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  <front>
    <journal-meta><journal-id journal-id-type="publisher">AMT</journal-id><journal-title-group>
    <journal-title>Atmospheric Measurement Techniques</journal-title>
    <abbrev-journal-title abbrev-type="publisher">AMT</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Atmos. Meas. Tech.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1867-8548</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/amt-19-4583-2026</article-id><title-group><article-title>Voltage scanning to calibrate Multi-Reagent Chemical Ionization Mass Spectrometers (MR-CIMS): from signal to sensitivity</article-title><alt-title>Voltage scanning to calibrate Multi-Reagent Chemical Ionization Mass Spectrometers</alt-title>
      </title-group>
      <contrib-group>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Wang</surname><given-names>Yuwei</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2">
          <name><surname>Voliotis</surname><given-names>Aristeidis</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-9710-9851</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Matthews</surname><given-names>Emily</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Wu</surname><given-names>Rongrong</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Roska</surname><given-names>Milan</given-names></name>
          
        <ext-link>https://orcid.org/0009-0001-2806-7755</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Adam</surname><given-names>Max Gerrit</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-8066-375X</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Dubus</surname><given-names>René</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Kesper</surname><given-names>Lukas</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Rohrer</surname><given-names>Franz</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Wegener</surname><given-names>Robert</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-2042-9333</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Winter</surname><given-names>Benjamin</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Bates</surname><given-names>Kelvin H.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-7544-9580</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>He</surname><given-names>Quanfu</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-3229-8206</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Hohaus</surname><given-names>Thorsten</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-5722-6244</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Grasse</surname><given-names>Achim</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Tillmann</surname><given-names>Ralf</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-0648-6622</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Wahner</surname><given-names>Andreas</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-8948-1928</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Wang</surname><given-names>Hui</given-names></name>
          
        <ext-link>https://orcid.org/0009-0001-3773-7642</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Wesolek</surname><given-names>Christian</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-4475-2816</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Wedel</surname><given-names>Sergej</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Wu</surname><given-names>Yizhen</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Zorn</surname><given-names>Sören R.</given-names></name>
          
        <ext-link>https://orcid.org/0009-0007-4827-1642</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>Canagaratna</surname><given-names>Manjula</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-8803-4007</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>Worsnop</surname><given-names>Douglas</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff6">
          <name><surname>Lopez-Hilfiker</surname><given-names>Felipe</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Gkatzelis</surname><given-names>Georgios I.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-4608-3695</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2">
          <name><surname>Coe</surname><given-names>Hugh</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-3264-1713</ext-link></contrib>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Bannan</surname><given-names>Thomas J.</given-names></name>
          <email>thomas.bannan@manchester.ac.uk</email>
        <ext-link>https://orcid.org/0000-0002-1760-6522</ext-link></contrib>
        <aff id="aff1"><label>1</label><institution>Department of Earth and Environmental Science, University of Manchester, Manchester, M13 9PL, United Kingdom</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>National Centre for Atmospheric Science, University of Manchester, Manchester M13 9PL, United Kingdom</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>ICE-3: Troposphere, Institute of Climate and Energy Systems, Forschungszentrum Jülich, 52428 Jülich, Germany</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>Department of Mechanical Engineering, University of Colorado, Boulder, CO, 80305, USA</institution>
        </aff>
        <aff id="aff5"><label>5</label><institution>Aerodyne Research Inc., Billerica, Massachusetts 01821, USA</institution>
        </aff>
        <aff id="aff6"><label>6</label><institution>Tofwerk AG, Thun, 3645, Switzerland</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Thomas J. Bannan (thomas.bannan@manchester.ac.uk)</corresp></author-notes><pub-date><day>14</day><month>July</month><year>2026</year></pub-date>
      
      <volume>19</volume>
      <issue>13</issue>
      <fpage>4583</fpage><lpage>4599</lpage>
      <history>
        <date date-type="received"><day>7</day><month>December</month><year>2025</year></date>
           <date date-type="rev-request"><day>19</day><month>January</month><year>2026</year></date>
           <date date-type="rev-recd"><day>9</day><month>May</month><year>2026</year></date>
           <date date-type="accepted"><day>13</day><month>June</month><year>2026</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2026 Yuwei Wang et al.</copyright-statement>
        <copyright-year>2026</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://amt.copernicus.org/articles/19/4583/2026/amt-19-4583-2026.html">This article is available from https://amt.copernicus.org/articles/19/4583/2026/amt-19-4583-2026.html</self-uri><self-uri xlink:href="https://amt.copernicus.org/articles/19/4583/2026/amt-19-4583-2026.pdf">The full text article is available as a PDF file from https://amt.copernicus.org/articles/19/4583/2026/amt-19-4583-2026.pdf</self-uri>
      <abstract><title>Abstract</title>

      <p id="d2e362">Chemical ionization mass spectrometry (CIMS) offers high time-resolution measurements for diverse compounds, but atmospheric quantification remains challenging. Here, we combine a recently published method for determining the collision limit using a single reagent ion with a voltage scanning approach for assessing the relative sensitivities of diverse adduct ions. We used voltage scanning in a Multi-Reagent Chemical Ionization Mass Spectrometer (MR-CIMS) to assess ion–molecule adduct strength. The sensitivities to most detectable compounds were calculated based on this relationship using a collision-limit sensitivity of 13.87 <inline-formula><mml:math id="M1" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.69 ncps pptv<sup>−1</sup> determined for <inline-formula><mml:math id="M3" display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula>-pinene using the benzene channel. Following previously published work, the collision limit sensitivity of the other reagent ions used was assumed to be equal to that of the benzene channel and was further examined using the binding energy and measured sensitivity of nitrophenol in the bromide channel. Calibration of 13 molecules, including nitric acid, formic acid, and oxygenated VOCs, was performed to obtain a universal relationship between the sensitivities and the voltage at which the adduct signal halves (dV<sub>50</sub>). Quantification uncertainties stayed below 20 % for compounds with sensitivities above 5.69 and 5.30 ncps pptv<sup>−1</sup> in bromide and iodide channels, respectively. High-level quantum chemical calculations indicated that the detected compounds predominantly form hydrogen-bonded clusters with bromide and iodide. In a large photochemical chamber, estimated sensitivities of more than 260 compounds were determined. Based on this, we achieved their quantification with multiple negative reagent ions. The quantification was validated by comparing nitrous acid concentrations measured using MR-CIMS with those obtained from a calibrated iterative cavity-enhanced differential optical absorption spectroscopy (ICAD) (<inline-formula><mml:math id="M6" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M7" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.891, slope <inline-formula><mml:math id="M8" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 1.24). Six of the organic compounds were taken as examples to show the results of this method for a daytime oxidation chamber experiment. The measurement uncertainties for these pptv-level compounds ranged from 8.9 % to 39.0 %, depending on their sensitivities and concentrations. Further theoretical and experimental investigations showed that halogen compounds can form intermolecular halogen bonds with strength comparable to their intramolecular bonds, preventing this approach from being applied to determine their sensitivities. This work highlights that voltage scanning is a useful approach to the determination ion–molecule adduct sensitivity in CIMS.</p>
  </abstract>
    
<funding-group>
<award-group id="gs1">
<funding-source>Natural Environment Research Council</funding-source>
<award-id>NE/W009307/1</award-id>
</award-group>
<award-group id="gs2">
<funding-source>European Research Council</funding-source>
<award-id>Starting Grant CHANEL (grant no. 101076276)</award-id>
</award-group>
<award-group id="gs3">
<funding-source>Integrated Carbon Observation System</funding-source>
<award-id>ATMO-ACCESS Transnational Access program grant agreement No 101008004</award-id>
</award-group>
<award-group id="gs4">
<funding-source>European Research Council</funding-source>
<award-id>Consolidator Grant ADAPT (grant No. 101002728)</award-id>
</award-group>
</funding-group>
</article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d2e447">Chemical ionization mass spectrometry (CIMS) is a powerful analytical method providing high time resolution measurements for a wide range of compounds (Bertram et al., 2011). It uses soft ionization to charge analytes and has the advantage of allowing in situ measurements that preserve the structure of the analytes (Riva et al., 2019; Zhang et al., 2023). Among its many applications, the measurement of organics, including volatile organic compounds (VOCs) and their less volatile oxidation products, is one of the most prominent and critical. This capability meets the evolving demands of atmospheric chemistry research, addressing important questions regarding the formation of secondary organic aerosol (SOA), the cycling of atmospheric reactive nitrogen, and the sinks and sources of atmospheric radicals (Ehn et al., 2014; Lee et al., 2018; Yuan et al., 2017).</p>
      <p id="d2e450">Quantifying detected compounds is fundamental to CIMS but is challenging particularly in clustering ion chemistry. This is due to two main factors: first, certain reagent ions, e.g., iodide, and bromide, are more sensitive to oxygenated compounds, for which commercially available and atmospherically relevant standards are often lacking; second, the sensitivities of some reagent ions, e.g., ammonium and iodide, span a wide range, complicating accurate quantification (Bianchi et al., 2019; Lee et al., 2014; Rissanen et al., 2019; Xu et al., 2022; Zaytsev et al., 2019). Over the past decades, several investigations have sought to characterize the sensitivity of CIMS to compounds for which commercial standards are unavailable. Huey et al. (1995) measured accurate reaction rate constants for SF<inline-formula><mml:math id="M9" display="inline"><mml:mrow><mml:msubsup><mml:mi/><mml:mn mathvariant="normal">6</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> and I<sup>−</sup> with various atmospheric analytes, thereby firstly validating that the detected ions represent the target analytes rather than interferences and establishing a quantitative link between ion-molecule rate constants and signal responses in CIMS (Huey et al., 1995). In addition, the community often adopts the strategy of synthesizing target analytes for the direct calibration of CIMS, including peroxyacetyl nitrate (Slusher et al., 2004; Veres and Roberts, 2015), organic hydroperoxides (Crounse et al., 2006), nitryl chloride (ClNO<sub>2</sub>) and dinitrogen pentoxide (N<sub>2</sub>O<sub>5</sub>) (Kercher et al., 2009), peroxynitric acid (Veres et al., 2015), chloramines (Chen et al., 2025; Wang et al., 2023), tertiary isoprene nitrates (Vasquez et al., 2020), and biogenic hydroxy nitrates (Robinson et al., 2024).</p>
      <p id="d2e501">For analytes that are difficult to synthesize or whose structures and functionalities are uncertain, using semi-quantitative calibration or quantum model estimation provides a practical alternative for estimating sensitivities (Iyer et al., 2016; Lee et al., 2014; Lopez-Hilfiker et al., 2016). Very recently, Aggarwal et al. (2025) conducted calibrations on 39 Tofwerk CIMS, statistically demonstrating that the collision limit can be used to put constraints on sensitivity from one ion mode polarity to another, as long as the critical parameters are held constant, with the discrepancy between the two polarities being within 5 %. This enables the determination of the collision limit of negative reagent ions to be made from the positive channels, which are often easier to complete, simplifying calibration requirements across various reagent ion chemistries (Aggarwal et al., 2025). Under this condition, once the distributions of relative sensitivities to detectable compounds are obtained, the true sensitivities can be readily calculated. To achieve that, voltage scanning is one of the most frequently used semi-quantitative calibration methods (Lopez-Hilfiker et al., 2016; Song et al., 2024; Xu et al., 2022; Zaytsev et al., 2019). It is a procedure to determine the estimated sensitivity of reagent ion adducts by imparting energy to the ions via electric fields. The binding energy is inferred from the change in applied voltage at which the adduct signal drops to half of its original intensity. This voltage change is referred to as dV<sub>50</sub>. Compounds' sensitivities can be estimated once the empirical relationship between binding energies and sensitivities is established. Lopez-Hilfiker et al. (2016) was the first to report the utilization of the voltage scanning method to constrain the relative sensitivities of I-CIMS to multifunctional organic molecules. Song et al. (2024) established a comprehensive characterization on the relative sensitivity of I-CIMS to multifunctional compounds. An increase in sensitivity was observed with the addition of polar functional groups to the compound, such as keto, hydroxyl, and carboxylic acid groups. Semi-quantitative equations were established for monophenols, monoacids, polyphenol or diacid species, and species with multiple functional groups in I-CIMS. Despite the useful implementation of the voltage scanning technique in some works, it is still not widely adopted with CIMS users.</p>

