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  <front>
    <journal-meta>
<journal-id journal-id-type="publisher">AMT</journal-id>
<journal-title-group>
<journal-title>Atmospheric Measurement Techniques</journal-title>
<abbrev-journal-title abbrev-type="publisher">AMT</abbrev-journal-title>
<abbrev-journal-title abbrev-type="nlm-ta">Atmos. Meas. Tech.</abbrev-journal-title>
</journal-title-group>
<issn pub-type="epub">1867-8548</issn>
<publisher><publisher-name>Copernicus Publications</publisher-name>
<publisher-loc>Göttingen, Germany</publisher-loc>
</publisher>
</journal-meta>

    <article-meta>
      <article-id pub-id-type="doi">10.5194/amt-9-3577-2016</article-id><title-group><article-title>How to reliably detect molecular clusters and nucleation mode particles with
Neutral cluster and Air Ion Spectrometer (NAIS)</article-title>
      </title-group><?xmltex \runningtitle{How to reliably detect molecular clusters and nucleation mode particles with NAIS}?><?xmltex \runningauthor{H.~E.~Manninen et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Manninen</surname><given-names>Hanna E.</given-names></name>
          <email>hanna.manninen@helsinki.fi</email>
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2 aff3">
          <name><surname>Mirme</surname><given-names>Sander</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2 aff3">
          <name><surname>Mirme</surname><given-names>Aadu</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Petäjä</surname><given-names>Tuukka</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-1881-9044</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Kulmala</surname><given-names>Markku</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-3464-7825</ext-link></contrib>
        <aff id="aff1"><label>1</label><institution>Department of Physical Sciences, P.O. Box 64, 00014 University of
Helsinki, Finland</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Institute of Physics, Laboratory of Environmental Physics, University
of Tartu, Ülikooli 18, 50090 Tartu, Estonia</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Airel, Ltd., Observatooriumi 5, 61602 Tõravere, Estonia</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Hanna E. Manninen (hanna.manninen@helsinki.fi)</corresp></author-notes><pub-date><day>3</day><month>August</month><year>2016</year></pub-date>
      
      <volume>9</volume>
      <issue>8</issue>
      <fpage>3577</fpage><lpage>3605</lpage>
      <history>
        <date date-type="received"><day>26</day><month>January</month><year>2016</year></date>
           <date date-type="rev-request"><day>6</day><month>April</month><year>2016</year></date>
           <date date-type="rev-recd"><day>13</day><month>June</month><year>2016</year></date>
           <date date-type="accepted"><day>24</day><month>June</month><year>2016</year></date>
      </history>
      <permissions>
<license license-type="open-access">
<license-p>This work is licensed under a Creative Commons Attribution 3.0 Unported License. To view a copy of this license, visit <ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by/3.0/">http://creativecommons.org/licenses/by/3.0/</ext-link></license-p>
</license>
</permissions><self-uri xlink:href="https://amt.copernicus.org/articles/9/3577/2016/amt-9-3577-2016.html">This article is available from https://amt.copernicus.org/articles/9/3577/2016/amt-9-3577-2016.html</self-uri>
<self-uri xlink:href="https://amt.copernicus.org/articles/9/3577/2016/amt-9-3577-2016.pdf">The full text article is available as a PDF file from https://amt.copernicus.org/articles/9/3577/2016/amt-9-3577-2016.pdf</self-uri>


      <abstract>
    <p>To understand the very first steps of atmospheric
particle formation and growth processes, information on the size where the
atmospheric nucleation and cluster activation occurs, is crucially needed.
The current understanding of the concentrations and dynamics of charged and
neutral clusters and particles is based on theoretical predictions and
experimental observations. This paper gives a standard operation procedure
(SOP) for Neutral cluster and Air Ion Spectrometer (NAIS) measurements and
data processing. With the NAIS data, we have improved the scientific
understanding by (1) direct detection of freshly formed atmospheric clusters
and particles, (2) linking experimental observations and theoretical
framework to understand the formation and growth mechanisms of aerosol
particles, and (3) parameterizing formation and growth mechanisms for
atmospheric models. The SOP provides tools to harmonize the world-wide
measurements of small clusters and nucleation mode particles and to verify
consistent results measured by the NAIS users. The work is based on
discussions and interactions between the NAIS users and the NAIS
manufacturer.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <title>Introduction</title>
      <p>Understanding of the detailed formation mechanisms and the chemical
composition of vapours, which participate in the atmospheric particle
formation processes, has clearly benefited from direct atmospheric
measurements and improvements in measurement techniques (Manninen et al.,
2010; Kulmala et al., 2013, 2014; Ehn et al., 2014). Aerosol particles have
global effects on Earth's climate and regional effects on air quality. In
atmospheric particle formation, we study the phase transition from gas phase
precursors to aerosol particles. Atmospheric new particle formation can
start via molecular clustering, and it is followed by cluster activation for
enhanced growth (Kulmala et al., 2013). The freshly formed particles grow by
multicomponent condensation. When aerosol particles grow further to sizes
where they can act as cloud condensation nuclei, they start to have effect
on the climate. One of the main objective of atmospheric aerosol science is
to contribute to the reduction of scientific uncertainties concerning global
climate change issues, particularly those related to aerosol–cloud
interactions (IPCC, 2013).</p>
      <p>Although the Neutral cluster and Air Ion Spectrometer (NAIS, Mirme and
Mirme, 2013) is a relatively recently developed instrument, it has already
been used widely in many atmospheric particle formation studies. First field
observations by Kulmala et al. (2007) showed the capacity of the instrument
for direct detection of the newly formed particles, and later the long-term
observations in field lead into fundamental understanding of the cluster
formation and activation (Manninen et al., 2009). The NAIS has been used in
various environments in all continents to study both natural and
anthropogenic aerosols, both during short-term campaigns and during
long-term field studies. For example, the NAIS has been deployed in the
boundary layer (e.g. Manninen et al., 2010), in the middle troposphere
(Laakso et al., 2007; Boulon et al., 2011; Rose et al., 2015), in the
upper free troposphere (Mirme et al., 2010), and in the tropics (Suni et al.,
2008; Martin et al., 2010; Siingh et al., 2013), at the middle and
high latitudes (Lihavainen et al., 2007; Manninen et al., 2010) and in the
polar regions (Virkkula et al., 2007), and in the remote, rural, and urban
areas (Tiitta et al., 2007; Backman et al., 2012; Hirsikko et al., 2007,
2013; Herrmann et al., 2014; Jayaratne et al., 2014). Several laboratory
studies have been conducted to investigate connection between the small
cluster ions and new particle formation (e.g. Ortega et al., 2012; Franchin
et al., 2015; Duplissy et al., 2016; Kirkby et al., 2016).</p>
<sec id="Ch1.S1.SS1">
  <title>Special considerations when measuring cluster and nucleation mode
particles with the NAIS</title>
      <p>The instrument measures the number size
distribution of atmospheric ions and particles by collecting signal
simultaneously with many electrometers. The complete distribution of both
polarities is determined rapidly using parallel columns. This is the main
advantage of the NAIS, but it also creates convoluted instrument
construction, and complex maintenance and calibration procedures.</p>
      <p>The sampling and detection of small ions and freshly formed particles is
demanding. Firstly, the charging probability of neutral nanometer-sized
particles is very low and the concentration of growing freshly formed
particles is often less than 10 particles per cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. Thus, efficient
charging and large sample-flow rates are essential for increasing the amount of
collected particles. Secondly, the clusters and small particles can undergo
rapid transformations and their composition can change during sampling
before the actual detection. Thus, the residence time of the air within the
instrument should be short and the temperature, humidity and trace gas
composition of the sheath air should be similar to ambient. Thirdly,
reducing diffusional and electrical inlet losses of charged clusters and
nanoparticles is a crucial requirement for the measurement set-up. Thus, the
inlet lines should be as short as possible, and the inlet must be grounded,
and there should be no un-grounded conductive or dielectric material near
the inlet. Finally, the calibration and verification of the NAIS under
laboratory conditions is essential to confirm that the field results are
reproducible and comparable to avoid misinterpretation of data and
incorrectly calculated nucleation parameters.</p>
      <p>In this paper we present a method to measure number size distribution of
clusters at sub-3 nm and nanoparticles at sub-25 nm (i.e. nucleation mode
particles; see Kulmala et al., 2012). This standard operation procedure
(SOP) is based on scientific and technical discussions between the NAIS and
the Air Ion Spectrometer (AIS) users among the ACTRIS (Aerosols, Clouds, and
Trace gases Research InfraStructure network) partners as well as with the
(N)AIS manufacturer Airel Ltd., Estonia. The procedure work is led by the
University of Helsinki. The aim is to provide consistent results and unified
datasets measured with the NAIS around the world, as the NAIS results
improve our understanding of the processes producing atmospheric
nanoparticles. These results can be used for developing aerosol process
parameterization for the atmospheric models, and validating and constraining
the global models. Note that the procedures presented here apply to
instrumentation which are currently in use. As the NAIS instrument is under
continuous development, the maintenance, calibration and data processing
methods need to be updated and modified accordingly.</p>
</sec>
<sec id="Ch1.S1.SS2">
  <title>Procedure overview</title>
      <p>The SOP (Sect. 3) is written for the NAIS users
with different background. The procedure has three main parts that explain
the required actions:<def-list>
            <def-item><term>Section 3.1–3.2</term><def>

      <p>detail how to calibrate and verify the instrument
both in laboratory and in the field. This is essential during long-term
operation, and prior and after short-term campaigns to confirm that the
results are reliable.</p>
            </def></def-item>
            <def-item><term>Section 3.3–3.5</term><def>

      <p>detail how to install, operate and maintain the
instrument during the field, laboratory or chamber measurements. Various
environmental conditions are considered.</p>
            </def></def-item>
            <def-item><term>Section 3.6–3.7</term><def>

      <p>detail how to process the collected data including
the data corrections and data quality checks. This step is typically
required before the new particle formation data analysis, which is described
in detail in Kulmala et al. (2012).</p>
            </def></def-item>
          </def-list></p>
      <p>Critical topics are highlighted. Section 4 provides a troubleshooting section
for the most typical issues during the NAIS operation. In Sect. 5, some
typical ion and particle number size distributions measured with the NAIS
are presented.</p>
</sec>
</sec>
<sec id="Ch1.S2">
  <title>Instrumentation</title>
<sec id="Ch1.S2.SS1">
  <title>Neutral cluster and Air Ion Spectrometer</title>
      <p>The NAIS is a multichannel aerosol mobility spectrometer capable of
measuring a mobility distribution of charged particles and ions of both
polarities in an electrical mobility range from 3.2 to 0.0013 cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> V<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>,
and a size distribution of total particles in a
size range from 2.0 to 42 nm. A controlled charging of the aerosol sample
with a needle-corona charger followed by an electrical filtering of the
corona-generated ions, is used to measure the total aerosol particles.
Manninen (2011) and Mirme and Mirme (2013) describe the principles of NAIS
design and raw signal processing in more details.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><caption><p> </p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/3577/2016/amt-9-3577-2016-f01-part01.png"/>

        </fig>

<?xmltex \hack{\addtocounter{figure}{-1}}?><?xmltex \floatpos{t}?><fig id="Ch1.F2" specific-use="star"><caption><p>A schematic of the NAIS with: <bold>(a)</bold> 1-blower, <bold>(b)</bold> 3-blower, and
<bold>(c)</bold> 4-blower flow system.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/3577/2016/amt-9-3577-2016-f01-part02.png"/>

        </fig>

</sec>
<sec id="Ch1.S2.SS2">
  <title>Instrument schematics and flow chart</title>
      <p>Figure 1 illustrates that the
NAIS can have a “1-blower”, “3-blower” or “4-blower flow system”. Whereas in the
1-blower system all flows are controlled by one blower, in the 3-blower
system there is one sample flow blower for the instrument. In the 4-blower
version both columns have a separate sample flow blower. All the flow rates
– sheath flow for both polarities and sample flow (either single or
separate) – are measured using Venturi tubes and differential pressure
sensors. The blowers are automatically controlled to maintain the correct
flow rates. The flow sensors are calibrated at Airel Ltd., Estonia.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1"><caption><p>Recommended measurement modes and measurement cycle of the NAIS.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="5">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left" colsep="1"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:colspec colnum="5" colname="col5" align="left"/>
     <oasis:thead>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry namest="col2" nameend="col3" align="center">Ion  </oasis:entry>  
         <oasis:entry namest="col4" nameend="col5" align="center">Particle  </oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry rowsep="1" namest="col2" nameend="col3" align="center">measurements </oasis:entry>  
         <oasis:entry rowsep="1" namest="col4" nameend="col5" align="center">measurements </oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Pos.</oasis:entry>  
         <oasis:entry colname="col3">Neg.</oasis:entry>  
         <oasis:entry colname="col4">Pos.</oasis:entry>  
         <oasis:entry colname="col5">Neg.</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">ions</oasis:entry>  
         <oasis:entry colname="col3">ions</oasis:entry>  
         <oasis:entry colname="col4">charging</oasis:entry>  
         <oasis:entry colname="col5">charging</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">DMA polarity</oasis:entry>  
         <oasis:entry colname="col2">positive</oasis:entry>  
         <oasis:entry colname="col3">negative</oasis:entry>  
         <oasis:entry colname="col4">positive</oasis:entry>  
         <oasis:entry colname="col5">negative</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Discharger</oasis:entry>  
         <oasis:entry colname="col2">off</oasis:entry>  
         <oasis:entry colname="col3">off</oasis:entry>  
         <oasis:entry colname="col4">off</oasis:entry>  
         <oasis:entry colname="col5">off</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Filter</oasis:entry>  
         <oasis:entry colname="col2">off</oasis:entry>  
         <oasis:entry colname="col3">off</oasis:entry>  
         <oasis:entry colname="col4">off</oasis:entry>  
         <oasis:entry colname="col5">off</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Charger</oasis:entry>  
         <oasis:entry colname="col2">off</oasis:entry>  
         <oasis:entry colname="col3">off</oasis:entry>  
         <oasis:entry colname="col4">on,</oasis:entry>  
         <oasis:entry colname="col5">on,</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4">pos. HV</oasis:entry>  
         <oasis:entry colname="col5">neg. HV</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Post-filter</oasis:entry>  
         <oasis:entry colname="col2">off</oasis:entry>  
         <oasis:entry colname="col3">off</oasis:entry>  
         <oasis:entry colname="col4">on</oasis:entry>  
         <oasis:entry colname="col5">on</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Duration (s)</oasis:entry>  
         <oasis:entry namest="col2" nameend="col3" align="center">90 (45) </oasis:entry>  
         <oasis:entry namest="col4" nameend="col5" align="center">90 (45) </oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup>

