mi>c</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E6"><mml:mtd><mml:mtext>6</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mtable class="array" columnalign="left"><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">meas</mml:mi></mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup></mml:mrow><mml:mo>=</mml:mo><mml:munder><mml:mo movablelimits="false">∑</mml:mo><mml:mi>i</mml:mi></mml:munder><mml:msub><mml:mi>c</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>i</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mtext>bg, ff, bf, nuc, strato, resp, photo, oc</mml:mtext><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula></p>
      <p id="d2e2170">On a local scale, as during REA sampling, it can be assumed that two air parcels differ only in terms of their fossil fuel, biofuel, respiration, and photosynthesis components, while the impact of the other, more distant sinks and sources is the same. Since biofuels and respiration have a similar <inline-formula><mml:math id="M133" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> signature, they cannot be distinguished by radiocarbon analysis alone and are therefore summarized in the following as non-fossil (nf) <inline-formula><mml:math id="M134" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> emissions, with respiration being by far the largest contributor. Thus, the concentration differences between the updraft (<inline-formula><mml:math id="M135" display="inline"><mml:mo lspace="0mm">↑</mml:mo></mml:math></inline-formula>) and the downdraft (<inline-formula><mml:math id="M136" display="inline"><mml:mo lspace="0mm">↓</mml:mo></mml:math></inline-formula>) reservoir of an REA measurement can be expressed in the following way:

              <disp-formula specific-use="gather" content-type="numbered"><mml:math id="M137" display="block"><mml:mtable rowspacing="5.690551pt" displaystyle="true"><mml:mlabeledtr id="Ch1.E7"><mml:mtd><mml:mtext>7</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">meas</mml:mi><mml:mo>↑</mml:mo></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">meas</mml:mi><mml:mo>↓</mml:mo></mml:msubsup><mml:mo>=</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">ff</mml:mi><mml:mo>↑</mml:mo></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">ff</mml:mi><mml:mo>↓</mml:mo></mml:msubsup></mml:mrow></mml:mfenced><mml:mo>+</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mo>↑</mml:mo></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mo>↓</mml:mo></mml:msubsup></mml:mrow></mml:mfenced><mml:mo>+</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">photo</mml:mi><mml:mo>↑</mml:mo></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">photo</mml:mi><mml:mo>↓</mml:mo></mml:msubsup></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E8"><mml:mtd><mml:mtext>8</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mtable rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">meas</mml:mi><mml:mo>↑</mml:mo></mml:msubsup><mml:msup><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">meas</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup><mml:mo>↑</mml:mo></mml:msup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">meas</mml:mi><mml:mo>↓</mml:mo></mml:msubsup><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">meas</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup><mml:mo>↓</mml:mo></mml:msup><mml:mo>=</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">ff</mml:mi><mml:mo>↑</mml:mo></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">ff</mml:mi><mml:mo>↓</mml:mo></mml:msubsup></mml:mrow></mml:mfenced><mml:mo>⋅</mml:mo><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">ff</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mo>+</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mo>↑</mml:mo></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mo>↓</mml:mo></mml:msubsup></mml:mrow></mml:mfenced><mml:mo>⋅</mml:mo><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup><mml:mo>+</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">photo</mml:mi><mml:mo>↑</mml:mo></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">photo</mml:mi><mml:mo>↓</mml:mo></mml:msubsup></mml:mrow></mml:mfenced><mml:mo>⋅</mml:mo><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">photo</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula></p>
      <p id="d2e2447">Combining Eq. (<xref ref-type="disp-formula" rid="Ch1.E7"/>) and Eq. (<xref ref-type="disp-formula" rid="Ch1.E8"/>), the difference in <inline-formula><mml:math id="M138" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">ff</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> between updraft and downdraft reservoirs can be estimated via

          <disp-formula id="Ch1.E9" content-type="numbered"><label>9</label><mml:math id="M139" display="block"><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">ff</mml:mi><mml:mo>↑</mml:mo></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">ff</mml:mi><mml:mo>↓</mml:mo></mml:msubsup><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">photo</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">ff</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:mfrac></mml:mstyle><mml:mo mathsize="1.1em">[</mml:mo><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">meas</mml:mi><mml:mo>↑</mml:mo></mml:msubsup><mml:mo>(</mml:mo><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">photo</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup><mml:mo>-</mml:mo><mml:msup><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">meas</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup><mml:mo>↑</mml:mo></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mo>-</mml:mo><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">meas</mml:mi><mml:mo>↓</mml:mo></mml:msubsup><mml:mo>(</mml:mo><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">photo</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup><mml:mo>-</mml:mo><mml:msup><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">meas</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup><mml:mo>↓</mml:mo></mml:msup><mml:mo>)</mml:mo><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mo>↑</mml:mo></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mo>↓</mml:mo></mml:msubsup><mml:mo>)</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">photo</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup><mml:mo>)</mml:mo><mml:mo mathsize="1.1em">]</mml:mo><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

        The corresponding uncertainty is derived according to Gauss' law of error propagation.</p>
      <p id="d2e2636">Since fossil fuel emissions do not contain any <inline-formula><mml:math id="M140" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M141" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">ff</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> is, by definition, exactly <inline-formula><mml:math id="M142" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>1000 ‰. On the contrary, biogenic signatures are heterogeneous and much more uncertain (e.g., <xref ref-type="bibr" rid="bib1.bibx41 bib1.bibx32" id="altparen.41"/>). To estimate <inline-formula><mml:math id="M143" display="inline"><mml:mrow><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">ff</mml:mi><mml:mo>↑</mml:mo></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">ff</mml:mi><mml:mo>↓</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> (in the following denoted as <inline-formula><mml:math id="M144" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M145" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>), it is therefore necessary to make assumptions about <inline-formula><mml:math id="M146" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">photo</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M147" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M148" display="inline"><mml:mrow><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mo>↑</mml:mo></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mo>↓</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d2e2763">Since the <inline-formula><mml:math id="M149" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula> notation accounts for mass-dependent isotopic fractionation (Eq. <xref ref-type="disp-formula" rid="Ch1.E4"/>), <inline-formula><mml:math id="M150" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">photo</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> corresponds to the <inline-formula><mml:math id="M151" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula> signature of the photosynthesized atmospheric <inline-formula><mml:math id="M152" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. For our measurements of local <inline-formula><mml:math id="M153" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes close to the tall tower, <inline-formula><mml:math id="M154" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">photo</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> is therefore best approximated by the measured atmospheric signature <inline-formula><mml:math id="M155" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">meas</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula>. As there are always two flasks per REA run, the average of the up and down flasks is chosen: <inline-formula><mml:math id="M156" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">photo</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup><mml:mo>≈</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn><mml:mo>⋅</mml:mo><mml:mo>(</mml:mo><mml:msup><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">meas</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup><mml:mo>↑</mml:mo></mml:msup><mml:mo>+</mml:mo><mml:msup><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">meas</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup><mml:mo>↓</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>). However, due to temporal variability, the <inline-formula><mml:math id="M157" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">photo</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> uncertainty is larger than the measurement uncertainty (<inline-formula><mml:math id="M158" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 1.8 ‰; see Appendix <xref ref-type="sec" rid="App1.Ch1.S4"/>) and is therefore set to 10 ‰.</p>
      <p id="d2e2915">Non-fossil <inline-formula><mml:math id="M159" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (from autotrophic and heterotrophic respiration and, to a lesser extent, biofuels) is generally more enriched in <inline-formula><mml:math id="M160" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> because heterotrophically respired <inline-formula><mml:math id="M161" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M162" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> from biofuels were taken up by the biosphere several years to decades ago. At that time, the atmospheric <inline-formula><mml:math id="M163" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> was higher due to <inline-formula><mml:math id="M164" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> released during nuclear bomb tests in the 1950s–1960s, which constituted the dominant contribution up to the 2000s <xref ref-type="bibr" rid="bib1.bibx40" id="paren.42"/>. Since then, the strongest component of the ongoing atmospheric <inline-formula><mml:math id="M165" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> decline has been the emission of fossil fuel <inline-formula><mml:math id="M166" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx29 bib1.bibx54" id="paren.43"/>. In total, the <inline-formula><mml:math id="M167" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> signature of respiration was found to be larger than atmospheric values by a few tens of permil <xref ref-type="bibr" rid="bib1.bibx42 bib1.bibx5" id="paren.44"><named-content content-type="pre">e.g.,</named-content></xref>. Following <xref ref-type="bibr" rid="bib1.bibx32" id="text.45"/>, an enrichment of the respiration-dominated <inline-formula><mml:math id="M168" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> of 25 <inline-formula><mml:math id="M169" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 12 ‰ is assumed in this study. The atmospheric signature during <inline-formula><mml:math id="M170" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> uptake of the biospheric <inline-formula><mml:math id="M171" display="inline"><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">atmo</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula> is estimated by the mean <inline-formula><mml:math id="M172" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">meas</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> value in summer, when photosynthesis is most pronounced.</p>
      <p id="d2e3102">The third unknown is the difference <inline-formula><mml:math id="M173" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M174" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M175" display="inline"><mml:mrow><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mo>↑</mml:mo></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mo>↓</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>. This can be estimated based on the mean measured total <inline-formula><mml:math id="M176" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> differences between up and down flasks and the assumption that, in an urban setting, there is always a fossil contribution. Since this is only a very rough and upper estimate, a relative uncertainty of 100 % is reasonable.</p>
      <p id="d2e3158">The assumptions regarding <inline-formula><mml:math id="M177" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">photo</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M178" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M179" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, as well as the specific values used to calculate <inline-formula><mml:math id="M180" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M181" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> from the REA flasks of the first measurement campaign in Zurich, are summarized in Table <xref ref-type="table" rid="T1"/>. Although <inline-formula><mml:math id="M182" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">photo</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M183" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M184" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are not well known, the uncertainty in the <inline-formula><mml:math id="M185" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M186" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> estimates is dominated by the <inline-formula><mml:math id="M187" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> measurement uncertainty, which currently leads to an inherent <inline-formula><mml:math id="M188" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M189" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> uncertainty of 0.7 ppm at least and 1.2 ppm on average. Details are given in Appendix <xref ref-type="sec" rid="App1.Ch1.S4"/>.</p>

<table-wrap id="T1"><label>Table 1</label><caption><p id="d2e3318">Variables used to estimate <inline-formula><mml:math id="M190" display="inline"><mml:mrow><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">ff</mml:mi><mml:mo>↑</mml:mo></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">ff</mml:mi><mml:mo>↓</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M191" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M192" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M193" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. <inline-formula><mml:math id="M194" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>i</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> denotes the <inline-formula><mml:math id="M195" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M196" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> values of fossil fuels (ff), photosynthetic (photo) and non-fossil (nf) <inline-formula><mml:math id="M197" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, and flask measurements (meas). <inline-formula><mml:math id="M198" display="inline"><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">meas</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula> <inline-formula><mml:math id="M199" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M200" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.5</mml:mn><mml:mo>⋅</mml:mo><mml:mo>(</mml:mo><mml:msup><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">meas</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup><mml:mo>↑</mml:mo></mml:msup><mml:mo>+</mml:mo><mml:msup><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">meas</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup><mml:mo>↓</mml:mo></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> denotes the mean of the updraft and downdraft samples, which is different for each REA run. The atmospheric signature during <inline-formula><mml:math id="M201" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> uptake of the biosphere <inline-formula><mml:math id="M202" display="inline"><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">atmo</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula> is estimated by the mean <inline-formula><mml:math id="M203" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">meas</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> value in summer (July to September 2022 in the case of the Zurich campaign). Also given are the specific values derived for the first measurement campaign in Zurich.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Variable</oasis:entry>
         <oasis:entry colname="col2">Unit</oasis:entry>
         <oasis:entry colname="col3">Approximation</oasis:entry>
         <oasis:entry colname="col4">Zurich value</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"><inline-formula><mml:math id="M204" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">ff</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">‰</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M205" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>1000</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M206" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>1000</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"><inline-formula><mml:math id="M207" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">photo</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">‰</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M208" display="inline"><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">meas</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M209" display="inline"><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">meas</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula> <inline-formula><mml:math id="M210" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 10</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"><inline-formula><mml:math id="M211" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">‰</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M212" display="inline"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">atmo</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:mn mathvariant="normal">25</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">9 <inline-formula><mml:math id="M213" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 16</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M214" display="inline"><mml:mrow><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mo>↑</mml:mo></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mo>↓</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">ppm</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M215" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M216" display="inline"><mml:mover accent="true"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">5 <inline-formula><mml:math id="M217" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 5</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</sec>
<sec id="Ch1.S4">
  <label>4</label><title>Setup of the REA system</title>
      <p id="d2e3768">The relaxed eddy accumulation (REA) flask sampling system consists of an eddy covariance (EC) system with a 3D ultrasonic anemometer and an integrated open-path gas analyzer (IRGASON, Campbell Scientific Inc., Logan, UT, USA); two fast-response valves controlled by a solid-state DC control module (SDM-CD8S, Campbell Scientific Inc., Logan, UT, USA); a data logger (CR6, Campbell Scientific Inc., Logan, UT, USA); and an extension of a regular 24-port ICOS (Integrated Carbon Observation System) automated flask sampler, described, for example, in <xref ref-type="bibr" rid="bib1.bibx30" id="text.46"/> (Fig. <xref ref-type="fig" rid="F1"/>). This allows the collection of updraft and downdraft air samples (Sect. <xref ref-type="sec" rid="Ch1.S2"/>) in glass flasks for subsequent laboratory analysis.</p>

      <fig id="F1" specific-use="star"><label>Figure 1</label><caption><p id="d2e3780">Schematic setup of the REA flask sampling system. P<sub>a</sub>–P<sub>c</sub> refers to the pumps that transfer the air from the inlets to the flask sampler and evacuate the buffers after sample transfer. p<sub>1</sub>–p<sub>4</sub> indicates pressure sensors. Blue components at the bottom of the diagram depict the general wiring for data transfer and communication between the data logger and the sampler computer. The green arrows and the filled, unfilled, and hatched circles indicate the air flow and the position of the valves when sampling for buffer set 1. Details of the loop systems are shown in Fig. <xref ref-type="fig" rid="F2"/>.</p></caption>
        <graphic xlink:href="https://amt.copernicus.org/articles/18/5349/2025/amt-18-5349-2025-f01.png"/>

      </fig>

      <p id="d2e3827">As depicted in Fig. <xref ref-type="fig" rid="F1"/>, there are two inlets, one for updraft conditions and one for downdraft conditions. They are about 20 cm away from the  center of the ultrasonic anemometer and are horizontally separated from each other by about 5 cm. The collection of air is controlled by the two solenoid valves located approximately 30 cm behind the inlets. They respond to the data logger's 20 Hz signal, which is based on the vertical wind velocity measurements of the IRGASON (Sect. <xref ref-type="sec" rid="Ch1.S4.SS1"/>). This signal is also sent to the sampler computer, which controls the extended flask sampler. Two pumps (P<sub>a, up</sub> and P<sub>a, down</sub> in Fig. <xref ref-type="fig" rid="F1"/>) transfer the sampled air into two separate 50 L cylinders, which are called buffers in the following. The so-called loop systems (Sect. <xref ref-type="sec" rid="Ch1.S4.SS2"/>) avoid flow rate fluctuations during sampling and non-sampling to ensure constant flow rates despite high-frequency switching. Excess air from the updraft and downdraft sides is released through one common outflow. After a successful sampling event, for which both 50 L buffers need to have a pressure between 1.2 and 1.6 bar (Sect. <xref ref-type="sec" rid="Ch1.S4.SS3"/>), the samples are dried and transferred into 3 L glass flasks (pump P<sub>b</sub>), and the buffers are evacuated again (pump P<sub>c</sub>). Since this takes about 45 min, there is a second pair of buffers that can be filled in the meantime. This allows for a nearly continuous sampling routine. The flask pairs can be sent to the laboratory or re-sampled if, for example, the sampling conditions did not fulfill the requirements (Sect. <xref ref-type="sec" rid="Ch1.S4.SS4"/>). In addition, a third line from the tower top directly to the flask sampler enables a simultaneous sampling of flasks with a regular <inline-formula><mml:math id="M226" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:math></inline-formula> filling <xref ref-type="bibr" rid="bib1.bibx30" id="paren.47"/>, which can be used for quality control tests (Sect. <xref ref-type="sec" rid="Ch1.S5.SS3.SSS1"/>). In the following, the individual steps of collecting REA flasks are described in more detail. The following terminology is used: REA run denotes the REA sampling event of usually 1 h; REA ID denotes the unique, consecutively assigned number for each REA run; sampling mode denotes the state of the updraft or downdraft line when air is collected, i.e, when the vertical wind is above or below the deadband; and standby mode denotes the state of the updraft or downdraft line when no air is collected, i.e, when the vertical wind is below or above or within the deadband. A photo of the inlets and the extended flask sampler and specifications of the components of the system are shown in Fig. <xref ref-type="fig" rid="F3"/> and Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/>.</p>
<sec id="Ch1.S4.SS1">
  <label>4.1</label><title>Conditional collection of air</title>
      <p id="d2e3921">During an REA run, the data logger controls the opening and closing of the solenoid valves at the inlets according to the in situ measurements of the vertical wind velocity. Depending on the definition of the deadband (Sect. <xref ref-type="sec" rid="Ch1.S2"/>), flags are assigned to each 20 Hz wind measurement, denoting the status of the two valves in the current and previous time step. If the two values are different, the corresponding valve is switched. For quality control, the flags, called REA flags in the following, can be used to estimate the sample <inline-formula><mml:math id="M227" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations from high-frequency in situ concentration measurements (see Sect. <xref ref-type="sec" rid="Ch1.S5.SS2"/> and <xref ref-type="sec" rid="Ch1.S5.SS3.SSS2"/>).</p>
      <p id="d2e3941">Table <xref ref-type="table" rid="T2"/> shows the possible deadband settings implemented in the logger program, which can be selected depending on the scientific question and site-specific requirements.</p>