      <fig id="F1" specific-use="star"><label>Figure 1</label><caption><p id="d2e516">Schematic of the MR-CIMS structure. Gas flow paths are indicated in red, and the electrodes/voltages adjusted during voltage scanning are highlighted by purple dashed arrows and texts. Explanatory annotations are denoted by blue dashed arrows and words. Pressures of the IMR, SQ (short quadrupole), and BSQ (big-segmented quadruple), as well as the temperature of the IMR, are labeled to facilitate understanding of the operating conditions in MR-CIMS.</p></caption>
        <graphic xlink:href="https://amt.copernicus.org/articles/19/4583/2026/amt-19-4583-2026-f01.png"/>

      </fig>

      <p id="d2e525">Knowledge on the sensitivities of CIMS and the voltage scanning method is still insufficient. First, this method has not been evaluated for the many reagent ions that are used for characterizing the range of organics of interest. The distribution of Br-CIMS sensitivities to compounds with different functionalities, for example, is not well understood. Second, for the sake of safety and minimizing side reactions, some CIMS utilize a grounded flow tube ion–molecule reactor (IMR), such as the newly developed Vocus AIM (adduct ionization mechanism) IMR (Riva et al., 2024). The voltage scanning protocol needs to be refined for these reactors, including the additional tuning necessary to keep transmission from the IMR to the quadrupoles constant when applying voltage scanning methods. The schematic diagram of this process is shown in Fig. 1 and its details will be discussed more in the following sections. Third, as voltage scanning essentially determines the binding energy of the adducts through cluster dissociation, which significantly reduces the signals of the analytes, voltage scanning is only suitable for analytes with a sufficient signal-to-noise ratio (SNR) in the mass spectrum. The SNR threshold required to make voltage scanning applicable is currently unknown.</p>
      <p id="d2e528">Here we present an approach to estimating sensitivities of a wide range of compounds using multiple reagent ion chemistries in the grounded Vocus AIM IMR. The collision limit sensitivity of a multi-reagent ion CIMS was determined based on the method reported by Aggarwal et al. (2025). Based on this, sensitivities were obtained with voltage scanning. We assessed the performance of the approach using a wide range of calibrants, chamber experiments and quantum chemical calculations. Calibration experiments were conducted on a Multi-Reagent Chemical Ionization time-of-flight Mass Spectrometer (MR-CIMS, Vocus B2, Tofwerk AG, Switzerland) (Aggarwal et al., 2025). The MR-CIMS is a newly developed fast-switching CIMS equipped with four reagent ions, i.e., bromide (Br<sup>−</sup>) and iodide (I<sup>−</sup>) anions, acetone dimers (C<sub>6</sub>H<sub>13</sub>O<sup>+</sup>) and benzene cations (C<sub>6</sub>H<inline-formula><mml:math id="M21" display="inline"><mml:mrow><mml:msubsup><mml:mi/><mml:mn mathvariant="normal">6</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>) that are each measured over a 2 s cycle. This allows measurements of a much wider range of compounds with a single instrument, making it ideal for mobile measurements, such as on an aircraft. We focus on the sensitivities and binding energies of adducts in the two negative channels, which are widely utilized in detecting oxygenated organic molecules, radicals, and halogen compounds in the atmosphere (Albrecht et al., 2019; Finkenzeller et al., 2023; Lee et al., 2014; Mohr et al., 2019; Tham et al., 2021).</p>
      <p id="d2e598">Direct calibration experiments were performed to determine the relationship between the sensitivity to organics and dV<sub>50</sub>. This voltage scanning method was further demonstrated to be applicable to other CIMS using Vocus AIM IMR. To better investigate the sensitivities to compounds with different functionalities, quantum chemistry calculations were performed at the DLPNO-CCSD(T)/def2-QZVPPD level to determine the cluster formation enthalpies of the ion–molecule clusters and to obtain their most stable geometries. The calculated enthalpies agreed well with the experimental dV<sub>50</sub>, except for nitric acid, where water molecules accommodated their excess energy and thus enhanced their sensitivities, and 4-nitrophenol, which is charged at the collision limit. Organic compounds formed hydrogen bonding with Br<sup>−</sup> to generate ion–molecule clusters similar to the conditions in I-CIMS reported by Iyer et al. (2016). Both hydroxyl and carboxyl groups can form hydrogen bonds, while the carbonyl group can enhance molecular polarity and thereby strengthen adjacent hydrogen bonding.</p>
      <p id="d2e628">MR-CIMS was deployed in the SAPHIR-CHANEL campaign during the summer of 2024, which conducted a series of oxidation experiments in the outdoor SAPHIR chamber using a mix of VOCs at atmospheric concentrations, including volatile chemical products (VCPs) (Coggon et al., 2021; Gkatzelis et al., 2021; McDonald et al., 2018), cooking (Coggon et al., 2024), gasoline, diesel, and biogenic VOCs. Voltage scanning was conducted and utilized to estimate the sensitivity of MR-CIMS to the gaseous compounds in the chamber. The sensitivities of a total of 290 organic compounds clustered with bromide and 264 organic compounds clustered with iodide were estimated. Their dV<sub>50</sub> distributions in relation to the oxygen content were determined. Furthermore, the abundance range of compounds to which the voltage scanning method was applicable in MR-CIMS was also investigated. Based on the nitrous acid (HONO) sensitivity derived from the voltage scanning, we calculated the HONO concentrations measured by MR-CIMS. The results matched those from another calibrated instrument running concurrently, validating the reliability of the voltage scanning. Additionally, we quantified several typical organic compounds originating from various sources in a typical multi-source chamber experiment, whose measurement uncertainties ranged from 8.9 % to 39.0 %, with values dependent on compound sensitivities and concentrations, thereby demonstrating the broad applicability of the voltage scanning technique. Furthermore, halogen compounds were examined with voltage scanning, but the similarity between their intramolecular binding energies and the halogen binding energies formed with reagent ions made it difficult to obtain meaningful dV<sub>50</sub> values.</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Experimental section</title>
<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>Instrumentation</title>
      <p id="d2e664">MR-CIMS is a newly designed instrument equipped with a bipolar time-of-flight (TOF) mass spectrometer, which can simultaneously measure cations and anions without inner interference.</p>
      <p id="d2e667">The design and geometric structure of the IMR of MR-CIMS, i.e., Vocus AIM (Adduct Ionization Mechanism) IMR, has been discussed in detail elsewhere (Riva et al., 2024). The IMR and short quadrupole (SQ) were operated at pressures of around 52 and 1.50 mbar, respectively. In addition, the IMR was heated to 45 °C by a high-precision electronic heater. The time series and histograms of IMR pressure, temperature, and SQ pressure during a representative experiment are provided in Fig. S1 in the Supplement to demonstrate stability. MR-CIMS was operated with four different reagent ions: bromide (Br<sup>−</sup>), acetone dimers (C<sub>6</sub>H<sub>13</sub>O<sup>+</sup>), iodide (I<sup>−</sup>), and benzene cations (C<sub>6</sub>H<inline-formula><mml:math id="M33" display="inline"><mml:mrow><mml:msubsup><mml:mi/><mml:mn mathvariant="normal">6</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>). These reagent ions were generated via the charging of dibromomethane (CH<sub>2</sub>Br<sub>2</sub>, Sigma Aldrich, <inline-formula><mml:math id="M36" display="inline"><mml:mo>≥</mml:mo></mml:math></inline-formula> 99 %), acetone (C<sub>3</sub>H<sub>6</sub>O, Sigma Aldrich, <inline-formula><mml:math id="M39" display="inline"><mml:mo>≥</mml:mo></mml:math></inline-formula> 99.9 %), methyl iodide (CH<sub>3</sub>I, Sigma Aldrich, 99.8 %), and benzene (C<sub>6</sub>H<sub>6</sub>, Sigma Aldrich, <inline-formula><mml:math id="M43" display="inline"><mml:mo>≥</mml:mo></mml:math></inline-formula> 99.9 %), respectively, by two Vacuum Ultra-Violet sources (VUV) (Ji et al., 2020). These reagents, emitted from the permeation tubes (Towerk AG, Switzerland) heated to 80 °C, were continuously delivered to the VUV sources via two independent nitrogen flows at 250 sccm (standard cubic centimeters per minute) each and were around 1 : 100 by volume. In each VUV source, a pair of reagents was introduced: one to produce positive ions and the other to generate negative ions. Iodide and benzene cations were produced in one source, and bromide and acetone dimers in the other. Equipped with a fast-switch high voltage mode, the two VUV sources were alternately operated at a frequency of 1 Hz to generate one or other of the two pairs of positive and negative reagent ions. Humidity of samples is well known to have a significant influence on the sensitivity of CIMS (Huey, 2007; Lee et al., 2014). To avoid variations in relative humidity (RH), a dopant flow ranging from 0 to 30 sccm was directed to introduce water vapor from a heated deionized water bottle to the IMR. The flow rate was automatically adjusted at a frequency of 0.5 Hz based on the H<sub>2</sub>OI<sup>−</sup> <inline-formula><mml:math id="M46" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> I<sup>−</sup> ratio (hereafter water ratio) measured in the iodide channel by the TofdaqViewer2 (Tofwerk AG, Switzerland). The target water ratio was set as 0.60, which was around the maximum ratio measured in the SAPHIR chamber, corresponding to a ratio of 0.65 for H<sub>2</sub>OBr<sup>−</sup> <inline-formula><mml:math id="M50" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> Br<sup>−</sup> in the bromide channel. Due to this dopant flow, the RH in the IMR was constant throughout the campaign. Humidity regulation was paused during voltage scanning because the dissociation of adducts changes the water ratio. The time series and histograms of the water ratio in the iodide and bromide channels are provided in Fig. S2 as evidence of stability.</p>
      <p id="d2e892">MR-CIMS can identify analytes based on exact molecular weight at high precision. The mass resolution, <inline-formula><mml:math id="M52" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>m</mml:mi></mml:mrow></mml:math></inline-formula>, for cations and anions are around 5000 and 5300, respectively, at a mass-to-charge ratio (<inline-formula><mml:math id="M53" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:math></inline-formula>) of 200 Th. Data consist of four segments, each corresponding to a different reagent ion, and were recorded with a time resolution of 0.5 Hz. For data processing, each segment was averaged by a factor of 2and thus had an integration time of 1 s. During measurement and voltage scanning, measured analyte signals in counts per second (cps) were ratioed to the total reagent ion signal in cps (determined as the sum of the reagent ion and hydrated reagent ions) and then multiplied by the standard total reagent ion signal value of 1 million cps to yield a sensitivity in units of normalized counts per sec (ncps).</p>
</sec>
<sec id="Ch1.S2.SS2">
  <label>2.2</label><title>Voltage scanning method</title>
      <p id="d2e929">Voltage scanning is a method developed to experimentally estimate the binding energy of ion–molecule adducts formed by chemical ionization in the IMR. A schematic of the main elements of MR-CIMS including the IMR and quadrupoles, highlighting the region where the voltage was scanned, and the transfer of molecular ions to the TOF MS are shown in Fig. 1. Three electrodes/voltages were adjusted in upstream of big-segmented quadruple (BSQ), including Reactor back, Quad DC, and Skimmer. Reactor back is the direct currency (DC) potential applied at pinhole between IMR and SQ, which is set as 0 V in the routine operation. Quad DC refers to the DC potential applied to the four quadrupole rods that carry the radio frequency (RF) field of SQ. Skimmer voltage corresponds to the DC potential applied to the skimmer electrode, which controls ion extraction and transmission efficiency across the SQ-BSQ interface. An increase in the voltage difference between the BSQ and region upstream of it induces dissociation of the adduct. The binding energy of each adduct can be represented by the voltage gap at which its signal decreases to half of that observed at the start of voltage scanning (dV<sub>50</sub>). Compounds reacting with the reagent ion at the collision limit typically possess the highest dV<sub>50</sub> as their ion–molecule adducts are likely to have strongest binding energy.</p>
      <p id="d2e950">The Vocus AIM IMR is configured to be electrically grounded, which differs from earlier CIMS designs (Lopez-Hilfiker et al., 2016). For anions, an increase in the voltage gap between SQ and BSQ will lower the potential of SQ relative to the grounded IMR and thus can generate a reing electric field at the reactor exit. This will reflect ions back toward the IMR because anions are decelerated when moving toward regions of lower electric potential. A similar argument applies to cations in positive channels. This effect results in ion repulsion, i.e., reduced ion transmission, and can result in a decrease in ion signals. Consequently, the measured signal decay rate reflects not only the declustering processes occurring after Skimmer, which indicates the cluster binding energy, but also variations in ion transmission across the IMR–SQ interface. Since voltage scanning is used to derive the cluster binding energy based on the signal decay, we have to minimize the above issue and ensure that signal decay rate is primarily determined by cluster binding energy.</p>