  <oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:thead>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry rowsep="1" namest="col2" nameend="col3" align="center">Offset measurements </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Pos. polarity</oasis:entry>  
         <oasis:entry colname="col3">Neg. polarity</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">DMA polarity</oasis:entry>  
         <oasis:entry colname="col2">positive</oasis:entry>  
         <oasis:entry colname="col3">negative</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Discharger</oasis:entry>  
         <oasis:entry colname="col2">on, neg. HV</oasis:entry>  
         <oasis:entry colname="col3">on, pos. HV</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Filter</oasis:entry>  
         <oasis:entry colname="col2">on</oasis:entry>  
         <oasis:entry colname="col3">on</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Charger</oasis:entry>  
         <oasis:entry colname="col2">off</oasis:entry>  
         <oasis:entry colname="col3">off</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Post-filter</oasis:entry>  
         <oasis:entry colname="col2">off</oasis:entry>  
         <oasis:entry colname="col3">off</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Duration (s)</oasis:entry>  
         <oasis:entry namest="col2" nameend="col3" align="center">30 (30) </oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</sec>
<sec id="Ch1.S2.SS3">
  <title>Measurement modes</title>
      <p>The mobility analyzers of the NAIS are preceded
by a software controlled sample preconditioning unit. Depending on the
measurement mode of the instrument, the unit may filter particles out to
measure a zero signal, charge the particles to measure neutral aerosol, or
leave the sample untouched to measure naturally charged ions.<?xmltex \hack{\newpage}?></p>
      <p>The four main measurement modes of the instrument are as follows:
(1) <italic>Ions mode</italic> is used to measure naturally charged particles and ions. All parts of the
preconditioning unit are switched off and the aerosol sample is not
modified. (2) <italic>Particles mode</italic> is used to measure all particles including the uncharged
fraction. The main charger and “post-filter” are switched on. (3) <italic>Alternating charging mode</italic> is similar to
the particle mode but additionally the discharger is switched on. This has
the effect of “neutralizing” the sample and so it improves the instrument
performance in the case of a non-steady-state charge distribution. (4) <italic>Offset mode</italic> is used
to measure the zero signal and noise levels of the electrometers. The
particles are first charged by the discharger with ions of a opposite
polarity to that, which is measured by the analyser and then filtered out.
This way no detectable particles will enter the analyser.</p>
</sec>
<sec id="Ch1.S2.SS4">
  <title>Recommended measurement cycle</title>
      <p>The recommended measurement cycle for the NAIS ground-based
measurements is alternating between offset, ions, and particle modes as
follows: offset – 30; ions – 90; particles – 90; where the numbers represent
measurement times in different modes in seconds. Reliable offset
measurements are vital for the accuracy of the instrument itself and for the final number size distribution. The offset signal is
estimated using a linear regression on the electric current measurements
from the previous and following offset measurement cycles. The variance of
the electric current signal during the offset cycle is used to estimate the
noise level of individual electrometers. It is recommended that the duration
of the offset measurement is between 30 and 60 s, and the total length
of the measurement cycle is between 2 and 5 min (Table 1).</p>
</sec>
<sec id="Ch1.S2.SS5">
  <title>Sample preconditioning unit with corona chargers and electrical
filters</title>
      <p>This is presented in Fig. 2. Although bipolar radioactive chargers are
the most widely used chargers due to their well-defined charge distribution
(Wiedensohler, 1988; Reischl et al., 1997), unipolar diffusion chargers can
attain much higher charging efficiency levels (Intra and Tippayawong, 2009).
Thus, the NAIS uses the unipolar corona discharge ionization. The high
voltage (HV) supplies feed the corona charger needles (typically with 2–3 kV).
The voltages are controlled by a feedback system to maintain a constant
electric current of the corona ions to the outer electrode of the charger
volume.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3" specific-use="star"><caption><p>A cross section of the aerosol preconditioning unit and upper part
of the mobility analyzer for old generation (left column) and new generation
(right column) of the NAIS. Grounding of the different parts are visualized.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/3577/2016/amt-9-3577-2016-f02.png"/>

        </fig>

      <p>Both measurement columns use two corona chargers. The first charger is
called the discharger and it can charge particles in the opposite polarity
to the one, which is measured by the subsequent mobility analyser. The
discharger currents are <inline-formula><mml:math display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn>20</mml:mn></mml:mrow></mml:math></inline-formula> nA for the positive column and 20 nA for the
negative one during the offset operating mode. In the alternating charging
mode the currents are <inline-formula><mml:math display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn>10</mml:mn></mml:mrow></mml:math></inline-formula> and 10 nA, respectively. The discharger is
followed by an electric filter, which is used during the offset operating
mode to remove the charger ions and charged particles. Although these
particles would not be directly detected by the analyser due to their wrong
polarity, the space charge would still induce unwanted electric currents to
the measurement electrodes. The set point voltage of the filter is 500 V,
when switched on.</p>
      <p>The main charger current is set to 25 nA for the positive charger and to
<inline-formula><mml:math display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn>22</mml:mn></mml:mrow></mml:math></inline-formula> nA for the negative one. The difference in charging currents
compensates for the difference in the charging efficiency of the chargers
(due to the different mean mobility of positive and negative ions, Manninen
et al., 2011).</p>
</sec>
<sec id="Ch1.S2.SS6">
  <title>Notice when using the particles mode</title>
      <p>The corona charger ions have
a mobility diameter range of 1.0–1.6 nm (1.3–0.8 cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> V<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>,
Manninen et al., 2011). These sizes define the absolute lower detection
limit of the NAIS in the particle mode. The size range of corona
charger-generated ions measured by the NAIS is illustrated in Fig. 3 with a
gray shaded area. The figure shows that the charger ions were clearly
smaller than 2 nm. The post-filter is used to cut-off the corona ions
generated by the charger, and consequently the small charged particles are
filtered out together with ions used for the charging. The post-filter
voltage is typically 30–150 V. If the corona ions were allowed to pass into
the analyzer they would saturate the first measurement channels and cause
invalid signals in the later channels. As can be seen from Fig. 4, the
electrical filtering of the charger ions and the inability to remove all the
naturally charged particles plays an important role in determining the
lowest detection limit to approximately 2 nm in electrical mobility
equivalent size. For more details see Sect. 3.7.4.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4"><caption><p>The size distributions of four different sizes of neutral silver
particles measured with the NAIS (positive charging, automatic
post-filtering). The shaded area represents the size range of corona charger
ions.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/3577/2016/amt-9-3577-2016-f03.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5"><caption><p>The size distribution of 4.5 nm neutral silver particles measured
with the NAIS using <bold>(a)</bold> positive and <bold>(b)</bold> negative corona charging, and <bold>(c)</bold> the
size distribution of 2.8 nm particles measured with positive charging.
Different lines represent different post-filter voltages.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/3577/2016/amt-9-3577-2016-f04.png"/>

        </fig>

</sec>
</sec>
<sec id="Ch1.S3">
  <title>Procedure</title>
      <p>We encourage all NAIS users to follow this procedure, which is based on
earlier scientific work by Mirme et al. (2007, 2010), Asmi et al. (2009),
Manninen et al. (2009, 2011), Kulmala et al. (2012), Mirme and Mirme (2013),
and Wagner et al. (2016). The procedure has been motivated by a need of
reliable long-term field measurements and by the comparability of such
long-term field data. We aim to improve the comparability of the results by
improving the instrument's verification, maintenance, and data processing
procedures.</p>
<sec id="Ch1.S3.SS1">
  <title>Instrument calibration</title>
      <p>Prior to the measurements, the NAIS flow sensors and the electrometer
background levels should be checked. The NAIS software monitors the flows
using Venturi flow metres during the measurements continuously. The NAIS
flows should be compared to a reference flow metre. If a discrepancy is
detected, the flow sensors need to be recalibrated to update the calibration
coefficients in the measurement software. The electrometer background can be
checked by passing particle-free air into the instrument or by performing a
concentration calibration as a function of particle size. The voltages in
the inner electrode of the differential mobility analyser (DMA) should be
measured before and after ambient measurements. The background and DMA
voltages are continuously recorded by software during the measurements.</p>
      <p>It is recommended that ion spectrometer users take part in the calibration
and intercomparison workshops organized in co-operation by University of
Helsinki and Airel Ltd. The ion spectrometers should be calibrated often
enough, preferably at the calibration workshops. The goal is to organize
these workshops on a regular basis. During the workshops the ion
spectrometer flows are calibrated and their mobility classification and
concentration measurements are verified.</p>
<sec id="Ch1.S3.SS1.SSS1">
  <title>CRITICAL: determining the flows of the NAIS</title>
      <p>The sheath and input flows of the NAIS are critical for a precise
determination of the particle mobility and concentration. Thus, prior to the
mobility and concentration calibrations the instrument should be cleaned,
leak tested and flow checked. The cleaning procedures are essential before
the determination of flows. If dirt enters the tubing or nets
inside the instrument, the flow resistance will alter the volume flow
through the Venturi tubes (see Sect. 3.5.2). When maintenance cleaning is
done regularly, the instruments can perform well for extended periods and
flows stay stable (Gagné et al., 2011). This is primarily relevant for the
instruments with the 1-blower flow system as the correct flow balance is
very delicate (see Option A). The newer instruments with three and four blowers
will maintain flow stability for much longer periods without the maintenance
and will only require recalibration in case a simple check indicates a
problem (see Option B).</p>
</sec>
<sec id="Ch1.S3.SS1.SSSx1" specific-use="unnumbered">
  <title>Leak tests</title>
      <p>Leak tests can be done using several methods. <italic>Alternative 1:</italic> the volume flow rate
measured from the inlet and outlet should match when no leaks exist. This is
sufficient in case the instrument is operated at atmospheric pressure and a
low pressure drop inlet is used. <italic>Alternative 2:</italic> this alternative is carried out by blocking the inlet and outlet, applying
overpressure or under pressure inside the instrument, and measuring the
flow rate required to maintain the constant pressure. The recommended range
is 50–100 mbar overpressure or under pressure. Overpressure above 200 mbar may
damage the instrument. <italic>Alternative 3:</italic> when the inlet is closed, the recorded sample flow
rate should drop to a value well below 10 L min<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. This
method is suitable for a quick check; however it is not completely reliable.</p>
      <p>The flow calibration should be done once a year during the long-term
operation, or before and after a short-term campaign measurement. However,
the flows should be determined always, when a blower is replaced or a large
leak is detected and sealed.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6"><caption><p>On the left: a dirty Venturi tube and its net, and a dirty flow
adjustment valve in a close-up from the NAIS operated in Marikana, South
Africa. Both were required to be cleaned well before the flow verification.
On the right: an example of a set-up for flow checks with external pressure
difference sensors, which are connected to the 5 Venturi tubes to record all
the values simultaneously, including the pressure difference over the
blower.</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/3577/2016/amt-9-3577-2016-f05.jpg"/>

          </fig>

</sec>
<sec id="Ch1.S3.SS1.SSSx2" specific-use="unnumbered">
  <title>Option A: flow verification with pressure sensors for the 1-blower
system</title>
      <p>For the 1-blower system, in Fig. 1a, one blower runs all the flows. Five
flow rates (sheath and output flows of both analysers and the total exhaust
flow) are measured with Venturi tubes. In normal operation only the exhaust
flow rate is measured continuously, as it is the most sensitive to the
changes of all the other flows. Each Venturi tube has an individual
calibration where an exact pressure drop, corresponding to the specified
flow rate, is determined in normal conditions. The Venturi calibration
values are provided by Airel Ltd, when the instrument is manufactured. The
Venturi calibration is not needed to be done by the user, but the pressure
drop should be verified and the flow adjusted, if needed. This procedure is
illustrated in Fig. 5. The differential pressure over the five Venturi tubes should
be measured with a reference differential pressure measurement device (e.g.
TESTO 512 0–2 hPa), and checked against the value obtained from the
calibration to be sure that the flow rate though the Venturi is correct. If
the checked pressure difference does not correspond to the calibrated ones,
the flows should be adjusted to match the calibrated pressure difference
while keeping a constant overpressure (80 mm H<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O) after the blower
(measured with, e.g. TESTO 512 0–20 hPa).</p>
      <p>The procedure for determining the flows for the 1-blower system is as
follows: first, the user verifies that the sample and outlet flows are equal
and no leaks exist. Second, the blower power should be adjusted so that the
overpressure after the blower is 80 mm H<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O. Third, each of the five
flows are measured via the pressure difference from the Venturi tubes, and
adjusted, if required, to match the values given in the Venturi calibration
(while keeping a constant overpressure after the blower). To adjust the
Venturi's pressure drop turn the brass knob which is located on a side of
the flow adjusting valve with pliers (middle bottom panel, Fig. 5). To fix
misbalanced flows, either the valve on the higher pressure drop side should
be slightly closed or the other valve slightly opened. Last, the user should
check that the sampling flow remains at <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 60 L min<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. For a full
pressure sensor calibration the user should contact Airel Ltd. to provide
detailed information on the flow calibration set-up and possibly update the
measurement software.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7"><caption><p>A quick and easy sheath flow check for 4-blower system using a TSI
flowmeter which is placed directly after the sheath air filter.</p></caption>
            <?xmltex \igopts{width=199.169291pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/3577/2016/amt-9-3577-2016-f06.jpg"/>

