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  <front>
    <journal-meta>
<journal-id journal-id-type="publisher">AMT</journal-id>
<journal-title-group>
<journal-title>Atmospheric Measurement Techniques</journal-title>
<abbrev-journal-title abbrev-type="publisher">AMT</abbrev-journal-title>
<abbrev-journal-title abbrev-type="nlm-ta">Atmos. Meas. Tech.</abbrev-journal-title>
</journal-title-group>
<issn pub-type="epub">1867-8548</issn>
<publisher><publisher-name>Copernicus Publications</publisher-name>
<publisher-loc>Göttingen, Germany</publisher-loc>
</publisher>
</journal-meta>

    <article-meta>
      <article-id pub-id-type="doi">10.5194/amt-9-4167-2016</article-id><title-group><article-title>Application of oxygen A-band equivalent width to disambiguate downwelling
radiances for cloud optical depth measurement</article-title>
      </title-group><?xmltex \runningtitle{Cloud optical depth measurement}?><?xmltex \runningauthor{E.~R.~Niple et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Niple</surname><given-names>Edward R.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Scott</surname><given-names>Herman E.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Conant</surname><given-names>John A.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Jones</surname><given-names>Stephen H.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Iannarilli</surname><given-names>Frank J.</given-names></name>
          <email>franki@aerodyne.com</email>
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Pereira</surname><given-names>Wellesley E.</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>Aerodyne Research, Inc., Billerica, MA, USA</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Air Force Research Lab, Albuquerque, NM,
USA</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Frank J. Iannarilli (franki@aerodyne.com)</corresp></author-notes><pub-date><day>31</day><month>August</month><year>2016</year></pub-date>
      
      <volume>9</volume>
      <issue>9</issue>
      <fpage>4167</fpage><lpage>4179</lpage>
      <history>
        <date date-type="received"><day>4</day><month>March</month><year>2016</year></date>
           <date date-type="rev-request"><day>8</day><month>March</month><year>2016</year></date>
           <date date-type="rev-recd"><day>5</day><month>July</month><year>2016</year></date>
           <date date-type="accepted"><day>12</day><month>August</month><year>2016</year></date>
      </history>
      <permissions>
<license license-type="open-access">
<license-p>This work is licensed under a Creative Commons Attribution 3.0 Unported License. To view a copy of this license, visit <ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by/3.0/">http://creativecommons.org/licenses/by/3.0/</ext-link></license-p>
</license>
</permissions><self-uri xlink:href="https://amt.copernicus.org/articles/9/4167/2016/amt-9-4167-2016.html">This article is available from https://amt.copernicus.org/articles/9/4167/2016/amt-9-4167-2016.html</self-uri>
<self-uri xlink:href="https://amt.copernicus.org/articles/9/4167/2016/amt-9-4167-2016.pdf">The full text article is available as a PDF file from https://amt.copernicus.org/articles/9/4167/2016/amt-9-4167-2016.pdf</self-uri>