      <p id="d2e953">Total ion counts (TIC) serve as a useful indicator of changes in ion transmission efficiency (Fig. S3) (Lopez-Hilfiker et al., 2016). A pinhole bias of <inline-formula><mml:math id="M56" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>4 V in negative channels and <inline-formula><mml:math id="M57" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>4 V in positive channels is implemented across the IMR–SQ interface, i.e., Reactor Back, at the start of scanning. This approach results in a fixed ion transmission offset from IMR to pinhole, but it ensures that the subsequent signal decay is dominated by variations in relative binding energies rather than by transmission artefacts from pinhole to SQ. This behavior arises because the strong gas expansion from IMR (<inline-formula><mml:math id="M58" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 52 mbar) into SQ (<inline-formula><mml:math id="M59" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 1.5 mbar) can efficiently drive the initial transport of ions, allowing anions to be transmitted with comparable efficiency from pinhole to SQ. It makes ion transmission relatively insensitive to variations in the SQ potential as long as the retarding electric field across the pinhole-SQ region remains moderate. Although ion transmission eventually decreases as the field becomes sufficiently strong, most clusters have already reached their dV<sub>50</sub> by that stage.</p>
      <p id="d2e993">The increased voltage gap between SQ and BSQ accelerates the velocity of ions. Clusters collided with buffer gas at the entrance of BSQ, and those with higher binding energies required larger kinetic energies to dissociate. Thus, their strengths were inferred from the voltage gaps needed for efficient dissociation. The detailed voltage settings during the scanning are listed in Table S1. The duration for each step of a scan was 20 s and the whole scan lasted for no more than 7 min. For a certain compound, the decay of the adduct signal during a single voltage scan was fitted with a sigmoid function. Based on this, the dV<sub>50</sub> was determined as the bias voltage that was applied to decrease the signal to half its original value. The humidity of samples can influence the dV<sub>50</sub> of analytes. We measured the dV<sub>50</sub> of 3-nitrophenols, acetic acid, propylene glycol, and butyric acid at different dopant flow rates. A slight shift of <inline-formula><mml:math id="M64" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>0.5V in dV<sub>50</sub> can be observed for all of these compounds when the water ratio increases from 0 (at 0 sccm dopant flow) to 0.75 (at 50 sccm dopant flow) (Fig. S4). Thus, the comparability of dV<sub>50</sub> is ensured only when the RH within IMR is constant between sampling and calibration.</p>
      <p id="d2e1050">Benzene reagent ions mainly charge organic compounds through charge transfer rather than adduct formation, whereas acetone dimers charge them with a combination of both mechanisms. This complicates the interpretation of voltage scanning results in these two positive channels. Therefore, this paper focuses on the results obtained from the bromide and iodide channels.</p>
</sec>
<sec id="Ch1.S2.SS3">
  <label>2.3</label><title>Instrument Calibration</title>
      <p id="d2e1061">A series of species were calibrated with different methods to determine the relationship between dV<sub>50</sub> and sensitivity of MR-CIMS to the corresponding compound. Nitric acid and formic acid were calibrated with gravimetrically calibrated permeation tubes (VICI, USA). Chlorine was calibrated with a standard gas cylinder (BOC Limited, UK). Oxygenated volatile organic compounds were calibrated with a liquid calibration system (LCS, Tofwerk AG., Switzerland). The lists of 14 calibrants, methods, and calibration results are given in the Supplement (Table S2).</p>
</sec>
<sec id="Ch1.S2.SS4">
  <label>2.4</label><title>Quantum chemistry calculations</title>
      <p id="d2e1081">Theoretical calculations were performed to confirm the experimentally determined binding enthalpies and to gain a deeper understanding of the formation of ion–molecule clusters. The conformers of compounds and clusters were initially generated using Avogadro software (version 1.101.0) and pre-optimized using the Merck molecular force field (MMFF94) (Halgren, 1996) or, when iodine or iodide was present in the clusters, with Universal Force Field (UFF) (Rappé et al., 1992). Geometry optimizations and vibrational frequencies were performed using the long-range corrected hybrid density function theory methods at the <inline-formula><mml:math id="M68" display="inline"><mml:mi mathvariant="italic">ω</mml:mi></mml:math></inline-formula>B97X-D3/def2-TZVPPD level with TightSCF convergence, employing the RIJCOSX approximation and def2/J auxiliary basis, as implemented in ORCA software (version 6.0.0). Single point electronic energy corrections were computed on the lowest energy geometry at the DLPNO-CCSD(T)/def2-QZVPPD level with the RIJCOSX approximation, AutoAux basis generation, and TightSCF convergence in ORCA. We generally followed the computation theory utilized in the previous investigation (Wang et al., 2021), with additional diffuse functions employed in the single point electronic energy calculations to improve accuracy for the anions. The cluster formation or dissociation enthalpy was computed at 298.15 K, consistent with previous studies (Iyer et al., 2016; Wang et al., 2021). This is because, though the IMR was heated to 45 °C (343.15 K), the quadrupoles and ion optics, where the primary fragmentation reactions occurred, remained near room temperature. Meanwhile, enthalpy values are considerably less sensitive to temperature variations than Gibbs free energies. The cluster formation enthalpy in the bromide channel was calculated for the majority of the calibrated compounds. However, only one aromatic compound, 4-nitrophenol, was included owing to the high computational cost associated with aromatic systems. In the iodide channel, the cluster formation enthalpy of C<sub>2</sub>H<sub>4</sub>O<inline-formula><mml:math id="M71" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mrow class="chem"><mml:mi class="Radical" mathvariant="normal">⚫</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>I<sup>−</sup>, C<sub>2</sub>H<sub>4</sub>O<inline-formula><mml:math id="M75" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mrow class="chem"><mml:mi mathvariant="normal" class="Radical">⚫</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>I<sup>−</sup>, C<sub>2</sub>H<sub>2</sub>O<inline-formula><mml:math id="M79" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mrow class="chem"><mml:mi class="Radical" mathvariant="normal">⚫</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>I<sup>−</sup>, and C<sub>2</sub>H<sub>6</sub>O<inline-formula><mml:math id="M83" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mrow class="chem"><mml:mi mathvariant="normal" class="Radical">⚫</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>I<sup>−</sup> were computed to validate the modeling results reported by Iyer et al., which were obtained by geometry optimization at the B3LYP/6-31G* level and single-point energy calculations at the DLPNO-CCSD(T)/def2-QZVPP level (Iyer et al., 2016).</p>
</sec>
<sec id="Ch1.S2.SS5">
  <label>2.5</label><title>SAPHIR-CHANEL campaign</title>
      <p id="d2e1262">During the summer of 2024, a series of VOC oxidation experiments were conducted in the SAPHIR-CHANEL campaign at Forschungszentrum Jülich, Germany, which aims to mimic the atmospheric evolution of VOCs from a wide range of sources under different conditions. The SAPHIR chamber is a large outdoor chamber and has been well described in the previous literature (Fuchs et al., 2013).</p>
      <p id="d2e1265">In the SAPHIR-CHANEL experiments, different VOC mixes were used as analogues of important compounds emitted from different sources in inhabited areas, including volatile chemical products (VCPs), cooking, gasoline, diesel, and biogenic VOCs. Both single-source and mixed-source oxidation experiments were conducted during the campaign. To maximize the atmospheric relevance in the mixed-source experiments, the VOC categories were combined in the same ratio as those measured in Los Angeles (Coggon et al., 2021; Pfannerstill et al., 2024; Stockwell et al., 2025). Gaseous compounds were sampled from the SAPHIR chamber to the MR-CIMS through a Teflon tube with an outer diameter of 0.5 inches, an inner diameter of 0.36 in., and a length of 0.68 m, with a flow rate of ca. 1.8 L min<sup>−1</sup>. The tube extended 0.38 m outside the chamber and 0.30 m inside. Detailed experiment descriptions, including other instruments and the chemical regimes, will be provided in a separate manuscript in preparation.</p>
      <p id="d2e1280">In the chamber experiment results, only the sigmoid fits of signal decays during voltage scanning with a coefficient of determination (<inline-formula><mml:math id="M86" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>) greater than 0.5 were retained. A total of 36 voltage scans were conducted at different experiment stages during the multi-source chamber experiments in the campaign in order to cover the widest range of compounds and the median dV<sub>50</sub> for each adduct was selected to represent its binding energy. Kernel density estimation (KDE) was applied to estimate the probability density functions of dV<sub>50</sub> in both channels, in order to provide better visualization of the effects of oxygen levels on dV<sub>50</sub> (Silverman, 2018). KDE was performed using the kdeplot function from the Seaborn package (version 0.13.2) in Python (Waskom, 2021). We utilized the Gaussian kernel and applied a factor of 0.7 to the bandwidth estimated from Scott's Rule to show more details of distributions (Scott, 1979). The detailed calculation methods are provided in Sect. S1.</p>
      <p id="d2e1321">Since voltage scanning essentially determines cluster stability through cluster dissociation, which significantly reduces the signals of the analytes, it is only suitable for analytes with a sufficient signal-to-noise ratio (SNR) in the mass spectrum. The relationship between SNR and the applicability of voltage scanning was studied here. We followed the calculation principle of noise in previous research (Yan et al., 2016), and the detailed calculation methods of SNR were provided in Sect. S2.</p>
</sec>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Results and discussion</title>
<sec id="Ch1.S3.SS1">
  <label>3.1</label><title>Determination of collision limit</title>
      <p id="d2e1340">The collision limit sensitivities of analytes in bromide and iodide adduct channels are difficult to determine, because the required standards are either unavailable, expensive or exhibit significant wall losses during calibration. Aggarwal et al. (2025) determined the collision limit of a total of 39 CIMS and statistically demonstrated that the collision-limited sensitivity relative to the reagent ion remains nearly unchanged across different ionization mechanisms, if the reactor geometry and other key parameters, including reactor temperature, pressure, and water content remain constant (Aggarwal et al., 2025). It should be noted that although different reagent ions share the same collision limit under identical IMR conditions, the exact value must still be experimentally determined for each individual instrument. This is because factors after the IMR, e.g., ion optics transmission efficiency and detector settings, can vary across instruments. We adopted their approach to determine the collision limits of the bromide and iodide channels by measuring that of the benzene channel, as <inline-formula><mml:math id="M90" display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula>-pinene, which is readily available, was shown to be ionized at the collision-limit sensitivity by benzene cations in the previous study (Aggarwal et al., 2025). In our instrument, the sensitivity of <inline-formula><mml:math id="M91" display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula>-pinene was calibrated with a standard VOC cylinder and was determined to be 13.87 <inline-formula><mml:math id="M92" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.69 ncps pptv<sup>−1</sup>. This value was used as the upper limit with an uncertainty of 5 % in fitting the relationship between dV<sub>50</sub> and sensitivity. Aggarwal et al. (2025) have already demonstrated statistically that the collision-limit sensitivities of the benzene, bromide and iodide channels are very similar (Aggarwal et al., 2025). In addition, we further examine the binding enthalpy and sensitivities of the calibrants in the bromide channel, thereby confirming the validity of this choice.</p>
</sec>
<sec id="Ch1.S3.SS2">
  <label>3.2</label><title>Relationship between sensitivity and dV<sub>50</sub></title>
      <p id="d2e1402">Measured during the liquid calibration in the laboratory, the variation of some typical ion–molecule adducts' signals in the bromide channel during the voltage scanning are shown in Fig. S5. Most observed signals corresponding to ion–molecule adducts showed a sigmoidal decrease with an increasing voltage gap. A similar trend was observed in the iodide channel and will not be elaborated here to avoid redundancy. The water-reagent ion clusters are known to be among the weakest adducts in I-CIMS and Br-CIMS (Iyer et al., 2016). Our results support this observation, and their dV<sub>50</sub> may serve as practical lower limits.</p>