<table-wrap id="T2" specific-use="star"><label>Table 2</label><caption><p id="d2e3949">Variables in the logger program that determine the deadband of the REA run.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Variable</oasis:entry>
         <oasis:entry colname="col2">Values</oasis:entry>
         <oasis:entry colname="col3">Description</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">REA_DeadBandWidth</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M228" display="inline"><mml:mo>≥</mml:mo></mml:math></inline-formula> 0</oasis:entry>
         <oasis:entry colname="col3">Deadband width <inline-formula><mml:math id="M229" display="inline"><mml:mi mathvariant="italic">δ</mml:mi></mml:math></inline-formula> that, multiplied by the standard deviation of the vertical wind <inline-formula><mml:math id="M230" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">w</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>,</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">determines the width of the deadband.</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">REA_FreezeStatistics</oasis:entry>
         <oasis:entry colname="col2">0</oasis:entry>
         <oasis:entry colname="col3">Dynamic wind statistics: mean and standard deviation of the vertical wind velocity <inline-formula><mml:math id="M231" display="inline"><mml:mover accent="true"><mml:mi>w</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula> and <inline-formula><mml:math id="M232" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">w</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry rowsep="1" colname="col2"/>
         <oasis:entry rowsep="1" colname="col3">calculated from a backward-looking moving-average window.</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">Pre-set wind statistics: <inline-formula><mml:math id="M233" display="inline"><mml:mover accent="true"><mml:mi>w</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula> and <inline-formula><mml:math id="M234" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">w</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are calculated from a certain time period before the sampling start.</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">SYS_MovingBlockDuration</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M235" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 0</oasis:entry>
         <oasis:entry colname="col3">Length of the backward averaging interval in seconds used to calculate <inline-formula><mml:math id="M236" display="inline"><mml:mover accent="true"><mml:mi>w</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula> and <inline-formula><mml:math id="M237" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">w</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">(for both dynamic and pre-set wind statistics).</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d2e4152">It should be noted that the digital output from the IRGASON is delayed by several hundred milliseconds depending on the bandwidth of the low-pass  filter that is applied to the actual 60 Hz measurements. The larger the bandwidth, the smaller the delay, with a minimum delay of 200 ms (20 Hz bandwidth). In addition, there will also be a short delay between the signals being sent, the valves being physically switched, and the air being sucked in due to the slight underpressure in the line. The impact of these delays on the flask concentration differences is analyzed in Sect. <xref ref-type="sec" rid="Ch1.S5.SS2.SSS1"/>.</p>
</sec>
<sec id="Ch1.S4.SS2">
  <label>4.2</label><title>Transfer of collected air into buffers</title>
      <p id="d2e4165">To pump the collected air at a constant flow rate into the respective buffers while ensuring that the system can switch between sampling and standby mode at any time, loop systems (Fig. <xref ref-type="fig" rid="F2"/>) were developed. They consist of a membrane pump that runs continuously, a pressure control valve, a mass flow controller (MFC), and two three-way valves. The technical details of the components are given in Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/>.</p>

      <fig id="F2" specific-use="star"><label>Figure 2</label><caption><p id="d2e4174">Schematic setup of the loop systems indicating the air flow in sampling and standby mode. NC: normally closed (closed in standby mode, open in sampling mode); NO: normally open (open in standby mode, closed in sampling mode); CO: constantly open; MFC: mass flow controller; <inline-formula><mml:math id="M238" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 1.6 bar: pressure control valve.</p></caption>
          <graphic xlink:href="https://amt.copernicus.org/articles/18/5349/2025/amt-18-5349-2025-f02.png"/>

        </fig>

      <p id="d2e4190">When the solenoid valve at the inlet is closed (i.e., in standby mode when no air is sampled), the three-way valves are closed to the outside, causing the air to circulate in two loops. As shown by the red arrows, the air splits behind the pump: one part flows through the MFC and the constantly open (CO) and normally open (NO) positions of the three-way valve connected to the buffer, while the other part flows through the pressure control valve and the second three-way valve until both reach the suction side of the pump again. The air in the intake line between the inlet and the pump does not move. In sampling mode, both three-way valves switch to the normally closed (NC) position. Then, air is pumped through the line and the MFC into the buffer, while excess air leaves the system through the pressure control valve, as indicated by the green arrows. In both modes, the pump is continuously running, and the pressure behind the pump and the flow rate through the loop are constant due to the pressure control valve and the MFC. Thus, in sampling mode, the flow rate into the buffers is approximately constant, and the system is able to switch between sampling and standby mode at any time. The effect of a remaining variability in the flow rates is discussed in Sect. <xref ref-type="sec" rid="Ch1.S5.SS2.SSS3"/>.</p>
      <p id="d2e4196">Each loop system has an internal volume of <inline-formula><mml:math id="M239" display="inline"><mml:mrow><mml:msub><mml:mi>V</mml:mi><mml:mi>l</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M240" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 12.0 <inline-formula><mml:math id="M241" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 1.1 mL, while the volumes of the inlet tubes with length <inline-formula><mml:math id="M242" display="inline"><mml:mrow><mml:msub><mml:mi>l</mml:mi><mml:mi mathvariant="normal">t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and radius <inline-formula><mml:math id="M243" display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mi mathvariant="normal">t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are <inline-formula><mml:math id="M244" display="inline"><mml:mrow><mml:msub><mml:mi>V</mml:mi><mml:mi mathvariant="normal">t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M245" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M246" display="inline"><mml:mrow><mml:mi mathvariant="italic">π</mml:mi><mml:msubsup><mml:mi>r</mml:mi><mml:mi mathvariant="normal">t</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:msub><mml:mi>l</mml:mi><mml:mi mathvariant="normal">t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. The pump flow velocity <inline-formula><mml:math id="M247" display="inline"><mml:mrow><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">pump</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (L min<sup>−1</sup>) depends on the dimensions of the intake lines (longer and thinner tubes have a higher resistance) and the flow rate set at the MFC. The latter is adjusted based on the length of the REA run and the deadband width <inline-formula><mml:math id="M249" display="inline"><mml:mi mathvariant="italic">δ</mml:mi></mml:math></inline-formula>: the shorter the REA run and the larger the deadband width, the larger the required flow rate into the buffers. Consequently, an air parcel needs the time

            <disp-formula id="Ch1.E10" content-type="numbered"><label>10</label><mml:math id="M250" display="block"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>V</mml:mi><mml:mi mathvariant="normal">l</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi>V</mml:mi><mml:mi mathvariant="normal">t</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mo>/</mml:mo><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">pump</mml:mi></mml:msub></mml:mrow></mml:math></disp-formula>

          from the inlet to the buffer. We refer to <inline-formula><mml:math id="M251" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> as the “rinse time” in the following because it is the exact amount of time by which sampling needs to be delayed artificially in order to avoid sampling air from before the event. For this purpose, the valves at the buffers remain closed for the first <inline-formula><mml:math id="M252" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> seconds in sampling mode so that the residual air is released through the outflow. On the contrary, the pump stays on, and all valves remain open for an additional <inline-formula><mml:math id="M253" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> seconds after the end of the sampling period so that all sample air remaining in the tubes is transferred into the buffers. Due to the site-specific lengths of the intake lines, <inline-formula><mml:math id="M254" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> must be individually calculated and adjusted in the sampler software. As shown in Sect. <xref ref-type="sec" rid="Ch1.S5.SS1"/> and <xref ref-type="sec" rid="Ch1.S5.SS2.SSS2"/>, calculated values agree well with measurements of the travel time of a <inline-formula><mml:math id="M255" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> pulse, and uncertainties in the flask concentrations resulting from the uncertainty of <inline-formula><mml:math id="M256" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are negligible.</p>
</sec>
<sec id="Ch1.S4.SS3">
  <label>4.3</label><title>Transfer of accumulated air into glass flasks</title>
      <p id="d2e4429">After the sampling period, the accumulated air is transferred from the buffers into 3 L glass flasks in the flask sampler. Thereby, it is dried to a dew point of approximately <inline-formula><mml:math id="M257" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>40 °C. To (almost) completely replace the initial air content of a flask with the sample air from the buffers, the flask volume is flushed 10 times at atmospheric pressure. Then the flask is filled up to 2 bar. As the performance of the sampler transfer pump does not allow us to use the entire sample volume in the buffers, a minimal sample amount of 60 L is desired, corresponding to a pressure of 1.2 bar in the buffers. Excess air is discarded when the buffers are evacuated. At the same time, the maximum pressure at which the pumps in the loop systems can be operated is 1.6 bar, and so an REA run is automatically stopped when either buffer reaches this threshold. Consequently, an REA sampling event is only successful if the pressures of the updraft and downdraft buffers are between 1.2 and 1.6 bar at the end of sampling.</p>
</sec>
<sec id="Ch1.S4.SS4">
  <label>4.4</label><title>Sample selection for laboratory analysis</title>
      <p id="d2e4447">The REA flasks are analyzed with gas chromatography for <inline-formula><mml:math id="M258" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M259" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M260" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M261" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M262" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">SF</mml:mi><mml:mn mathvariant="normal">6</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M263" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> at the ICOS Flask and Calibration Laboratory (FCL) in Jena, Germany. To measure <inline-formula><mml:math id="M264" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, the flasks are sent to the ICOS Central Radiocarbon Laboratory (CRL) in Heidelberg. There, the <inline-formula><mml:math id="M265" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is extracted from the remaining air sample and catalytically reduced to graphite <xref ref-type="bibr" rid="bib1.bibx31" id="paren.48"/>. The graphite targets are then analyzed for the <inline-formula><mml:math id="M266" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula> ratio with an accelerator mass spectrometer at the Curt-Engelhorn-Centre Archaeometry in Mannheim, Germany. Since the measurement process is complex and because funding is limited, a thorough selection of appropriate samples is necessary. Several criteria are important to consider.</p>
      <p id="d2e4561">First, it must be ensured that there were no technical problems with the IRGASON or the flask sampler, i.e., that the <inline-formula><mml:math id="M267" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> signal strength of the IRGASON was above 90 %, that the valves were switching, that the flow rate into the buffers was approximately constant, and that the horizontal wind direction was not from sectors with known flow distortion effects of the ultrasonic anemometer or the tower structure. Second, the assumptions made in the EC and REA methods, namely stationarity and well-developed turbulence (Sect. <xref ref-type="sec" rid="Ch1.S2"/>), must have been fulfilled during the sampling period. For this purpose, the 20 Hz measurements of the IRGASON during the sampling period can be analyzed. In this study, the software EddyPro (version 7.0.9, Licor Inc., Lincoln, NE, USA) was used to process the data. Flask samples were discarded if the integral turbulence characteristic test for <inline-formula><mml:math id="M268" display="inline"><mml:mi>w</mml:mi></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx15" id="paren.49"/> was greater than 100 % and if the steady-state test for the covariance between the vertical wind <inline-formula><mml:math id="M269" display="inline"><mml:mi>w</mml:mi></mml:math></inline-formula> and the <inline-formula><mml:math id="M270" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration <xref ref-type="bibr" rid="bib1.bibx15" id="paren.50"/> was greater than 400 %.</p>
      <p id="d2e4609">Depending on the aim of the application, further selection criteria may be considered in the selection of REA flasks. If the objective is a <inline-formula><mml:math id="M271" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula>-based decomposition of total <inline-formula><mml:math id="M272" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> surface fluxes, the fossil fuel <inline-formula><mml:math id="M273" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> differences between updraft and downdraft samples should be greater than the inherent measurement uncertainty of 0.7 ppm that is caused by the current <inline-formula><mml:math id="M274" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> measurement precision (see Appendix <xref ref-type="sec" rid="App1.Ch1.S4"/>). For times during which photosynthesis is expected to be weak, estimates of total <inline-formula><mml:math id="M275" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M276" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> based on the IRGASON measurements are good indicators.</p>
</sec>
<sec id="Ch1.S4.SS5">
  <label>4.5</label><title>Zurich installation</title>
      <p id="d2e4689">The REA system was installed and operated for the first time in Zurich, Switzerland, from July 2022 to April 2023. The IRGASON and REA inlets were mounted on a radio tower of 16.5 m height on top of a 95.3 m tall high-rise residential building (Fig. <xref ref-type="fig" rid="F3"/>). The data loggers, the network devices, and the REA flask sampler were placed in a climate-controlled room on the top floor of the building. The building is surrounded by an industrial sector, railway lines, and a busy commuting road to the north; an urban sector (city center) to the southeast; and a green, less densely populated area with a cemetery to the southwest. Sampling periods of 1 h were chosen to match the current resolution of mesoscale inverse models. The deadband was first used with pre-set wind statistics, i.e., adjusted to the mean and standard  deviation of the vertical wind speed of the preceding 30 min period (Table <xref ref-type="table" rid="T2"/>). In this case, changes in wind statistics during the sampling period often lead to unequal volumes being filled into the updraft and downdraft buffers, and, on average, only every fourth REA sample pair could be successfully transferred into the flask sampler. With a dynamic deadband, implemented and used since the end of October 2022, the success rate increased to about 75 % for the remaining samples. After 12 experimental runs in the beginning of the campaign with varying deadband widths of <inline-formula><mml:math id="M277" display="inline"><mml:mi mathvariant="italic">δ</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M278" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.3, 0.4, or 0.8, the deadband width was always set to <inline-formula><mml:math id="M279" display="inline"><mml:mi mathvariant="italic">δ</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M280" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.7 for the remainder of the campaign. In this case, the solenoid valves switched, on average, 23 <inline-formula><mml:math id="M281" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 11 times per minute, and air was collected around 50 % of the time. To sample sufficient air for filling a flask (Sect. <xref ref-type="sec" rid="Ch1.S4.SS3"/>), the flow rate into the buffers was 4.67 L min<sup>−1</sup>. With an estimated pump flow velocity of 5 <inline-formula><mml:math id="M283" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 1.5 L min<sup>−1</sup> and with 33 m long Synflex tubes with an inner radius of <inline-formula><mml:math id="M285" display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M286" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 2.65 mm connecting the inlets with the loop system, the rinse time was set to 8 s (Eq. <xref ref-type="disp-formula" rid="Ch1.E10"/>). During this rinse time, the flow rate at the MFCs was 3.5 L min<sup>−1</sup>. This implies a slight but negligible underrepresentation of the air sampled during the final 8 s of the sampling period; in future applications, the flow rates during sampling and during the rinse time should be equal. In total, 640 REA runs were started; 300 samples were successfully transferred into flasks; and 103 flask pairs were eventually analyzed for greenhouse gases, including <inline-formula><mml:math id="M288" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>.</p>