          </fig>

<?xmltex \hack{\newpage}?>
</sec>
<sec id="Ch1.S3.SS1.SSSx3" specific-use="unnumbered">
  <title>Option B: flow verification with flowmeters for 3- and 4-blower
systems</title>
      <p>For the 3- and 4-blower system, in Fig. 1b–c, the verification involves
measuring the volumetric flow rates with an external flowmeter (e.g. TSI
4000 series) at the instrument's exhausts and after the sheath air filters.
First, place a reference flowmeter at both exhausts (measure one exhaust
flow tube at time) to verify the sample flow at the Venturi tubes, which are
located just before the exhaust tubes. The sample flow and exhaust flow
should be identical when the instrument is not leaking. Second, disconnect a
sheath flow tube and place the flowmeter after the sheath air filter to
verify the sheath flow at Venturi tubes, which are located prior to the
blower and filter. Figure 6 shows a quick and easy way to check the sheath
flow of the negative polarity for the 4-blower system. Repeat this step for
the sheath flows for the both polarities. For a simple instrument check it
is sufficient to compare the reference flowmeter value to the corresponding
NAIS flowmeter value. Note that the NAIS flowmeters show the actual volume
flow rate that is not adjusted to standard temperature and pressure
conditions. A full flow sensor calibration can be done by the user but it
requires assistance from Airel Ltd. to provide a customized calibration
software, followed by processing the results and updating the measurement
software.</p>
      <p>In case of the 3- and 4-blower systems, the instrument includes a barometric
pressure sensor that is actively used to determine the correct flow rate.
The instrument sensor value should be compared to a reference barometric
pressure sensor and the calibration coefficients should be adjusted, if
necessary. To change these calibration coefficients, contact to Airel Ltd.</p>
      <p>In the case of the 3-blower system, there is only one sample flow Venturi
sensor in the instrument that measures the total flow from both analysers.
An additional step is required to confirm the sample flow balance of the
negative and positive analysers. This involves adjusting the two valves
before the Y-connector, where the sample flows join from both of the
analysers. The two Venturi tubes next to the valves should be measured
simultaneously using two handheld differential pressure sensors. The
calibrated values for these pressure differences are either written inside
the instrument or available from Airel Ltd. The valves should be adjusted
accordingly.</p>
</sec>
<sec id="Ch1.S3.SS1.SSS2">
  <title>CRITICAL: determining the voltages of the NAIS</title>
      <p>The response of the DMA high voltage (HV) supply should be followed from the
instrument diagnostics. Correct sizing of small ions and particles in the
DMA is highly sensitive to the accuracy of the applied HV. Particular care
is required particularly in the low voltage range, which is used to classify
the smallest ions. The voltages in the inner electrode are <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>9,
<inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>25, <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>220, and <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>800 V, depending on the polarity of the
DMA. For the newer versions of the NAIS manufactured after 2014 (serial
numbers NAIS27 and NAIS-4-1, and later) the corresponding voltages are
<inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>9, <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>35, <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>150, <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>700 V. To confirm the voltages
with an independent measurement, a HV-probe with ultra-low impedance should
be used.</p>
</sec>
<sec id="Ch1.S3.SS1.SSS3">
  <title>Determining the losses and sizing accuracy of the NAIS</title>
      <p>In the size range of the cluster ions and small neutral particles the
calibration is a challenging task due to limitations in the capability of
reference instruments, generation of proper calibration aerosols, and
instrumentation for the size-separation. Possible calibration set-ups are
presented in detail in Asmi et al. (2009), Gagné et al. (2011),
Kangasluoma et al. (2013) and Wagner et al. (2016). To determine the losses
and the sizing accuracy of the full size range of the NAIS requires an
extensive suite of instrumentation: (1) in the sub-10 nm size range with a
high resolution H-DMA (Herrmann-DMA; Herrmann et al., 2000; Kangasluoma et
al., 2016) to determine the transfer functions and losses, (2) monomobile
molecular standards (Ude and Fernández de la Mora, 2005) to determine specific mobility
calibration, and (3) a Hauke DMA (Winklmayr et al., 1991) to perform the
mobility and concentration calibrations in the size range from 4 to 40 nm.
Prior to the loss and mobility calibration, the flows need to be verified as
described above.</p>
      <p>Wagner et al. (2016) studied the accuracy of the NAIS in a supplementary
laboratory calibration. They concluded that in ion mode the sizing of the
NAIS was very accurate, regardless of the version of the data inversion, and
the ion number concentrations were underestimated 15–30 %, depending on
the version of the data inversion. Using a correction introduced by Wagner
et al. (2016), the uncertainty of the ion concentration measurement of the
NAIS can be reduced to <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 10 %, allowing the NAIS to be used
in quantitative ion cluster and charged particle studies.</p>
</sec>
</sec>
<sec id="Ch1.S3.SS2">
  <title>Instrument verification</title>
      <p>Prior to the field or laboratory measurements, the electrometer background
levels, and the balance of number concentration measured with the positive
and negative columns should be checked. Between calibrations the NAIS should
be regularly compared to a reference instrument for a period of few days per
year, especially during the long-term operation. The verification should
always be done when the measurement location changes.</p>
<sec id="Ch1.S3.SS2.SSS1">
  <title>Intercomparison with other instrumentation</title>
      <p>It is recommended that different methods are used in parallel to determine
the cluster and nucleation mode number concentration in order to avoid
misinterpretation of results (Kulmala et al., 2012). Participation in the
intercomparison workshop is recommended. Another opinion is to perform a
side-by-side intercomparison at the measurement site, if a suitable
supporting instrumentation is available (e.g. ion spectrometer, Gerdien
counter, condensation particle counter, differential/scanning mobility
particle sizer, or air conductivity measurement, e.g. Asmi et al., 2009;
Gagné et al., 2011).</p>
</sec>
<sec id="Ch1.S3.SS2.SSS2">
  <title>CRITICAL: balance between negative and positive measurement
columns</title>
      <p>To verify instrument operation prior a measurement campaign, the balance of
number concentration measured with the positive and negative columns should
be checked. The concentration verification can be done by generating
population of sample aerosol (in equilibrium charge distribution) and
measuring it with both columns. A good agreement (10–20 %) between the
polarities gives confidence that the instrument is working properly. In the
following sections we describe three options for the verification
experiments before instrument deployment.</p>
</sec>
<sec id="Ch1.S3.SS2.SSSx1" specific-use="unnumbered">
  <title>Option A: orange peeling experiment</title>
      <p>Peeling a citrus fruit and thus releasing D-limonene, a common monoterpene,
into the room air can lead to aerosol particle formation in the indoor
environment (Vartiainen et al., 2006). This is a fast, easy and cheap way to
generate nucleation mode aerosol particles over a whole size range of the
NAIS as the D-limonene oxidation products trigger the particle formation and
subsequent growth (Gagné et al., 2011). Finding the right amount of
fruits to peel to generate the correct amount of vapour can take a few
trials. Note that there should be sufficient ozone concentration and low
background aerosol concentration in the room to facilitate new particle
formation and growth.</p>
</sec>
<sec id="Ch1.S3.SS2.SSSx2" specific-use="unnumbered">
  <title>Option B: indoor and outdoor sampling experiment</title>
      <p>Fast concentration verification between the polarities can be done by
sampling from indoor and outdoor. The indoor sample due to efficient
air-conditioning is typically dominated by cluster ions and can be used to
check the balance between small ions, whereas outdoor sample has a typically
abundant Aitken mode and can be used to test larger ions and particles
(Hirsikko et al., 2007).</p>
</sec>
<sec id="Ch1.S3.SS2.SSSx3" specific-use="unnumbered">
  <title>Option C: a test with small ions from an external charger</title>
      <p>Extensive number concentrations in the range from <inline-formula><mml:math display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:msup><mml:mn> 10</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>–10<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msup></mml:math></inline-formula> cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
in both positive and negative cluster ions can
be generated by using an external radioactive source (Steiner et al., 2014).
A radioactive source producing bipolar charger ions should be placed right
in front of the NAIS inlet. By varying the flow rate through the external
charger, the user can vary the number concentration of the charger-generated
ions. This data verifies the balance between the positive and negative
cluster ions and their proper size classification. Please note that
typically the negative cluster ions have higher mobility than the positive
cluster ions. The charger ion size distribution also varies as a function of
carrier gas composition (Manninen et al., 2011).</p>
</sec>
</sec>
<sec id="Ch1.S3.SS3">
  <title>Instrument installation</title>
<sec id="Ch1.S3.SS3.SSS1">
  <title>CRITICAL: inlet design and installation</title>
      <p>A recommended inlet is a 50 cm-long metallic tube (diameter 35 mm) with a
bend (90<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> angle facing down) and metallic net (grid size 1 mm) in
the end of the inlet line; see Fig. 7. The brass inlet connector with a
metallic net inside (sold by Airel Ltd.) is recommended to be used. Although
the instrument and the inlet line can be placed vertically or horizontally,
the horizontal orientation for the inlet line is recommended. In the
vertical inlet set-up the precipitation may easily enter the instrument and
damage the instrument and lead to poor data quality. Sampling height depends
on the surroundings. It can vary from 2 to 15 m above ground level
(a.g.l.; height of the surrounding canopy/buildings). Note
that the Earth's electrode effect can cause an imbalance between polarities
(negative and positive ion number concentrations), when the inlet height is
below 4 m a.g.l. The ionosphere has positive charge and
Earth's surface has a negative charge. Thus, Earth's surface works as a
negative electrode which attracts the positive ions and repels the negative
ions close at ground level (Hoppel, 1967).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8"><caption><p>Example an aerosol sampling inlet for the NAIS used at K-puszta field station,
Hungary. A grid is missing in the top image from the end of the sampling
line. Below an instrument set-up on field.</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/3577/2016/amt-9-3577-2016-f07.jpg"/>

          </fig>

      <p>The inlet lines should include a proper rain cover as the rain droplets can
interfere the measured spectra (Tammet et al., 2009). In the field
conditions, the user should make sure that rain does not get into the
instrument enabled by high sampling flow rate. If there is a chance of water
dripping into the inlet, the end of the inlet tube should point at least
slightly downwards. A metallic grid in the inlet is recommended. The
performance of the mobility analyser is sensitive to insects and other
material which may settle on the electrodes or electrometers. These
impurities can cause corona discharge, noise and parasitic currents.
Furthermore, the pressure drop from the inlet to the instruments should be
kept in the range of few hPa. This is facilitated by a regular cleaning of
the inlet grid.</p>
</sec>
<sec id="Ch1.S3.SS3.SSSx1" specific-use="unnumbered">
  <title>Option A: inlet with a minimized diffusional and electrical
losses</title>
      <p>Due to diffusional losses of small particles the inlet lines needs to be
kept as short as possible and as straight as possible, while keeping the
flows close to laminar. Enhanced diffusional particle losses may occur in
the sampling lines with bends or elbows. The particle losses increase with a
decreasing radius of the bend. It is very essential that the inlet lines and
connectors should be made from a conductive material (preferably stainless
steel) to avoid losses caused by a static electric charge. Experience has
shown that non-conductive tubing (e.g. plastics) may remove a considerable
fraction of any charged particles by the unwanted electrostatic forces. A
rough estimation for particle losses should be done on the measurement site
after the installation by measuring with and without inlet set-up by
performing a short measurement exercise with and without the inlet
construction.</p>
</sec>
<sec id="Ch1.S3.SS3.SSSx2" specific-use="unnumbered">
  <title>Option B: an inlet with aerosol sample conditioning</title>
      <p>When working in a warm and humid atmospheric environment, dew point
temperature of the sample flow can reached in the measurement cabin or
container (20–25 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C). This requires that the aerosol sample flow
has to be dried, either directly in the sampling line or at the instrument.
During earlier deployments in South America (Backman et al., 2012) <italic>drying by heating</italic> has been
used for the NAIS. The inlet line and at the instrument is heated above
ambient temperature to avoid water condensing inside the tubing or the
instrument. At high altitude sites and other sites with heavy snow storms
heated inlet has been used to avoid ice blocking the inlet line. Heating of
the sample flow may change the sample by evaporating the most volatile
particulate species. To limit relative humidity in the aerosol sample flow,
we do not recommend a membrane dryer (e.g. Nafion<sup>™</sup> dryer), or a
silica-based aerosol diffusion dryer due to high aerosol sample flow rates
and increased diffusional losses of clusters and small particles. When
sampling in a highly polluted environment, we recommend adding a core
sampling inlet and a dilution of the sample with aerosol-free bypass flow
(<italic>drying by dilution</italic>; see Wagner et al., 2016).<?xmltex \hack{\newpage}?></p>
</sec>
<sec id="Ch1.S3.SS3.SSS2">
  <title>Sampling location and measurement set-up</title>
      <p>In a typical field operation, the NAIS should be placed indoors in an
air-conditioned space. The instrument should be operated in a temperature of
5–35 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C to avoid a malfunction of the electric circuits (chargers
and filters, HV supplies). The instrument inlet and the immediate vicinity
should be grounded well so that the sampled ions are not attracted by the
static charge on nearby surfaces. The instrument itself should be grounded
via the power cable. The measurement cycles should be set based on
scientific aims, briefly summarized in the sections below.</p>
</sec>
<sec id="Ch1.S3.SS3.SSSx3" specific-use="unnumbered">
  <title>Option A: ground site measurement</title>
      <p>In close to sea level, the NAIS software uses a fixed sheath-flow rate value
of 60 L min<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and a sample-flow rate value of 30 L min<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (1-blower system)
and 27 L min<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (3- and 4-blower system) per DMA, when calculating the ion and particle
number size distributions. The deviation of the flow rate from the default
value should be taken into account during subsequent data processing by
applying a correction to the number size distributions. The volumetric flow
rates are typically recorded by the instrument. However the measured
distributions are not automatically corrected in the case if the flow rates
deviate from the nominal values. When the sample-flow rate is recorded, the
ion and particle number concentrations can simply be multiplied by (default
flow rate) <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> (recorded or measured flow rate) ratio. When the sheath flow has
changed from default values the ion and particle size distributions should
be re-inverted (assistance from Airel Ltd. is needed). For the ground-based
measurements, the recommended measurement cycle is as follows: offset – 30; ions –
90; particles – 90.</p>
</sec>
<sec id="Ch1.S3.SS3.SSSx4" specific-use="unnumbered">
  <title>Option B: high-altitude site measurement</title>
      <p>At high-altitude sites, the NAIS (with 3- and 4-blower systems) volumetric
sample flow rate is kept constant whereas the sheath-flow rate is varied
automatically (Mirme et al., 2010). The automatic adjustment of the
sheath-flow compensates changes in the particle mobility in exceptionally
low or varying air pressures and temperatures. Thus, the classified particle
size range is kept invariant of the pressure and temperature changes. The
effect of ambient temperature variations to measured ion and charged
particle mobilities is considered small because of warming in the sampling
line. The 1-blower system is not recommended for high-altitude or aircraft
measurements and we recommend upgrading it into the 3- and 4-blower system.
Otherwise, the user needs to keep the blower operating in the right
volumetric flow range manually or apply a correction to the number size
distributions, and a separate airflow calibration is needed for the 1-blower
system in the variable environmental conditions.<?xmltex \hack{\newpage}?></p>
</sec>
<sec id="Ch1.S3.SS3.SSSx5" specific-use="unnumbered">
  <title>Option C: flight measurement</title>
      <p>Several improvements were made to the airborne NAIS to able to measure the
size distribution and concentration of ions as a function of altitude inside
a pressurized aircraft (see Mirme et al., 2010). When measuring inside a
pressurized aircraft, the instrument leaks have to be particularly well
controlled. We recommend using the upgraded 3- and 4-blower system in the
aircraft deployments. These versions of the NAISs automatically adjust the
aerosol sample- and sheath-flow rates so that the particle sizing and volume
sample-flow rate remain constant regardless of ambient pressure. Typical
modifications to the NAIS in the airborne measurements are (1) replacing the
electricity supply to match the system used in the aircraft, (2) designing a
special inlet system to sample air from outside the aircraft, (3) reinforcing
the instrument rack and attaching it into the aircraft frame, (4) modifying
the instrument for increased air tightness in the case it is used in a
pressurized cabin, and (5) setting the length of the measurement cycle to a
minimum. If the inlet is in over pressure, the exhaust flow may need to be
restricted with valves (e.g. adding some soft tubing and a pinch cock). For
the airborne measurements the recommended measurement cycle is as follows: offset –
30; ions – 45; particles – 45.</p>
</sec>
<sec id="Ch1.S3.SS3.SSSx6" specific-use="unnumbered">
  <title>Option D: laboratory and chamber measurement</title>
      <p>In chamber measurements, where it is required to minimize the amount of
sample air, the high sample flow rate of the NAIS is a challenge. In such an
application, the it is recommended to operate the NAIS with a recirculation system,
which dilutes the inlet sample flow with filtered air coming from the
exhaust of the instrument. In other words, the sample air from the chamber
is diluted with a portion of the exhaust air of the instrument, which is
filtered with a high-efficiency particulate air (HEPA, e.g. Camfil Megalam,
MD 14-305X305X66-10) filter and mixed with the sample air (in more details;
see Franchin et al., 2015). The pressure drop on the filter and dilution
mixer should be below 10 hPa to ensure that the sample flow blowers of the
NAIS are able to comfortably circulate the air. The use of the dilution
system allows reduction of the fresh sample flow from 54 to 20–30 L min<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>.</p>
      <p>Otherwise in the laboratory measurements, where the available sample flow
rate is limited and sampled concentrations are small, it is recommended to
use only one polarity (column) of the NAIS (e.g. Manninen, 2011) at a time
depending on the polarity of the user needs. This is possible only with the
4-blower system, where the columns work completely independently. To disable
one column, disconnect and close the corresponding tube at the inlet
Y-connector which divides the flows to the two analysers or alternatively
close the corresponding exhaust outlet. The instrument configuration files
should be modified to switch off the blowers for the disabled column. This
must be done to avoid damage to the blowers. When the NAIS is used in
aerosol exposure studies with extremely high concentrations (<inline-formula><mml:math display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:msup><mml:mn>10</mml:mn><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>–10<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msup></mml:math></inline-formula> cm<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, we recommend adding a core sampling inlet
with appropriate dilution as well.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F9" specific-use="star"><caption><p>The NAIS measurement software (Spectops.exe or Retrospect.exe) is
recommended to be used for checking that the instrument is operating
properly by following the steps listed in the figure.</p></caption>
            <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/3577/2016/amt-9-3577-2016-f08.png"/>