      <fig id="F2" specific-use="star"><label>Figure 2</label><caption><p id="d2e1416">Relationships between dV<sub>50</sub> of adducts and sensitivities to the corresponding species in the <bold>(a)</bold> bromide channel and <bold>(b)</bold> iodide channel of MR-CIMS. Fitting curves and 95 % confidence intervals of dV<sub>50</sub> and sensitivity are shown. For comparison, the sigmoidal fit line from the iodide channel is also plotted in panel <bold>(a)</bold> and that from the bromide channel is also plotted in panel <bold>(b)</bold>. The systematic uncertainty derived from voltage scanning is the sum of squares of 5 % uncertainty from collision limit determination and half the confidence interval of sigmoid fit divided by the corresponding fitted value.</p></caption>
          <graphic xlink:href="https://amt.copernicus.org/articles/19/4583/2026/amt-19-4583-2026-f02.png"/>

        </fig>

      <p id="d2e1456">A series of gaseous compounds were calibrated in MR-CIMS and their measured sensitivities show a clear correlation with dV<sub>50</sub> (Fig. 2), Generally, iodide shows a higher selectivity than bromide in chemical ionization. The maximum sensitivity experimentally determined from the benzene cation channel is close to the maximum sensitivity determined from the bromide channel, which supports the use of a single value for the collision limit between different channels as recommended by Aggarwal et al. (2025). This offers a promising approach for the calibration of the collision limit, with the potential to significantly reduce time and cost. We did not find suitable calibrants that have collision-limit sensitivity in the iodide channel and can be generated at ignorable loss by our LCS. Therefore, we used the maximum sensitivity in other channels when fitting the empirical relationship for the iodide channel. The uncertainty in the estimation was defined as half the width of the 95 % confidence interval of the sigmoid fit, divided by the corresponding fitted value, and was also treated as a systematic error associated with the use of this method. The uncertainty was considerable for compounds with low dV<sub>50</sub>, but generally remained below 20 % for those with dV<sub>50</sub> greater than 8.60 and 8.52 V in the bromide and iodide channel, respectively, corresponding to sensitivities of 5.69 and 5.30 ncps pptv<sup>−1</sup>.</p>
      <p id="d2e1499">Glyoxylic acid (C<sub>2</sub>H<sub>2</sub>O<sub>3</sub>, SMILES: C(<inline-formula><mml:math id="M106" display="inline"><mml:mo lspace="0mm">=</mml:mo></mml:math></inline-formula>O)C(<inline-formula><mml:math id="M107" display="inline"><mml:mo lspace="0mm">=</mml:mo></mml:math></inline-formula>O)O) and glycolic acid (C<sub>2</sub>H<sub>4</sub>O<sub>3</sub>, SMILES: OC(<inline-formula><mml:math id="M111" display="inline"><mml:mo lspace="0mm">=</mml:mo></mml:math></inline-formula>O)CO) exhibit higher sensitivity than acetic acid (C<sub>2</sub>H<sub>4</sub>O<sub>2</sub>, SMILES: CC(<inline-formula><mml:math id="M115" display="inline"><mml:mo lspace="0mm">=</mml:mo></mml:math></inline-formula>O)O) in both channels. The effect of the benzene ring on sensitivity differs between the two channels, which is evident from the sensitivity of salicylic acid (C<sub>7</sub>H<sub>6</sub>O<sub>3</sub>, SMILES: O<inline-formula><mml:math id="M119" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula>C(O)c1ccccc1O). It effectively reduces the sensitivity in the iodide channel while having minimal impact in the bromide channel.</p>
      <p id="d2e1647">The carbon chain structure also needs to be considered when estimating the sensitivity of the compound. Glyoxylic acid has a much higher sensitivity than pyruvic acid (C<sub>3</sub>H<sub>4</sub>O<sub>3</sub>, SMILES: CC(<inline-formula><mml:math id="M123" display="inline"><mml:mo lspace="0mm">=</mml:mo></mml:math></inline-formula>O)C(<inline-formula><mml:math id="M124" display="inline"><mml:mo lspace="0mm">=</mml:mo></mml:math></inline-formula>O)O) in both channels, and formic acid (CH<sub>2</sub>O<sub>2</sub>, SMILES: C(<inline-formula><mml:math id="M127" display="inline"><mml:mo lspace="0mm">=</mml:mo></mml:math></inline-formula>O)O) is also much more sensitive than acetic acid. However, such a reduction in sensitivity with the increasing carbon chain is not obvious for other compounds. Acetic acid has a very close sensitivity to butyric acid (C<sub>4</sub>H<sub>8</sub>O<sub>2</sub>, SMILES: CCCC(<inline-formula><mml:math id="M131" display="inline"><mml:mo lspace="0mm">=</mml:mo></mml:math></inline-formula>O)O), whilst ethylene glycol (C<sub>2</sub>H<sub>6</sub>O<sub>2</sub>, SMILES: OCCO) is as sensitive as propylene glycol (C<sub>3</sub>H<sub>8</sub>O<sub>2</sub>, SMILES: CC(O)CO) in both channels, though higher uncertainty is an issue in the calibration of these low sensitivity compounds. Therefore, the influence of the carbon chain cannot be linearly correlated with its size and requires further clarification through theoretical calculations.</p>
      <p id="d2e1807">Additionally, we also calibrated the three isomers of nitrophenol (2-nitrophenol, 3-nitrophenol, and 4-nitrophenol), to investigate the difference in sensitivity caused by the structures of analytes. 3-nitrophenol and 4-nitrophenol have high and similar sensitivity, which are confirmed by their dV<sub>50</sub> results. No meaningful signal corresponding to 2-nitrophenol associated with the bromide or iodide ion was detected. However, a charged anion (C<sub>6</sub>H<sub>4</sub>NO<inline-formula><mml:math id="M141" display="inline"><mml:mrow><mml:msubsup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>) with a modest signal was observed, likely resulting from proton abstraction from 2-nitrophenol.</p>
      <p id="d2e1849">A test experiment was conducted to confirm that fast-switching settings of MR-CIMS do not influence the determination of dV<sub>50</sub> for the analytes. We measured the dV<sub>50</sub> of lactic acid under routine operation and under conditions where the VUV lamps were operated without switching. The results of both negative channels are shown in Fig. S6, demonstrating that the differences were within 3 %.</p>
      <p id="d2e1870">This voltage scanning method incorporating a voltage bias is also applicable to other instruments utilizing Vocus AIM IMR. We employed it on our Vocus chemical ionization time-of-flight mass spectrometer (Vocus CI-TOF, Vocus 2R, Tofwerk AG.). We followed the default operating pressure of Vocus CI-TOF, with its IMR and SQ maintained at 60 and 2.0 mbar, respectively. We set the voltage bias at its electrode “Vocus/Reactor back” and adjusted the potential before BSQ with its electrodes “RF DC” and “Skimmer” by the same increment. The results obtained are comparable to those from MR-CIMS, though the absolute sensitivities of same compounds differed between the two instruments (Fig. S7). This is likely due to factors such as instrument tuning, microchannel plate (MCP) settings, and pressures. In addition, because we did not have an extra dopant flow heater, the water ratio of the Vocus CI-TOF in iodide channel and bromide channel were 0.09 and 0.3, respectively. However, the relationship between dV<sub>50</sub> and sensitivities was preserved.</p>
</sec>
<sec id="Ch1.S3.SS3">
  <label>3.3</label><title>Theoretical calculations</title>
      <p id="d2e1890">Quantum chemistry calculations were performed to better understand the dependence of sensitivity on structure, especially that of Br-CIMS. The calculated formation enthalpies were listed in Table 1. The sensitivity to lactic acid (C<sub>3</sub>H<sub>6</sub>O<sub>3</sub>, SMILES: CC(C(<inline-formula><mml:math id="M148" display="inline"><mml:mo lspace="0mm">=</mml:mo></mml:math></inline-formula>O)O)O) was not determined due to its high background in the calibration system, but its dV<sub>50</sub> was obtained. Ethanol (C<sub>2</sub>H<sub>6</sub>O, SMILES: CCO) was not detectable by either the iodide channel and bromide channel, and its formation enthalpy with Br<sup>−</sup> was calculated here for comparison.</p>