      <abstract>
    <p>This paper presents the three-waveband spectrally agile technique (TWST) for
measuring cloud optical depth (COD). TWST is a portable field-proven sensor
and retrieval method offering a unique combination of fast (1 Hz)
cloud-resolving (0.5<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> field of view) real-time-reported COD
measurements. It entails ground-based measurement of visible and near-infrared
(VNIR) zenith spectral radiances much like the Aerosol Robotic Network
(AERONET) cloud-mode sensors. What is novel in our approach is that we
employ absorption in the oxygen A-band as a means of resolving the COD
ambiguity inherent in using up-looking spectral radiances. We describe the
TWST sensor and algorithm, and assess their merits by comparison to AERONET
cloud-mode measurements collected during the US Department of Energy's
Atmospheric Radiation Measurements (ARM) Two-Column Aerosol Project (TCAP).
Spectral radiance agreement was better than 1 %, while a linear fit of COD
yielded a slope of 0.905 (TWST reporting higher COD) and offset of <inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>2.1.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <title>Introduction</title>
<sec id="Ch1.S1.SS1">
  <title>Motivations and contribution</title>
      <p>Accurate global climate model (GCM) predictions are absolutely essential.
They are needed not only to help mitigate damage from unwanted climate
changes but also to determine what, if any, interventions can reverse those
changes directly. Yet clouds, because of their complexity and inherently
random nature, remain a primary challenge to GCM accuracy. Direct optical
measurements of cloud optical depth (COD) serve a number of atmospheric and
climate change science and monitoring purposes. In fundamental cloud process
and observational studies, the column-integrated nature of COD imposes a
strong calibration constraint on measurements by vertical-profiling
instruments such as lidar and cloud radar (Kikuchi et al., 2006). Localized
COD measurements serve as concise validation checks on cloud radiative
transfer (RT) models. These purposes are often cost-effectively served by
ground-based COD instruments. Globally distributed routine time series
observations of COD are similarly useful in GCM validation. Although such
observation grids are routinely available from satellite retrievals from
short-wavelength reflectances (Nakajima and King, 1990), there remains
substantial added value from ground-based COD instrument networks, such as
the Aerosol Robotic Network (AERONET) (in cloud mode). This added value is
ascribed to the continuing need for independent validation of
satellite-retrieved COD (Liu et al., 2013), since satellite sensor
calibrations degrade in orbit and suffer their own measurement biases.</p>
      <p>A further use that we have made for ground-based COD measurements is
providing ground truth for field experiments of optical contrast propagation
through clouds. In these applications we have placed emphasis on (1) fast
measurement rate, e.g., 1 Hz; (2) cloud-resolving narrow field of view (FOV)
applicable to scattered clouds as opposed to overcast-only situations; and
(3) real-time reporting. As this combination of features was to our
knowledge unavailable from existing instruments (circa 2010), we developed
the TWST sensor and its COD retrieval algorithm.</p>
      <p>COD and cloud droplet effective radius <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mi mathvariant="normal">e</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> together are the
minimal required parameters to determine a liquid water path (LWP) and thus
a connection between cloud macro-observables and microphysical parameters. To
retrieve COD and <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mi mathvariant="normal">e</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> from short-wavelength radiances, a
longstanding approach (Nakajima and King, 1990) has been to employ two
wavelengths, one at a non-absorbing (e.g., visible/NIR) and the other at an
absorbing wavelength for liquid water, e.g., longer than 1500 nm. Indeed, the
AERONET cloud mode has recently adopted a longer-wavelength channel for this
purpose (Chiu et al., 2012), and other ground-based optical sensors employ a
sufficiently broad spectral range (McBride et al., 2011; Liu et al., 2013;
Fielding et al., 2014). For the TWST sensor's present state of development,
we purposely chose not to operate beyond 1100 nm due to cost and complexity
burdens we wished to avoid. As the primary data product of TWST is COD, in Sect. 3.2.2 we provide evidence of retrieved COD's
relative insensitivity to <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mi mathvariant="normal">e</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> for low to moderate COD values.</p>
      <p>Our TWST technical approach was inspired by the development of AERONET cloud
mode, circa 2010 (prior to its employment of the 1640 nm channel), which we
summarize next.</p>
</sec>
<sec id="Ch1.S1.SS2">
  <title>Prior art of COD retrieval from zenith spectral radiance</title>
      <p>The use of zenith visible and near-infrared (VNIR) spectral radiances to measure
COD advanced with the work of Marshak et al. (2004) using a technique first
suggested by Marshak et al. (2000) and Barker and Marshak (2001). In order
to resolve the COD ambiguity, i.e., the lack of a bijective relationship