      <fig id="F3" specific-use="star"><label>Figure 3</label><caption><p id="d2e4815">Setup of the Zurich campaign. <bold>(a)</bold> Schematic illustration of the building Hardau II with the mast, where measurements were made. Also given are the corresponding heights in meters above sea level (m a.s.l.) and above ground level (m a.g.l.). <inline-formula><mml:math id="M289" display="inline"><mml:mrow><mml:msub><mml:mi>z</mml:mi><mml:mi>H</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> denotes the mean building height within 1.5 km radius, and <inline-formula><mml:math id="M290" display="inline"><mml:mrow><mml:msub><mml:mi>z</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the displacement height according to <xref ref-type="bibr" rid="bib1.bibx23" id="text.51"/>. <bold>(b)</bold> Picture of the IRGASON and the inlets for the relaxed eddy accumulation (REA) system, a multi-compound (MGA<sup>7</sup>) gas analyzer, and an Aerodyne for carbonyl sulfide (COS) measurements. The aforementioned instruments were placed in a room on the top floor of the building and connected by 33 m long Synflex tubings.</p></caption>
          <graphic xlink:href="https://amt.copernicus.org/articles/18/5349/2025/amt-18-5349-2025-f03.jpg"/>

        </fig>

</sec>
</sec>
<sec id="Ch1.S5">
  <label>5</label><title>Quality control of REA flask samples</title>
      <p id="d2e4875">The final setup of the REA flask sampling system, including the chosen materials (Table <xref ref-type="table" rid="TA1"/>) and the flow scheme with the specially designed loop systems (Fig. <xref ref-type="fig" rid="F1"/>), was the result of many preliminary assessments, simulations, tests, and iterative system improvements required to meet the high technical requirements of the REA method and the sample analysis. However, due to non-idealities and uncertainties in the sampling procedure, the concentration of the air that is collected in the updraft and downdraft flasks may deviate from the “true” sample concentration that would result from a certain temporal variation in the gas concentration and the vertical wind velocity. To evaluate the performance of the system, i.e., to check for biases and quantify the uncertainty of the flask concentrations due to the sampling process, several experiments and simulations were performed. This section describes the following:

              <disp-formula specific-use="gather"><mml:math id="M292" display="block"><mml:mtable rowspacing="5.690551pt" displaystyle="true"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mtable class="array" columnalign="left left"><mml:mtr><mml:mtd><mml:mrow><mml:mfenced close="}" open=""><mml:mtable class="array" columnalign="left"><mml:mtr><mml:mtd><mml:mrow><mml:mn mathvariant="normal">5.1</mml:mn><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mtext>quality control tests in</mml:mtext></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mtext>the laboratory ensuring that</mml:mtext></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mtext>the collected air is generally</mml:mtext></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mtext>transferred into the glass</mml:mtext></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mtext>flasks without contamination</mml:mtext></mml:mtd></mml:mtr><mml:mtr><mml:mtd/></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mn mathvariant="normal">5.2</mml:mn><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mtext>simulations using</mml:mtext><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mn mathvariant="normal">20</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mrow class="unit"><mml:mi mathvariant="normal">Hz</mml:mi></mml:mrow></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mtext>in situ measurements in</mml:mtext></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mtext>Zurich to estimate biases and</mml:mtext></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mtext>uncertainties in</mml:mtext><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mtext>flask</mml:mtext></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mtext>measurements due to</mml:mtext></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mtext>non-idealities in the sampling </mml:mtext></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mtext>process</mml:mtext></mml:mtd></mml:mtr></mml:mtable></mml:mfenced></mml:mrow></mml:mtd><mml:mtd><mml:mtable class="array" columnalign="left"><mml:mtr><mml:mtd><mml:mrow><mml:mtext>Table 3:</mml:mtext><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mtext>Mean</mml:mtext></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mtext>uncertainties</mml:mtext></mml:mtd></mml:mtr></mml:mtable></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mtable class="array" columnalign="left"><mml:mtr><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mn mathvariant="normal">5.3</mml:mn><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mtext>quality control tests performed during the Zurich</mml:mtext></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mtext mathvariant="normal">campaign and comparison of measured flask</mml:mtext></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mtext mathvariant="normal">concentrations with in situ measurements to assess</mml:mtext></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mtext mathvariant="normal">the quality of the samples collected in Zurich.</mml:mtext></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

        The focus was on the uncertainty in the <inline-formula><mml:math id="M293" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration differences between updraft and downdraft flasks (<inline-formula><mml:math id="M294" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M295" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>) rather than on absolute concentrations because only the concentration differences are needed to calculate fluxes (Eq. <xref ref-type="disp-formula" rid="Ch1.E1"/>). Moreover, the flask concentration differences were comparable with high-frequency in situ <inline-formula><mml:math id="M296" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> measurements of the IRGASON and a multi-compound (MGA<sup>7</sup>) gas analyzer (MIRO Analytical AG, Wallisellen, Switzerland) despite an irregular calibration of the gas analyzers. It must be noted that, when estimating fossil fuel <inline-formula><mml:math id="M298" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> differences, uncertainties due to the sampling process are negligible compared to the <inline-formula><mml:math id="M299" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula> measurement uncertainty (compare Sect. <xref ref-type="sec" rid="Ch1.S3"/> and Appendix <xref ref-type="sec" rid="App1.Ch1.S4"/>).</p>
<sec id="Ch1.S5.SS1">
  <label>5.1</label><title>Quality control tests in the laboratory</title>
      <p id="d2e5126">Several quality control tests were carried out at the ICOS Flask and Calibration Laboratory in Jena to investigate bias or uncertainty due to contamination and memory effects, i.e., the dependence of the measured concentration on the previous sample, for example, due to incomplete evacuation of the buffers. In addition, the rinse time required at the beginning and end of a sampling period was determined by injecting <inline-formula><mml:math id="M300" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> pulses.</p>
      <p id="d2e5140">By sampling gas from a cylinder with a known concentration under sampling conditions as close to reality as possible (for details, see Appendix <xref ref-type="sec" rid="App1.Ch1.S2"/>), it was shown that neither the buffers nor the intake lines or the switching of the valves alter the gas concentrations significantly. As shown in Fig. <xref ref-type="fig" rid="F4"/>, the <inline-formula><mml:math id="M301" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations of test flasks filled with the sampling system using updraft and downdraft intakes, the loop systems, and buffers agree within 1<inline-formula><mml:math id="M302" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula> with each other and with the cylinder concentration and mostly meet the WMO compatibility goal for <inline-formula><mml:math id="M303" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> of 0.1 ppm (WMO recommendation for the compatibility of measurements of greenhouse gases and related tracers; <xref ref-type="bibr" rid="bib1.bibx52" id="altparen.52"/>).</p>

      <fig id="F4"><label>Figure 4</label><caption><p id="d2e5182">Deviation of measured flask sample concentrations from the <inline-formula><mml:math id="M304" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration of the reference cylinder (405.71 <inline-formula><mml:math id="M305" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.01 ppm) that was connected to the fast-response solenoid valves. The gray-shaded area highlights the WMO compatibility goal of 0.1 ppm for <inline-formula><mml:math id="M306" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. Details of the experiments are given in Appendix <xref ref-type="sec" rid="App1.Ch1.S2"/>.</p></caption>
          <graphic xlink:href="https://amt.copernicus.org/articles/18/5349/2025/amt-18-5349-2025-f04.png"/>

        </fig>

      <p id="d2e5223">A memory effect was visible after filling one buffer with pure nitrogen (causing a diluted <inline-formula><mml:math id="M307" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration of 404.6 ppm measured in the flask compared to 405.8 ppm inserted from the cylinder). During regular operation of the system, however, the differences between two consecutive buffer fillings are much smaller. Based on the measurements during the Zurich campaign, the additional uncertainty of the absolute <inline-formula><mml:math id="M308" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration is therefore estimated to be about 0.15 ppm, depending on the <inline-formula><mml:math id="M309" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> difference compared to the previous sample (see Appendix <xref ref-type="sec" rid="App1.Ch1.S2.SS2"/>). The impact on <inline-formula><mml:math id="M310" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M311" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is expected to be even smaller (uncertainty of about 0.02 ppm) since the updraft and downdraft samples are usually affected in a similar way.</p>
      <p id="d2e5278">It was also shown that the time needed to pump an air parcel from the inlet into the buffer as estimated from the flow rates and the volumes of the tubes (Eq. <xref ref-type="disp-formula" rid="Ch1.E10"/>) agrees well (within less than 1.5<inline-formula><mml:math id="M312" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>) with the measured travel time of an artificial <inline-formula><mml:math id="M313" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> pulse (see Appendix <xref ref-type="sec" rid="App1.Ch1.S2.SS3"/>). This confirms the calculation of the rinse time according to Eq. (<xref ref-type="disp-formula" rid="Ch1.E10"/>).</p>
</sec>
<sec id="Ch1.S5.SS2">
  <label>5.2</label><title><inline-formula><mml:math id="M314" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>CO<sub>2</sub> uncertainty simulations</title>
      <p id="d2e5329">The laboratory tests “only” proved the ability to successfully transfer sample air from the REA inlets into the flasks without altering the gas concentration. Several aspects that would affect the measurements in a real REA run, i.e., with a temporally varying gas concentration, were investigated through simulations using the high-frequency <inline-formula><mml:math id="M316" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> measurements of the MGA<sup>7</sup>. For this purpose, the 10 Hz time series of the MGA<sup>7</sup> (available since early August 2022, with a few outages, covering 74 REA sampling periods) was upsampled to 20 Hz and synchronized with the IRGASON data by finding the time lag of maximum correlation between the high-frequency <inline-formula><mml:math id="M319" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> measurements. Mean concentrations of the updraft and the downdraft samples could then be simulated from the high-frequency data using the 20 Hz REA flags (Sect. <xref ref-type="sec" rid="Ch1.S4.SS1"/>). In this section, <inline-formula><mml:math id="M320" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M321" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> uncertainties and potential biases are assessed based on the MGA<sup>7</sup> data. To make the in situ estimates comparable to the air samples that were dried during the transfer into the flasks (compare Sect. <xref ref-type="sec" rid="Ch1.S5.SS3"/>), the measured gas densities were converted into dry air molar fractions (see Appendix <xref ref-type="sec" rid="App1.Ch1.S3.SS1"/>).</p>
<sec id="Ch1.S5.SS2.SSS1">
  <label>5.2.1</label><title><inline-formula><mml:math id="M323" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>CO<sub>2</sub> with delayed collection of air</title>
      <p id="d2e5428">Time lags between a change in the sign of the vertical wind velocity fluctuations <inline-formula><mml:math id="M325" display="inline"><mml:mrow><mml:msup><mml:mi>w</mml:mi><mml:mo>′</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M326" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M327" display="inline"><mml:mrow><mml:mi>w</mml:mi><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>w</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:math></inline-formula> and the actual collection of air in the respective reservoirs are a known source of uncertainty in REA flux measurements <xref ref-type="bibr" rid="bib1.bibx1 bib1.bibx43" id="paren.53"><named-content content-type="pre">e.g.,</named-content></xref>. In the given setup, the IRGASON measures the vertical wind speed at a frequency of 20 Hz so that the maximum delay between the change in wind speed and its detection is 50 ms. As mentioned in Sect. <xref ref-type="sec" rid="Ch1.S4.SS1"/>, the IRGASON output has, at the maximum bandwidth of 20 Hz, a time delay of 200 ms. With a bandwidth of 10 Hz, as used by default in Zurich, there is a 400 ms delay. The response time of the solenoid valves is 50 ms or less (open) or 150 ms or less (closed). Consequently, it is assumed that the collection of air is delayed by up to 500 ms.</p>
      <p id="d2e5471">The effect of a delayed collection of air was investigated by calculating the expected <inline-formula><mml:math id="M328" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> difference between updraft and downdraft samples of the Zurich REA runs based on the 20 Hz REA flags considering different time lags (see Appendix <xref ref-type="sec" rid="App1.Ch1.S3.SS3"/>). As expected, the larger the delay, the smaller the concentration differences as air is “sampled” from within the deadband, while portions of the larger signals are missed. On average, a 500 ms delay reduces <inline-formula><mml:math id="M329" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M330" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> by 0.04 <inline-formula><mml:math id="M331" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.06 ppm. If the delay is 100 ms smaller or larger than expected (i.e., 400 or 600 ms), <inline-formula><mml:math id="M332" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M333" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> changes by less than 0.02 ppm. More results are given in Table <xref ref-type="table" rid="TC2"/>.</p>
</sec>
<sec id="Ch1.S5.SS2.SSS2">
  <label>5.2.2</label><title><inline-formula><mml:math id="M334" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>CO<sub>2</sub> with incorrect rinse time</title>
      <p id="d2e5555">Compared to systems with a single inlet, the direct separation of updraft and downdraft samples close to the ultrasonic anemometer of the IRGASON prevents biases due to uncertainties in the travel time of air from the inlet to the buffer and a potential mixing of air in front of the valves. The travel time, however, becomes important at the start and end of sampling, where the rinse time determines the opening and closing of the magnet valves at the buffers (Sect. <xref ref-type="sec" rid="Ch1.S4.SS2"/>). Given the uncertainties in the pump speeds and the lengths of the tubing, the calculated rinse time (Eq. <xref ref-type="disp-formula" rid="Ch1.E10"/>) in the Zurich setup had an uncertainty of about 2 s. This can lead to the sampling of unwanted air and the loss of wanted air. The impact on the concentration difference between the updraft and downdraft flasks was estimated from MGA<sup>7</sup> data by discarding the first 2 s of measurements in sampling mode and adding another 2 s after the sampling end and vice versa (see Appendix <xref ref-type="sec" rid="App1.Ch1.S3.SS4"/>). There is no systematic bias, and the standard deviation in the change of <inline-formula><mml:math id="M337" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M338" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is 0.01 ppm.</p>
</sec>
<sec id="Ch1.S5.SS2.SSS3">
  <label>5.2.3</label><title><inline-formula><mml:math id="M339" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>CO<sub>2</sub> with variable sampling rate</title>
      <p id="d2e5615">Another source of uncertainty is the actual flow rate at which the air is sampled. This flow rate should be constant to ensure a homogeneous weighting of the collected air over time. For this purpose, mass flow controllers were placed right before the buffers. However, the MFCs are slightly affected by humidity and have a response time of 1 to 2 s. This means that, after a change in the pressure difference across the element, it will take up to 2 s for the flow to become constant again. In the REA system, the valves can switch with a frequency of up to 10 Hz, and, with each switching, the pressure behind the MFC changes between atmospheric pressure (standby mode) and the pressure in the buffer (sampling mode). Consequently, the deviation from the desired flow is especially large at the beginning and end of a sampling period, when the pressure in the buffer is 1 mbar or up to 1600 mbar, respectively. In addition, unsynchronized switching of the top valves (20 Hz scan rate) compared to the valves in the loop systems (10 Hz scan rate) can lead to underpressure in the intake line. The greater the underpressure, the higher the flow rate at the inlet when the top valve opens the next time. At the beginning of the Zurich campaign, there were additional biases due to a difference in flow rate during the rinse time compared to during the rest of the sampling period and due to a loss of sample when one of the two buffers reached the maximum pressure of 1.6 bar.</p>
      <p id="d2e5618">To estimate the effect on the concentration differences between updraft and downdraft flasks, <inline-formula><mml:math id="M341" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M342" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> was simulated 103 times for each REA run during the Zurich campaign, each time with a different weighting of the MGA<sup>7</sup> or IRGASON measurements. The weighting was thereby based on actual flow rate measurements of the MFCs (see Appendix <xref ref-type="sec" rid="App1.Ch1.S3.SS5"/>). While there is no systematic bias, the standard deviation of the <inline-formula><mml:math id="M344" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M345" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> difference between an inhomogeneous and a homogeneous weighting is, on average, 0.03 <inline-formula><mml:math id="M346" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.05 ppm. The deviations are largest during sampling periods with high <inline-formula><mml:math id="M347" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> variability, where the absolute <inline-formula><mml:math id="M348" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M349" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is also usually larger than average (see Fig. <xref ref-type="fig" rid="FC1"/>). Consequently, the relative uncertainties are less affected. To minimize this uncertainty, the flow rate during the rinse time was adjusted to the flow rate during the sampling period; the maximum buffer pressure, i.e., the pressure at which sampling is stopped, was reduced to 1.55 bar; and an additional pressure regulator was installed in each loop system.</p>
</sec>
</sec>
<sec id="Ch1.S5.SSx1" specific-use="unnumbered">
  <title>Mean <inline-formula><mml:math id="M350" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>CO<sub>2</sub> uncertainties</title>
      <p id="d2e5728">Table <xref ref-type="table" rid="T3"/> summarizes the estimated <inline-formula><mml:math id="M352" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M353" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> biases and uncertainties due to the different aspects mentioned above. It is important to note that the given means and standard deviations are solely based on data from the 103 REA runs during the Zurich campaign and a small number of quality control tests. The results may be different for other time periods and other sites. However, the estimates show that, except for a delayed collection of air, there is no bias in the concentration differences between updraft and downdraft samples. The standard deviations of the data set, on the other side, are of the order of the <inline-formula><mml:math id="M354" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M355" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> measurement uncertainty at the gas chromatograph (GC). This means that, for individual samples, e.g., those collected during periods of high variability in the <inline-formula><mml:math id="M356" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration of the ambient air, the flow variability and other non-idealities in the sampling process can be significant sources of <inline-formula><mml:math id="M357" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M358" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> uncertainty. Regular quality control tests and comparisons of flask samples with in situ measurement data are therefore important for independent validation of the performance of the system during a measurement campaign (see Sect. <xref ref-type="sec" rid="Ch1.S5.SS3"/>). Due to dependence on the ambient sampling conditions, the different <inline-formula><mml:math id="M359" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M360" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> uncertainty contributions should, in this case, be considered for each sampling period individually.</p>