<table-wrap id="T1" specific-use="star"><label>Table 1</label><caption><p id="d2e1967">Cluster formation enthalpies and experimentally determined dV<sub>50</sub> of different species with bromide or iodide. The cluster geometries were optimized at the <inline-formula><mml:math id="M154" display="inline"><mml:mi mathvariant="italic">ω</mml:mi></mml:math></inline-formula>B97X-D3/def2-TZVPPD level at 298.15 K. The enthalpies were calculated at the DLPNO-CCSD(T)/def2-QZVPPD level at 298.15 K. The error of dV<sub>50</sub> represents the standard error of the sigmoid fit.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Cluster formation pathway</oasis:entry>
         <oasis:entry colname="col2">Cluster formation</oasis:entry>
         <oasis:entry colname="col3">Molecule dV<sub>50</sub> in</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">enthalpies</oasis:entry>
         <oasis:entry colname="col3">the corresponding</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">(kcal mol<sup>−1</sup>)</oasis:entry>
         <oasis:entry colname="col3">channel (V)</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">HNO<sub>3</sub> <inline-formula><mml:math id="M159" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> Br<sup>−</sup> <inline-formula><mml:math id="M161" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> HNO<sub>3</sub>Br<sup>−</sup></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M164" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>25.69</oasis:entry>
         <oasis:entry colname="col3">10.80 <inline-formula><mml:math id="M165" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.11</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">CH<sub>2</sub>O<sub>2</sub> <inline-formula><mml:math id="M168" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> Br<sup>−</sup> <inline-formula><mml:math id="M170" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> CH<sub>2</sub>O<sub>2</sub>Br<sup>−</sup></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M174" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>28.30</oasis:entry>
         <oasis:entry colname="col3">9.05 <inline-formula><mml:math id="M175" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.07</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">C<sub>2</sub>H<sub>4</sub>O<sub>2</sub> <inline-formula><mml:math id="M179" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> Br<sup>−</sup> <inline-formula><mml:math id="M181" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> C<sub>2</sub>H<sub>4</sub>O<sub>2</sub>Br<sup>−</sup></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M186" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>15.15</oasis:entry>
         <oasis:entry colname="col3">7.13 <inline-formula><mml:math id="M187" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.06</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">C<sub>2</sub>H<sub>2</sub>O<sub>3</sub> <inline-formula><mml:math id="M191" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> Br<sup>−</sup> <inline-formula><mml:math id="M193" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> C<sub>2</sub>H<sub>2</sub>O<sub>3</sub>Br<sup>−</sup></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M198" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>25.39</oasis:entry>
         <oasis:entry colname="col3">8.99 <inline-formula><mml:math id="M199" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.06</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">C<sub>2</sub>H<sub>4</sub>O<sub>3</sub> <inline-formula><mml:math id="M203" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> Br<sup>−</sup> <inline-formula><mml:math id="M205" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> C<sub>2</sub>H<sub>4</sub>O<sub>3</sub>Br<sup>−</sup></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M210" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>31.89</oasis:entry>
         <oasis:entry colname="col3">9.43 <inline-formula><mml:math id="M211" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.05</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">C<sub>2</sub>H<sub>6</sub>O<sub>2</sub> <inline-formula><mml:math id="M215" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> Br<sup>−</sup> <inline-formula><mml:math id="M217" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> C<sub>2</sub>H<sub>6</sub>O<sub>2</sub>Br<sup>−</sup></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M222" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>20.34</oasis:entry>
         <oasis:entry colname="col3">7.09 <inline-formula><mml:math id="M223" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.08</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">C<sub>3</sub>H<sub>6</sub>O<sub>3</sub> <inline-formula><mml:math id="M227" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> Br<sup>−</sup> <inline-formula><mml:math id="M229" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> C<sub>3</sub>H<sub>6</sub>O<sub>3</sub>Br<sup>−</sup></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M234" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>27.45</oasis:entry>
         <oasis:entry colname="col3">8.51 <inline-formula><mml:math id="M235" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.12</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">C<sub>3</sub>H<sub>4</sub>O<sub>3</sub> <inline-formula><mml:math id="M239" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> Br<sup>−</sup> <inline-formula><mml:math id="M241" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> C<sub>3</sub>H<sub>4</sub>O<sub>3</sub>Br<sup>−</sup></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M246" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>25.13</oasis:entry>
         <oasis:entry colname="col3">7.67 <inline-formula><mml:math id="M247" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.06</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">C<sub>4</sub>H<sub>8</sub>O<sub>2</sub> <inline-formula><mml:math id="M251" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> Br<sup>−</sup> <inline-formula><mml:math id="M253" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> C<sub>4</sub>H<sub>8</sub>O<sub>2</sub>Br<sup>−</sup></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M258" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>21.18</oasis:entry>
         <oasis:entry colname="col3">6.86 <inline-formula><mml:math id="M259" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.04</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">C<sub>6</sub>H<sub>5</sub>NO<sub>3</sub> <inline-formula><mml:math id="M263" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> Br<sup>−</sup> <inline-formula><mml:math id="M265" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> C<sub>6</sub>H<sub>5</sub>NO<sub>3</sub>Br<sup>−</sup> (4-nitrophenol)</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M270" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>32.10</oasis:entry>
         <oasis:entry colname="col3">12.03 <inline-formula><mml:math id="M271" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.09</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">C<sub>2</sub>H<sub>6</sub>O <inline-formula><mml:math id="M274" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> Br<sup>−</sup> <inline-formula><mml:math id="M276" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> C<sub>2</sub>H<sub>6</sub>OBr<sup>−</sup></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M280" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>15.24</oasis:entry>
         <oasis:entry colname="col3">not detected</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">C<sub>2</sub>H<sub>4</sub>O<sub>2</sub> <inline-formula><mml:math id="M284" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> I<sup>−</sup> <inline-formula><mml:math id="M286" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> C<sub>2</sub>H<sub>4</sub>O<sub>2</sub>I<sup>−</sup></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M291" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>14.37</oasis:entry>
         <oasis:entry colname="col3">6.63 <inline-formula><mml:math id="M292" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.06</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">C<sub>2</sub>H<sub>4</sub>O<sub>3</sub> <inline-formula><mml:math id="M296" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> I<sup>−</sup> <inline-formula><mml:math id="M298" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> C<sub>2</sub>H<sub>4</sub>O<sub>3</sub>I<sup>−</sup></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M303" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>26.94</oasis:entry>
         <oasis:entry colname="col3">8.25 <inline-formula><mml:math id="M304" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.08</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">C<sub>2</sub>H<sub>2</sub>O<sub>3</sub> <inline-formula><mml:math id="M308" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> I<sup>−</sup> <inline-formula><mml:math id="M310" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> C<sub>2</sub>H<sub>2</sub>O<sub>3</sub>I<sup>−</sup></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M315" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>20.80</oasis:entry>
         <oasis:entry colname="col3">7.86 <inline-formula><mml:math id="M316" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.07</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">C<sub>2</sub>H<sub>6</sub>O<sub>2</sub> <inline-formula><mml:math id="M320" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> I<sup>−</sup> <inline-formula><mml:math id="M322" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> C<sub>2</sub>H<sub>6</sub>O<sub>2</sub>I<sup>−</sup></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M327" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>18.44</oasis:entry>
         <oasis:entry colname="col3">5.75 <inline-formula><mml:math id="M328" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.17</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d2e3656">The theoretical formation enthalpies for Br<sup>−</sup> showed good linear relationship (<inline-formula><mml:math id="M330" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M331" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.744) with experimentally determined binding energies (Fig. 3), except for 4-nitrophenol and HNO<sub>3</sub>. 4-nitrophenol exhibited a high dV<sub>50</sub> and a sensitivity close to that of <inline-formula><mml:math id="M334" display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula>-pinene in benzene channel, which is consistent with its large cluster formation enthalpy. Previous investigations showed that iodine can be clustered by bromide at collision-limit sensitivity (Wang et al., 2021), with a calculated cluster formation enthalpy to be <inline-formula><mml:math id="M335" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>32.15 kcal mol<sup>−1</sup> at our calculation level. The cluster formation enthalpy of 4-nitrophenol and bromide was calculated to be <inline-formula><mml:math id="M337" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>32.10 kcal mol<sup>−1</sup>, which was nearly identical to that of iodine.</p>

      <fig id="F3"><label>Figure 3</label><caption><p id="d2e3753">Comparison between the cluster formation enthalpy calculated at the DLPNO-CCSD(T)/def2-QZVPPD level at 298.15 K and experimentally determined dV<sub>50</sub>. The error of dV<sub>50</sub> represents the standard error of the sigmoid fit. Nitric acid was an obvious outlier due to the stabilization effects of water clusters. 4-nitrophenol was clustered at the collision limit, causing its dV<sub>50</sub> to deviate substantially from the fitted trend of the other data points.</p></caption>
          <graphic xlink:href="https://amt.copernicus.org/articles/19/4583/2026/amt-19-4583-2026-f03.png"/>