          </fig>

</sec>
</sec>
<sec id="Ch1.S3.SS4">
  <title>Monitoring and adjusting instrument parameters in varying
environmental conditions</title>
      <p>A large number of measurement parameters are automatically monitored by the
instrument. They include for example flow rates, blower control signals,
charger currents and filter voltages. Most of the parameters are
continuously checked by the Spectops measurement software and diagnostic
warning flags indicate if a problem is detected. The presence of a warning
does not definitely mean that the measurements are invalid. The user should
always understand and confirm the reason why the warning is raised and fix
the issue when necessary. Similarly, an absence of the warning signal does
not guarantee that the measurements are correct.</p>
      <p>The corona currents and filter voltages are adjusted by varying the HV
supply feed voltage. The discharger and the main charger are automatically
controlled with a feedback loop driven by the current measured from the
surrounding electrode. The post-filter is controlled according to the
current measured by the first electrometer channels in particles measurement
mode. The blowers are actively controlled according the measured flow
signals from the Venturi tubes.</p>
      <p>The automatic adjustment with the feedback works as long as all the feedback
controls are between 0.1 and 4.9 V which the NAIS user should check. A
sensor value starts to deviate from a target value if the control voltage
goes too close to 0.0 or 5.0 V. In more detail, in the Spectops diagnostic a
<italic>sensor value</italic> is the value measured by the analog–digital converter. It is converted to
the actual parameter value by a predefined equation (e.g. “airflow sensor”
to “airflow”). The parameters which are automatically controlled by the
digital feedback have a control and a target value. <italic>The target value</italic> is the ideal sensor
value, the goal (e.g. for the sample airflow speed the target value equals
the sensor voltage that matches 54 L min<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>). <italic>The control value</italic> is the output voltage of the
digital-analog converter that adjusts some function in the instrument (e.g.
airflow blowers). The algorithms will automatically adjust the control value
so that the sensor value matches target value (e.g. if airflow sensor is
below the airflow target the airflow control is consequently increased).</p>
<sec id="Ch1.S3.SS4.SSS1">
  <title>Monitoring the instrument performance</title>
      <p>The instrument operation should be checked daily by the user. Figure 8
summarizes a recommended checklist for instrument's performance monitoring.
Airel Ltd. provides tools for this. There are two programs in the
measurement software package provided with the NAIS: (1) Spectops for running the
measurements and viewing online data and (2) Retrospect for viewing and reprocessing
the recorded data offline. The Airel Ltd. has an extensive diagnostic
checklist in the NAIS manual: <uri>http://wiki.airel.ee/Docs/NaisManual</uri>. They are
not repeated here, but we recommend the user to follow the checklist.</p>
</sec>
<sec id="Ch1.S3.SS4.SSS2">
  <title>Flow measurement control settings</title>
      <p>The blowers are automatically adjusted using a software digital feedback
loop controller based on the flow sensors and barometric sensor so that the
mobility analysis and sampling volumetric flow rate remain constant. When
measuring through an inlet with a high pressure drop or in polluted
conditions, the blower might be under heavy strain as this requires the
blower to be operated with a higher voltage. A similar situation is reached,
when the flow resistance increases over time due to settled atmospheric
aerosols (instrument getting dirty). This calls upon a frequent cleaning of
the instrument in the polluted conditions.</p>
</sec>
<sec id="Ch1.S3.SS4.SSS3">
  <title>CRITICAL: controlling corona discharging</title>
      <p>To keep the corona charger efficiency at a constant level independent of
environmental conditions, the corona needle voltage is adjusted by varying
the HV supply feed voltage according to an active feedback loop. The
efficiency of the corona charger is directly determined by the charger ion
concentration, which is proportional to the electric current carried by the
corona ions to the surrounding electrode inside the charger volume. Thus,
the discharger and the main charger are controlled with a feedback loop
driven by the current measured from the surrounding electrode. In normal
operating conditions of the NAIS, the corona-needle voltage is in the range
of 2–3 kV. Over time the electrode (i.e. corona needle/wire) gets worn out
because of aerosol particles settling on the needle. This will typically
cause the corona voltage fluctuate as the corona ignition voltage increases
and a stable discharge can no longer be maintained. For this reason, the
NAIS corona needles need to be cleaned regularly.</p>
</sec>
<sec id="Ch1.S3.SS4.SSS4">
  <title>CRITICAL: adjusting the post-filter (i.e. electrical filter in
particle mode)</title>
      <p>In the particle mode the post-filters remove the cluster ions generated by
the corona chargers. The post-filter settings should be optimized according
to environmental conditions. Typically the filter operates with a voltage of
40–100 V. The corona-generated ions are at the same size range as the
smallest particles measured by the NAIS. The set point of the post-filtering
voltage is a compromise between the removal of corona-generated ions and the
penetration of small aerosol particles. The main electrical filter voltages
are adjusted by varying the HV supply feed voltage according to an active
feedback loop. In the 3- and 4-blower systems, the user can change the
target values by modifying the configurations with Spectops software (Mirme
and Mirme, 2013). In the 1-blower systems, the post-filter voltage is
adjusted by the user manually; see Supplement S2 for details. Figure 9 shows
when to change settings or adjust manually the post-filter during the
particle measurements. We recommend that in the continuous field
measurements the automatic adjustment is used, if possible. In the
laboratory experiments with rapidly changing or unusual aerosol
distributions, the automatic adjustment should be switched off (Manninen et
al., 2011).</p>
</sec>
</sec>
<sec id="Ch1.S3.SS5">
  <title>CRITICAL: maintenance requirements</title>
      <p>As important as the instrument verification, a regular maintenance of the
NAIS to maintain the calibration during the operation is critical. The
maintenance procedures include instrument cleaning, leak tests, and checks
on the condition of corona-needles, proper insulation between the inner and
outer electrodes, and proper instrument grounding and inlet operation.</p>
<sec id="Ch1.S3.SS5.SSS1">
  <title>Inlet cleaning</title>
      <p>The inlet net and inlet tubing should be cleaned thoroughly in 1–3 week
intervals to maintain the optimal aerosol sample flow and reduce the amount
of dirt settling on the analyzer. The required interval depends on the
local aerosol concentrations.</p>
</sec>
<sec id="Ch1.S3.SS5.SSS2">
  <title>Routine instrument cleaning</title>
      <p>During long-term operation the NAIS should be cleaned every 1–3 months due
to the deposition of particulate matter inside the instruments. Within the
cleaning procedures all parts, which are in contact with the sample- and
sheath-flow, should be thoroughly wiped using delicate task disposable wipes
(e.g. Kimberly-Clark Kimtech Science Kimwipes) and alcohol (e.g.
2-propanol). The wipes which get easily worn out and leave fibers should be
avoided. The metallic nets inside the Venturi flow tubes (i.e. tubes with
narrow slits for adjusting the volumetric flow) should be cleaned carefully.
When dirt settles onto the nets, the flow resistance increases, and
consequently the volume flow through the Venturi tubes decreases. This
alters the mobility classification. An ultrasonic bath is recommended for
cleaning these nets. Instead of nets, the instruments with 3 or 4-blowers
have typically honeycomb-shaped pieces to make the flow laminar. These are
less likely to become dirty and a careful cleaning with a brush or
pressurized air is sufficient. Overall, the 3- and 4-blower instruments are
significantly less susceptible to flow deviation issues. The corona-needle
chargers should be cleaned (scraped with a sharp knife) regularly (1–3 month
intervals) to make sure that the corona-generated ion concentration is
maintained at a constant level.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F10"><caption><p>Adjusting post-filter during the particle measurement mode: <bold>(a)</bold> what
to look for, when tuning the post-filter voltage for a bad column (here
negative polarity), and <bold>(b)</bold> how the particle number size distribution should
look like after the tuning.</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/3577/2016/amt-9-3577-2016-f09.png"/>

          </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F11"><caption><p>Cleaning electrometer rings by lifting away the sample
preconditioning unit (the top part of the NAIS) and using a long cleaning
rod to wipe the surface of outer electrode.</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/3577/2016/amt-9-3577-2016-f10.jpg"/>

          </fig>

</sec>
<sec id="Ch1.S3.SS5.SSSx1" specific-use="unnumbered">
  <title>Notice while cleaning the NAIS</title>
      <p>Use plenty of isopropanol and Kimwipes. Do not scratch the inner surfaces of the NAIS. Clean all the
surfaces which are in contact with the sample and sheath air flows. Do not
wipe the plastic parts with isopropanol, clean them with de-ionized water to
avoid leaving a conductive film on the surface. Always wear gloves when
handling the DMAs and sample preconditioning units. After the cleaning
procedures, check that the ion and particle number size distributions are
similar and form a continuous distribution before and after cleaning.</p><?xmltex \hack{\newpage}?><?xmltex \floatpos{t}?><fig id="Ch1.F12"><caption><p>Cleaning electrometer rings by opening the mobility analyzer and
wiping with a clean cloth.</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/3577/2016/amt-9-3577-2016-f11.jpg"/>

          </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F13"><caption><p>Opening and cleaning the dischargers (upper row) and the chargers
(bottom row).</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/3577/2016/amt-9-3577-2016-f12.jpg"/>

          </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F14" specific-use="star"><caption><p>Removing and cleaning the sheath air filters. Some of the newest
NAIS's do not have corona needle inside the sheath air filter.</p></caption>
            <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/3577/2016/amt-9-3577-2016-f13.jpg"/>

          </fig>

</sec>
<sec id="Ch1.S3.SS5.SSS3">
  <title>CRITICAL: cleaning the electrometer rings of the analyzer</title>
      <p>The number concentration of ions and aerosol particles are determined by
measuring a current delivered by the flow of charged particles to an
electrometer rings. The electrometers are extremely sensitive. The
deposition of dirt onto the electrometer ring can deteriorate the
signal-to-noise ratio of the electrometer. Dust or fibers that have settled on the
electrode may start to form an occasional corona discharge in the electric
field of the analyzer. This is the reason why the electrometers facing the
bottom inner electrode, which has the highest voltage, are the most likely
to become noisy (electrometers no. 13–21). We recommend wiping the
electrometer rings clean manually when the average current signal of a
certain electrometer increases above few tens of fA (10<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn>15</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> A) during
the offset measurement mode. See Supplement S1 for details.</p>
</sec>
<sec id="Ch1.S3.SS5.SSSx2" specific-use="unnumbered">
  <title>Option A: by lifting away the sample preconditioning units</title>
      <p>To clean the electrometer rings without removing and opening the mobility
analyzer, remove the top part of the instrument (i.e. sampling
preconditioning unit; see Fig. 1). Then use a cleaning rod to clean the
mobility analyzer by moving the rod from top to bottom. Figure 10 shows the
procedure. Before lifting the top part of the NAIS, ensure that you remove
all the nuts holding the plates together and disconnect all the cables
coming from the main compartment of the instrument, and disconnect sheath
air tubing between the top and bottom part of the NAIS (on both polarities).
The top part should be lifted up and placed onto a clean surface, while the
open analyzer should be covered to avoid dropping more dirt into it while
cleaning. Now the inner and outer electrode of the mobility analyzer (i.e.
electrometer rings) can be cleaned with the cleaning rod by moving it up and
down inside the analyzer. Avoid scratching the metallic surfaces. The
numbering of the electrometers starts from the top to bottom. Remember that
the electrometers detecting the smallest charged particles are at the top of
the analyzer.</p>
</sec>
<sec id="Ch1.S3.SS5.SSSx3" specific-use="unnumbered">
  <title>Option B: by opening the mobility analyzer</title>
      <p>To open the mobility analyzer it needs to be lifted away from its position.
The outer electrode of the analyzer should be lifted up, and separated from
the inner electrode. Supplement S1 shows, in detail, how to clean the
analyzers after opening the mobility analyzer. The electrometers are located
on the surface of the outer electrode, whereas the inner electrode has the
four voltage sectors to generate the electric field. Take care not to
scratch the inner electrode against the outer electrode. After the
electrodes are separated, it is possible to clean the electrometer rings by
wiping with a clean cloth and some strong solvent like alcohol or
isopropanol; see Fig. 11. Wiping should be done by starting from the centre
of the electrode and moving towards the top. Take particular care to clean
the gaps between the electrometer rings as well as their surfaces. Flip the
electrode upside down and repeat the operation to clean the bottom
electrometers.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F15" specific-use="star"><caption><p>Cleaning the corona needle with a sharp knife (left) or by rinsing
with a dissolvent (middle), and replacing a corona needle using tweezers
(right).</p></caption>
            <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/3577/2016/amt-9-3577-2016-f14.jpg"/>

          </fig>

</sec>
<sec id="Ch1.S3.SS5.SSS4">
  <title>Cleaning or replacing a corona needle</title>
      <p>The charging efficiency of the corona charger can change over time as the
electrode (i.e. corona needle/wire) gets worn out. For this reason, the NAIS
corona needles need to be cleaned regularly or replaced. To clean the corona
needles located in the preconditioning unit's charger or discharger, shown
in Fig. 12, or in the sheath air filter, shown in Fig. 13, the corresponding
parts of the NAIS need to be opened and the needles removed. As shown in
Fig. 14, the corona needle can be cleaned from dirt by gently scraping the
tip with a sharp knife or by dissolving the dirt. The corona needles break
and bend easily so minimum pressure should be applied. When the cleaning
does not restore the charging efficiency, the needle needs to be replaced.
When replacing the corona needle, be careful and handle the needle with flat
tip tweezers. See Supplement S2 for details.</p>
</sec>
<sec id="Ch1.S3.SS5.SSS5">
  <title>Replacing a blower</title>
      <p>A blower needs to be replaced, when the active feedback loop cannot maintain
the right volumetric flows for the sample and sheath flows, which leads to
wrong sizing of the aerosol particles. The blower must be sealed properly
and a leak test should be done to the instrument before determining the
flows. For the 1-blower system, the blower sealing should be done using
silicone (e.g. Bostik silicone universal) to seal both the blower itself and
to connect it in a leakproof manner to the metal casing, shown in Fig. 15.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F16"><caption><p>Procedure for replacing a blower for a 1-blower instrument.</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/3577/2016/amt-9-3577-2016-f15.jpg"/>