<table-wrap id="T3" specific-use="star"><label>Table 3</label><caption><p id="d2e5818">Overview of the estimated biases and uncertainties in the <inline-formula><mml:math id="M361" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration differences between updraft and downdraft flasks (<inline-formula><mml:math id="M362" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M363" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>) due to non-idealities in the sampling procedure. Given are the means (bias) and standard deviations (uncertainty) of the measured or simulated changes in <inline-formula><mml:math id="M364" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M365" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> with respect to the expected values. For completeness, the measurement uncertainty of the gas chromatographic analysis of the flasks is also given. <inline-formula><mml:math id="M366" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> represents the number of measurements or sampling periods for the underlying data set.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="5">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="left"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Source of <inline-formula><mml:math id="M367" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M368" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Data sets</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M369" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M370" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M371" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M372" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M373" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">bias/uncertainty</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4">bias</oasis:entry>
         <oasis:entry colname="col5">uncertainty</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4">(ppm)</oasis:entry>
         <oasis:entry colname="col5">(ppm)</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Memory and surface effects</oasis:entry>
         <oasis:entry colname="col2">Lab measurements (flasks)</oasis:entry>
         <oasis:entry colname="col3">2</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">0.02</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">IRGASON-based <inline-formula><mml:math id="M374" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> estimates of subsequent REA samples</oasis:entry>
         <oasis:entry colname="col3">738</oasis:entry>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">500 ms delay in collection of air</oasis:entry>
         <oasis:entry colname="col2">20 Hz <inline-formula><mml:math id="M375" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> from MGA<sup>7</sup></oasis:entry>
         <oasis:entry colname="col3">74 periods</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M377" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.04</oasis:entry>
         <oasis:entry colname="col5">0.06</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">20 Hz REA flags from IRGASON</oasis:entry>
         <oasis:entry colname="col3">74 periods</oasis:entry>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">2 s uncertainty in rinse time</oasis:entry>
         <oasis:entry colname="col2">20 Hz <inline-formula><mml:math id="M378" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> from MGA<sup>7</sup></oasis:entry>
         <oasis:entry colname="col3">74 periods</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">0.01</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">20 Hz REA flags from IRGASON</oasis:entry>
         <oasis:entry colname="col3">74 periods</oasis:entry>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Variable flow rate</oasis:entry>
         <oasis:entry colname="col2">20 Hz <inline-formula><mml:math id="M380" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> from IRGASON/MGA<sup>7</sup></oasis:entry>
         <oasis:entry colname="col3">103 periods</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">0.03</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">20 Hz REA flags from IRGASON</oasis:entry>
         <oasis:entry colname="col3">103 periods</oasis:entry>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">0.2 Hz flow rate measurements</oasis:entry>
         <oasis:entry colname="col3">103 periods</oasis:entry>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">GC measurement uncertainty</oasis:entry>
         <oasis:entry colname="col2">Lab measurements (flasks)</oasis:entry>
         <oasis:entry colname="col3">103 flask pairs</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">0.04</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d2e6235">On the contrary, to estimate ff<inline-formula><mml:math id="M382" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> differences, the measurement uncertainty of <inline-formula><mml:math id="M383" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is by far the dominant source of uncertainty (see Appendix <xref ref-type="sec" rid="App1.Ch1.S4"/>). Moreover, when estimating ff<inline-formula><mml:math id="M384" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes, <inline-formula><mml:math id="M385" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula> calculated from <inline-formula><mml:math id="M386" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> for each REA run individually accounts for most of the above-mentioned effects <xref ref-type="bibr" rid="bib1.bibx43" id="paren.54"/>. In this case, the uncertainties due to the sampling process are considered to be negligible.</p>
</sec>
<sec id="Ch1.S5.SS3">
  <label>5.3</label><title>Quality control tests during the campaign</title>
      <p id="d2e6308">To ensure that the REA flask sampling system was working as intended, quality control tests were performed regularly throughout the Zurich campaign. In addition, the measured concentration differences of the REA flask pairs were compared with the in situ measurements of the IRGASON and the MGA<sup>7</sup>.</p>
<sec id="Ch1.S5.SS3.SSS1">
  <label>5.3.1</label><title>All-valves-open tests</title>
      <p id="d2e6327">To check for biases between updraft and downdraft sampling, as well as for leaks or other sources of contamination, “all-valves-open” tests were performed about once a month. This involved continuously filling two buffers with ambient air by turning on the pumps and opening both solenoid valves at the inlets, as well as the valves in the loop systems, until a buffer pressure of about 1.4 bar was reached and the samples could be transferred into the flask sampler. Biases between updraft and downdraft lines would result in concentration differences between the two corresponding flasks. To detect systematic errors that might affect both lines equally, a third flask was sampled simultaneously through a separate tube directly into the flask sampler, bypassing the REA loops and the buffers. In this case, the flow rate through the flask was reduced over sampling time <inline-formula><mml:math id="M388" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula> according to <inline-formula><mml:math id="M389" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:math></inline-formula> as flask concentrations then best reflect the real mean concentrations <xref ref-type="bibr" rid="bib1.bibx30" id="paren.55"/>. If the system is working as expected, the concentrations in the three flasks should agree within the WMO compatibility goal. Another quality control would be to compare the absolute concentrations of the flasks with the average concentration of in situ measurements over the sampling period. In Zurich, however, no accurate measurements of ambient air near the inlets were available (neither the IRGASON nor the MGA<sup>7</sup> were meant to be calibrated regularly according to WMO standards).</p>
      <p id="d2e6361">During the Zurich campaign, nine all-valves-open tests were performed. Figure <xref ref-type="fig" rid="F5"/> shows the <inline-formula><mml:math id="M391" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration of each flask compared to the respective mean of the “up” and “down” samples. In tests 2, 3, 7, 8, and 9, an additional flask was sampled directly into the flask sampler. However, it was later found that, at least at the beginning of the sampling periods, the flow rate was lower than intended. This means that the air in the direct flasks could not be exchanged sufficiently, such that the concentration does not represent the actual mean value but is also influenced by the purging period preceding the sampling. This particularly affects the flasks that were collected during a period with a large variability in concentration.</p>

      <fig id="F5"><label>Figure 5</label><caption><p id="d2e6379">Comparison of flask concentrations from all-valves-open tests. Shown are the differences in <inline-formula><mml:math id="M392" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> between flasks sampled through the updraft and downdraft intakes of the REA system and a flask sampled directly into the flask sampler compared to the mean of the two samples from the REA intake system. Large deviations in tests 5, 6, and 7 (beige-shaded parts with different scales on the <inline-formula><mml:math id="M393" display="inline"><mml:mi>y</mml:mi></mml:math></inline-formula> axis) were caused by two leakages in the loop systems. Outside this period, the results mostly agree within the WMO compatibility goals.</p></caption>
            <graphic xlink:href="https://amt.copernicus.org/articles/18/5349/2025/amt-18-5349-2025-f05.png"/>

          </fig>

      <p id="d2e6407">It can be seen that, for tests 1, 2, 3, 4, 8, and 9, up and down flasks agree within their measurement uncertainties, indicating that there is no significant bias between the two lines. The difference between the pairs of simultaneously collected flasks is, on average, <inline-formula><mml:math id="M394" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.01 <inline-formula><mml:math id="M395" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.03 ppm. The smaller <inline-formula><mml:math id="M396" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations of the direct flasks of tests 8 and 9 can be explained by a large <inline-formula><mml:math id="M397" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> variability with an overall increase over time. The fact that, in tests 2 and 3, up and down flasks also agree with the direct sample within the WMO compatibility goal indicates that there was no bias from the loop system or from the buffers that would have affected the up and down flasks in the same way.</p>
      <p id="d2e6446">In tests 5, 6, and 7, on the contrary, there are large concentration differences between up, down, and direct flasks (note the different scales on the <inline-formula><mml:math id="M398" display="inline"><mml:mi>y</mml:mi></mml:math></inline-formula> axis). This indicates a leak in the system, which also explains the large deviations of the measured <inline-formula><mml:math id="M399" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations from the expected <inline-formula><mml:math id="M400" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations based on in situ measurements observed at this time (compare with the next section). Unfortunately, due to the long time lag between sampling and the availability of concentration measurements, the leak could only be detected and fixed after several months.</p>
      <p id="d2e6478">In summary, the results show that, in general, there is no significant bias between updraft and downdraft sampling and that all-valves-open tests help detect leaks.</p>
</sec>
<sec id="Ch1.S5.SS3.SSS2">
  <label>5.3.2</label><title>Flask – in situ comparison</title>
      <p id="d2e6489">In addition to the all-valves-open tests, the measured concentration differences of the REA flask pairs were compared to in situ measurements from the IRGASON and the co-located MGA<sup>7</sup> by averaging the high-frequency data from the periods during which the respective valves were open and air was sampled, as denoted by the 20 Hz REA flags (see Appendix <xref ref-type="sec" rid="App1.Ch1.S3.SS2"/>). For the final <inline-formula><mml:math id="M402" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M403" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> estimates, uncertainties of <inline-formula><mml:math id="M404" display="inline"><mml:msqrt><mml:mn mathvariant="normal">2</mml:mn></mml:msqrt></mml:math></inline-formula> <inline-formula><mml:math id="M405" display="inline"><mml:mo>⋅</mml:mo></mml:math></inline-formula> 0.15 ppm for the IRGASON estimates and <inline-formula><mml:math id="M406" display="inline"><mml:msqrt><mml:mn mathvariant="normal">2</mml:mn></mml:msqrt></mml:math></inline-formula> <inline-formula><mml:math id="M407" display="inline"><mml:mo>⋅</mml:mo></mml:math></inline-formula> 0.1 ppm for the MGA<sup>7</sup> estimates were assumed based on the precision of the instruments as stated by the manufacturers. For the flask data uncertainty, the GC measurement uncertainties and the individually simulated sampling uncertainties from a memory effect, an uncertainty in the time lag between the vertical wind signal and the conditional collection of air, an uncertainty in the rinse time, and an inhomogeneous weighting of sample air due to variability in the sampling rate were taken into account (compare to Table <xref ref-type="table" rid="T3"/>).</p>
      <p id="d2e6562">The results of 102 REA runs during the Zurich campaign are shown in Fig. <xref ref-type="fig" rid="F6"/>, which plots the differences between <inline-formula><mml:math id="M409" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M410" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> from flask measurements and in situ estimates from the IRGASON and the MGA<sup>7</sup> over the sampling time (for 1 of the 103 REA selected runs, neither IRGASON nor MGA<sup>7</sup> data are available). The samples from November 2022 to February 2023, which were contaminated due to a leak (Sect. <xref ref-type="sec" rid="Ch1.S5.SS3"/>), were discarded.</p>

      <fig id="F6" specific-use="star"><label>Figure 6</label><caption><p id="d2e6606">Difference between <inline-formula><mml:math id="M413" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M414" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (up<inline-formula><mml:math id="M415" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>down) measured in the flasks and estimated from high-frequency measurements of the IRGASON and the MGA<sup>7</sup>. Error bars represent the flask measurement uncertainty (analysis plus estimated uncertainty due to the sampling process) and an estimated uncertainty of 0.15 ppm for the IRGASON and 0.1 ppm for the MGA<sup>7</sup>. MGA<sup>7</sup> data are only available from the middle of August. The leak period between the end of October and the beginning of February and the measurements by the IRGASON of <inline-formula><mml:math id="M419" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> signal strength <inline-formula><mml:math id="M420" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 90 % and the correlation with the MGA<sup>7</sup> <inline-formula><mml:math id="M422" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 0.5 were excluded. The boxplot on the right shows the mean, median, and interquartile range of all summer and winter samples.</p></caption>
            <graphic xlink:href="https://amt.copernicus.org/articles/18/5349/2025/amt-18-5349-2025-f06.png"/>

          </fig>

      <p id="d2e6702">The fact that the MGA<sup>7</sup> estimates agree very well with the flask measurements (mean difference in <inline-formula><mml:math id="M424" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M425" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M426" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 0.01 ppm, with a standard deviation of 0.23 ppm) provides evidence that there were no major leaks or significant biases due to the sampling process. A potential bias due to a delayed collection of air (Sect. <xref ref-type="sec" rid="Ch1.S5.SS2.SSS1"/>) is therefore considered to be negligible. Four <inline-formula><mml:math id="M427" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M428" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> measurements deviated from the expected value by more than 0.5 ppm. The exact reasons are not known, but, for example, during the REA run on 21 February 2023 (07:00–08:00 LT), the <inline-formula><mml:math id="M429" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration increased by more than 100 ppm, and the <inline-formula><mml:math id="M430" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> difference between the updraft and downdraft samples was the highest observed. During the REA run on 11 March 2023 (13:30–14:30 LT), the wind measurements were very spiky, likely due to a rain event earlier in the day, and, according to the REA flags, the valves did not switch as one would expect from the wind data. These sampling periods must therefore be examined more closely before further analysis.</p>
      <p id="d2e6780">The IRGASON-based <inline-formula><mml:math id="M431" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M432" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> estimates deviate significantly more from the flask measurements, with an average of 0.20 <inline-formula><mml:math id="M433" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.33 ppm. This, however, could be linked to the fact that the IRGASON <inline-formula><mml:math id="M434" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> dry molar fractions were derived from a <inline-formula><mml:math id="M435" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> density output that does not properly account for high-frequency fluctuations in air temperature in the sensing path because the ambient temperature measured by the EC100 slow-response temperature probe is used in the conversion of absorption measurements into <inline-formula><mml:math id="M436" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> density (see Appendix <xref ref-type="sec" rid="App1.Ch1.S3.SS1"/>). As described by <xref ref-type="bibr" rid="bib1.bibx22" id="text.56"/>, this causes a systematic bias compared to closed-path gas analyzers due to the high-frequency temperature  attenuation. Indeed, the difference between <inline-formula><mml:math id="M437" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>CO<sub>2, flasks</sub> and <inline-formula><mml:math id="M439" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>CO<sub>2, IRGA</sub> correlates with the difference between ultrasonic temperature during updraft and downdraft conditions. <xref ref-type="bibr" rid="bib1.bibx22" id="text.57"/> showed that this bias could be reduced significantly by using the ultrasonic anemometer's fast-response temperature. Due to a lack of knowledge, this additional <inline-formula><mml:math id="M441" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> density output, where the high-frequency temperature is used in the absorption-to-density conversion, was not recorded during the Zurich campaign. Since the differences between IRGASON and flask measurements could be explained by the insufficient correction of spectroscopic effects during high sensible heat fluxes, the good agreement between flask data and MGA<sup>7</sup> measurements indicates an overall successful implementation of the REA method.</p>
</sec>
</sec>
</sec>
<sec id="Ch1.S6">
  <label>6</label><title><inline-formula><mml:math id="M443" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>CO<sub>2</sub> partitioning</title>
      <p id="d2e6940">Figure <xref ref-type="fig" rid="F7"/> shows the differences in <inline-formula><mml:math id="M445" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and ff<inline-formula><mml:math id="M446" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> between the updraft and downdraft flasks, measured with the gas chromatograph at the ICOS FCL in Jena and derived from the <inline-formula><mml:math id="M447" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> analyses at the ICOS CRL in Heidelberg (Eq. <xref ref-type="disp-formula" rid="Ch1.E9"/>). Of the 103 REA flask pairs selected for laboratory analysis and analyzed for <inline-formula><mml:math id="M448" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> at the FCL (Sect. <xref ref-type="sec" rid="Ch1.S4.SS5"/>), 3 samples were lost during graphitization at the CRL. Eight sample pairs from the end of the campaign were not analyzed for <inline-formula><mml:math id="M449" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> because their total <inline-formula><mml:math id="M450" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> difference was small, and the expected significance of the <inline-formula><mml:math id="M451" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> analysis was low compared to the associated costs. This leaves a total of 92 <inline-formula><mml:math id="M452" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M453" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> estimates. The error bars represent the measurement uncertainties (<inline-formula><mml:math id="M454" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M455" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> uncertainties of about 0.05 ppm in <inline-formula><mml:math id="M456" display="inline"><mml:mi>x</mml:mi></mml:math></inline-formula> direction are omitted for clarity). In the analysis of ff<inline-formula><mml:math id="M457" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, uncertainties due to the sampling process were considered to be negligible (Sect. <xref ref-type="sec" rid="Ch1.S5"/>). The colors indicate the month in which the sample was collected.</p>