        </fig>

      <p id="d2e3789">Although the sensitivity to HNO<sub>3</sub> in Br-CIMS approaches the collision limit, the calculated cluster formation enthalpy of BrHNO<inline-formula><mml:math id="M343" display="inline"><mml:mrow><mml:msubsup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> was only around <inline-formula><mml:math id="M344" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>25.69 kcal mol<sup>−1</sup>. This discrepancy can be explained by its interactions with water molecules in the IMR. The cluster formation enthalpy for BrH<sub>2</sub>O<inline-formula><mml:math id="M347" display="inline"><mml:mrow class="chem"><mml:mi class="Radical" mathvariant="normal">⚫</mml:mi></mml:mrow></mml:math></inline-formula>HNO<inline-formula><mml:math id="M348" display="inline"><mml:mrow><mml:msubsup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> was calculated to be <inline-formula><mml:math id="M349" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>24.26 kcal mol<sup>−1</sup>, only slightly lower than those of the corresponding BrHNO<inline-formula><mml:math id="M351" display="inline"><mml:mrow><mml:msubsup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> clusters. However, the addition of water molecule can effectively increase number of vibrational modes of small molecules and result in the vibrational relaxation of excess energy, which can stabilize the BrH<sub>2</sub>O<inline-formula><mml:math id="M353" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal" class="Radical">⚫</mml:mi></mml:mrow></mml:math></inline-formula>HNO<inline-formula><mml:math id="M354" display="inline"><mml:mrow><mml:msubsup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>. Such energy accommodation can efficiently compensate for the slight reduction in cluster formation enthalpy and enhance the sensitivity to HNO<sub>3</sub>. This is evidenced by the rapid increase in their sensitivity and the concomitant decrease in its fragmentation with increasing RH (Fig. S8). This mechanism was previously reported for compounds with no more than 8 atoms in the IMR of I-CIMS (Lee et al., 2014), and was investigated through quantum Rice-Ramsperger-Kassel (QRRK) calculations by Iyer et al. (2016). It is likewise applicable here, since both instruments employ adduct formation as the basis for ionization, albeit with different reagent ions. Despite BrH<sub>2</sub>O<inline-formula><mml:math id="M357" display="inline"><mml:mrow class="chem"><mml:mi class="Radical" mathvariant="normal">⚫</mml:mi></mml:mrow></mml:math></inline-formula>HNO<inline-formula><mml:math id="M358" display="inline"><mml:mrow><mml:msubsup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> being the dominant form of cluster formed from HNO<sub>3</sub> in the IMR, the mass spectrum was characterized by BrHNO<inline-formula><mml:math id="M360" display="inline"><mml:mrow><mml:msubsup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> as the major peak. This can be explained by the low fragmentation enthalpies: BrH<sub>2</sub>O<inline-formula><mml:math id="M362" display="inline"><mml:mrow class="chem"><mml:mi class="Radical" mathvariant="normal">⚫</mml:mi></mml:mrow></mml:math></inline-formula>HNO<inline-formula><mml:math id="M363" display="inline"><mml:mrow><mml:msubsup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> dissociating to BrHNO<inline-formula><mml:math id="M364" display="inline"><mml:mrow><mml:msubsup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> and H<sub>2</sub>O (10.26 kcal mol<sup>−1</sup>). Therefore, the weak binding between H<sub>2</sub>O and Br<sup>−</sup> can be easily dissociated during the transmission through the quadrupoles and ion lens.</p>
      <p id="d2e4064">Meanwhile, the stabilization effect from water clustering might also influence small organic compounds in the bromide channel. As QRRK simulations exceed our computational resources, we restrict our analysis to a qualitative comparison. The cluster formation enthalpy of C<sub>2</sub>H<sub>4</sub>O<inline-formula><mml:math id="M371" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mrow class="chem"><mml:mi class="Radical" mathvariant="normal">⚫</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>Br<sup>−</sup> (<inline-formula><mml:math id="M373" display="inline"><mml:mo lspace="0mm">-</mml:mo></mml:math></inline-formula>15.15 kcal mol<sup>−1</sup>) is comparable to that of C<sub>2</sub>H<sub>6</sub>O<inline-formula><mml:math id="M377" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal" class="Radical">⚫</mml:mi></mml:mrow></mml:math></inline-formula>Br<sup>−</sup> (<inline-formula><mml:math id="M379" display="inline"><mml:mo lspace="0mm">-</mml:mo></mml:math></inline-formula>15.24 kcal mol<sup>−1</sup>), however only C<sub>2</sub>H<sub>4</sub>O<inline-formula><mml:math id="M383" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mrow class="chem"><mml:mi class="Radical" mathvariant="normal">⚫</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>Br<sup>−</sup> produced a detectable signal of in the MS and its dV<sub>50</sub> was even larger than C<sub>2</sub>H<sub>6</sub>O<inline-formula><mml:math id="M388" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mrow class="chem"><mml:mi class="Radical" mathvariant="normal">⚫</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>Br<sup>−</sup>, whose formation enthalpy was <inline-formula><mml:math id="M390" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>20.34 kcal mol<sup>−1</sup>. This suggested that the water cluster stabilization effect was effective for acetic acid (8 atoms) but limited for ethanol (9 atoms) and ethylene glycol (10 atoms). Despite its cluster formation enthalpy with Br<sup>−</sup> being 4.35 kcal mol<sup>−1</sup> more negative than that with BrH<sub>2</sub>O<sup>−</sup>, the probability of forming BrH<sub>2</sub>O<sup>−</sup> clusters substantially increased owing to the humidified sample conditions. These stabilization effects were inherently reflected in the experimentally determined dV<sub>50</sub>, which implied the effective binding energy under real ionization conditions. This was supported by the observed sigmoid relationship between dV<sub>50</sub> and sensitivities.</p>
      <p id="d2e4368">Computational results indicated that all of the detectable organic molecules are bound to Br<sup>−</sup> via hydrogen bonding, forming stable adducts, similar to the conditions modelled in I-CIMS (Iyer et al., 2016). The optimized geometries of representative clusters, including CH<sub>2</sub>O<inline-formula><mml:math id="M402" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mrow class="chem"><mml:mi class="Radical" mathvariant="normal">⚫</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>Br<sup>−</sup>, C<sub>2</sub>H<sub>4</sub>O<inline-formula><mml:math id="M406" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mrow class="chem"><mml:mi class="Radical" mathvariant="normal">⚫</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>Br<sup>−</sup>, C<sub>2</sub>H<sub>6</sub>O<inline-formula><mml:math id="M410" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mrow class="chem"><mml:mi mathvariant="normal" class="Radical">⚫</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>Br<sup>−</sup>, C<sub>2</sub>H<sub>4</sub>O<inline-formula><mml:math id="M414" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mrow class="chem"><mml:mi class="Radical" mathvariant="normal">⚫</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>Br<sup>−</sup>, C<sub>3</sub>H<sub>6</sub>O<inline-formula><mml:math id="M418" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mrow class="chem"><mml:mi mathvariant="normal" class="Radical">⚫</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>Br<sup>−</sup>, and C<sub>2</sub>H<sub>2</sub>O<inline-formula><mml:math id="M422" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mrow class="chem"><mml:mi class="Radical" mathvariant="normal">⚫</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>Br<sup>−</sup>, are shown in Fig. 4.</p>

      <fig id="F4"><label>Figure 4</label><caption><p id="d2e4617">Geometries of clusters between Br<sup>−</sup> and <bold>(a)</bold> formic acid, <bold>(b)</bold> acetic acid, <bold>(c)</bold> ethylene glycol, <bold>(d)</bold> glycolic acid, <bold>(e)</bold> lactic acid, and <bold>(f)</bold> glyoxylic acid. Color coding: oxygen, red; carbon, gray; hydrogen, white; bromine, brown. Hydrogen bond lengths were labeled in the plot.</p></caption>
          <graphic xlink:href="https://amt.copernicus.org/articles/19/4583/2026/amt-19-4583-2026-f04.png"/>

        </fig>

      <p id="d2e4655">Carboxyl groups (Fig. 4a, b) and hydroxyl groups (Fig. 4c) can both form a hydrogen bond with Br<sup>−</sup>. In addition, adjacent hydroxyl and carboxyl groups can jointly form hydrogen bonds with Br<sup>−</sup>, as observed in glycolic acid (Fig. 4d) and lactic acid (Fig. 4e). Neither carbonyl group nor aldehyde group can form hydrogen bonding with halogen anions because they are all hydrogen bond acceptors. Consequently, ketone and aldehydes cannot be effectively detected in Br-CIMS. However, the sensitivity of glyoxylic acid is much higher than acetic acid. It is because the aldehyde group as a whole is an electron-withdrawing functional group, which can increase the acidity of the adjacent carboxyl group and enhances the partial positive (<inline-formula><mml:math id="M427" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>) character of the carboxylic proton. This promotes hydrogen bonding formation between the carboxylic proton and Br<sup>−</sup>. This is corroborated by the more negative cluster formation enthalpy of <inline-formula><mml:math id="M429" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>25.39 kcal mol<sup>−1</sup> of C<sub>2</sub>H<sub>2</sub>O<inline-formula><mml:math id="M433" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mrow class="chem"><mml:mi mathvariant="normal" class="Radical">⚫</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>Br<sup>−</sup> cluster (Fig. 4f) compared to that of C<sub>2</sub>H<sub>4</sub>O<inline-formula><mml:math id="M437" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mrow class="chem"><mml:mi class="Radical" mathvariant="normal">⚫</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>Br<sup>−</sup> (<inline-formula><mml:math id="M439" display="inline"><mml:mo lspace="0mm">-</mml:mo></mml:math></inline-formula>15.15 kcal mol<sup>−1</sup>).</p>
      <p id="d2e4816">A comparable effect was also observed for alkyl substitution attached to the carboxyl group. The sensitivity of formic acid is larger than that of acetic acid, as the electron-donating methyl group in acetic acid decreases the <inline-formula><mml:math id="M441" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> character of the carboxylic proton. Therefore, the cluster formation enthalpy of CH<sub>2</sub>O<inline-formula><mml:math id="M443" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mrow class="chem"><mml:mi mathvariant="normal" class="Radical">⚫</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>Br<sup>−</sup> (<inline-formula><mml:math id="M445" display="inline"><mml:mo lspace="0mm">-</mml:mo></mml:math></inline-formula>28.30 kcal mol<sup>−1</sup>) is more negative than that of C<sub>2</sub>H<sub>4</sub>O<inline-formula><mml:math id="M449" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mrow class="chem"><mml:mi mathvariant="normal" class="Radical">⚫</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>Br<sup>−</sup>, which agrees well with the experimental results.</p>
      <p id="d2e4921">The binding mechanism also accounted for the inability of bromide channel to detect 2-nitrophenol. It possessed a well-known intramolecular hydrogen bond (Borisenko et al., 1994), which effectively inhibited the hydroxyl group from forming a strong hydrogen bond with Br<sup>−</sup>. In contrast, such intramolecular hydrogen bonding was absent in 3- and 4-nitrophenol (Boll et al., 1958), enabling these isomers to be detected with substantially higher sensitivity. This explanation was also applicable for I-CIMS due to their subtly different but similar binding methods.</p>
      <p id="d2e4933">The calculated geometries and the order of the formation enthalpies in the iodide channel are generally consistent with those reported by Iyer et al(2016). The only difference is that glycolic acid was previously assumed to be charged by iodide through hydrogen bonding with its hydroxyl group (Iyer et al., 2016). However, our calculations suggest that the hydrogen bond involving the carboxyl group is energetically more stable (Fig. S9), similar to other acids. This difference arises from the higher level of theory employed in our calculations. We also calculated the structure in which glycolic acid forms two hydrogen bonds with iodide, which had a cluster formation enthalpy of <inline-formula><mml:math id="M452" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>26.16 kcal mol<sup>−1</sup>, but it is less stable than the structure where iodide is bonded to the carboxyl group (<inline-formula><mml:math id="M454" display="inline"><mml:mo lspace="0mm">-</mml:mo></mml:math></inline-formula>26.94 kcal mol<sup>−1</sup>). Such a difference in the adduct formation mechanisms of <inline-formula><mml:math id="M456" display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula>-hydroxy acid in the bromide and iodide channel might be attributed to the greater steric effect of iodide than the bromide.</p>
</sec>
<sec id="Ch1.S3.SS4">
  <label>3.4</label><title>Applications in chamber experiments</title>
      <p id="d2e4989">The voltage scanning conducted during the SAPHIR-CHANEL campaign facilitated the quantification of a range of gaseous species. As mentioned above, only sigmoid fits of adduct signal decay with a <inline-formula><mml:math id="M457" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> larger than 0.5 were considered as successful voltage scanning results. Certain signals exhibited insufficient intensity to reveal a distinct sigmoid decay, whereas others showed no decay during voltage scanning and were likely to be fragment ions. We will also investigate the abundance of signal intensities required to be applicable for voltage scanning later.</p>
      <p id="d2e5003">The distribution density of dV<sub>50</sub> for nitrogen-free organic compounds is shown in Fig. 5, which illustrates that estimating sensitivity for CIMS based solely on molecular formula would lead to significant errors without additional voltage scanning information. For clarity, only compounds with at least 2 oxygen atoms (C<sub><italic>x</italic></sub>H<sub><italic>y</italic></sub>O<sub><italic>z</italic></sub>, <inline-formula><mml:math id="M462" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M463" display="inline"><mml:mo>≥</mml:mo></mml:math></inline-formula> 2) are presented. In the bromide channel, an increase of up to four oxygen atoms generally resulted in a rise of approximately 1 V in dV<sub>50</sub> per additional oxygen atom for C<sub><italic>x</italic></sub>H<sub><italic>y</italic></sub>O<sub>2–4</sub>. However, estimating the dV<sub>50</sub> of a particular molecule solely based on the number of oxygen atoms resulted in significant errors. The trend of increasing dV<sub>50</sub> with oxygen atoms was only observed for C<sub><italic>x</italic></sub>H<sub><italic>y</italic></sub>O<sub>2–4</sub> in the iodide channel, but some C<sub><italic>x</italic></sub>H<sub><italic>y</italic></sub>O<sub>2</sub> showed up with the highest dV<sub>50</sub>. For nitrogen-free compounds with at least 5 oxygen atoms, the distributions of dV<sub>50</sub> were broader in both channels. This might be attributed to the increase in both the number and types of oxygen-containing functional groups, leading to greater structural diversity. The distributions of dV<sub>50</sub> for organonitrates were more complex. No obvious relationship with effective oxygen atoms and dV<sub>50</sub> was observed in both channels (Fig. S10), which highlighted the complicated effect of the nitrate group on the sensitivity of compounds.</p>