          </fig>

</sec>
</sec>
<sec id="Ch1.S3.SS6">
  <title>Data inversion</title>
<sec id="Ch1.S3.SS6.SSS1">
  <title>CRITICAL: electrical mobility to mobility diameter conversion</title>
      <p>The particle diameter is not a well-defined concept at very small sizes or
for highly non-spherical particles and agglomerates. We recommend using the
electrical mobility equivalent diameter as it can be converted back to the
particle electrical mobility, which is the measured quantity by the NAIS.
The electrical mobility (<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>Z</mml:mi><mml:mtext>p</mml:mtext></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> to particle diameter (<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mtext>p</mml:mtext></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> conversion
should follow the international standard ISO 15900, and use a Millikan–Fuchs
equivalent electrical mobility diameter which is based on Stokes' law
(Hinds, 1982)
              <disp-formula id="Ch1.E1" content-type="numbered"><mml:math display="block"><mml:mrow><mml:msub><mml:mi>Z</mml:mi><mml:mtext>p</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi>n</mml:mi><mml:mi>e</mml:mi><mml:msub><mml:mi>C</mml:mi><mml:mtext>c</mml:mtext></mml:msub><mml:mfenced open="(" close=")"><mml:msub><mml:mi>D</mml:mi><mml:mtext>p</mml:mtext></mml:msub></mml:mfenced></mml:mrow><mml:mrow><mml:mn mathvariant="normal">3</mml:mn><mml:mi mathvariant="italic">π</mml:mi><mml:mi mathvariant="italic">η</mml:mi><mml:msub><mml:mi>D</mml:mi><mml:mtext>p</mml:mtext></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where <inline-formula><mml:math display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula> is number of excess elementary charges <inline-formula><mml:math display="inline"><mml:mi>e</mml:mi></mml:math></inline-formula> carried by the particle,
<inline-formula><mml:math display="inline"><mml:mi mathvariant="italic">η</mml:mi></mml:math></inline-formula> is viscosity of air and <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>C</mml:mi><mml:mtext>c</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is the Cunningham slip correction
factor for taking account of relation between particle radius and mean free
path <inline-formula><mml:math display="inline"><mml:mi mathvariant="italic">λ</mml:mi></mml:math></inline-formula> of the gas molecules:
              <disp-formula id="Ch1.E2" content-type="numbered"><mml:math display="block"><mml:mrow><mml:msub><mml:mi>C</mml:mi><mml:mtext>c</mml:mtext></mml:msub><mml:mo>(</mml:mo><mml:msub><mml:mi>D</mml:mi><mml:mtext>p</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">λ</mml:mi></mml:mrow><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mtext>p</mml:mtext></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mfenced close=")" open="("><mml:mn>1.165</mml:mn><mml:mo>+</mml:mo><mml:mn>0.483</mml:mn><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn>0.997</mml:mn><mml:mstyle scriptlevel="+1"><mml:mfrac><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mtext>p</mml:mtext></mml:msub></mml:mrow><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">λ</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:msup></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
            Gas pressure and temperature affect viscosity and the mean free path.
Typically the particle size and the mean free path are presented as Knudsen
number <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi>n</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>/</mml:mo><mml:msub><mml:mi>D</mml:mi><mml:mtext>p</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>. The constants used in equations follow the
ISO15900 standardization as well Kim et al. (2005).</p>
      <p>Air viscosity can be written as follows:
              <disp-formula id="Ch1.E3" content-type="numbered"><mml:math display="block"><mml:mrow><mml:mi mathvariant="italic">η</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi mathvariant="italic">η</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:msup><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>T</mml:mi><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mstyle scriptlevel="+1"><mml:mfrac><mml:mn mathvariant="normal">3</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle></mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:mn>110.4</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mtext>K</mml:mtext></mml:mrow><mml:mrow><mml:mi>T</mml:mi><mml:mo>+</mml:mo><mml:mn>110.4</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mtext>K</mml:mtext></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">η</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>=</mml:mo><mml:mn>1.83245</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn>10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> kg m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>.
<inline-formula><mml:math display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula> is the air temperature and <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is a reference temperature (296.15 K). On
the other hand, the mean free path at a reference temperature <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>=</mml:mo><mml:mn>296.15</mml:mn></mml:mrow></mml:math></inline-formula> K and reference pressure <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>p</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>=</mml:mo><mml:mn>101.325</mml:mn></mml:mrow></mml:math></inline-formula> kPa is <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">λ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>=</mml:mo><mml:mn>67.3</mml:mn></mml:mrow></mml:math></inline-formula> nm and it can be scaled as follows (Allen and Raabe, 1985):
              <disp-formula id="Ch1.E4" content-type="numbered"><mml:math display="block"><mml:mrow><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi mathvariant="italic">λ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>T</mml:mi><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>p</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow><mml:mi>p</mml:mi></mml:mfrac></mml:mstyle></mml:mfenced><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:mn>110.4</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mtext>K</mml:mtext></mml:mrow><mml:mrow><mml:mi>T</mml:mi><mml:mo>+</mml:mo><mml:mn>110.4</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mtext>K</mml:mtext></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
            The classic Millikan equation may be inaccurate for the finest charged
nanometer particles and ions (e.g. Tammet, 1995, and references therein).
Mäkelä et al. (1996) analyzed phenomena in detail and compared
different mobility equivalent diameters. For the NAIS data, the electrical
mobility to electrical mobility equivalent diameter conversion is commonly
done following the suggestion of Mäkelä et al. (1996) using the
Cunningham slip correction factor with <inline-formula><mml:math display="inline"><mml:mrow><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>=</mml:mo><mml:mn>64.5</mml:mn></mml:mrow></mml:math></inline-formula> nm at 296.15 K
and 101.325 kPa:
              <disp-formula id="Ch1.E5" content-type="numbered"><mml:math display="block"><mml:mrow><mml:msub><mml:mi>C</mml:mi><mml:mtext>c</mml:mtext></mml:msub><mml:mfenced close=")" open="("><mml:msub><mml:mi>D</mml:mi><mml:mtext>p</mml:mtext></mml:msub></mml:mfenced><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">λ</mml:mi></mml:mrow><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mtext>p</mml:mtext></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mfenced close=")" open="("><mml:mn>1.246</mml:mn><mml:mo>+</mml:mo><mml:mn>0.420</mml:mn><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn>0.87</mml:mn><mml:mstyle scriptlevel="+1"><mml:mfrac><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mtext>p</mml:mtext></mml:msub></mml:mrow><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">λ</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:msup></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
            This approach is in excellent agreement with the ISO standard in
normal temperature and pressure (NTP) conditions (293.15 K, 1013.25 hPa). Note that the geometric diameter (i.e.
Tammet's mass diameter; Tammet, 1995), which is related to particle mass, is
about 0.3 nm smaller than the electrical mobility diameter (Mäkelä
et al., 1996; Ehn et al., 2011).</p>
</sec>
<sec id="Ch1.S3.SS6.SSS2">
  <title>CRITICAL: raw signal – electrometer currents</title>
      <p>The raw signal of the NAIS is calculated from the current <inline-formula><mml:math display="inline"><mml:mi>I</mml:mi></mml:math></inline-formula> (A) measured by
one of the NAIS electrometers, which is related to the sampled aerosol
concentration <inline-formula><mml:math display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> (ions cm<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> as follows:
              <disp-formula id="Ch1.E6" content-type="numbered"><mml:math display="block"><mml:mrow><mml:mi>I</mml:mi><mml:mo>=</mml:mo><mml:mi>N</mml:mi><mml:msub><mml:mi>n</mml:mi><mml:mtext>p</mml:mtext></mml:msub><mml:mi>e</mml:mi><mml:msub><mml:mi>Q</mml:mi><mml:mtext>s</mml:mtext></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>n</mml:mi><mml:mtext>p</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is the average number of elementary charge units per particle
(assumed to be unity), <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>e</mml:mi><mml:mo>=</mml:mo><mml:mn>1.6</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn>10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn>19</mml:mn></mml:mrow></mml:msup><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi>C</mml:mi></mml:mrow></mml:math></inline-formula> is the elementary
unit of charge, and <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mtext>s</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> (cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is the volumetric sample flow
rate passing the electrometer. When the average number of elementary charge
units per particle is known, the aerosol concentration can be calculated
from Eq. (6).</p>
      <p>The NAIS measures all electrometer signals approximately 12 times per
second. Data is averaged typically over 1 s, 10 s and measurement
cycle (block) periods. The instrument measures a large number of secondary
parameters that describe the detailed state of the whole system. The average
electrometer signals together with the secondary measurement parameters are
stored into record files by the Spectops measurement software.</p>
      <p>The average electrometer signals are converted into ion mobility or particle
size distributions by the Spectops software and stored in spectra files. The
distribution is calculated using the generalized least squares method to
find the size or mobility distribution that best matches the measured
electrometer currents according to the instrument matrix while taking into
account the noise level estimates. The instrument matrix is based on a
mathematical model of the instrument that considers particle losses,
charging probability (in case of particle mode measurements), electric field
and air flow inside the mobility analyzer.</p>
      <p>It is important that the user always stores the record files together with
the spectra files containing the measured distributions. The secondary
measurement parameters stored in the record files are vital for confirming
the validity of the measurements and for problem diagnostics with the
instrument. The spectra files can be recalculated from the electrometer
signals stored in the record files as part of pre-processing and data
analysis.</p>
</sec>
<sec id="Ch1.S3.SS6.SSS3">
  <title>On the assumption of equilibrium charge distribution</title>
      <p>The sampled particles are assumed to be in charge equilibrium. The particle
charging probability is predicted by Fuchs' diffusion charging theory (Fuchs
and Sutugin, 1971). At a constant corona-wire current, the aerosol charging
depends mainly on the particle size, on the charger ion concentration and on
the residence time of the aerosol in the charging region. The product of the
latter two is called nt product. The model that performs the NAIS inversion,
takes into account measured aerosol volumetric flow rates, particle charging
probabilities, size dependent loss factors, and the charging parameter (i.e.
nt product). The charging probabilities use a calibrated charging parameter
<inline-formula><mml:math display="inline"><mml:mrow><mml:mi mathvariant="italic">α</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:math></inline-formula>, which translates to nt <inline-formula><mml:math display="inline"><mml:mrow><mml:mo>=</mml:mo><mml:mn>2.22</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn>10</mml:mn><mml:mn mathvariant="normal">6</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> for a
mobility of 1.5 cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> V<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. According to these numbers, 1 %
of 1 nm particles and 5 % of 5 nm particles are singly charged.</p>
      <p>Although the data inversion assumes that the sampled particles are in a
charge equilibrium, the unipolar charger does not neutralize the aerosol
sample entering the NAIS (McMurry et al., 2009). Thus, if the sample is
highly overcharged, this can lead to an overestimation of the ion and
particle concentrations.</p>
</sec>
<sec id="Ch1.S3.SS6.SSS4">
  <title>CRITICAL: on the assumption of singly charged ions and
particles</title>
      <p>In the ion mode, the inversion considers only charged particle mobility. It
does not make assumptions about their charging probability or background
aerosols. Therefore, it produces a mobility distribution which the user will
later convert into a size distribution assuming that all the detected ions
are singly charged. To simplify, in ion mode we make an assumption that all
charged particles are singly charged. In practice, this means that ion
concentrations in the size range from <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 20 to 40 nm may be
overestimated and the shape of the distribution may be distorted as a part
of these particles carry more than one charge.</p>
      <p>Moreover, Alguacil and Alonso (2006) reported that when using a corona
discharge, a substantial fraction of doubly charged particles occur in the
particle diameters down to <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 15 nm. Therefore, the measurement
uncertainty of the NAIS increases above 20 nm because the corresponding
electrometers are also affected by the multiply charged particles with
diameters up to 90 nm. Due to the limited mobility the range of the DMA, the
data inversion cannot completely account for these effects stemming from
larger particles. Therefore, we recommend that the ion and particle number
size distributions above 20 nm should be utilized with caution. One
possibility is to merge the number size distribution measured with the NAIS
into a distribution measured with, e.g. a differential mobility particle sizer
(DMPS, Wiedensohler et al., 2012) in size range from 10 to 1000 nm to obtain
information on the background aerosol population to be used in the data
inversion (e.g. Kulmala et al., 2012).</p>
</sec>
<sec id="Ch1.S3.SS6.SSS5">
  <title>Instrument function: transfer functions and loss estimation</title>
      <p>A detailed description of the mathematical model of the NAIS is presented in
Mirme and Mirme (2013). The instrument response of the NAIS is a set of
electric currents that are generated by the flux of ions precipitating on
the collecting electrodes. An ion mobility distribution <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>f</mml:mi><mml:mo>(</mml:mo><mml:mi>z</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is linked with the
electrometer currents <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math display="inline"><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mi mathvariant="normal">…</mml:mi><mml:mi>n</mml:mi></mml:mrow></mml:math></inline-formula>) using the analyzer
response function <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>G</mml:mi><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> as follows:
              <disp-formula id="Ch1.E7" content-type="numbered"><mml:math display="block"><mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mo movablelimits="false">∫</mml:mo><mml:mfenced open="[" close="]"><mml:mi>e</mml:mi><mml:mi>G</mml:mi><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi><mml:mo>)</mml:mo></mml:mfenced><mml:mi>f</mml:mi><mml:mo>(</mml:mo><mml:mi>z</mml:mi><mml:mo>)</mml:mo><mml:mtext>d</mml:mtext><mml:mi>z</mml:mi><mml:mfenced open="(" close=")"><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>n</mml:mi></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where <inline-formula><mml:math display="inline"><mml:mi>e</mml:mi></mml:math></inline-formula> is the elementary charge.</p>
      <p>The analyzer transfer function <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>G</mml:mi><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is the response of an electrometer <inline-formula><mml:math display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula> to a
singly charged ion with a mobility of <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula>. The function is derived in a
straightforward way presented in Mirme and Mirme (2013) and it is verified by
calibration measurements in the ions mode. Diffusion losses for the sampled
particles inside the instrument are estimated by fitting a diffusion length
parameter of the instrument model to the ion mode calibration results. The
diffusion and electrostatic losses in the sampling lines prior to the
instrument should be taken into account by the user.</p>
      <p>During particles measurements, the corona charger is active. The instrument
response in the particles mode includes the charging probability function<inline-formula><mml:math display="inline"><mml:mrow><mml:mi>P</mml:mi><mml:mo>(</mml:mo><mml:mi>q</mml:mi><mml:mo>,</mml:mo><mml:mi>r</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>:

                  <disp-formula specific-use="align" content-type="numbered"><mml:math display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E8"><mml:mtd/><mml:mtd><mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mo movablelimits="false">∫</mml:mo><mml:mfenced close="]" open="["><mml:mi>e</mml:mi><mml:msub><mml:mo>∑</mml:mo><mml:mi>q</mml:mi></mml:msub><mml:mi>q</mml:mi><mml:mi>G</mml:mi><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi><mml:mo>(</mml:mo><mml:mi>r</mml:mi><mml:mo>,</mml:mo><mml:mi>q</mml:mi><mml:mo>)</mml:mo><mml:mo>)</mml:mo><mml:mi>P</mml:mi><mml:mo>(</mml:mo><mml:mi>q</mml:mi><mml:mo>,</mml:mo><mml:mi>r</mml:mi><mml:mo>)</mml:mo></mml:mfenced><mml:mi>f</mml:mi><mml:mo>(</mml:mo><mml:mi>r</mml:mi><mml:mo>)</mml:mo><mml:mtext>d</mml:mtext><mml:mi>r</mml:mi></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>n</mml:mi><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

              where <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>f</mml:mi><mml:mo>(</mml:mo><mml:mi>r</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is the particle size distribution and<inline-formula><mml:math display="inline"><mml:mrow><mml:mi>P</mml:mi><mml:mo>(</mml:mo><mml:mi>q</mml:mi><mml:mo>,</mml:mo><mml:mi>r</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is the probability that a
particle with a radius of <inline-formula><mml:math display="inline"><mml:mi>r</mml:mi></mml:math></inline-formula> carries <inline-formula><mml:math display="inline"><mml:mi>q</mml:mi></mml:math></inline-formula> elementary charges.</p>
      <p>The analyzer transfer function <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>G</mml:mi><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>z</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is identical for both ions and particles
measurements. The charging probability function <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>P</mml:mi><mml:mo>(</mml:mo><mml:mi>q</mml:mi><mml:mo>,</mml:mo><mml:mi>r</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is based on a theoretical
charging model. The function is adjusted and verified using calibration
measurements in the particles mode.</p>
      <p>The data inversion finds an approximate ion mobility distribution <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>f</mml:mi><mml:mo>(</mml:mo><mml:mi>z</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> or
particle size distribution <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>f</mml:mi><mml:mo>(</mml:mo><mml:mi>r</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> that best satisfies Eq. (7) or (8). The
distributions are estimated as a sum of predefined elementary distributions
<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>r</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>.
              <disp-formula id="Ch1.E9" content-type="numbered"><mml:math display="block"><mml:mrow><mml:mi>f</mml:mi><mml:mo>(</mml:mo><mml:mi>r</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:msub><mml:mo>∑</mml:mo><mml:mi>j</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>⋅</mml:mo><mml:msub><mml:mi>F</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>r</mml:mi><mml:mo>)</mml:mo><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
            This allows to transform Eq. (7) or (8) to an equivalent matrix form as
follows:
              <disp-formula id="Ch1.E10" content-type="numbered"><mml:math display="block"><mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mo>∑</mml:mo><mml:mi>j</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="bold">H</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub><mml:mo>⋅</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">ϕ</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>n</mml:mi><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where <inline-formula><mml:math display="inline"><mml:mi mathvariant="bold">H</mml:mi></mml:math></inline-formula> is the instrument matrix and <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>H</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> determines the response of the
electrometer <inline-formula><mml:math display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula> to the predefined distribution <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>r</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. The data inversion
procedure solves the matrix Eq. (10) for the spectrum vector <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">ϕ</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>
and calculates the size or mobility distribution estimate using Eq. (6).</p>
      <p>The ratio of sample flow to total analyzer flow is about 1 : 3 for the NAIS,
which is quite large and therefore even perfectly monomobile particles will
have a response on several electrometers. For the particles with diameters
above 20 nm the probability of acquiring more than one elementary charge in
the corona charger is non-negligible. Hence the electrometer response for
the larger particles becomes even wider. This also means that the measured
electrometer signal may be a combination of by both singly charged smaller
particles and multiply charged larger particles with the same mobility.</p>
      <p>The multiply charged particles do not require special treatment in the data
inversion. They are naturally included in the calculated response of the
electrometers, i.e. the instrument matrix. However, the uncertainty of the
measurement results gradually increases for particle sizes above 20 nm
because the electrometer responses become less distinguishable for the
larger particles and because a gradually larger portion of the response will
be lost beyond the mobility range of the NAIS.</p>
</sec>
<sec id="Ch1.S3.SS6.SSSx1" specific-use="unnumbered">
  <title>Additional particle losses</title>
      <p>The electrostatic losses inside the
corona charger during charging process lead to underestimation of the
particle concentration (Alonso et al., 2006; Huang and Alonso, 2011). The
diffusion losses decrease and electrostatic loss increase as the charger
voltage is increased, whereas charging efficiency increases with particle
size and charger voltage. Electrostatic loss of small particles increases
with decreasing particle diameter. The electrostatic losses in the sampling
lines prior to the instrument should be taken into account by the user.</p>
</sec>
</sec>
<sec id="Ch1.S3.SS7">
  <title>Data processing</title>
      <p>To obtain the aerosol size distribution, <inline-formula><mml:math display="inline"><mml:mrow><mml:mtext>d</mml:mtext><mml:mi>N</mml:mi><mml:mo>/</mml:mo><mml:mtext>d</mml:mtext><mml:mo>(</mml:mo><mml:msub><mml:mi>log⁡</mml:mi><mml:mn>10</mml:mn></mml:msub><mml:msub><mml:mi>D</mml:mi><mml:mtext>p</mml:mtext></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, from the current
signal caused by charged particles and the voltages applied in the
classification, the data inversion take into account the charge distribution
of the aerosol particles, the flows rates, the DMA transfer functions, the
detection efficiency of the detector and size dependent losses in the
instrument. In the ion mode, the Spectops inversion algorithm converts raw
signal from 21 electrometers into 28 normalized mobility fractions, whereas
in the particle mode, the raw data is converted into 29 size fractions. In
the data processing the user should do the following quality checks and
corrections for the NAIS data.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F17"><caption><p>Typical faulty ion number size distributions before (left column,
problematic area boxed) and after (right column) cleaning and quality
checks. The bad or missing data was selected and replaced with <inline-formula><mml:math display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn>999.99</mml:mn></mml:mrow></mml:math></inline-formula> using
a MATLAB script. The faulty data was caused by <bold>(a)</bold> continuously noisy
electrometer, <bold>(b)</bold> bad grounding at the top of the DMA (partly missing cluster
ions), <bold>(c)</bold> dirt in the bottom of the DMA (high noise), and <bold>(d)</bold> classifying
electric field inside the DMA as not correct due to a bad BNC (Bayonet–Neill–Concelman) cable connection
(intermediate ions missing).</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/3577/2016/amt-9-3577-2016-f16.png"/>

        </fig>

<sec id="Ch1.S3.SS7.SSS1">
  <title>Data cleaning and quality check</title>
      <p>After the data collection and prior to the data analysis, the data should be
quality controlled. The bad data should be removed from the final data.
Figure 16 illustrates some examples of typical faulty spectra and the data needed
to be removed. Data quality checks and criteria, which should be fulfilled
for the ion number size distributions, are the following: (1) negative and positive ion number size distribution agree
visually (a similar distinct shape for number size distributions in both
polarities), (2) size distribution has a continuous cluster ion mode visible
in both polarities with a mode peak at <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 1 nm; see Fig. 16b,
(3) when looking at the negative ion size distribution, the mean diameter of
cluster ion mode should be slightly smaller compared to positive cluster
ions (typically one channel difference between the peaks for the
polarities), (4) in the number size distribution plots, the smallest of
Aitken mode charged particles should be visible and have a diurnal variation
at 25–42 nm size range, and (5) time series of total ion number
concentration between polarities should agree within 10–20 %, which should apply
to small, intermediate ions and large ion concentrations as well, and (6) when intermediate ions are observed, make sure that
the size distribution does not have any gaps due to instrument malfunction;
see Fig. 16d.</p>
      <p>The primary data quality checks for the particle number size distributions are similar as for the ion data. In
addition, check that the corona-charger-generated ions do not dominate the
particle spectra due to inadequate post-filter settings: (1) the 2–3 nm
particle concentrations should remain in a range of <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 200–700 cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>,
when no new particle formation event is taking place to maintain
optimal post-filter setting, (2) determine the smallest detectable size using
both positive and negative polarities (see Sect. 3.7.4), and (3) select the
preferred polarity to give the final data for measured particle number size
distribution (Sect. 3.7.5).<?xmltex \hack{\newpage}?></p>
      <p>If possible the ion and particle data measured with the NAIS should be
crosschecked with the data from additional instruments. The data quality
check for the offset mode: electrometer currents during offset measurements
should not exceed <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>10 fA.</p>
</sec>
<sec id="Ch1.S3.SS7.SSS2">
  <title>Ion data: converting from mobility distribution to size
distributions</title>
      <p>In the ion mode, the Spectops inversion algorithm converts signal from 21
electrometer signals into 28 normalized ion mobility distributions,
<inline-formula><mml:math display="inline"><mml:mrow><mml:mtext>d</mml:mtext><mml:mi>N</mml:mi><mml:mo>/</mml:mo><mml:mtext>d</mml:mtext><mml:mo>(</mml:mo><mml:msub><mml:mi>log⁡</mml:mi><mml:mn>10</mml:mn></mml:msub><mml:msub><mml:mi>Z</mml:mi><mml:mtext>p</mml:mtext></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, which the user has to convert into ion size distributions,
<inline-formula><mml:math display="inline"><mml:mrow><mml:mtext>d</mml:mtext><mml:mi>N</mml:mi><mml:mo>/</mml:mo><mml:mtext>d</mml:mtext><mml:mo>(</mml:mo><mml:msub><mml:mi>log⁡</mml:mi><mml:mn>10</mml:mn></mml:msub><mml:msub><mml:mi>D</mml:mi><mml:mtext>p</mml:mtext></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. We recommend doing the mobility to diameter conversion using
the Millikan–Fuchs equivalent mobility diameters introduced in Sect. 3.6.1.</p>
      <p>To do this, the user should follow steps: (1) Open the spectra data files to
get the geometric means of all 28 mobility fractions and calculate the lower
and upper mobility limits for each mobility fraction. (2) Calculate the
<inline-formula><mml:math display="inline"><mml:mrow><mml:mtext>d</mml:mtext><mml:mo>(</mml:mo><mml:msub><mml:mi>log⁡</mml:mi><mml:mn>10</mml:mn></mml:msub><mml:msub><mml:mi>Z</mml:mi><mml:mtext>p</mml:mtext></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> for all the mobility fractions using these limits.
(3) Calculate the absolute number concentration for each mobility fraction
starting from the normalized ion mobility fractions:
(<inline-formula><mml:math display="inline"><mml:mrow><mml:mtext>d</mml:mtext><mml:mi>N</mml:mi><mml:mo>/</mml:mo><mml:mtext>d</mml:mtext><mml:mo>(</mml:mo><mml:msub><mml:mi>log⁡</mml:mi><mml:mn>10</mml:mn></mml:msub><mml:msub><mml:mi>Z</mml:mi><mml:mtext>p</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>×</mml:mo><mml:mtext>d</mml:mtext><mml:mo>(</mml:mo><mml:msub><mml:mi>log⁡</mml:mi><mml:mn>10</mml:mn></mml:msub><mml:msub><mml:mi>Z</mml:mi><mml:mtext>p</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mtext>d</mml:mtext><mml:mi>N</mml:mi></mml:mrow></mml:math></inline-formula>.
(4) Calculate the corresponding mobility diameters for each mobility fraction
limits by determining the lower and upper limiting diameters, and  calculate the <inline-formula><mml:math display="inline"><mml:mrow><mml:mtext>d</mml:mtext><mml:mo>(</mml:mo><mml:msub><mml:mi>log⁡</mml:mi><mml:mn>10</mml:mn></mml:msub><mml:msub><mml:mi>D</mml:mi><mml:mtext>p</mml:mtext></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>
for all size fractions. (5) Normalize the absolute concentrations using the determined
size fractions: <inline-formula><mml:math display="inline"><mml:mrow><mml:mtext>d</mml:mtext><mml:mi>N</mml:mi><mml:mo>×</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mtext>d</mml:mtext><mml:mo>(</mml:mo><mml:msub><mml:mi>log⁡</mml:mi><mml:mn>10</mml:mn></mml:msub><mml:msub><mml:mi>D</mml:mi><mml:mtext>p</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mtext>d</mml:mtext><mml:mi>N</mml:mi><mml:mo>/</mml:mo><mml:mtext>d</mml:mtext><mml:mo>(</mml:mo><mml:msub><mml:mi>log⁡</mml:mi><mml:mn>10</mml:mn></mml:msub><mml:msub><mml:mi>D</mml:mi><mml:mtext>p</mml:mtext></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>.</p>
</sec>
<sec id="Ch1.S3.SS7.SSS3">
  <title>CRITICAL: correction for diffusional losses at sampling line</title>
      <p>Diffusion losses inside the sampling lines prior to the instrument; see Fig. 7
(upper panel), should be taken into account by post-processing of the
data. The particle losses by diffusion in a straight inlet line can be
described by calculating a size-dependent particle penetration (Hinds,
1982). In laminar flow, these losses depend only on the line length, the
flow rate through the line, and the particle size. In cases that bends
cannot be avoided in the sampling pipe, the size-depended particle
penetration can be calculated according to Wang et al. (2002).</p>
</sec>
<sec id="Ch1.S3.SS7.SSS4">
  <title>Particle data: determining the smallest detectable size</title>
      <p>In the particle mode, the raw data is typically converted into 29 particle
size distributions, <inline-formula><mml:math display="inline"><mml:mrow><mml:mtext>d</mml:mtext><mml:mi>N</mml:mi><mml:mo>/</mml:mo><mml:mtext>d</mml:mtext><mml:mo>(</mml:mo><mml:mi>log⁡</mml:mi><mml:mn>10</mml:mn><mml:msub><mml:mi>D</mml:mi><mml:mtext>p</mml:mtext></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, by the Spectops software. During the
particle mode measurements, the corona-generated ions complicate the
particle detection as the measurement size range overlaps the size range of
the charger ions. The positive and negative corona-generated ions are
smaller than 1.8 and 1.6 nm, respectively, which results in the lower
detection limit of approximately 2 nm for the NAIS particle measurements
(Manninen et al., 2011). Therefore, the particles below about 2 nm cannot be
reliably distinguished from the corona-generated ions. Typically, the lowest
detection limit for the NAIS in the particle mode is between 2 and 3 nm
depending on the corona voltage and on the properties and composition of
carrier gas (environmental conditions). It is important to notice that the
lowest detection limit of the NAIS varies according to the environmental
conditions (Manninen et al., 2011). The lowest detectable size of the NAIS
in particle mode should be checked on regular basis, at least separately for
different seasons.</p>
      <p>During subsequent data processing the corona-generated ions below the lowest
detection limit should be always cut out of the particle number size
distribution. The lowest detection of the NAIS is equal to the upper edge of
the corona ion size distribution which is illustrated with the gray shaded
area in Fig. 3. The determination of the lower detection limit should be
done always when no new particle formation (i.e. natural cluster activation
and growth) is taking place. If possible, after removing the corona ions
from the particle number size distribution, the particle concentrations in
the 2-3 nm range should remain in a concentration range of <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 200–700 cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
to make sure that not all charged particles are cut out
together with the corona-generated ions.</p>
</sec>
<sec id="Ch1.S3.SS7.SSS5">
  <title>Particle data: selecting preferred polarity of corona
discharging</title>
      <p>Due to the design of the instrument, the particle spectra (i.e. particle
number size distribution) is measured with both positive and negative corona
charging. Ideally the distributions should be identical. A large and a
persistent difference may indicate a problem with the measurements. We
recommend giving only one particle spectra in the final processed data to
avoid misunderstanding. Thus, the user needs to decide on the preferred
polarity on the particle data, which is reported as the final particle
number size distribution. Typically, the preferred polarity is chosen with
two main criteria: (1) the polarity which has lower background level of the
corona-charger ions extending to 2–3 nm size range (which is considered the
lowest detection limit of the NAIS in particle mode); (2) the polarity, which
shows no short-term fluctuation over time (i.e. corona-charger ion
background stays same level over a diurnal cycle). (3) The small
corona-charger ion background (<inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 10<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> should be visible
at 2–3 nm to be sure that the particles in the aerosol sample are not
filtered with the electric post-filter.</p>
</sec>
</sec>
</sec>
<sec id="Ch1.S4">
  <title>Troubleshooting</title>
      <p>The troubleshooting, in Table 2 lists how to recognize a faulty spectrum,
identify potential problems and their corresponding solutions ranging from
the instrumental to software issues. For further NAIS problem solving and
identifying symptoms while operation; see Supplement S2.<?xmltex \hack{\newpage}?></p>
</sec>
<sec id="Ch1.S5">
  <title>Anticipated results</title>
      <p>The list of locations and altitudes, where frequent aerosol particle
formation has been observed, is still growing as new measurement campaigns
are organized and field sites are established. A recent review is presented
in Hirsikko et al. (2011).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F18"><caption><p>An exemplary negative ion number size distribution during a new
particle formation measured with the NAIS (upper panel), and concentration
of negative cluster ions (0.8–2.0 nm), intermediate ions (2.0–7.0 nm),
large ions (7.0–20 nm) and gas phase sulfuric acid (lower panel) on 5 May
2007 in Hyytiälä.</p></caption>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/3577/2016/amt-9-3577-2016-f17.png"/>