between spectral radiance and COD, they use spectral radiances at red (670 nm)
and NIR (870 nm) wavelengths which sit on opposite sides of the
chlorophyll red edge feature of the albedo of vegetated terrain. The
technique was validated at the Atmospheric Radiation Measurements (ARM) Southern Great Plains (SGP) site in
Oklahoma by comparison to more conventional techniques (Microwave Radiometer
and Multifilter Rotating Shadowband Radiometer). In the work of Chiu et
al. (2006) the preliminary validation was extended. In Chiu et al. (2010) the
technique was improved by switching to blue (440 nm) and NIR (870 nm)
wavelengths. Furthermore, it was applied to selected AERONET sensors during
what otherwise were sun-obscured sleep periods and has since become known as the
AERONET cloud mode.</p>
</sec>
<sec id="Ch1.S1.SS3">
  <title>TWST synopsis and paper outline</title>
      <p>The TWST sensor is a zenith-staring narrow-field-of-view (NFOV) VNIR
spectral radiometer built around an inexpensive commercial compact grating
spectrometer (CGS) with a nominal 2.5 nm resolution. The technological
sophistication and robustness of the TWST instrument derives almost entirely
from its commercial components; we neither depend upon nor make any
remarkable claims about sensor design or suitability. In Sect. 2, we describe the TWST sensor and its
field-worthiness; present example data; and discuss its calibration,
including dark-current correction. In Sect. 4.2.1, within our Measurements section, we
establish TWST radiometric veracity and stability by comparison to
coincident AERONET spectral radiance observations over a period of several
weeks.</p>
      <p>Although we customarily record the full spectral record spanning about
350–1000 nm, the TWST COD retrieval presently makes use of a sparse set of
spectral bins decomposed into three spectral factors: the spectral radiances at
440 and 870 nm (SR440 and SR870) and the equivalent width (EQW) of the
oxygen A-band centered near 760 nm. TWST is <italic>not</italic> using A-Band spectrometry to
retrieve a numerical COD. Like AERONET cloud mode, TWST employs
model-generated lookup tables of spectral radiance to COD. In particular,
TWST tables relate SR440 to COD. TWST differs from cloud mode in its
resolution of the aforementioned COD ambiguity. Cloud mode (circa 2010)
employs a two-dimensional ordinate space involving the sum and difference of
SR440 and SR870, which is bijective to pairing of COD and effective cloud
fraction. TWST instead first determines the cloud optical thickness regime,
thin or thick, and thus whether to reference the thin or thick branch of the
SR440 to COD lookup table. The novelty of TWST is its determination of
thickness regime from a multivariate temporal filter employing a color index
(the SR440 / SR870 ratio) and the slope of the plot of SR440 vs.  A-Band
EQW. TWST development status presently circumscribes it to the regime of
low–moderate-altitude water clouds and small–moderate solar zenith angles
(SZAs). Defining TWST's precise operational boundaries is a future task.</p>
      <p>In Sect. 3.1 we discuss the TWST COD retrieval,
including its physical basis, COD error sensitivity to primary
uncertainties, implementation details, and an explanatory example of the
retrieval technique operating on a time sequence of sensor data. In Sect. 4, in addition to the aforementioned spectral
radiance comparison, we establish TWST COD retrieval accuracy by comparing
to coincident AERONET cloud-mode COD. We present and discuss the quality of
agreement in both an illustrative several-hour time series and the
cumulative correlation over a several-week period of the Two-Column Aerosol
Project (TCAP) field campaign.</p>
</sec>
</sec>
<sec id="Ch1.S2">
  <title>The TWST sensor</title>
<sec id="Ch1.S2.SS1">
  <title>Design and characteristics</title>
      <p>The heart of the TWST sensor is a zenith-pointing calibrated
spectroradiometer. We elected to design the sensor around a commercial
CGS, given the significant advances in
miniaturization, rugged monolithic construction, and linear array detectors.
Several advantages accrue from this design choice, the most important to our
COD measurement application being the acquisition of spectral radiances at
high signal-to-noise ratio (SNR) and high temporal resolution, attributed to
the multiplex advantage provided by the CGS.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><caption><p>TWST cloud optical depth sensor specifications.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="2">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="190.633465pt"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="256.074803pt"/>
     <oasis:thead>
       <oasis:row>  
         <oasis:entry namest="col1" nameend="col2" align="center">TWST COD sensor specifications </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry namest="col1" nameend="col2" align="center">for ambient temperature range <inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>10 to  <inline-formula><mml:math display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>40 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C </oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>  
         <oasis:entry colname="col1">Weight</oasis:entry>  
         <oasis:entry colname="col2">20 lbs</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Power and communication for optical head</oasis:entry>  