      <fig id="F7"><label>Figure 7</label><caption><p id="d2e7097"><inline-formula><mml:math id="M458" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M459" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M460" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M461" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> of the 92 selected REA flask pairs from Zurich.</p></caption>
        <graphic xlink:href="https://amt.copernicus.org/articles/18/5349/2025/amt-18-5349-2025-f07.png"/>

      </fig>

      <p id="d2e7140">It can be seen that the largest concentration differences between updraft and downdraft flasks with <inline-formula><mml:math id="M462" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M463" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> of up to 13.6 ppm were collected in February and March, when anthropogenic emissions are usually higher than average due to residential heating. Most of these samples are close to the <inline-formula><mml:math id="M464" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> line, which represents the case where the net non-fossil <inline-formula><mml:math id="M465" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> flux is zero and the measured <inline-formula><mml:math id="M466" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes are completely due to fossil fuel emissions. Accordingly, the observed deviations from this line to the right or the left indicate dominant respiratory and other non-fossil sources or photosynthetic signals, respectively. For samples along the <inline-formula><mml:math id="M467" display="inline"><mml:mi>x</mml:mi></mml:math></inline-formula> axis, the ff<inline-formula><mml:math id="M468" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> contribution is approximately zero. In agreement with other studies <xref ref-type="bibr" rid="bib1.bibx59 bib1.bibx38 bib1.bibx9 bib1.bibx53" id="paren.58"><named-content content-type="pre">e.g.,</named-content></xref>, this shows that there are significant non-fossil <inline-formula><mml:math id="M469" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> signals even in winter.</p>
      <p id="d2e7230">It should be noted that the applied sample selection criteria do not necessarily exclude sampling periods in which a change in the storage below the sampling height contributes to the measured fluxes. This is the case, for example, when the depth of the atmospheric boundary layer increases rapidly due to convective, turbulent vertical motions generated by radiative heating of the surface in the morning <xref ref-type="bibr" rid="bib1.bibx50" id="paren.59"/>. Based on an observed drop in <inline-formula><mml:math id="M470" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration in the morning and a preliminary investigation of the turbulence structure of the atmosphere, some of the Zurich REA flasks with large <inline-formula><mml:math id="M471" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration differences between updraft and downdraft samples were probably collected during this time. In this case, the composition of the samples does not necessarily represent the actual surface fluxes during the REA sampling periods but rather represents the integrated nocturnal fluxes. Further interpretation of the results and a subsequent investigation of the corresponding <inline-formula><mml:math id="M472" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes therefore require a thorough analysis of the sampling periods.</p>
      <p id="d2e7269">What also becomes clear in Fig. <xref ref-type="fig" rid="F7"/> is that most signals are of the order of 1 ppm or less, which is small compared to the <inline-formula><mml:math id="M473" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M474" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> uncertainty. The latter was, on average, 1.2 ppm and was primarily due to the mean <inline-formula><mml:math id="M475" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> measurement precision of 1.8 ‰ (Appendix <xref ref-type="sec" rid="App1.Ch1.S4"/>). Consequently, ff<inline-formula><mml:math id="M476" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> flux estimates derived from samples with <inline-formula><mml:math id="M477" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M478" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M479" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 1.2 ppm will mostly have uncertainties of more than 100 % (compare to Eq. <xref ref-type="disp-formula" rid="Ch1.E2"/>). This highlights the importance of further quality control of the existing data set for subsequent calculations and quantitative analyses of ff<inline-formula><mml:math id="M480" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes.</p>
</sec>
<sec id="Ch1.S7" sec-type="conclusions">
  <label>7</label><title>Conclusions</title>
      <p id="d2e7367">A relaxed eddy accumulation (REA) flask sampling system for <inline-formula><mml:math id="M481" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula>-based estimation of ff<inline-formula><mml:math id="M482" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes for urban eddy covariance (EC) flux measurements was developed and tested in the ICOS Flask and Calibration Laboratory in Jena, Germany, and on a tall tower near the city center of Zurich, Switzerland.</p>
      <p id="d2e7393">Two fast-response valves are activated by the vertical wind signal from an ultrasonic anemometer of a co-located IRGASON. The conditionally collected air accumulates in two separate cylinders (one for the updraft sample and one for the downdraft sample) and is transferred into 3 L glass flasks after the sampling period using an automated 24-port flask sampler. The samples can thus be analyzed in the laboratory for a variety of gases, including <inline-formula><mml:math id="M483" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. Laboratory tests and quality control tests during the first measurement campaign in Zurich showed that the sampling procedure does not cause a significant bias in the <inline-formula><mml:math id="M484" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> differences between updraft and downdraft samples. Uncertainties due to the sampling process are negligible when estimating fossil fuel <inline-formula><mml:math id="M485" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> differences between the updraft and downdraft flasks and, consequently, ff<inline-formula><mml:math id="M486" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes as these are dominated by the <inline-formula><mml:math id="M487" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> measurement precision. The novel REA flask sampling system itself fulfills the high technical requirements of relaxed eddy accumulation, providing high-quality data for scientific studies of multiple non-reactive species.</p>
      <p id="d2e7459">Due to the prerequisites of the EC and REA method, e.g., stationarity and well-developed turbulence, and the costs and efforts associated with the flask analysis, only a limited number of individual sampling periods can be analyzed. In general, operating the system, i.e., scheduling sampling events, analyzing and selecting suitable sampling periods, sending the flasks to the laboratory, etc., requires frequent remote and on-site work.</p>
      <p id="d2e7462">Given the good agreement between the total <inline-formula><mml:math id="M488" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration differences measured in the REA flask sample pairs and observed from in situ measurements of an MGA<sup>7</sup>, the results of the first measurement campaign in Zurich serve as a proof of concept for a <inline-formula><mml:math id="M490" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula>-based separation of fossil and non-fossil <inline-formula><mml:math id="M491" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> signals. As expected, the <inline-formula><mml:math id="M492" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> differences between updraft and downdraft samples were largest during the heating season in February and March. In this case, fossil fuel emissions were the major contributor. However, even in winter, small photosynthetic and significant non-fossil (respiration and biofuels) signals were observed, highlighting the role of the biosphere in an urban environment.</p>
      <p id="d2e7520">The main challenge so far was a generally small signal-to-noise ratio of measured <inline-formula><mml:math id="M493" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> differences. Resulting <inline-formula><mml:math id="M494" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M495" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> uncertainties on the order of 100 % limit the interpretation of individual results. However, a new accelerator mass spectrometer has reduced the <inline-formula><mml:math id="M496" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M497" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> measurement uncertainty and, thus, the <inline-formula><mml:math id="M498" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M499" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> uncertainty by about 23 %, which will increase the fraction of usable samples in future applications.</p>
      <p id="d2e7591">Two improvements are proposed to further increase the concentration differences in future campaigns: first, the two pumps in the loop systems are recommended to be replaced by larger pumps with a higher pump speed, allowing a reduction in the proportion of time that air is collected and, thus, a larger deadband width <inline-formula><mml:math id="M500" display="inline"><mml:mi mathvariant="italic">δ</mml:mi></mml:math></inline-formula>. Second, the so-called hyperbolic relaxed eddy accumulation could be added into the logger program. With this setting, as proposed by <xref ref-type="bibr" rid="bib1.bibx3" id="text.60"/>, air would only be collected if the fluctuations in vertical wind speed <inline-formula><mml:math id="M501" display="inline"><mml:mrow><mml:msup><mml:mi>w</mml:mi><mml:mo>′</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> and concentration <inline-formula><mml:math id="M502" display="inline"><mml:mrow><mml:msup><mml:mi>c</mml:mi><mml:mo>′</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> are above a certain threshold. For the latter, the 20 Hz <inline-formula><mml:math id="M503" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> measurements of the IRGASON could be used. Excluding eddies with little flux contribution increases the concentration differences more effectively than a linear deadband with larger deadband width and is recommended for scalars where the detection limit is of concern <xref ref-type="bibr" rid="bib1.bibx55" id="paren.61"/>. However, the hyperbolic deadband comes with additional challenges as the threshold for not only vertical wind velocity fluctuations but also <inline-formula><mml:math id="M504" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> mixing ratio fluctuations would need to be dynamically adjusted. The signal-to-noise ratio could also be increased if multiple graphite targets were to be analyzed or if measurements were to be taken closer to a particular source. However, obtaining and analyzing multiple flask samples would require major changes in the setup of the flask sampler and would multiply the cost and instrument time accordingly. In addition, analyzing turbulent fluxes on a neighborhood scale requires tall-tower measurements within the inertial sublayer. Besides limitations in the availability of the corresponding infrastructure, reducing the measurement height was therefore not an option for our study.</p>
      <p id="d2e7652">The next step in the process will be to derive the actual ff<inline-formula><mml:math id="M505" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes using EC-based total <inline-formula><mml:math id="M506" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes and assuming scalar similarity to estimate the <inline-formula><mml:math id="M507" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula> coefficient for each sampling period individually (Eq. <xref ref-type="disp-formula" rid="Ch1.E2"/>). This will allow for a fully independent time-resolved evaluation of the Zurich emission inventories, taking into account the changing turbulent flux footprints during each of the sampling intervals. Furthermore, the analysis of <inline-formula><mml:math id="M508" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> and other species in the updraft and downdraft samples along with <inline-formula><mml:math id="M509" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> will provide guidance regarding the use of co-emitted species for partitioning total <inline-formula><mml:math id="M510" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes into fossil and non-fossil components.</p>
</sec>

      
      </body>
    <back><app-group>

<app id="App1.Ch1.S1">
  <label>Appendix A</label><title>Setup of the REA flask sampling system</title>

      <fig id="FA1"><label>Figure A1</label><caption><p id="d2e7734">Photo of the REA flask sampling system as installed in the control room below the tower at Zurich–Hardau. (1) Screen with flask sampler software. (2) Connection to the CR6 data logger. (3) Intake lines. (4) Loop system. (5) Buffers. (6) Air dryer. (7) Flasks.</p></caption>
        <graphic xlink:href="https://amt.copernicus.org/articles/18/5349/2025/amt-18-5349-2025-f08.jpg"/>

      </fig>

<table-wrap id="TA1" specific-use="star"><label>Table A1</label><caption><p id="d2e7746">Components of the REA flask sampling system (compare Figs. <xref ref-type="fig" rid="F1"/> and <xref ref-type="fig" rid="F2"/>).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Abbreviation</oasis:entry>
         <oasis:entry colname="col2">Instrument</oasis:entry>
         <oasis:entry colname="col3">Company</oasis:entry>
         <oasis:entry colname="col4">Model (version)</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">IRGASON</oasis:entry>
         <oasis:entry colname="col2">Infrared gas analyzer and 3D ultrasonic anemometer</oasis:entry>
         <oasis:entry colname="col3">Campbell Sci.<sup>a</sup></oasis:entry>
         <oasis:entry colname="col4">IRGASON (SS2-BB-IC)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">DC controller</oasis:entry>
         <oasis:entry colname="col2">Eight-channel solid-state DC controller</oasis:entry>
         <oasis:entry colname="col3">Campbell Sci.<sup>a</sup></oasis:entry>
         <oasis:entry colname="col4">SDM-CD8S</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">IRGASON electronics</oasis:entry>
         <oasis:entry colname="col2">Gas analyzer electronics with enclosure</oasis:entry>
         <oasis:entry colname="col3">Campbell Sci.<sup>a</sup></oasis:entry>
         <oasis:entry colname="col4">EC100</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Data logger</oasis:entry>
         <oasis:entry colname="col2">Measurement and control data logger</oasis:entry>
         <oasis:entry colname="col3">Campbell Sci.<sup>a</sup></oasis:entry>
         <oasis:entry colname="col4">CR6</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Pump P<sub>a</sub></oasis:entry>
         <oasis:entry colname="col2">Pump to transfer air into buffers</oasis:entry>
         <oasis:entry colname="col3">KNF<sup>b</sup></oasis:entry>
         <oasis:entry colname="col4">N816AV.12DCB</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Pump P<sub>b</sub></oasis:entry>
         <oasis:entry colname="col2">Pump to transfer samples to flasks</oasis:entry>
         <oasis:entry colname="col3">KNF<sup>b</sup></oasis:entry>
         <oasis:entry colname="col4">N816AV.12DCB</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Pump P<sub>c</sub></oasis:entry>
         <oasis:entry colname="col2">Pump to evacuate buffers</oasis:entry>
         <oasis:entry colname="col3">Edwards<sup>c</sup></oasis:entry>
         <oasis:entry colname="col4">nXDS6i/Edwards nXDS15i</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">MFC</oasis:entry>
         <oasis:entry colname="col2">Mass flow controller 0.2–10 L<sub><italic>n</italic></sub> min<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col3">Bronkhorst<sup>d</sup></oasis:entry>
         <oasis:entry colname="col4">F-201CV-10K-AAD-22-V</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Pressure control valve</oasis:entry>
         <oasis:entry colname="col2">Pressure control valve</oasis:entry>
         <oasis:entry colname="col3">SMC<sup>d</sup></oasis:entry>
         <oasis:entry colname="col4">AP100-N02B-X201</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Valve in the loop system</oasis:entry>
         <oasis:entry colname="col2">Three port magnet valve</oasis:entry>
         <oasis:entry colname="col3">SMC<sup>d</sup></oasis:entry>
         <oasis:entry colname="col4">VX3244HZ-02N-5DS1-B</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Valve at the buffer</oasis:entry>
         <oasis:entry colname="col2">Vacuum magnet valve</oasis:entry>
         <oasis:entry colname="col3">SMC<sup>d</sup></oasis:entry>
         <oasis:entry colname="col4">XSA3-32S-5D2</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Solenoid valve at the inlet</oasis:entry>
         <oasis:entry colname="col2">Solenoid valve</oasis:entry>
         <oasis:entry colname="col3">SMC<sup>d</sup></oasis:entry>
         <oasis:entry colname="col4">VX214NFBXB</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">p<sub>1</sub>–p<sub>4</sub></oasis:entry>
         <oasis:entry colname="col2">Pressure sensors</oasis:entry>
         <oasis:entry colname="col3">SMC<sup>d</sup></oasis:entry>
         <oasis:entry colname="col4">PSE543A-N01</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Buffer 1–4</oasis:entry>
         <oasis:entry colname="col2">Cylinders</oasis:entry>
         <oasis:entry colname="col3">Matar<sup>e</sup></oasis:entry>
         <oasis:entry colname="col4">50 L aluminum cylinder</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d2e7753"><sup>a</sup> Campbell Scientific Inc., Logan, UT, USA. <sup>b</sup> KNF Neuberger GmbH, Freiburg, Germany. <sup>c</sup> Edwards Vacuum, Burgess Hill, UK. <sup>d</sup> SMC Corporation, Tokyo, Japan. <sup>e</sup> Matar, Mazzano, Italy.</p></table-wrap-foot></table-wrap>