      </fig>

<?xmltex \floatpos{p}?><table-wrap id="Ch1.T2" specific-use="star"><caption><p>Troubleshooting.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="150.799606pt"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="150.799606pt"/>
     <oasis:colspec colnum="3" colname="col3" align="justify" colwidth="150.799606pt"/>
     <oasis:thead>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Problem</oasis:entry>  
         <oasis:entry colname="col2">Possible reason</oasis:entry>  
         <oasis:entry colname="col3">Solution</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">  
         <oasis:entry namest="col1" nameend="col3" align="left">Particle/ion distribution issues: </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">No ions observed. <?xmltex \hack{\hfill\break}?>Ion number size distribution spectra in Spectops screen is blue.</oasis:entry>  
         <oasis:entry colname="col2">Instrument or inlet is not properly grounded or inlet tube is too long. <?xmltex \hack{\hfill\break}?>Offset measurements have a problem.</oasis:entry>  
         <oasis:entry colname="col3">Make proper grounding using a metallic wire. Shorten the inlet. <?xmltex \hack{\hfill\break}?>To test the inlet losses, remove the inlet temporarily (see Sect. 3.3.1).</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">The particle or ion number size spectrogram has a continuous or intermittent high concentration as a function of time at a certain size or mobility indicated with a red stripe in the data. <?xmltex \hack{\hfill\break}?>One of the electrometers is saturated continuously.</oasis:entry>  
         <oasis:entry colname="col2">One or more electrometers is noisy or have a high offset current due to settled dirt or fibers inside the analyzer.</oasis:entry>  
         <oasis:entry colname="col3">Clean the corresponding electrometer rings of that polarity (Sect. 3.5.3). <?xmltex \hack{\hfill\break}?> <italic>Note: Opening the mobility analyzer and cleaning it can end up making it dirtier, if not done in a clean environment.</italic></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">No cluster (small) ions detected and a high concentration peak at around 5 nm. Otherwise ion spectra look normal.</oasis:entry>  
         <oasis:entry colname="col2">The top part of the inner electrode of the DMA is short circuited to zero potential. There is no electric field to classify small ions. This happens, when the isolation of one of the three centring rods of the “cartwheel” is damaged.</oasis:entry>  
         <oasis:entry colname="col3">Remove the preconditioning unit. Open the top part of the DMA and check the isolation between the inner and outer electrode of the DMA. Isolation is created with a round metallic connector (check that 3 rubber rings around the wires are on their place). <?xmltex \hack{\hfill\break}?> <italic>Note, during transportation and routine cleaning these rubber rings move easily.</italic></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Number concentrations measured in positive and negative polarity are not corresponding (not matching), Sect. 3.2.2).</oasis:entry>  
         <oasis:entry rowsep="1" colname="col2">Airflows are not correct. Instrument might have a leak.</oasis:entry>  
         <oasis:entry rowsep="1" colname="col3">Check instrument software warnings related to sample and sheath flows. <?xmltex \hack{\hfill\break}?>See the instructions for general ”Airflow related issues” below.</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry rowsep="1" colname="col2">The preconditioning unit has a problem: cables disconnected or switched.</oasis:entry>  
         <oasis:entry rowsep="1" colname="col3">Check that all the plugs connect properly to the correct sockets in the preconditioning unit. <?xmltex \hack{\hfill\break}?>Check software warnings related to chargers and filters.</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">The electric fields are not symmetric on both polarities.</oasis:entry>  
         <oasis:entry colname="col3">Check DMA voltages (Sect. 3.1.2).</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Total particle spectra appears continuously red in colour at Spectops screen with very high concentrations (<inline-formula><mml:math display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:msup><mml:mn>10</mml:mn><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>–10<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. <?xmltex \hack{\hfill\break}?>The upper edge of the corona charger ions is larger than 3 nm in particle mode (Sect. 3.7.4).</oasis:entry>  
         <oasis:entry colname="col2">Corona charger ions are not removed properly by the post-filter.</oasis:entry>  
         <oasis:entry colname="col3">Adjust the post-filter voltage (Sect. 3.4.4).</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Ion and particle spectra in Spectops is red for few hours but instrument recovers itself. <?xmltex \hack{\hfill\break}?> <italic>Note: High concentrations more in negative polarity.</italic></oasis:entry>  
         <oasis:entry colname="col2">Especially during rain and snow, some water might get inside instrument settle on the electrometers.</oasis:entry>  
         <oasis:entry colname="col3">Clean and dry the instrument <?xmltex \hack{\hfill\break}?>(see Sects. 3.5.1–3.5.2 and 3.5.5).</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">There are random vertical stripes in the spectrograms.</oasis:entry>  
         <oasis:entry colname="col2">The central electrode voltage source is not stable. This induces simultaneous and identical fluctuations in many neighbouring electrometers.</oasis:entry>  
         <oasis:entry colname="col3">The central electrode voltage source needs repairs or replacement.</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<?xmltex \hack{\addtocounter{table}{-1}}?><?xmltex \floatpos{t}?><table-wrap id="Ch1.T3" specific-use="star"><caption><p>Continued.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="150.799606pt"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="150.799606pt"/>
     <oasis:colspec colnum="3" colname="col3" align="justify" colwidth="150.799606pt"/>
     <oasis:thead>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Problem</oasis:entry>  
         <oasis:entry colname="col2">Possible reason</oasis:entry>  
         <oasis:entry colname="col3">Solution</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">  
         <oasis:entry namest="col1" nameend="col3" align="left">Preconditioning unit issues: </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">A discharger or charger current control voltage is near maximum.</oasis:entry>  
         <oasis:entry colname="col2">A corona charger needle is dirty. The corona needle voltage is near maximum, but the charger current is still insufficient.</oasis:entry>  
         <oasis:entry colname="col3">Clean or replace the corresponding corona needle (Sect. 3.5.5).</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Charger current fluctuates or decreases rapidly.</oasis:entry>  
         <oasis:entry colname="col2">Corona charger needle is dirty.</oasis:entry>  
         <oasis:entry colname="col3"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">A discharger or charger current control voltage is near minimum.</oasis:entry>  
         <oasis:entry rowsep="1" colname="col2">Preconditioning unit cables may be incorrectly connected.</oasis:entry>  
         <oasis:entry rowsep="1" colname="col3">Check that all the plugs connect properly to the correct sockets in the preconditioning unit.</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Leakage currents due to humidity prevent correct charger current measurement.</oasis:entry>  
         <oasis:entry colname="col3">Run the instrument in dry conditions for at least 6 h.</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry namest="col1" nameend="col3" align="left">Differential mobility analyser (DMA) issues: </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">An analyzer voltage is too low.</oasis:entry>  
         <oasis:entry colname="col2">The voltages need 5–10 min to stabilize after power-on.</oasis:entry>  
         <oasis:entry colname="col3">Wait for the instrument to warm up.</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">An analyzer voltage source is broken.</oasis:entry>  
         <oasis:entry colname="col3">Disconnect the corresponding analyzer voltage plug and measure the voltage with a separate voltmeter. Contact Airel Ltd.</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">An analyzer voltage is too high.</oasis:entry>  
         <oasis:entry colname="col2">The voltage sources may drift slowly as they age and need readjustment.</oasis:entry>  
         <oasis:entry colname="col3">Contact Airel Ltd. and send the power source for the readjustment.</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry namest="col1" nameend="col3" align="left">Electrometer issues: </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">An electrometer current is missing in the electrometer signal table in Spectops screen.</oasis:entry>  
         <oasis:entry colname="col2">The electrometer is constantly saturated due to a dirty electrometer.</oasis:entry>  
         <oasis:entry colname="col3">Clean the analyzer (see Sect. 3.5.3).</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">The raw signal of an electrometer is zero in all operating modes while neighbouring electrometers show signal.</oasis:entry>  
         <oasis:entry colname="col2">The electrometer has a bad contact to the electrode.</oasis:entry>  
         <oasis:entry colname="col3">Take the electrometer out and put it back. <?xmltex \hack{\hfill\break}?> <italic>Note: Some instruments have the test peaks screwed to the analyzer and this issue is not relevant.</italic></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">The electrometer has a bad connection to the data acquisition system.</oasis:entry>  
         <oasis:entry colname="col3">Take the electrometer out, disconnect and reconnect the plug, put the electrometer back in.</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">The electrometer is broken.</oasis:entry>  
         <oasis:entry colname="col3">Replace the electrometer. <?xmltex \hack{\hfill\break}?>To confirm the issue, swap the electrometer with another in the same instrument.</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<?xmltex \hack{\addtocounter{table}{-1}}?>

<table-wrap id="Ch1.T4" specific-use="star"><caption><p>Continued.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="150.799606pt"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="150.799606pt"/>
     <oasis:colspec colnum="3" colname="col3" align="justify" colwidth="150.799606pt"/>
     <oasis:thead>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Problem</oasis:entry>  
         <oasis:entry colname="col2">Possible reason</oasis:entry>  
         <oasis:entry colname="col3">Solution</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">  
         <oasis:entry namest="col1" nameend="col3" align="left">Airflow issues: </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Instrument inlet and outlet flow are not equal.</oasis:entry>  
         <oasis:entry colname="col2">Instrument has a leak.<?xmltex \hack{\hfill\break}?> <italic>Note: Large leaks you can feel with a wet finger or use liquid leak detectors (e.g. Snoop Liquid Leak Detector, Swagelok) if leak is on overpressure side. Single, small leaks are difficult to detect.</italic></oasis:entry>  
         <oasis:entry colname="col3">Check all the tubing and connectors for a leak. If needed open the whole instrument and reconnect all parts carefully. Pay attention to the O-ring seals. <?xmltex \hack{\hfill\break}?>Also see the instructions for general “Airflow related issues”.</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">The blower is making a loud noise in the 1-blower system or the blower speed is unstable or decreasing slowly (<inline-formula><mml:math display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 100 ccm s<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in a day).</oasis:entry>  
         <oasis:entry colname="col2">The blower soon stops working as it is worn-out.</oasis:entry>  
         <oasis:entry colname="col3">Replace the blower (in the 1-blower systems); see Sect. 3.5.4.</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">A flow control voltage is near maximum.</oasis:entry>  
         <oasis:entry colname="col2">A blower is unable to provide the required flow rate or <?xmltex \hack{\hfill\break}?>a flow sensor is incorrectly connected or broken.</oasis:entry>  
         <oasis:entry colname="col3">See instructions for general “Airflow related issues”. If everything else is ok the blower may be near end of life and requires to be replaced.</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry namest="col1" nameend="col3" align="left">Software issues: </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">The particle and ion spectra are not updated to the Spectops screen.</oasis:entry>  
         <oasis:entry colname="col2">Spectops displays only the selected spectra.</oasis:entry>  
         <oasis:entry colname="col3">Click “Show latest” icon on the task bar.</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">After installing the software to a new computer, an unidentified communication error forbids the measurements.</oasis:entry>  
         <oasis:entry colname="col2">Spectops is not able to connect to the NAIS.</oasis:entry>  
         <oasis:entry colname="col3">Note that when the COM-port number has two digits, you need to add symbols <inline-formula><mml:math display="inline"><mml:mrow><mml:mo>\</mml:mo><mml:mo>\</mml:mo><mml:mo>.</mml:mo><mml:mo>\</mml:mo></mml:mrow></mml:math></inline-formula> in front of it when writing the information to a configuration file; e.g. write “<inline-formula><mml:math display="inline"><mml:mrow><mml:mo>\</mml:mo><mml:mo>\</mml:mo><mml:mo>.</mml:mo><mml:mo>\</mml:mo></mml:mrow></mml:math></inline-formula>COM12”.</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<sec id="Ch1.S5.SS1">
  <title>Direct observation of atmospheric particle formation and growth</title>
      <p>The ion spectrometer measurements performed within the EUCAARI project
(Kerminen et al., 2010; Kulmala et al., 2011) present, so far, the most
comprehensive effort to experimentally characterize nucleation and growth of
atmospheric molecular clusters and nanoparticles at ground-based observation
sites on a continental scale (Manninen et al., 2010). The atmospheric
particle formation data analysis routines for the NAIS data, e.g. estimating
the contribution of ions to particle formation, calculating the cluster ion
and aerosol particle formation and growth rates, and the ion–ion
recombination rates, is described in details in separate procedure article
(Kulmala et al., 2012).
<?xmltex \hack{\newpage}?></p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F19"><caption><p>Example of a particle size distribution measured with the NAIS in
the size range 2.5–20 nm and with the DMPS in the size range 20–1000 nm on
5 May 2007 in Hyytiälä (upper panel), and concentrations of 2–3 nm
particles measured with the NAIS, 3–6 nm particles with the DMPS, and
sulphuric acid (lower panel).</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/3577/2016/amt-9-3577-2016-f18.png"/>