         <oasis:entry colname="col2">5 Vdc, &lt; 250 mA via a single USB 2.0 cable connection to computer for power and data</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Size</oasis:entry>  
         <oasis:entry colname="col2">11 <inline-formula><mml:math display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 8 <inline-formula><mml:math display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 8 in. plus 12 in external sun baffle, or 13 <inline-formula><mml:math display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10 <inline-formula><mml:math display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 6 in. with <?xmltex \hack{\hfill\break}?>internal sun baffle</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Operating range</oasis:entry>  
         <oasis:entry colname="col2">Blue sky to COD 100</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">COD sensitivity</oasis:entry>  
         <oasis:entry colname="col2">0.001 for optically thin clouds</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Weatherproof environmental container</oasis:entry>  
         <oasis:entry colname="col2">IP66, NEMA 4X sealed enclosure with desiccant</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Data-logging rate</oasis:entry>  
         <oasis:entry colname="col2">1 Hz (typical), variable sampling interval from 0.1 to 60 s</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Field of view</oasis:entry>  
         <oasis:entry colname="col2">0.5<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Spectral range, resolution</oasis:entry>  
         <oasis:entry colname="col2">350–1000 nm, <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 2.5 nm</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Spectral bands currently used in COD retrieval</oasis:entry>  
         <oasis:entry colname="col2">440, 760, and 870 nm</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p>The key specifications for the TWST COD sensor are listed in
Table 1. Here we are excluding extreme ambient
conditions outside the range of <inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>10  to <inline-formula><mml:math display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>40 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C that require special
temperature control. The spectral resolution defined by the spectrometer
configuration is currently <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 2.5 nm (including convolution
with slit function), and the sampling interval is <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 0.3 nm. With
integral order-sorting filter, the stray light level is cited to be
&lt; 0.1 %. The temporal resolution – determined by the available
sunlight, spectrometer throughput, and linear focal plane array (FPA) detector
characteristics – is a variable sampling interval from 1 ms  to 60 s (1 s typical). A
typical TWST spectrum recorded at 1 s interval consists of 400 co-added
snapshots each of 2.5 ms integration time. The SNR for a single snapshot
is limited to <inline-formula><mml:math display="inline"><mml:mrow><mml:mn>400</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> due to photo-electron noise based on the electron well
depth of  160 000. When readout noise is included, this drops to <inline-formula><mml:math display="inline"><mml:mrow><mml:mn>275</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>. With
400 co-adds, the 1 s maximum-signal SNR is therefore about <inline-formula><mml:math display="inline"><mml:mrow><mml:mn>5500</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>.</p>
      <p>We have now built and tested a few different configurations of the TWST
sensor, but each includes the basic elements represented in the schematic
design in Fig. 1; a companion photograph looking
inside a recent model is shown in Fig. 2. The
entrance window (A) is slanted to shed rain drops. A simple mechanical
shutter (S) for recording dark spectra, selected for its reliability and
effective light blocking performance, is located just inside the input
window and driven by an inexpensive stepping motor. An incoming light baffle
(B) limits the total field of view to 0.5<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> FWHM. A collecting
lens (C) then focuses the filtered light onto the end of a 400 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>m
diameter optical fiber (D) which feeds the light into the CGS (E). The entire
system is contained in an IP66 (NEMA 4X) rated sealed enclosure with
desiccant to prevent water condensation over deployment periods of several
months. Our design has proven to be field-worthy, easily transportable, and
stable over a wide range of environmental conditions as supported in Sect. 4.2.1. We have experienced no instances of
condensation inside the sealed TWST enclosure while operating in humidity
and temperature conditions well below the dew point.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1"><caption><p>Simplified schematic of the TWST cloud optical depth sensor.</p></caption>
          <?xmltex \igopts{width=213.395669pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/4167/2016/amt-9-4167-2016-f01.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2"><caption><p>A view inside the TWST cloud optical depth sensor. See text for
labeled component descriptions.</p></caption>
          <?xmltex \igopts{width=199.169291pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/4167/2016/amt-9-4167-2016-f02.png"/>