</app>

<app id="App1.Ch1.S2">
  <label>Appendix B</label><title>Laboratory tests</title>
<sec id="App1.Ch1.S2.SS1">
  <label>B1</label><title>Contamination test 1</title>
      <p id="d2e8237">To test for a potential contamination of the samples during the sampling process, e.g., due to a leak in the line or at the valves or due to surface effects with the surfaces of tubes and buffers, the REA system was set up in  the laboratory of the ICOS FCL in Jena. For practical reasons, the IRGASON and the fast-response valves were placed in the same room as the buffers and the flask sampler but were connected through two <inline-formula><mml:math id="M537" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 50 m long Synflex tubes. A reference gas cylinder with 407.71 <inline-formula><mml:math id="M538" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.01 ppm <inline-formula><mml:math id="M539" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> was connected to a custom dew point generator. In this way, the humidity of the gas was comparable to that of typical ambient air (dew point of approximately 12 °C), thus avoiding increased or reduced surface effects along the tube and in the buffers, which could result from a change in water availability <xref ref-type="bibr" rid="bib1.bibx61" id="paren.62"/>. The humidified gas was then directed through a three-way valve to the solenoid valves and sampled into the respective buffers according to a wind signal from the IRGASON, artificially generated through a fan. From there, the gas was transferred into the flask sampler as during a regular REA run. The test was repeated five times, with slightly different setups as listed in Table <xref ref-type="table" rid="TB1"/>. The results are given in Fig. <xref ref-type="fig" rid="F4"/>.</p>
</sec>
<sec id="App1.Ch1.S2.SS2">
  <label>B2</label><title>Contamination test 2: memory effect test</title>
      <p id="d2e8281">Although the first set of contamination tests (Sect. <xref ref-type="sec" rid="App1.Ch1.S2.SS1"/>) had already shown that the concentration of the sample is not significantly changed by the sampling process, a second experiment was performed to  quantify the influence of the previous sampling on the flask concentration. For this purpose, a cylinder with a known gas concentration and pure nitrogen were alternately connected to the loop systems via an approximately 80 m long Synflex tube with an 8 mm outer diameter. As in first contamination tests (Sect. <xref ref-type="sec" rid="App1.Ch1.S2.SS1"/>), the dry gas from the tanks was humidified through a custom dew point generator to a dew point of approximately 12 °C, comparable to normal sampling conditions of ambient (humid) air. All valves were opened, and one buffer (always buffer 4) was filled six times to approximately 1.2 bar. The cylinder gas was then transferred into the flask sampler, and the buffer was evacuated again (residual buffer pressure of about 0.6 mbar). The <inline-formula><mml:math id="M540" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations measured in the respective flasks are given in Table <xref ref-type="table" rid="TB2"/>.</p>

<table-wrap id="TB1"><label>Table B1</label><caption><p id="d2e8305">List of differences between the six setups for contamination tests in the laboratory.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="2">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Test no.</oasis:entry>
         <oasis:entry colname="col2">Setup</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">1</oasis:entry>
         <oasis:entry colname="col2">Open split between humidifier and three-way valve</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Previous sample: cylinder air</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">2</oasis:entry>
         <oasis:entry colname="col2">Open split between humidifier and three-way valve</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Previous sample: cylinder air</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">3</oasis:entry>
         <oasis:entry colname="col2">Humidifier directly connected to three-way valve</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Previous sample: cylinder air</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">4</oasis:entry>
         <oasis:entry colname="col2">Humidifier directly connected to three-way valve</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Previous sample: ambient (room) air</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">5</oasis:entry>
         <oasis:entry colname="col2">Humidifier directly connected to the solenoid valve on the updraft side, while ambient (room) air was sampled on the downdraft side</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Previous sample: cylinder air</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">6</oasis:entry>
         <oasis:entry colname="col2">Humidifier directly connected to the solenoid valve on the downdraft side, while ambient (room) air was sampled on the updraft side</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Previous sample: cylinder air</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<table-wrap id="TB2"><label>Table B2</label><caption><p id="d2e8440"><inline-formula><mml:math id="M541" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations of the flasks compared to the reference gas cylinder that was connected to the inlets before and after sampling pure nitrogen. The results are given in chronological order of the fillings.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Filling</oasis:entry>
         <oasis:entry colname="col2">CO<sub>2, cyl</sub></oasis:entry>
         <oasis:entry colname="col3">CO<sub>2, flask</sub></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M544" display="inline"><mml:mo>|</mml:mo></mml:math></inline-formula>CO<sub>2, flask</sub> <inline-formula><mml:math id="M546" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> CO<sub>2, cyl</sub> <inline-formula><mml:math id="M548" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula> 1<inline-formula><mml:math id="M549" display="inline"><mml:mo>|</mml:mo></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">(ppm)</oasis:entry>
         <oasis:entry colname="col3">(ppm)</oasis:entry>
         <oasis:entry colname="col4">(%)</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">1. Cylinder</oasis:entry>
         <oasis:entry colname="col2">405.75 <inline-formula><mml:math id="M550" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.05</oasis:entry>
         <oasis:entry colname="col3">405.83 <inline-formula><mml:math id="M551" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.06</oasis:entry>
         <oasis:entry colname="col4">0.020 <inline-formula><mml:math id="M552" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.018</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">2. Nitrogen</oasis:entry>
         <oasis:entry colname="col2">0</oasis:entry>
         <oasis:entry colname="col3">–</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">3. Cylinder</oasis:entry>
         <oasis:entry colname="col2">405.75 <inline-formula><mml:math id="M553" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.05</oasis:entry>
         <oasis:entry colname="col3">404.41 <inline-formula><mml:math id="M554" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.05</oasis:entry>
         <oasis:entry colname="col4"><bold>0.330</bold> <inline-formula><mml:math id="M555" display="inline"><mml:mo mathvariant="bold">±</mml:mo></mml:math></inline-formula> <bold>0.017</bold></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">4. Cylinder</oasis:entry>
         <oasis:entry colname="col2">405.75 <inline-formula><mml:math id="M556" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.05</oasis:entry>
         <oasis:entry colname="col3">405.67 <inline-formula><mml:math id="M557" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.08</oasis:entry>
         <oasis:entry colname="col4">0.020 <inline-formula><mml:math id="M558" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.023</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">5. Nitrogen</oasis:entry>
         <oasis:entry colname="col2">0</oasis:entry>
         <oasis:entry colname="col3">–</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">6. Cylinder</oasis:entry>
         <oasis:entry colname="col2">405.75 <inline-formula><mml:math id="M559" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.05</oasis:entry>
         <oasis:entry colname="col3">404.78 <inline-formula><mml:math id="M560" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.05</oasis:entry>
         <oasis:entry colname="col4"><bold>0.239</bold> <inline-formula><mml:math id="M561" display="inline"><mml:mo mathvariant="bold">±</mml:mo></mml:math></inline-formula> <bold>0.017</bold></oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d2e8770">While the <inline-formula><mml:math id="M562" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations of flasks 1 and 4 agreed with the cylinder gas within 1.5<inline-formula><mml:math id="M563" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>, flasks 3 and 6, collected after flushing the system with nitrogen, i.e., after an intentionally chosen large <inline-formula><mml:math id="M564" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> change of 405.7 ppm, deviated by more than 1 ppm. Assuming that the bias in the flask concentration <inline-formula><mml:math id="M565" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">meas</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M566" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M567" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">ref</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (measured minus reference concentration) depends linearly on the concentration difference between the current and the previous sample <inline-formula><mml:math id="M568" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">ref</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M569" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M570" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mrow><mml:mi mathvariant="normal">ref</mml:mi><mml:mo>,</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>, it can therefore be expected that CO<sub>2<sub>meas</sub></sub> <inline-formula><mml:math id="M572" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula> CO<sub>2<sub>ref</sub></sub> <inline-formula><mml:math id="M574" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M575" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mn mathvariant="normal">0.0028</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mo>±</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mn mathvariant="normal">0.0005</mml:mn><mml:mo>)</mml:mo><mml:mo>⋅</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mi mathvariant="normal">ref</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mrow><mml:mi mathvariant="normal">ref</mml:mi><mml:mo>,</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. As an uncertainty, half of the difference between the two measurements was taken. Based on the IRGASON-derived <inline-formula><mml:math id="M576" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> estimates of the updraft and downdraft samples of all REA sampling periods during the Zurich campaign (702 in total), the mean concentration difference between subsequent buffer fillings was estimated to be 0 <inline-formula><mml:math id="M577" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 52 ppm (assuming that buffer sets 1 and 2 are always used alternately). Consequently, there is no systematic bias in absolute flask concentrations, while the estimated uncertainty is 0.17 ppm.</p>
      <p id="d2e8979">Since the updraft and downdraft samples are usually affected in a similar way, the effect on concentration differences between them is expected to be even smaller. Multiplying the mean difference between subsequent concentration differences between updraft and downdraft sampling (estimated again from the IRGASON data) of 0 <inline-formula><mml:math id="M578" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 7 ppm with the 0.28 <inline-formula><mml:math id="M579" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.05 % derived from the laboratory experiments (Table <xref ref-type="table" rid="TB2"/>) results in an estimated uncertainty of about 0.02 ppm. Again, there is no systematic bias.</p>
</sec>
<sec id="App1.Ch1.S2.SS3">
  <label>B3</label><title>Rinse time measurements</title>
      <p id="d2e9008">In the field, the rinse time, i.e., the time between the start (end) of the sampling period and the opening (closing) of the valves at the buffers, is calculated from the estimated pump speed and the dimensions of the intake lines according to Eq. (<xref ref-type="disp-formula" rid="Ch1.E10"/>). To test the validity of this approach and to quantify the associated uncertainty, a cylinder with pure <inline-formula><mml:math id="M580" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> was connected at the normally closed position of a three-way valve installed in front of the fast-response valves. The loop system was in sampling mode (pump on, three-way valves in the loop systems connecting the pump with the outflow). Then, the three-way valve was opened to the <inline-formula><mml:math id="M581" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> cylinder for 200 ms, injecting a short <inline-formula><mml:math id="M582" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> pulse into the line. This pulse was detected at the outflow of the REA sampler by a <inline-formula><mml:math id="M583" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> sensor (SprintIR-WF-20, Gas Sensing Solutions Ltd, Cumbernauld, UK). The travel time of the <inline-formula><mml:math id="M584" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> pulse was thus estimated as the time between the opening of the three-way valve and the start of the detected spike. The experiment was repeated several times and for different tubes (see Table <xref ref-type="table" rid="TB3"/>). The measurements <inline-formula><mml:math id="M585" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mrow><mml:mi mathvariant="normal">r</mml:mi><mml:mo>,</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">meas</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> were then compared to the values <inline-formula><mml:math id="M586" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mrow><mml:mi mathvariant="normal">r</mml:mi><mml:mo>,</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">est</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> estimated from the length and inner radius of the tube and the flow rate measured at the outflow of the REA sampler. As shown in Table <xref ref-type="table" rid="TB3"/>, both values agreed within less than 1<inline-formula><mml:math id="M587" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>.</p>

<table-wrap id="TB3"><label>Table B3</label><caption><p id="d2e9122">Length <inline-formula><mml:math id="M588" display="inline"><mml:mrow><mml:msub><mml:mi>l</mml:mi><mml:mi mathvariant="normal">t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and inner diameter <inline-formula><mml:math id="M589" display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mi mathvariant="normal">t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> of the tubes connecting the REA inlets with the loop systems. Together with the pump flow velocity <inline-formula><mml:math id="M590" display="inline"><mml:mrow><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">pump</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (flow rate measured at the outflow), the travel time from the inlet to the outflow <inline-formula><mml:math id="M591" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mrow><mml:mi mathvariant="normal">r</mml:mi><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">est</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> was estimated according to Eq. (<xref ref-type="disp-formula" rid="Ch1.E10"/>) and compared with <inline-formula><mml:math id="M592" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mrow><mml:mi mathvariant="normal">r</mml:mi><mml:mo>,</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">meas</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>, which was measured with a <inline-formula><mml:math id="M593" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> pulse.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="6">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="center"/>
     <oasis:colspec colnum="3" colname="col3" align="center"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="center"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M594" display="inline"><mml:mrow><mml:msub><mml:mi>l</mml:mi><mml:mi mathvariant="normal">t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M595" display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mi mathvariant="normal">t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M596" display="inline"><mml:mrow><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">pump</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M597" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mrow><mml:mi mathvariant="normal">r</mml:mi><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">est</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M598" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mrow><mml:mi mathvariant="normal">r</mml:mi><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">meas</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">Deviation <inline-formula><mml:math id="M599" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mrow><mml:mi mathvariant="normal">r</mml:mi><mml:mo>,</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">est</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"><inline-formula><mml:math id="M600" display="inline"><mml:mo>(</mml:mo></mml:math></inline-formula>m<inline-formula><mml:math id="M601" display="inline"><mml:mo>)</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M602" display="inline"><mml:mo>(</mml:mo></mml:math></inline-formula>mm<inline-formula><mml:math id="M603" display="inline"><mml:mo>)</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M604" display="inline"><mml:mo>(</mml:mo></mml:math></inline-formula>L min<inline-formula><mml:math id="M605" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M606" display="inline"><mml:mo>(</mml:mo></mml:math></inline-formula>s<inline-formula><mml:math id="M607" display="inline"><mml:mo>)</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M608" display="inline"><mml:mo>(</mml:mo></mml:math></inline-formula>s<inline-formula><mml:math id="M609" display="inline"><mml:mo>)</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">and <inline-formula><mml:math id="M610" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mrow><mml:mi mathvariant="normal">r</mml:mi><mml:mo>,</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">meas</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">10.45 <inline-formula><mml:math id="M611" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.10</oasis:entry>
         <oasis:entry colname="col2">2.2 <inline-formula><mml:math id="M612" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.1</oasis:entry>
         <oasis:entry colname="col3">5.9 <inline-formula><mml:math id="M613" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.5</oasis:entry>
         <oasis:entry colname="col4">1.73 <inline-formula><mml:math id="M614" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.21</oasis:entry>
         <oasis:entry colname="col5">1.9 <inline-formula><mml:math id="M615" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.2</oasis:entry>
         <oasis:entry colname="col6">0.6<inline-formula><mml:math id="M616" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">58.0 <inline-formula><mml:math id="M617" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.1</oasis:entry>
         <oasis:entry colname="col2">2.2 <inline-formula><mml:math id="M618" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.1</oasis:entry>
         <oasis:entry colname="col3">4.0 <inline-formula><mml:math id="M619" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.5</oasis:entry>
         <oasis:entry colname="col4">13.0 <inline-formula><mml:math id="M620" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 2.0</oasis:entry>
         <oasis:entry colname="col5">11.5 <inline-formula><mml:math id="M621" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.2</oasis:entry>
         <oasis:entry colname="col6">0.7<inline-formula><mml:math id="M622" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d2e9569">The experiment was also done when the REA valves opened or closed once per second and were therefore only open half the time. As expected, the time until the signal was detected was approximately twice as long as when the valves were permanently open. This suggests that the concept of the rinse time also works well at the start of an REA run when the valves are already switching according to the wind signal.</p>
</sec>
</app>