      <fig id="F5"><label>Figure 5</label><caption><p id="d2e5215">Probability density distributions of dV<sub>50</sub> for compounds C<sub><italic>x</italic></sub>H<sub><italic>y</italic></sub>O<sub><italic>z</italic></sub> (<inline-formula><mml:math id="M484" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M485" display="inline"><mml:mo>≥</mml:mo></mml:math></inline-formula> 2) detected in the <bold>(a)</bold> bromide channel and <bold>(b)</bold> iodide channel of MR-CIMS. dV<sub>50</sub> of water and nitric acid in each channel are shown for comparison. The number of compounds in each category are shown in the label.</p></caption>
          <graphic xlink:href="https://amt.copernicus.org/articles/19/4583/2026/amt-19-4583-2026-f05.png"/>

        </fig>

      <p id="d2e5291">In the SAPHIR chamber experiments, the dV<sub>50</sub> of a total of 290 and 264 organic compounds were determined in the bromide and iodide channels respectively and thus their sensitivities can be derived. Box and whisker plots of the distributions of 1-second integration SNRs for compounds characterized with successful voltage scanning results from these experiments in Fig. S11. The 5th and 25th percentile of the SNRs are 1.9 and 4.0 in the bromide channel, and 1.6 and 3.7 in the iodide channels, respectively. The signals that yielded successful voltage scanning were evaluated relative to the widely used limit-of-detection threshold of SNR <inline-formula><mml:math id="M488" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 3 (Yuan et al., 2017), in order to understand the signal strength necessary for a successful scanning. 84.7 % of compounds with successful voltage scanning results in the bromide channel and 82.3 % in the iodide channel exhibited SNRs large than 3. Therefore, an SNR of 3 was assumed as the thresholds for the abundance of adduct signals applicable to voltage scanning, if their dissociations were observed during the increasing of electric field strength.</p>

      <fig id="F6" specific-use="star"><label>Figure 6</label><caption><p id="d2e5313"><bold>(a)</bold> Comparison between HONO concentrations measured by the bromide channel of MR-CIMS against ICAD during the SAPHIR-CHANEL campaign averaged at a time resolution of 10 min. The points are colored by their measured time. Fitted using an orthogonal distance regression (ODR). <bold>(b)</bold> An example comparison of measurements in a background experiment at a time resolution of 2 min. The shaded region indicates the measurement uncertainty. The measurement uncertainty of ICAD was estimated to be 10 %. The measurement uncertainty of MR-CIMS for HONO was estimated to be the RSS of systematic uncertainty and random uncertainty.</p></caption>
          <graphic xlink:href="https://amt.copernicus.org/articles/19/4583/2026/amt-19-4583-2026-f06.png"/>

        </fig>

      <p id="d2e5327">The reliability of this method is demonstrated by comparing signals of independently calibrated techniques to those of MR-CIMS using voltage scanning. The HONO concentrations measured by the bromide channel of MR-CIMS and a directly calibrated ICAD (iterative cavity enhanced differential optical absorption spectroscopy) were compared in the chamber experiments during which the voltage scanning approach was applied, shown in Fig. 6a. We estimated HONO sensitivity in the bromide channel to be around 6.53 <inline-formula><mml:math id="M489" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 1.10 ncps pptv<sup>−1</sup> based on its dV<sub>50</sub>, and modified it based on the weekly VOCs calibration results on the benzene channel. The concentrations measured by the two instruments were very similar, as indicated by an orthogonal distance regression (ODR) slope of 1.24 and an <inline-formula><mml:math id="M492" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> of 0.891. Periods of chamber flushing or pre-humidification were excluded from fitting. The measurement uncertainty of ICAD was estimated to be 10 % at 1 min averaging interval (1<inline-formula><mml:math id="M493" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>). The total uncertainty of MR-CIMS on the estimated concentration was calculated with the root square sum (RSS) of systematic uncertainty and random uncertainty, which was around 16.8 %. Systematic uncertainty was derived from the sensitivity estimation based on voltage scanning as illustrated above, while random uncertainty was the noise at 1 min averaging interval (1<inline-formula><mml:math id="M494" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>) calculated following the method in Sect. S3. A background experiment, conducted without any precursor injection, was used to illustrate the measurement results from the two instruments (Fig. 6b). The discrepancies generally fell within the propagated uncertainties.</p>

      <fig id="F7" specific-use="star"><label>Figure 7</label><caption><p id="d2e5386">Measured by bromide channel, time series of ISOPOOH (C<sub>5</sub>H<sub>10</sub>O<sub>3</sub>), pinonic acid (C<sub>10</sub>H<sub>16</sub>O<sub>3</sub>), butene-derived organonitrates (C<sub>4</sub>H<sub>7</sub>NO<sub>4</sub> and C<sub>4</sub>H<sub>9</sub>NO<sub>4</sub>), xylene-derived organonitrate (C<sub>8</sub>H<sub>11</sub>NO<sub>6</sub>), and dodecane-derived organonitrate (C<sub>12</sub>H<sub>23</sub>NO<sub>4</sub>) in a multi-source chamber experiment during SAPHIR-CHANEL campaign. The Gray shadow region indicates the periods of precursor injection. Uncertainties were calculated by the RSS of systematic uncertainty and random uncertainty and indicated by the shaded regions around the time series.</p></caption>
          <graphic xlink:href="https://amt.copernicus.org/articles/19/4583/2026/amt-19-4583-2026-f07.png"/>