        </fig>

</sec>
<sec id="Ch1.S2.SS2">
  <title>Example spectral data</title>
      <p>The TWST retrieval algorithm uses three spectral factors
(Fig. 3): the spectral radiances at 440  and
870 nm (SR440 and SR870) and the EQW of the oxygen A-band
(Sect. 3.3.1). Figure 3
shows example calibrated spectral measurements for nearly identical SZA, but
for clear sky and a range of COD values in the thin optical thickness
regime. The overall radiance level as well as the depth of the oxygen A-band
absorption is observed to increase with COD.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3"><caption><p>Example spectra measured by TWST sensor, delineating the three
spectral factors currently used in TWST retrieval algorithm. Spectra measured
at SZA <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 65<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> within 1 min.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/4167/2016/amt-9-4167-2016-f03.png"/>

        </fig>

</sec>
<sec id="Ch1.S2.SS3">
  <title>Calibration and dark-current correction</title>
      <p>There are two forms of calibration that must be managed for any technique
that uses spectroradiometers: wavelength and radiometric. The wavelength
calibration of the compact grating spectrometers used in our TWST sensors
has proven stable over periods of months. Furthermore, the TWST approach
does not rely on resolving spectral line structure. The 440  and 870 nm
spectral radiance levels, due to their shallow spectral slopes
(Fig. 3), and A-Band EQW value, due to its
accumulation over many spectral bins, are relatively insensitive to
foreseeable thermal shifting of the spectral sampling grid.</p>
      <p>TWST spectral radiance calibration is performed at the beginning and end of
every field deployment and more frequently as needed. Our calibration source
is a Labsphere Uniform Radiance Standard integrating sphere. It is
well known that the standard incandescent source lamps age and need to be
replaced periodically. Like other long-time users, we find these lamps to be
the largest source of uncertainty and absolute error in our radiometric
calibration procedure; that uncertainty is <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 5 %. During
each calibration we set the integration period, number of snapshot co-adds,
and aperture radiance to span the range of field conditions anticipated for
sunlit clouds, and then we derive a linear photoresponsivity coefficient in
the usual manner. These radiometric calibration records for each TWST unit
are kept and compared over periods of years to monitor the stability of each
unit for its lifetime. Having records for some units over 2–4 years, we find
changes in the calibration of 1–3 %, well within the uncertainty of our
calibration lamps, which as noted above is on the order of 5 %.</p>
      <p>The spectrometer's silicon CCD detector outputs are susceptible to offset
drift, typically driven by changes in ambient temperature, but the detector
array contains light-shielded dark-reference detectors intended to
automatically track and subtract such drift. In addition, TWST employs a
mechanical shutter for frequent collection of dark spectra, typically a
1 s dark spectrum every 60 s. The dark correction (offset
subtraction) applied to each recorded spectrum is spline-extrapolated from
earlier collected dark spectra. In Sect. 4.2.1,
the effectiveness of these calibration methods is evaluated by comparison to
coincident AERONET spectral radiance observations over a period of several
weeks.</p>
</sec>
</sec>
<sec id="Ch1.S3">
  <title>TWST cloud optical depth retrieval method</title>
<sec id="Ch1.S3.SS1">
  <title>Section outline</title>
      <p>The TWST retrieval algorithm employs model-generated lookup tables to
convert zenith spectral radiance at 440 nm (SR440) to a numerical value of
COD. However, the TWST algorithm first determines the cloud optical
thickness regime, thin or thick, and thus whether to reference the thin or
thick branch of the SR440 to COD lookup table. We first discuss the
somewhat conventional spectral radiance to numerical COD lookup, including
table generation, COD error sensitivity to principal uncertainties via
radiative transfer simulations, and technique of interpolation between table
entries. Then we discuss the determination of the optical thickness regime.
This entails discussion of why the oxygen A-band and its
EQW metric are informative of the thickness regime. We introduce the
“nose” plot of SR440 vs. EQW, and its <italic>generic</italic> slope characteristics are revealed
as a key to resolving the thin–thick ambiguity; the algorithm does
not use <italic>model-generated</italic> nose plots. We explain the need and basis for the
SR440 / SR870 ratio as color index. The color index and nose plot slope
metrics are combined in a multivariate temporal filter that continually
updates the estimate of optical thickness regime. To illustrate its
operation and how it copes with 3-D cloud effects, we discuss an example
nose plot time sequence and filtered results.</p>
</sec>
<sec id="Ch1.S3.SS2">
  <title>Numerical spectral radiance to COD lookup</title>
<sec id="Ch1.S3.SS2.SSS1">
  <title>Radiative transfer construct</title>
      <p>Assuming the sensor's FOV does not include the Sun, the
zenith spectral radiance consists of solar radiation scattered by the
molecules, aerosols, and cloud water droplets in the FOV, which may include
radiation that has been scattered multiple times from the atmosphere and the
terrain. The VNIR spectral band (Fig. 3),
at a moderate spectral resolution of 2 nm, shows a broad baseline with
multiple narrow absorption features. Many of these are due to water vapor,
as well as Fraunhofer lines. The spectral radiance at 440 nm is in a region
relatively free from atmospheric gaseous absorption and is thus suitable as a
COD proxy. We chose 440 nm for TWST radiance-to-COD lookup because that is
a wavelength used by AERONET cloud-mode sensors, which serve as a source for
comparative validation.</p>
      <p>The model used for generating 440 nm radiance-to-COD lookup tables is the
MODerate resolution atmospheric TRANsmission (MODTRAN) atmospheric radiative
transfer code (Berk et al., 2006). MODTRAN5 incorporates the Discrete
Ordinates Radiative Transfer (DISORT) code (Stamnes et al., 1988) for
plane-parallel stratified media, i.e., idealized one-dimensional radiative
transfer (1DRT). Calculations are done for a <italic>typical</italic> water stratus cloud above a
stated ground albedo, for a stated nominal aerosol profile, over a grid of
COD and SZAs. Figure 4 is a graphical depiction of sample tables. For any SZA, there is a
“bright-point” radiance where the idealized 1DRT cloud radiance reaches a maximum,
typically occurring for a COD between 2 and 8, as seen in Fig. 4. Real clouds manifest three-dimensional
radiative transfer (3DRT) effects, including radiances exceeding the
idealized 1DRT bright-point radiances (Marshak et al., 2000). When faced
with such exceedances, the TWST retrieval algorithm reports the COD
corresponding to the bright-point radiance but flags an out-of-bounds (“3-D
cloud”) condition.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4"><caption><p>440 nm radiance to COD lookup tables for various SZAs. The radiance
peak for each curve is its 1DRT “bright-point“ radiance. The black solid
and dotted line markers are referred to in various sections of the text.</p></caption>
            <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/4167/2016/amt-9-4167-2016-f04.png"/>