<app id="App1.Ch1.S3">
  <label>Appendix C</label><title><inline-formula><mml:math id="M623" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>CO<sub>2</sub> simulations</title>
      <p id="d2e9597">For uncertainty estimation and quality control, the expected <inline-formula><mml:math id="M625" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> differences between the updraft and downdraft samples collected in Zurich were calculated from the high-frequency in situ measurements of the IRGASON and the MGA<sup>7</sup>. This required the synchronization between IRGASON and MGA<sup>7</sup> data and the start and end times of the REA runs, despiking of the 20 Hz time series according to <xref ref-type="bibr" rid="bib1.bibx35" id="text.63"/>, and conversion of measured gas densities into dry molar fractions. The high-frequency measurements were then averaged over the time periods when the updraft and/or downdraft valve was open and air was collected using the 20 Hz REA flags (Sect. <xref ref-type="sec" rid="Ch1.S4.SS1"/>).</p>
<sec id="App1.Ch1.S3.SS1">
  <label>C1</label><title>Conversion to dry molar fractions</title>
      <p id="d2e9641">Flask “concentrations” measured at the gas chromatograph are given in moles of gas per mole of dry air, i.e., molar mixing ratio. To compare them with in situ measurements, the 20 Hz humid air mole fractions <inline-formula><mml:math id="M628" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">gas</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> recorded by the MGA<sup>7</sup> and the mole densities <inline-formula><mml:math id="M630" display="inline"><mml:mrow><mml:msub><mml:mi>d</mml:mi><mml:mi mathvariant="normal">gas</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> from the IRGASON were converted into dry air molar mixing ratios as shown below (compare to <xref ref-type="bibr" rid="bib1.bibx36 bib1.bibx12" id="altparen.64"/>). <list list-type="bullet"><list-item>
      <p id="d2e9680">MGA<sup>7</sup>:<disp-formula id="App1.Ch1.S3.E11" content-type="numbered"><label>C1</label><mml:math id="M632" display="block"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mi mathvariant="normal">gas</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">gas</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula></p></list-item><list-item>
      <p id="d2e9731">IRGASON:<disp-formula id="App1.Ch1.S3.E12" content-type="numbered"><label>C2</label><mml:math id="M633" display="block"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mi mathvariant="normal">gas</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>d</mml:mi><mml:mi mathvariant="normal">gas</mml:mi></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>v</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula><inline-formula><mml:math id="M634" display="inline"><mml:mrow><mml:msub><mml:mi>v</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M635" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M636" display="inline"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mi>R</mml:mi><mml:mo>⋅</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub></mml:mrow><mml:mi>p</mml:mi></mml:mfrac></mml:mstyle></mml:math></inline-formula> is the ambient air molar volume. Following <xref ref-type="bibr" rid="bib1.bibx22" id="text.65"/>, the ambient air temperature <inline-formula><mml:math id="M637" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is derived from the fast-response ultrasonic temperature corrected for humidity effects <xref ref-type="bibr" rid="bib1.bibx45" id="paren.66"/>:<disp-formula specific-use="gather" content-type="numbered"><mml:math id="M638" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="App1.Ch1.S3.E13"><mml:mtd><mml:mtext>C3</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.51</mml:mn><mml:mo>⋅</mml:mo><mml:mi>q</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="App1.Ch1.S3.E14"><mml:mtd><mml:mtext>C4</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi>q</mml:mi><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="App1.Ch1.S3.E15"><mml:mtd><mml:mtext>C5</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>p</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mi>e</mml:mi></mml:mrow><mml:mrow><mml:mi>T</mml:mi><mml:mo>⋅</mml:mo><mml:msub><mml:mi>R</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="App1.Ch1.S3.E16"><mml:mtd><mml:mtext>C6</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi>e</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:msub><mml:mo>⋅</mml:mo><mml:msub><mml:mi>R</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:mo>⋅</mml:mo><mml:mi>T</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>For calculating the specific humidity <inline-formula><mml:math id="M639" display="inline"><mml:mi>q</mml:mi></mml:math></inline-formula>, the slow-response air temperature <inline-formula><mml:math id="M640" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula> measured by a co-located EC100 thermistor at a resolution of 1 s is used.</p></list-item></list></p>
      <p id="d2e10031">The various variables are described in Table <xref ref-type="table" rid="TC1"/>. Note that, for flux calculations in EddyPro, the raw, high-frequency measurements were not converted from molar densities into mixing ratios, but the Webb–Pearman–Leuning (WPL) density corrections <xref ref-type="bibr" rid="bib1.bibx56" id="text.67"/> were applied.</p>
</sec>
<sec id="App1.Ch1.S3.SS2">
  <label>C2</label><title><inline-formula><mml:math id="M641" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>CO<sub>2</sub> estimates from IRGASON and MGA<sup>7</sup> measurements</title>
      <p id="d2e10072">To calculate the expected <inline-formula><mml:math id="M644" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration differences between the updraft and downdraft sample pairs collected in Zurich, the synchronized, despiked, and dry-molar-fraction-converted 20 Hz <inline-formula><mml:math id="M645" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> measurements were averaged over the periods where, according to the 20 Hz REA flags, air should have been collected in the updraft and/or downdraft reservoir. For the IRGASON data, four sampling periods with low correlation between the <inline-formula><mml:math id="M646" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> of the IRGASON and the MGA<sup>7</sup> (Pearson correlation coefficient of <inline-formula><mml:math id="M648" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 0.5) due to the low <inline-formula><mml:math id="M649" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> signal strength of the IRGASON (<inline-formula><mml:math id="M650" display="inline"><mml:mo lspace="0mm">&lt;</mml:mo></mml:math></inline-formula> 90 %) were discarded.</p>

<table-wrap id="TC1"><label>Table C1</label><caption><p id="d2e10147">Description of variables used in the conversion of mole fractions and mole densities to molar mixing ratios.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Variable</oasis:entry>
         <oasis:entry colname="col2">Unit</oasis:entry>
         <oasis:entry colname="col3">Description</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M651" display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mi mathvariant="normal">gas</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">mol mol<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col3">Molar mixing ratio (moles of gas per mole of dry air)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M653" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">χ</mml:mi><mml:mi mathvariant="normal">gas</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">mol mol<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col3">Mole fraction (moles of gas per mole of wet air)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M655" display="inline"><mml:mrow><mml:msub><mml:mi>d</mml:mi><mml:mi mathvariant="normal">gas</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">mol m<sup>−3</sup></oasis:entry>
         <oasis:entry colname="col3">Mole density (moles of gas per unit of volume)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M657" display="inline"><mml:mrow><mml:msub><mml:mi>v</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">m<sup>3</sup> mol<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col3">Ambient air molar volume</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M660" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">K</oasis:entry>
         <oasis:entry colname="col3">Ambient air temperature</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M661" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">K</oasis:entry>
         <oasis:entry colname="col3">Ultrasonic temperature</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M662" display="inline"><mml:mi>q</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">kg kg<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col3">Specific humidity</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M664" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">g m<sup>−3</sup></oasis:entry>
         <oasis:entry colname="col3">Density of water vapor</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M666" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">g m<sup>−3</sup></oasis:entry>
         <oasis:entry colname="col3">Density of dry air</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M668" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">g m<sup>−3</sup></oasis:entry>
         <oasis:entry colname="col3">Air density</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M670" display="inline"><mml:mrow><mml:msub><mml:mi>p</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">kPa</oasis:entry>
         <oasis:entry colname="col3">Air pressure</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M671" display="inline"><mml:mi>e</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">kPa</oasis:entry>
         <oasis:entry colname="col3">Water vapor pressure</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M672" display="inline"><mml:mi>R</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">kPa m<sup>3</sup> K<sup>−1</sup> mol<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col3">Universal gas constant</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M676" display="inline"><mml:mrow><mml:msub><mml:mi>R</mml:mi><mml:mi mathvariant="normal">d</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">kPa m<sup>3</sup> K<sup>−1</sup> g<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col3">Gas constant for dry air</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M680" display="inline"><mml:mrow><mml:msub><mml:mi>R</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">kPa m<sup>3</sup> K<sup>−1</sup> g<sup>−1</sup></oasis:entry>
         <oasis:entry colname="col3">Gas constant for water vapor</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<table-wrap id="TC2"><label>Table C2</label><caption><p id="d2e10688">Differences between <inline-formula><mml:math id="M684" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M685" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> simulated with and without time lags between <inline-formula><mml:math id="M686" display="inline"><mml:mi>w</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M687" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> based on 20 Hz <inline-formula><mml:math id="M688" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> measurements of the MGA<sup>7</sup>. Given are the mean and standard deviation (SD), as well as the 0.25th, 0.5th, 0.75th, and 1st quantiles of the Zurich REA runs (<inline-formula><mml:math id="M690" display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M691" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 74).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="7">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="center"/>
     <oasis:colspec colnum="3" colname="col3" align="center"/>
     <oasis:colspec colnum="4" colname="col4" align="center"/>
     <oasis:colspec colnum="5" colname="col5" align="center"/>
     <oasis:colspec colnum="6" colname="col6" align="center"/>
     <oasis:colspec colnum="7" colname="col7" align="center"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Time lag</oasis:entry>
         <oasis:entry namest="col2" nameend="col3"><inline-formula><mml:math id="M692" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>CO<inline-formula><mml:math id="M693" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">lag</mml:mi></mml:mrow></mml:msub><mml:mo>-</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M694" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry namest="col4" nameend="col7"><inline-formula><mml:math id="M695" display="inline"><mml:mrow><mml:mo>|</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi></mml:mrow></mml:math></inline-formula>CO<inline-formula><mml:math id="M696" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">lag</mml:mi></mml:mrow></mml:msub><mml:mo>-</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M697" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M698" display="inline"><mml:mo>|</mml:mo></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M699" display="inline"><mml:mo>(</mml:mo></mml:math></inline-formula>ms<inline-formula><mml:math id="M700" display="inline"><mml:mo>)</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry namest="col2" nameend="col3"><inline-formula><mml:math id="M701" display="inline"><mml:mo>(</mml:mo></mml:math></inline-formula>ppm<inline-formula><mml:math id="M702" display="inline"><mml:mo>)</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry namest="col4" nameend="col7"><inline-formula><mml:math id="M703" display="inline"><mml:mo>(</mml:mo></mml:math></inline-formula>ppm<inline-formula><mml:math id="M704" display="inline"><mml:mo>)</mml:mo></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Mean</oasis:entry>
         <oasis:entry colname="col3">SD</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M705" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mn mathvariant="normal">0.25</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M706" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mn mathvariant="normal">0.5</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M707" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mn mathvariant="normal">0.75</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M708" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">100</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M709" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.002</oasis:entry>
         <oasis:entry colname="col3">0.010</oasis:entry>
         <oasis:entry colname="col4">0.002</oasis:entry>
         <oasis:entry colname="col5">0.003</oasis:entry>
         <oasis:entry colname="col6">0.007</oasis:entry>
         <oasis:entry colname="col7">0.041</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">200</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M710" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.009</oasis:entry>
         <oasis:entry colname="col3">0.023</oasis:entry>
         <oasis:entry colname="col4">0.004</oasis:entry>
         <oasis:entry colname="col5">0.008</oasis:entry>
         <oasis:entry colname="col6">0.017</oasis:entry>
         <oasis:entry colname="col7">0.100</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">300</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M711" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.018</oasis:entry>
         <oasis:entry colname="col3">0.034</oasis:entry>
         <oasis:entry colname="col4">0.003</oasis:entry>
         <oasis:entry colname="col5">0.014</oasis:entry>
         <oasis:entry colname="col6">0.029</oasis:entry>
         <oasis:entry colname="col7">0.156</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">400</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M712" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.028</oasis:entry>
         <oasis:entry colname="col3">0.047</oasis:entry>
         <oasis:entry colname="col4">0.008</oasis:entry>
         <oasis:entry colname="col5">0.017</oasis:entry>
         <oasis:entry colname="col6">0.042</oasis:entry>
         <oasis:entry colname="col7">0.226</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">500</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M713" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.040</oasis:entry>
         <oasis:entry colname="col3">0.061</oasis:entry>
         <oasis:entry colname="col4">0.011</oasis:entry>
         <oasis:entry colname="col5">0.025</oasis:entry>
         <oasis:entry colname="col6">0.058</oasis:entry>
         <oasis:entry colname="col7">0.285</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">600</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M714" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.051</oasis:entry>
         <oasis:entry colname="col3">0.075</oasis:entry>
         <oasis:entry colname="col4">0.016</oasis:entry>
         <oasis:entry colname="col5">0.033</oasis:entry>
         <oasis:entry colname="col6">0.069</oasis:entry>
         <oasis:entry colname="col7">0.356</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">700</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M715" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.063</oasis:entry>
         <oasis:entry colname="col3">0.088</oasis:entry>
         <oasis:entry colname="col4">0.019</oasis:entry>
         <oasis:entry colname="col5">0.040</oasis:entry>
         <oasis:entry colname="col6">0.085</oasis:entry>
         <oasis:entry colname="col7">0.426</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">800</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M716" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.075</oasis:entry>
         <oasis:entry colname="col3">0.101</oasis:entry>
         <oasis:entry colname="col4">0.021</oasis:entry>
         <oasis:entry colname="col5">0.045</oasis:entry>
         <oasis:entry colname="col6">0.099</oasis:entry>
         <oasis:entry colname="col7">0.494</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</sec>
<sec id="App1.Ch1.S3.SS3">
  <label>C3</label><title><inline-formula><mml:math id="M717" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>CO<sub>2</sub> with delayed collection of air</title>
      <p id="d2e11260">To estimate the potential bias and uncertainty caused by a certain time lag between the wanted and the actual collection of air, the <inline-formula><mml:math id="M719" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> differences between REA sample pairs were calculated by shifting the 20 Hz REA flags forward in time and then averaging over the periods where the updraft or downdraft valves were open. These values were then compared to the <inline-formula><mml:math id="M720" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M721" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> estimates calculated without time lag (Sect. <xref ref-type="sec" rid="App1.Ch1.S3.SS2"/>). Table <xref ref-type="table" rid="TC2"/> shows the statistics of the differences in <inline-formula><mml:math id="M722" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M723" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> with and without the time lag for the 74 REA sampling periods in Zurich where MGA<sup>7</sup> data are available. The increasingly negative mean <inline-formula><mml:math id="M725" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M726" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> differences show that <inline-formula><mml:math id="M727" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M728" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is systematically reduced when the collection of air is delayed. This is to be expected since, in this case, air is collected when the vertical wind is within the deadband and <inline-formula><mml:math id="M729" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluctuations are usually smaller than outside the deadband. With a time lag of 500 ms, as is expected in the Zurich setup, <inline-formula><mml:math id="M730" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M731" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is, on average, 0.04 <inline-formula><mml:math id="M732" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.06 ppm smaller than in the ideal case without a delay; 0.06 ppm is therefore considered to be the mean uncertainty due to a 500 ms delay in the collection of air. For 75 % of the REA runs, the change in <inline-formula><mml:math id="M733" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M734" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is less than 0.06 ppm, whereas the maximum simulated difference is 0.29 ppm. However, there is no systematic bias observed in the comparison between flasks and in situ (Fig. <xref ref-type="fig" rid="F6"/>).</p>
</sec>
<sec id="App1.Ch1.S3.SS4">
  <label>C4</label><title><inline-formula><mml:math id="M735" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>CO<sub>2</sub> with incorrect rinse time</title>
      <p id="d2e11437">Uncertainty in the time an air parcel needs to travel from the inlet to the buffers (about 2 s in Zurich) can cause sampling of unwanted air and loss of wanted air at the beginning and end of an REA run. If the rinse time were to be longer than the actual travel time by <inline-formula><mml:math id="M737" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M738" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">s</mml:mi></mml:mrow></mml:math></inline-formula>), the first <inline-formula><mml:math id="M739" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> seconds of sampled air would be lost, while air from <inline-formula><mml:math id="M740" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> seconds after the intended REA run end would be sampled. Similarly, if the rinse time were to be shorter than the actual travel time by <inline-formula><mml:math id="M741" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, unwanted air remaining in the intake lines would be sampled into the buffers, while the sample air from the last <inline-formula><mml:math id="M742" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> seconds in sampling mode would be lost. This was simulated by discarding and adding 20 Hz <inline-formula><mml:math id="M743" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> measurements from the corresponding time periods and comparing the estimated concentration differences between updraft and downdraft samples (<inline-formula><mml:math id="M744" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>CO<sub>2, Δ<italic>t</italic><sub>r</sub></sub>) with the (ideal) estimates where <inline-formula><mml:math id="M746" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M747" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0 s. The statistics from the 74 REA sampling periods in Zurich with MGA<sup>7</sup> data are shown in Table <xref ref-type="table" rid="TC3"/>. The mean difference between <inline-formula><mml:math id="M749" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M750" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> with and without error in the rinse time is 0.001 ppm and so is well below the <inline-formula><mml:math id="M751" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> measurement uncertainty of the flask samples. For individual REA runs, however, a 2 s overestimation or underestimation of the rinse time can change <inline-formula><mml:math id="M752" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M753" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> by up to 0.5 ppm. The standard deviation of about 0.01 ppm with <inline-formula><mml:math id="M754" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M755" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M756" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 2 s is considered to be the <inline-formula><mml:math id="M757" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M758" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> uncertainty of the Zurich samples due to the 2 s uncertainty in the rinse time. The fact that this standard deviation and the median and maximum differences are about twice as large when <inline-formula><mml:math id="M759" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M760" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M761" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 4 s shows that this uncertainty contribution is site specific.</p>