        </fig>

      <p id="d2e5560">Other compounds were also quantified with acceptable total uncertainties. To illustrate the utility of voltage scanning approach, we present data measured by bromide channel and calibrated by the voltage scanning approach from a multi-source chamber experiment designed to simulate daytime oxidation in the Los Angeles atmosphere (Fig. 7). Several precursors were injected, including gasoline, biogenic, cooking, and VCP sources. During the oxidation experiments, a series of compounds that have been previously identified to be formed from certain precursors were detected. These compounds include first-generation intermediate closed-shell products of isoprene oxidation, isoprene hydroxy hydroperoxides (ISOPOOH, C<sub>5</sub>H<sub>10</sub>O<sub>3</sub>) (Wennberg et al., 2018), pinonic acid (C<sub>10</sub>H<sub>16</sub>O<sub>3</sub>) generated from pinene oxidation (Lopez-Hilfiker et al., 2016), two organonitrates generated from the oxidation of butene (C<sub>4</sub>H<sub>7</sub>NO<sub>4</sub> and C<sub>4</sub>H<sub>9</sub>NO<sub>4</sub>) (Travis et al., 2023), an NO termination product of xylene-derived bicyclic peroxy radical (C<sub>8</sub>H<sub>11</sub>NO<sub>6</sub>) (Bianchi et al., 2019), and an organonitrate generated from dodecane oxidation (C<sub>12</sub>H<sub>23</sub>NO<sub>4</sub>). All of these oxidation products have clearly identifiable precursors as indicated by the master chemical mechanism (MCM) (Jenkin et al., 2003; Saunders et al., 2003). These precursor-product relationships were also confirmed by the mass spectrometry detected in the corresponding single-source chamber experiments.</p>
      <p id="d2e5729">The compounds mentioned above were detected at varying concentrations, ranging from just a few pptv to as high as 170 pptv. The systematic uncertainties for C<sub>5</sub>H<sub>10</sub>O<sub>3</sub>, C<sub>10</sub>H<sub>16</sub>O<sub>3</sub>, C<sub>4</sub>H<sub>7</sub>NO<sub>4</sub>, C<sub>4</sub>H<sub>9</sub>NO<sub>4</sub>, C<sub>8</sub>H<sub>11</sub>NO<sub>6</sub>, and C<sub>12</sub>H<sub>23</sub>NO<sub>4</sub> were 13.7 %, 9.3 %, 31.3 %, 20.4 %, 7.9 %, and 13.7 %, respectively. Their random uncertainties varied with signal intensity, with lower values observed at higher SNR. When the chamber roof was open, their 5th to 95th percentile total uncertainties were 13.7 %–13.9 %, 9.4 %–10.4 %, 31.7 %–35.4 %, 20.5 %–21.7 %, 8.9 %–19.9 %, and 16.1 %–39.0 %, respectively. Therefore, they all had acceptable total uncertainties during the daytime oxidation, though characterized by different sensitivities and concentrations.</p>
      <p id="d2e5897">It deserves notification that the voltage scanning signal might represent a sum of individual responses of structural isomers. If multiple isomers contribute significantly to the ion signal and have different binding energies, the resulting voltage scanning profile cannot be well represented by a single sigmoid fitting. This limitation motivates the use of a sigmoid fitting quality threshold, i.e., <inline-formula><mml:math id="M549" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M550" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 0.5, below which signals are not retained. In addition, the voltage scanning method can provide insight into compound functionality. As discussed above, different oxygenated functional groups have distinct binding energies, which can be captured in their corresponding dV<sub>50</sub> values derived from voltage scanning.</p>
</sec>
<sec id="Ch1.S3.SS5">
  <label>3.5</label><title>Halogen compounds</title>
      <p id="d2e5936">Chlorine was clearly detected in both negative channels, but we only observed the dissociation of the Cl<inline-formula><mml:math id="M552" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mrow class="chem"><mml:mi mathvariant="normal" class="Radical">⚫</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>Br<sup>−</sup> cluster when performing voltage scanning. This indicates that the binding energy of Cl<inline-formula><mml:math id="M554" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mrow class="chem"><mml:mi class="Radical" mathvariant="normal">⚫</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>Br<sup>−</sup> and Cl<inline-formula><mml:math id="M556" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mrow class="chem"><mml:mi class="Radical" mathvariant="normal">⚫</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>I<sup>−</sup> cluster should be quite high. However, this is in contrast with the fact that the sensitivity of Cl<sub>2</sub> in the bromide channel and iodide channel were only around 11.33 <inline-formula><mml:math id="M559" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.37 and 3.27 <inline-formula><mml:math id="M560" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.40 ncps pptv<sup>−1</sup>, respectively, lower than the collision limit. Cl<sub>2</sub>, as a small molecule, also benefited from the stabilization effect of water molecules, as evidenced by the concurrent increase in sensitivity and decrease in fragmentation with rising RH (Fig. S12). The cluster formation and fragmentation enthalpy related to Cl<sub>2</sub> and I<sub>2</sub> with reagent ions and hydrated reagent ions were included in Table 2. It can be shown that the fragmentation enthalpy of the intramolecular bond is close to, or in the iodide channel even lower than, that of the halogen bond formed between halogen compounds and the reagent ions. Therefore, during the voltage scanning, after the dissociation of the halogen–hydrated reagent ion cluster, the dissociation of intramolecular and intermolecular bond was thermodynamically competitive. As a result, the determined dV<sub>50</sub> of halogen compounds were likely to be inaccurate because multiple dissociation processes occurred simultaneously. In conclusion, the voltage-scanning method may fail to give meaningful results when the ion–molecule interaction is dominated by a halogen bond. The fragmentation peak Cl<sup>−</sup> was not included in the discussion of sensitivity here, as both the voltage scanning and quantum chemistry were intended to determine the intermolecular binding energy of the cluster formed between the reagent ions and analytes, i.e., Cl<inline-formula><mml:math id="M567" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mrow class="chem"><mml:mi mathvariant="normal" class="Radical">⚫</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>Br<sup>−</sup> and Cl<inline-formula><mml:math id="M569" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mrow class="chem"><mml:mi mathvariant="normal" class="Radical">⚫</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>I<sup>−</sup>.</p>

<table-wrap id="T2"><label>Table 2</label><caption><p id="d2e6135">Fragmentation reaction enthalpies of different species with bromide ions. The cluster geometries are optimized at the <inline-formula><mml:math id="M571" display="inline"><mml:mi mathvariant="italic">ω</mml:mi></mml:math></inline-formula>B97X-D3/def2-TZVPPD level at 298.15 K. The enthalpies are calculated at the DLPNO-CCSD(T)/def2-QZVPPD level at 298.15 K.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="2">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Cluster fragmentation</oasis:entry>
         <oasis:entry colname="col2">Fragmentation enthalpies</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">pathway</oasis:entry>
         <oasis:entry colname="col2">(kcal mol<sup>−1</sup>)</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Cl<sub>2</sub>Br<sup>−</sup> <inline-formula><mml:math id="M575" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> BrCl <inline-formula><mml:math id="M576" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> Cl<sup>−</sup></oasis:entry>
         <oasis:entry colname="col2">21.75</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Cl<sub>2</sub>Br<sup>−</sup> <inline-formula><mml:math id="M580" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> Cl<sub>2</sub> <inline-formula><mml:math id="M582" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> Br<sup>−</sup></oasis:entry>
         <oasis:entry colname="col2">21.55</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">I<sub>2</sub>Br<sup>−</sup> <inline-formula><mml:math id="M586" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> IBr <inline-formula><mml:math id="M587" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> I<sup>−</sup></oasis:entry>
         <oasis:entry colname="col2">33.77</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">I<sub>2</sub>Br<sup>−</sup> <inline-formula><mml:math id="M591" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> I<sub>2</sub> <inline-formula><mml:math id="M593" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> Br<sup>−</sup></oasis:entry>
         <oasis:entry colname="col2">32.15</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Cl<sub>2</sub>I<sup>−</sup> <inline-formula><mml:math id="M597" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> ICl <inline-formula><mml:math id="M598" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> Cl<sup>−</sup></oasis:entry>
         <oasis:entry colname="col2">16.69</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Cl<sub>2</sub>I<sup>−</sup> <inline-formula><mml:math id="M602" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> Cl<sub>2</sub> <inline-formula><mml:math id="M604" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> I<sup>−</sup></oasis:entry>
         <oasis:entry colname="col2">21.99</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</sec>
</sec>
<sec id="Ch1.S4" sec-type="conclusions">
  <label>4</label><title>Conclusions</title>
      <p id="d2e6524">In this study, a voltage scanning method was conducted on a multi-reagent ion CIMS instrument (MR-CIMS) to estimate the relative binding energies of ion–molecule adducts in the instrument's bromide and iodide channels. The sigmoid relationship between voltage bias at which the signal reduced by half (dV<sub>50</sub>) and relative sensitivities in both channels were characterized. These results, together with absolute collision-limit sensitivities obtained via a recently published methodology based on the equivalence of different ionization schemes under identical CIMS operating conditions (Aggarwal et al., 2025), demonstrate that CIMS is capable of quantifying gas-phase mixing ratios for a broad spectrum of atmospheric molecules. A comprehensive understanding of the functionality and structure dependence of bromide-adduct formation chemical ionization was obtained with experimentally determined dV<sub>50</sub> and theoretically calculated binding enthalpies. For small molecules, water molecules might effectively accommodate the excess energy of their ion–molecule clusters and enhance their sensitivities, which can also be manifested in their unexpectedly larger dV<sub>50</sub>.</p>
      <p id="d2e6554">The dV<sub>50</sub> of a series of compounds were determined during a series of experiments conducted at the SAPHIR chamber and the comparison of HONO concentrations validated the reliability of this method. A total of 290 and 264 compounds can be quantified in the bromide channel and iodide channel in the chamber experiments, respectively. The enhancement in sensitivity brought about by oxygenated functionalities was observed, but the specific molecular structures also had a significant influence on sensitivity, which confirmed the calibration results conducted previously. A SNR threshold of 3.0 was suggested to be applied as a threshold for the adduct signal abundance for voltage scanning, provided that dissociation was observed with increasing electric field strength. Measurement uncertainties were discussed for typical compounds generated from different precursors in a daytime oxidation chamber experiment. The comparable intra- and intermolecular bond energies of halogen compounds inherently limit their applicability of this quantification method. This work demonstrates that voltage scanning holds significant potential for the quantification of gaseous compounds and presents substantial opportunities for further development and application.</p>
</sec>

      
      </body>
    <back><notes notes-type="dataavailability"><title>Data availability</title>

      <p id="d2e6571">Data are available from the authors upon request.</p>
  </notes><app-group>
        <supplementary-material position="anchor"><p id="d2e6574">The supplement related to this article is available online at <inline-supplementary-material xlink:href="https://doi.org/10.5194/amt-19-4583-2026-supplement" xlink:title="pdf">https://doi.org/10.5194/amt-19-4583-2026-supplement</inline-supplementary-material>.</p></supplementary-material>
        </app-group><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d2e6583">YW, HC, and TB designed and conducted the calibration experiments. YW and FL worked on the method development. YW, HC, and TB wrote the manuscript. The manuscript was written through contributions of all authors. All authors have given approval to the final version of the manuscript.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d2e6589">The contact author has declared that none of the authors has any competing interests.</p>
  </notes><notes notes-type="disclaimer"><title>Disclaimer</title>

      <p id="d2e6595">Publisher's note: Copernicus Publications remains neutral with regard to jurisdictional claims made in the text, published maps, institutional affiliations, or any other geographical representation in this paper. The authors bear the ultimate responsibility for providing appropriate place names. Views expressed in the text are those of the authors and do not necessarily reflect the views of the publisher.</p>
  </notes><ack><title>Acknowledgements</title><p id="d2e6601">YW is supported through NERC grant ConstrAining the RolE of Sulfur in the earth system (CARES), Award number, NE/W009307/1. AV acknowledges funding support from the Natural Environment Research Council (NERC) through the UK National Centre for Atmospheric Science (NCAS). This work was supported by the European Research Council (ERC) under the European Union's Horizon Europe research and innovation program through the Starting Grant CHANEL (grant no. 101076276), which provided the primary funding for the CHANEL campaign. Additional support for SAPHIR chamber operations was provided by the EC ATMO-ACCESS Transnational Access program (grant agreement No 101008004). This project has received funding from the European Research Council under the European Union's Horizon 2020 research and innovation programme under the Consolidator Grant ADAPT (grant No. 101002728). We gratefully acknowledge the entire SAPHIR team at Forschungszentrum Jülich for their technical support and operation of the chamber during the CHANEL campaign. Finally, editorial and coding assistance using artificial intelligence was employed to refine text phrasing and streamline figure generation. The authors retain full responsibility for the scientific content and interpretation of all results. We would like to acknowledge Chelsea Stockwell, Carsten Warneke, Steve Brown and Matthew M. Coggon from National Oceanic and Atmospheric Administration with the preparation and organization of the campaign. We would like to acknowledge Charel Wohl and David Oram from University of East Anglia for the use of the liquid calibration system.</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d2e6606">This research has been supported by the Natural Environment Research Council (grant no. NE/W009307/1), the European Research Council, HORIZON EUROPE European Research Council (Starting Grant CHANEL (grant no. 101076276) and Consolidator Grant ADAPT (grant no. 101002728)), and the Integrated Carbon Observation System (ATMO-ACCESS Transnational Access program, grant no. 101008004).</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d2e6612">This paper was edited by Bin Yuan and reviewed by two anonymous referees.</p>
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