          </fig>

</sec>
<sec id="Ch1.S3.SS2.SSS2">
  <title>COD error sensitivity to radiative transfer parameter
uncertainties</title>
      <p>The TWST algorithm currently operates without any information on the droplet
size distribution or the cloud base height, and with a prior estimate of the
ground albedo and aerosol loading profile. We do not consider deviation of
the actual from nominal aerosol profile, as such perturbation from the
baseline aerosol optical depth (AOD) is typically a small contributor to
reported COD. We performed some initial sensitivity studies on these
remaining parameters. The albedo sensitivity findings below will prove of
value in helping to explain the minor disagreement bias between coincident
TWST and AERONET COD observations (Sect. 4.2.2).</p>
      <p>Because our implementation of the TWST algorithm uses a radiance database
generated with the MODTRAN model, we studied 440 nm radiances from four
different cloud types parameterized within MODTRAN, which assume Mie
scattering, lognormal droplet size distribution, and liquid water
refractive index. These types have effective radii of 12.0 (cumulus), 7.2 (altostratus),
8.3 (stratus), and 6.7 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>m (stratocumulus). Water cloud
drop-size distributions typically vary from an effective radius of 1–20 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>m
(see, e.g., Chiu et al., 2006). We modeled clouds with fixed base
height of 0.5 km and fixed physical thickness of 0.5 km. For each cloud type
we varied the LWP enough to achieve 550 nm CODs between
0 and 100; LWP was used because it is an input to MODTRAN. COD values were
estimated from LWP using the Wood and Hartmann (2006) modification to the
Stephens (1978) formula as described in Chiu et al. (2012).
Figure 5 shows the computed 440 nm vertical
radiances plotted vs.  LWP and COD. The different size distributions lead
to different radiances for the same LWP as expected. However, in the COD vs.
radiance plot the curves overlay closely, at least for COD <inline-formula><mml:math display="inline"><mml:mo>≤</mml:mo></mml:math></inline-formula> 20.
We verified this intuitive result using a simple standalone two-stream
computation as an alternative to the DISORT algorithm included within
MODTRAN (Stamnes et al., 1988). These results are corroborated by the more
extensive sensitivity results of McBride et al. (2011). This relative
insensitivity of COD with effective radius gives us some confidence in
reporting COD values in the face of the variety of water clouds.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5"><caption><p>Relationship between spectral radiance at 440 nm wavelength and
<bold>(a)</bold> liquid water path (LWP) and <bold>(b)</bold>  cloud optical depth,
for four different cloud types: effective radii of 12.0 (cumulus), 7.2
(altostratus), 8.3 (stratus), and 6.7 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>m (stratocumulus).</p></caption>
            <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/4167/2016/amt-9-4167-2016-f05.png"/>