<table-wrap id="TC3"><label>Table C3</label><caption><p id="d2e11705"><inline-formula><mml:math id="M762" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M763" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> simulated from MGA<sup>7</sup> in situ measurements assuming different errors <inline-formula><mml:math id="M765" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> in the rinse time. Positive or negative <inline-formula><mml:math id="M766" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> indicate whether the rinse time was overestimated or underestimated. Given are the mean and standard deviation (SD), as well as the 0.25th, 0.5th, 0.75th, and 1st quantiles of the differences in relation to the ideal case without <inline-formula><mml:math id="M767" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M768" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0 for the Zurich REA runs (<inline-formula><mml:math id="M769" display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M770" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 74).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="7">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="center"/>
     <oasis:colspec colnum="3" colname="col3" align="right" colsep="1"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="center"/>
     <oasis:colspec colnum="6" colname="col6" align="center"/>
     <oasis:colspec colnum="7" colname="col7" align="center"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M771" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry namest="col2" nameend="col3" colsep="1"><inline-formula><mml:math id="M772" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>CO<inline-formula><mml:math id="M773" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>,</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:msub><mml:mo>-</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M774" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry namest="col4" nameend="col7" align="center"><inline-formula><mml:math id="M775" display="inline"><mml:mrow><mml:mo>|</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi></mml:mrow></mml:math></inline-formula>CO<inline-formula><mml:math id="M776" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>,</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>t</mml:mi><mml:mi mathvariant="normal">r</mml:mi></mml:msub></mml:mrow></mml:msub><mml:mo>-</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M777" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M778" display="inline"><mml:mo>|</mml:mo></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M779" display="inline"><mml:mo>(</mml:mo></mml:math></inline-formula>s<inline-formula><mml:math id="M780" display="inline"><mml:mo>)</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry rowsep="1" namest="col2" nameend="col3" colsep="1"><inline-formula><mml:math id="M781" display="inline"><mml:mo>(</mml:mo></mml:math></inline-formula>ppm<inline-formula><mml:math id="M782" display="inline"><mml:mo>)</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry rowsep="1" namest="col4" nameend="col7" align="center"><inline-formula><mml:math id="M783" display="inline"><mml:mo>(</mml:mo></mml:math></inline-formula>ppm<inline-formula><mml:math id="M784" display="inline"><mml:mo>)</mml:mo></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Mean</oasis:entry>
         <oasis:entry colname="col3">SD</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M785" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mn mathvariant="normal">0.25</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M786" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mn mathvariant="normal">0.5</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M787" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mn mathvariant="normal">0.75</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M788" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M789" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>4</oasis:entry>
         <oasis:entry colname="col2">0.001</oasis:entry>
         <oasis:entry colname="col3">0.02</oasis:entry>
         <oasis:entry colname="col4">0.001</oasis:entry>
         <oasis:entry colname="col5">0.002</oasis:entry>
         <oasis:entry colname="col6">0.008</oasis:entry>
         <oasis:entry colname="col7">0.098</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M790" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>2</oasis:entry>
         <oasis:entry colname="col2">0.001</oasis:entry>
         <oasis:entry colname="col3">0.01</oasis:entry>
         <oasis:entry colname="col4">0</oasis:entry>
         <oasis:entry colname="col5">0.001</oasis:entry>
         <oasis:entry colname="col6">0.004</oasis:entry>
         <oasis:entry colname="col7">0.048</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">2</oasis:entry>
         <oasis:entry colname="col2">0.001</oasis:entry>
         <oasis:entry colname="col3">0.009</oasis:entry>
         <oasis:entry colname="col4">0.001</oasis:entry>
         <oasis:entry colname="col5">0.003</oasis:entry>
         <oasis:entry colname="col6">0.007</oasis:entry>
         <oasis:entry colname="col7">0.037</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">4</oasis:entry>
         <oasis:entry colname="col2">0.001</oasis:entry>
         <oasis:entry colname="col3">0.019</oasis:entry>
         <oasis:entry colname="col4">0.003</oasis:entry>
         <oasis:entry colname="col5">0.006</oasis:entry>
         <oasis:entry colname="col6">0.013</oasis:entry>
         <oasis:entry colname="col7">0.069</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>


</sec>
<sec id="App1.Ch1.S3.SS5">
  <label>C5</label><title><inline-formula><mml:math id="M791" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>CO<sub>2</sub> with variable sampling rate</title>
      <p id="d2e12178">Under real sampling conditions, a certain variability of the flow rate and, thus, an inhomogeneous weighting of the concentration over time are to be expected, adding uncertainty into the <inline-formula><mml:math id="M793" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M794" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> flask measurements. To estimate this uncertainty for each REA flask pair, the <inline-formula><mml:math id="M795" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration differences between updraft and downdraft samples were simulated from the high-frequency <inline-formula><mml:math id="M796" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> measurements of the MGA<sup>7</sup> or, if not available, the IRGASON (compare to Appendix <xref ref-type="sec" rid="App1.Ch1.S3.SS2"/>) but this time with different weightings for each 20 Hz measurement. A total of 103 weighting functions were therefore calculated by interpolating the 103 flow rate time series (temporal resolution of 5 s) recorded by the two mass flow controllers in the loop systems during the Zurich REA runs in relation to the 20 Hz <inline-formula><mml:math id="M798" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> in situ measurements of each REA run. This resulted in 103 <inline-formula><mml:math id="M799" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M800" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> estimates for each REA run. The standard deviations of these estimates were then considered to be the <inline-formula><mml:math id="M801" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M802" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> uncertainty due to flow rate variability. The mean uncertainty of the 103 REA runs was 0.03 <inline-formula><mml:math id="M803" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.05 ppm. As shown in Fig. <xref ref-type="fig" rid="FC1"/>, the magnitude depends on the <inline-formula><mml:math id="M804" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> variability of the ambient air. In the extreme case of a standard deviation of the ambient <inline-formula><mml:math id="M805" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> of more than 50 ppm, the estimated uncertainty can be as high as 0.38 ppm. On the other hand, if <inline-formula><mml:math id="M806" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is approximately constant, the weighting does not matter. In the analysis of <inline-formula><mml:math id="M807" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M808" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, e.g., in the comparison of flasks with in situ measurements (Sect. <xref ref-type="sec" rid="Ch1.S5.SS3"/>), it is therefore recommended to consider the uncertainty contributions for each REA sample individually. For the estimation of <inline-formula><mml:math id="M809" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M810" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, on the other hand, the uncertainty due to flow rate variability is still negligible compared to the <inline-formula><mml:math id="M811" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula> measurement uncertainty (Appendix <xref ref-type="sec" rid="App1.Ch1.S4"/>).</p>

      <fig id="FC1"><label>Figure C1</label><caption><p id="d2e12374">Estimated <inline-formula><mml:math id="M812" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M813" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> uncertainty contribution due to a variability in the sampling flow rate as a function of the standard deviation <inline-formula><mml:math id="M814" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> of <inline-formula><mml:math id="M815" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> of the ambient air during the sampling periods of the 103 REA Zurich samples.</p></caption>
          <graphic xlink:href="https://amt.copernicus.org/articles/18/5349/2025/amt-18-5349-2025-f09.png"/>

        </fig>


</sec>
</app>

<app id="App1.Ch1.S4">
  <label>Appendix D</label><title><inline-formula><mml:math id="M816" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ffCO<sub>2</sub> uncertainties</title>
      <p id="d2e12453">As mentioned in Sect. <xref ref-type="sec" rid="Ch1.S3"/>, <inline-formula><mml:math id="M818" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">photo</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M819" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M820" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M821" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M822" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mo>↑</mml:mo></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mo>↓</mml:mo></mml:msubsup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, which are needed to calculate <inline-formula><mml:math id="M823" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M824" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, are not known but are estimated as given in Table <xref ref-type="table" rid="T1"/>. To illustrate the effects of each variable on the final <inline-formula><mml:math id="M825" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M826" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> estimate, Fig. <xref ref-type="fig" rid="FD1"/> shows the differences between <inline-formula><mml:math id="M827" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M828" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> calculated using the values in Table <xref ref-type="table" rid="T1"/> and <inline-formula><mml:math id="M829" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M830" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> when one of the variables is changed. For the latter calculation, values over the maximum plausible range (based on <inline-formula><mml:math id="M831" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">meas</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M832" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">meas</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) and uncertainties close to mean measurement uncertainties were chosen (2 ‰ for <inline-formula><mml:math id="M833" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M834" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">photo</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> and 1 ppm for <inline-formula><mml:math id="M835" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>). Therefore, <inline-formula><mml:math id="M836" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">ffCO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> plotted on the <inline-formula><mml:math id="M837" display="inline"><mml:mi>y</mml:mi></mml:math></inline-formula> axes represents the absolute error that would be made with the current assumptions if the “true” values were those given on the <inline-formula><mml:math id="M838" display="inline"><mml:mi>x</mml:mi></mml:math></inline-formula> axes.</p>
      <p id="d2e12711">For all samples, higher <inline-formula><mml:math id="M839" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M840" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> lead to higher <inline-formula><mml:math id="M841" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M842" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> estimates. Consequently, with the assumptions of <inline-formula><mml:math id="M843" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M844" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 9 <inline-formula><mml:math id="M845" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 16 ‰ and <inline-formula><mml:math id="M846" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M847" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 5 <inline-formula><mml:math id="M848" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 5 ppm, <inline-formula><mml:math id="M849" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M850" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> would be overestimated or underestimated if the actual values were smaller or larger. The magnitude of the effect depends on the difference <inline-formula><mml:math id="M851" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">photo</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> and is therefore largest for winter samples.</p>
      <p id="d2e12854">The effect of <inline-formula><mml:math id="M852" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">photo</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> is sample-specific because the reference values are different for each sample. However, for most samples, <inline-formula><mml:math id="M853" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M854" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> decreases with increasing <inline-formula><mml:math id="M855" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">photo</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula>.</p>

      <fig id="FD1" specific-use="star"><label>Figure D1</label><caption><p id="d2e12904">Impact of different assumptions for <inline-formula><mml:math id="M856" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> values of <inline-formula><mml:math id="M857" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> differences between up and down flasks due to respiration and biofuels (non-fossil, nf) and photosynthesis (photo) and the non-fossil signal <inline-formula><mml:math id="M858" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M859" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M860" display="inline"><mml:mrow><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mo>↑</mml:mo></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mo>↓</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> based on estimates of <inline-formula><mml:math id="M861" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M862" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M863" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M864" display="inline"><mml:mrow><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">ff</mml:mi><mml:mo>↑</mml:mo></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi>c</mml:mi><mml:mi mathvariant="normal">ff</mml:mi><mml:mo>↓</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>. For each REA sample, the difference in  <inline-formula><mml:math id="M865" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M866" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> with respect to the reference settings used in this study is shown, where <inline-formula><mml:math id="M867" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M868" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 10 <inline-formula><mml:math id="M869" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 16 ‰, <inline-formula><mml:math id="M870" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M871" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 5 <inline-formula><mml:math id="M872" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 5 ppm, and <inline-formula><mml:math id="M873" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">photo</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M874" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M875" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.5</mml:mn><mml:mo>⋅</mml:mo><mml:mo>(</mml:mo><mml:msup><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">meas</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup><mml:mo>↑</mml:mo></mml:msup><mml:mo>+</mml:mo><mml:msup><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">meas</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup><mml:mo>↓</mml:mo></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M876" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 10 ‰. The light-blue ribbons indicate the 1<inline-formula><mml:math id="M877" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula> uncertainty range due to measurement uncertainties.</p></caption>
        <graphic xlink:href="https://amt.copernicus.org/articles/18/5349/2025/amt-18-5349-2025-f10.png"/>

      </fig>

      <fig id="FD2" specific-use="star"><label>Figure D2</label><caption><p id="d2e13171">Contributions to the absolute uncertainty of <inline-formula><mml:math id="M878" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M879" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> estimates (Eq. <xref ref-type="disp-formula" rid="Ch1.E9"/>, with assumptions as given in Table <xref ref-type="table" rid="T1"/>) for each REA sample, collected between July 2022 and March 2023. <inline-formula><mml:math id="M880" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M881" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> measurement uncertainties and an estimated non-fossil <inline-formula><mml:math id="M882" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> difference between updraft and downdraft samples of 5 <inline-formula><mml:math id="M883" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 5 ppm are the main contributors. The <inline-formula><mml:math id="M884" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M885" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> uncertainties due to the sampling process and the laboratory analysis, as well as the assumptions regarding the <inline-formula><mml:math id="M886" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> signatures of photosynthesis, respiration, and biofuels (shown here in black), are negligible.</p></caption>
        <graphic xlink:href="https://amt.copernicus.org/articles/18/5349/2025/amt-18-5349-2025-f11.png"/>

      </fig>

      <p id="d2e13269">Varying the variables over the entire reasonable range, the differences can be as large as 2 ppm and thus of the same order of magnitude as <inline-formula><mml:math id="M887" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M888" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> itself. Nevertheless, due to the large <inline-formula><mml:math id="M889" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> measurement uncertainty (compare to light-blue area in Fig. <xref ref-type="fig" rid="FD1"/>), the deviations from the previous <inline-formula><mml:math id="M890" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M891" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> estimates are not significant.</p>
      <p id="d2e13327">The fact that the uncertainty of <inline-formula><mml:math id="M892" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M893" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> estimates is dominated by the <inline-formula><mml:math id="M894" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> measurement uncertainty can also be seen in Fig. <xref ref-type="fig" rid="FD2"/>. It shows the contributions of each variable to the <inline-formula><mml:math id="M895" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M896" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> uncertainty in ppm for each REA sample pair. The contributions of the <inline-formula><mml:math id="M897" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M898" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> uncertainty (including all aspects summarized in Table <xref ref-type="table" rid="T3"/>) and the assumptions regarding <inline-formula><mml:math id="M899" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M900" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">photo</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> are summarized as “other assumptions and measurements” (black) and are negligible for all samples. As discussed before, the impact of  <inline-formula><mml:math id="M901" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (orange) is especially large for the winter samples but is still secondary compared to the <inline-formula><mml:math id="M902" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> measurement uncertainty (blue). The latter has been reduced from approximately 1.3 to 1.0 ppm as the graphite targets were measured with a new accelerator mass spectrometer starting January 2023. This improved the mean <inline-formula><mml:math id="M903" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M904" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> precision from 2.1 <inline-formula><mml:math id="M905" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.3 ‰ to 1.6 <inline-formula><mml:math id="M906" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.2 ‰. Overall, the analyses show that the choice of <inline-formula><mml:math id="M907" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">photo</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M908" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">nf</mml:mi><mml:mn mathvariant="normal">14</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M909" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">nf</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> has little effect on the <inline-formula><mml:math id="M910" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>ff<inline-formula><mml:math id="M911" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> estimate due to the current <inline-formula><mml:math id="M912" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula><inline-formula><mml:math id="M913" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">14</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> measurement precision.</p>
</app>
  </app-group><notes notes-type="codedataavailability"><title>Code and data availability</title>

      <p id="d2e13563">The logger program and the data supporting this publication are provided at <ext-link xlink:href="https://doi.org/10.5281/zenodo.13926680" ext-link-type="DOI">10.5281/zenodo.13926680</ext-link> <xref ref-type="bibr" rid="bib1.bibx25" id="paren.68"/>.</p>
  </notes><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d2e13575">IL and SH developed the idea of ffCO<sub>2</sub> REA measurements. VL, LB, RK, and ME conducted initial proof-of-principle tests and designed, built, and tested the REA flask sampler together with AK. AC and JH performed numerical proof-of-concept simulations and developed the logger code. JH, RH, AC, and SS operated the IRGASON and MGA<sup>7</sup> in Zurich and provided data for sample selection and simulations of flask concentration differences. AK, SH, and IL collected and selected the REA samples during the Zurich campaign. PR exchanged the flasks and maintained the REA sampler in Zurich. XG and JDC were responsible for the flask measurements at the FCL and the CRL, and AJ and SP were responsible for the respective data processing and quality control. AK performed the analysis, created the figures, and prepared the paper with contributions from all of the co-authors.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d2e13599">The contact author has declared that none of the authors has any competing interests.</p>
  </notes><notes notes-type="disclaimer"><title>Disclaimer</title>

      <p id="d2e13605">Publisher’s note: Copernicus Publications remains neutral with regard to jurisdictional claims made in the text, published maps, institutional affiliations, or any other geographical representation in this paper. While Copernicus Publications makes every effort to include appropriate place names, the final responsibility lies with the authors.</p>
  </notes><ack><title>Acknowledgements</title><p id="d2e13612">The authors have received funding from ICOS Cities, a.k.a. the Pilot Applications in Urban Landscapes – Towards integrated city observatories for greenhouse gases (PAUL) project, from the European Union's Horizon 2020 research and innovation program under grant agreement no. 101037319. Financial support from ICOS Switzerland (ICOS-CH) Phase 3 (Swiss National Science Foundation, grant no. 20FI20_198227) is also acknowledged. Additional support was provided by internal funds and staff at the Universities of Heidelberg and Freiburg and the Max Planck Institute for Biogeochemistry in Jena. We thank Lukas Emmenegger (EMPA, Switzerland) for negotiating and managing the installation of the Zurich Hardau site, Roland Vogt (University of Basel, Switzerland) for installing the eddy covariance (IRGASON) system in Zurich, Sophie Emberger (ETH Zurich, Switzerland) for maintaining the eddy covariance site, and Felix Baab (University of Freiburg, Germany) for constructing the REA inlets and tower valves. In addition, we gratefully thank Steffen Knabe (ICOS FCL, Germany) and the staff of the ICOS FCL and the ICOS CRL for measuring the test and REA flasks. When comparing the REA flask concentrations with the IRGASON <inline-formula><mml:math id="M916" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> measurements, we appreciated the fruitful discussions with Ivan Bogoev (Campbell Scientific Inc., USA, Logan).</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d2e13628">This research has been supported by the EU Horizon 2020 (grant no. 101037319).This open-access publication was funded  by the University of Freiburg.</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d2e13639">This paper was edited by Daniela Famulari and reviewed by two anonymous referees.</p>
  </notes><ref-list>
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