        </fig>

<sec id="Ch1.S5.SS1.SSS1">
  <title>Cluster ions, intermediate ions, and large ions, i.e. charged
particles</title>
      <p>Charged particles are divided into small ions (1.3–0.5 cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> V<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>,
intermediate ions (0.5–0.034 cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> V<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>,
and large ions (0.034–0.0042 cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> V<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, which correspond
to mobility diameters of 0.8–2, 2–7 and 7–20 nm, respectively
(Hõrrak et al., 2001). As can be seen from Fig. 17, the ion number size
distribution and time series of ion concentration measured with the NAIS has
a distinct shape during new particle formation. The concentration of the
small air ions in the atmosphere is determined by competition between
production and loss processes (e.g. Israël, 1970; Hirsikko et al.,
2011). The small ions i.e. cluster ions are detected in all environmental
conditions, where they have been measured with the ion spectrometer varying
from extremely polluted areas (e.g. Backman et al., 2012; Herrmann et al.,
2014) to extremely clean environments (Virkkula et al., 2007) as well as
from the lower troposphere to the free troposphere (e.g. Manninen et al.,
2010; Mirme et al., 2010; Rose et al., 2015). The only exception where no
cluster ions were observed is when measured inside a cloud (Lihavainen et
al., 2007) or during a rapid, extreme increase in particle number
concentration (Jayaratne et al., 2015). On the other hand, the intermediate
ions are a strong indicator for the secondary aerosol formation in various
environments (Dos Santos et al., 2015; Leino et al., 2016), whereas the
large ions represent the naturally charged fraction of Aitken and
accumulation mode particles.</p>
      <p>Ionization of air molecules (e.g. N<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> and O<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> produces primary air
ions: positive ions and free electrons. The primary ions undergo rapid
chemical reactions, getting neutralized and charged again, and become small
ions in less than a second from their formation (Hõrrak, 2001). To avoid
misunderstandings, it should be noted that these primary ions are not
detected by the NAIS as their electrical mobility is too high to be
classified with the NAIS and their lifetime is too short for the detection
with the current version of the instrument.</p>
</sec>
<sec id="Ch1.S5.SS1.SSS2">
  <title>Neutral clusters and total aerosol particles</title>
      <p>The lowest detection limit for the NAIS in the particle mode is
approximately 2 nm due to overlapping corona-charger ions (Asmi et al.,
2009; Manninen et al., 2011). Thus, the NAIS is not able to detect the pool
of stable neutral clusters at sub-2 nm (Kulmala et al., 2013). The NAIS can
detect only a “shoulder” of this neutral cluster pool. The NAIS in a very
capable tool for detecting the newly formed particle already at the 2–3 nm
size range depending on the post-filter settings. As an example, the time
series of 2–3 and 3–6 nm particle concentrations on new particle formation
day are shown in Fig. 18. In the particle mode, the NAIS overestimates the
total particle number concentrations by a factor of 2–4 (Manninen et al.,
2009; Gagné et al., 2011). The quantitative agreement improves at
conditions representing particle formation bursts when higher particle
concentrations are typically observed in the overlapping size range
(nucleation mode). As seen in Fig. 19, merging particle number size
distributions measured with the NAIS (2.5–40 nm) and a differential
mobility particle sizer (DMPS, 40–1000 nm) without any additional fitting
highlights the problem at 20–40 nm range where the agreement is poor, as
the NAIS overestimates particle concentrations. Therefore, we recommend using the particle spectra measured with the NAIS up to 20 nm.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F20"><caption><p>Merging particle size distributions measured with the NAIS in the
size range 2.5–40 nm and with the DMPS in the size range 40–1000 nm on
23 April 2007 in Hyytiälä, Finland.</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/3577/2016/amt-9-3577-2016-f19.png"/>

          </fig>

</sec>
<sec id="Ch1.S5.SS1.SSS3">
  <title>Contribution of ions to aerosol processes</title>
      <p>Neutral particle formation seems to dominate over ion-induced and
ion-recombined nucleation, at least in the continental boundary layer
(Lovejoy et al., 2004; Manninen et al., 2009, 2010; Zhang et al., 2012;
Kulmala et al., 2013). The results obtained from the NAIS particle and ion
measurements agree well with separate independent measurements performed
with other electrical mobility spectrometer (e.g. Gagné et al., 2011) and condensation-based techniques (Lehtipalo et al., 2009, 2010;
Kulmala et al., 2013; Rose et al., 2015). The atmospheric ions participate
in the initial steps of the new particle formation, although their
contribution has been shown to be minor in the boundary layer (e.g. Kulmala
et al., 2013). The highest atmospheric particle formation rates are observed
at the most polluted sites, where the role of ions was the least pronounced
(Manninen et al., 2010). Furthermore, an increase of particle growth rate
with size suggests that enhancement of the growth by ions is negligible
(Yli-Juuti et al., 2011).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F21"><caption><p>Typical negative ion number size distribution measured with the ion
spectrometer in different environments and conditions: <bold>(a)</bold> no nucleation mode
particles, just cluster ions observed in Finokalia on 17 October 2008; <bold>(b)</bold> lower
edge of Aitken mode particles and cluster ions observed in Finokalia on 25 October
2008; <bold>(c)</bold> intermediate ion bursts observed during heavy rain in Finokalia
on 28 December 2008; <bold>(d)</bold> intermediate ions observed during snow storm in
Jungfraujoch on 28 November 2008; <bold>(e)</bold> undefined particle formation in Cabauw on
15 September 2008; <bold>(f)</bold> changes in air mass and particle formation in Melpitz on
3 August 2008; <bold>(g)</bold> regional particle formation in Melpitz on 13 April 2009; and <bold>(h)</bold> local
new particle formation plume in Mace Head on 16 October 2008.</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/3577/2016/amt-9-3577-2016-f20.png"/>

          </fig>

</sec>
</sec>
<sec id="Ch1.S5.SS2">
  <title>Typical number size distributions in different environments</title>
      <p>It can be noted from Fig. 20 that typical atmospheric ion and particle
distributions measured with the NAIS varies much from a regional new
particle event day to a very clean day, when the cluster ions are the most
dominant feature in the ion distribution between 0.8 and 42 nm. A closer
look at the particle formation, in Fig. 20f–h, reveals that the nucleation
bursts are usually observed during daytime and mostly starting before noon.
Based on the visual shape of the time series of the number size
distribution, several nucleation event types have been characterized
(Hirsikko et al., 2007; Manninen et al., 2010); see Fig. 20 for examples.</p>
</sec>
<sec id="Ch1.S5.SS3">
  <title>Additional value of the NAIS measurements</title>
<sec id="Ch1.S5.SS3.SSS1">
  <title>Parameterized ion and particle formation and growth processes</title>
      <p>By conducting measurements according to the work presented here, it is
possible to develop simple yet sufficiently accurate nucleation
parameterizations for large-scale atmospheric modelling. The secondary
aerosol formation includes the production of nanometer-sized clusters from
atmospheric vapours and the growth of these clusters to larger particles. One
dynamic process modifying the size distributions of neutral and charged
clusters is ion–ion recombination, which was parameterized by Kontkanen et
al. (2013). Nieminen et al. (2011) derived a parameterization for the
ion-induced nucleation or, more precisely, for the formation rate of charged
2 nm particles. In addition, it is important to predict nanoparticle growth
accurately in order to reliably estimate the atmospheric cloud condensation
nuclei concentrations. Häkkinen et al. (2013) introduced a
semi-empirical parameterization for sub-20 nm particle growth that
distributes secondary organics to the nanoparticles according to their size
and is therefore able to reproduce particle growth observed in the
atmosphere. All semi-empirical parameterizations described here are based on
extensive NAIS datasets that enable to test how well the parameterization
captures the seasonal cycle of the modelled parameters and to determine the
required weighing factors in different environments. Leppä et al. (2009)
introduced an aerosol dynamical box model, which includes basic dynamical
processes (e.g. condensation, coagulation and losses by deposition) as well
as ion–aerosol attachment and ion–ion recombination. This model was
validated and constrained against the NAIS data.</p>
</sec>
<sec id="Ch1.S5.SS3.SSS2">
  <title>Connection to atmospheric electricity parameters</title>
      <p>Small ions are almost always present in the air and are responsible for the
atmospheric electrical conductivity (e.g. Harrison and Carslaw, 2003). The
early research of air ions was mainly focused on atmospheric electricity to
study, e.g. air quality (Israël, 1970). Tammet et al. (2009) suggested
that the air ions and the atmospheric electric field controlling the
migration of ions should be considered, when discussing the formation of
primary and secondary particles. Air (polar) conductivity can be calculated
directly from the ion number size distributions measured by the NAIS, in
addition to reporting the concentration of small, intermediate, and large
ions, and the average small ion mobility.</p>
</sec>
</sec>
</sec>
<sec id="Ch1.S6" sec-type="conclusions">
  <title>Discussion and conclusions</title>
      <p>We work towards a better understanding the formation and growth mechanisms
of aerosol particles using experimental observations. The first steps to
understand the role of ions and particles in the global climate are to
understand where, when and why the nucleation mode particles are formed. The
current level of understanding the aerosol effects leads to large
uncertainties in global climate model predictions (IPCC, 2013). Thus, the
current aerosol process models need to be improved to capture the dynamics
at sub-20 nm size range. To constrain and validate these models, reliable
field observations are needed. Here we aim to provide tools to harmonize the
measurements performed with the NAIS, leading to comparable results that may
be used to increase our understanding of the aerosol and ion dynamics in the
atmosphere that can be important to various aerosol process parameterization
and to global model validation.</p>
      <p>This work is part of a protocol work done within an ACTRIS community. The
ACTRIS is an European Research Infrastructure for the observation of
Aerosol, Clouds, and Trace gases, and it aims to serve a vast community
working on models and forecast systems by offering high quality atmospheric
data. Several large-scale modelling studies have demonstrated that more
reliable nucleation parameterizations than currently available are needed to
evaluate the importance of nucleation in climate (Spracklen et al., 2006;
Makkonen et al., 2009; Merikanto et al., 2009; Pierce and Adams, 2009; Yu,
2010). Based on the NAIS results, nucleation parameterizations (e.g.
size-dependent atmospheric nanoparticle growth and nucleation favouring ion
processes) already exist for large-scale modelling but no global model is
using those (see Nieminen et al., 2011; Kontkanen et al., 2013; Häkkinen
et al., 2013). Overall, the large goal is to integrate the NAIS to various
international research networks as a standard instrument to detect the
atmospheric nanoparticles when studying climate and air quality, and to
increase the utilization of existing extensive NAIS datasets. By improving
the accuracy and comparability of the measurements and instrument laboratory
characterization, we also improve the fundamental understanding on the
atmospheric ion and aerosol population and the physical processes affecting
the population dynamics.</p>
</sec>
<sec id="Ch1.S7">
  <title>Code availability</title>
      <p>All codes necessary for a reader to understand and
evaluate the conclusions of the paper will be archived in an approved
database and made available to any user via personal communication to authors.</p>
</sec>
<sec id="Ch1.S8">
  <title>Data availability</title>
      <p>All data necessary for a reader to understand and
evaluate the conclusions of the paper are included in the paper or its
supplement or will be archived in an approved database and made available to any user via personal communication to authors. The ion number size distribution data presented in the figures
is accessible at the EMEP database (<uri>http://ebas.nilu.no</uri>).<?xmltex \hack{\newpage}?></p>
</sec>

      
      </body>
    <back><app-group>
        <supplementary-material position="anchor"><p><bold>The Supplement related to this article is available online at <inline-supplementary-material xlink:href="http://dx.doi.org/10.5194/amt-9-3577-2016-supplement" xlink:title="zip">doi:10.5194/amt-9-3577-2016-supplement</inline-supplementary-material>.</bold></p></supplementary-material>
        </app-group><notes notes-type="authorcontribution">

      <p>H. E. Manninen was primarily responsible for the design
and interpretation of the reported experiments. S. Mirme and A. Mirme
provided technical support, and T. Petäjä and M. Kulmala
administrative and supervisory support that made a direct substantial
intellectual contribution to this research. H. E. Manninen prepared the
manuscript with contributions from all co-authors.</p>
  </notes><ack><title>Acknowledgements</title><p>This work is based on the long-term experience by the University of Helsinki
(UHEL) performing field, laboratory and chamber measurements with the NAIS,
and the SOPs written by the UHEL working group for the ACTRIS community (the
European Union's FP7 capacities programme under grant no. 262254, and
Horizon 2020 research and innovation programme under grant no. 654109). We
acknowledge John Backman, Alessando Franchin, Janne Lampilahti,
Katri Leino, and Ville Vakkari for their contribution on providing
material for this SOP. UHEL acknowledges the Academy of Finland Centre of
Excellence (grant no. 272041). H. E. Manninen acknowledges support by the
Finnish Cultural Foundation (grant no. 00121082). S. Mirme and A. Mirme
acknowledge the Estonian Research Council Project (grant no. IUT20-11), the
European Regional Development Fund through the Environmental Conservation
and Environmental Technology R&amp;D Programme project BioAtmos (grant no. 3.2.0802.11-0043),
and the “Estonian Research Infrastructures Roadmap”
project Estonian Environmental Observatory (grant no. 3.2.0304.11-0395).<?xmltex \hack{\newline}?><?xmltex \hack{\newline}?>
Edited by: J. Curtius<?xmltex \hack{\newline}?>
Reviewed by: two anonymous referees</p></ack><ref-list>
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    <!--<article-title-html>How to reliably detect molecular clusters and nucleation mode particles with
Neutral cluster and Air Ion Spectrometer (NAIS)</article-title-html>
<abstract-html><p class="p">To understand the very first steps of atmospheric
particle formation and growth processes, information on the size where the
atmospheric nucleation and cluster activation occurs, is crucially needed.
The current understanding of the concentrations and dynamics of charged and
neutral clusters and particles is based on theoretical predictions and
experimental observations. This paper gives a standard operation procedure
(SOP) for Neutral cluster and Air Ion Spectrometer (NAIS) measurements and
data processing. With the NAIS data, we have improved the scientific
understanding by (1) direct detection of freshly formed atmospheric clusters
and particles, (2) linking experimental observations and theoretical
framework to understand the formation and growth mechanisms of aerosol
particles, and (3) parameterizing formation and growth mechanisms for
atmospheric models. The SOP provides tools to harmonize the world-wide
measurements of small clusters and nucleation mode particles and to verify
consistent results measured by the NAIS users. The work is based on
discussions and interactions between the NAIS users and the NAIS
manufacturer.</p></abstract-html>
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