          </fig>

      <p>Inter-reflections between the ground and a thick cloud can be significant
unless the Earth albedo is low. At the 440 nm lookup table wavelength most
Earth cover types have albedo of 0.2 or less as shown in Fig. 6 with samples of the
Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) database
(Baldridge et al., 2009); notable exceptions are for white sand, fresh
snow, and ocean ice. To characterize the sensitivity of retrieved COD due to
albedo uncertainty, we used MODTRAN to compute 440 nm zenith radiances for a
low-altitude stratus cloud for albedos of 0.0, 0.1, 0.2, and 0.5, over a
range of solar zeniths and cloud optical thicknesses.
Figure 7 presents a first-order indication of
sensitivity and plots 440 nm radiances vs.  COD for albedo bounds of 0.0
and 0.5. The thin–thick ambiguity, the strong variation with solar zenith,
and the weaker variation with ground albedo are evident in these plotted
results.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6"><caption><p>Spectral albedos of common Earth cover types from the ASTER
database.</p></caption>
            <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/4167/2016/amt-9-4167-2016-f06.png"/>

          </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7"><caption><p>COD vs. 440 nm spectral radiance for solar zenith angles of
10, 30, and 70<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> and for ground albedos of 0 and 50 %.</p></caption>
            <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/4167/2016/amt-9-4167-2016-f07.png"/>

          </fig>

      <p>The plot in Fig. 8a further explores this
sensitivity and shows the signed change in retrieved COD value for an
unexpected increase in the ground albedo from 0.1 (for which the
radiance-to-COD lookup tables are computed) to 0.2. Each curve, for either
thick or thin cloud, pertains to some fixed percentage of the aforementioned
1DRT bright-point radiance “Lbrt” (which varies with SZA; cf.
Fig. 4). These curves show that a higher-than-expected
albedo implies retrieval of a lower (higher) COD in the thick
(thin) regime. The largest change we found was <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>COD of 5, but that
occurred for very thick clouds, such that the relative change was only
10 %. Near the bright point (red curves in Fig. 8a) the COD vs. radiance is quite nonlinear
(Fig. 4), and thus the red curves, approximated
by linear interpolations for this study, are less precise and jagged.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8"><caption><p>Retrieved COD sensitivity to change in albedo from 0.1 to 0.2
<bold>(a)</bold> for different relative cloud radiance levels as computed using
MODTRAN and <bold>(b)</bold> as computed using asymptotic RT relations. See text
for details.</p></caption>
            <?xmltex \igopts{width=227.622047pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/4167/2016/amt-9-4167-2016-f08.png"/>

          </fig>

      <p>To provide analytic support to these albedo sensitivity findings, we
performed calculations employing asymptotic radiative transfer (ART) theory
relations as elucidated by King (1987) and Melnikova et al. (2000). Both
MODTRAN and our ART calculations compute the 440 nm radiance and optical
thickness for cloud with phase function asymmetry parameter <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>g</mml:mi><mml:mo>=</mml:mo><mml:mn>0.86</mml:mn></mml:mrow></mml:math></inline-formula> and
single-scattering albedo <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ω</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> &gt; 0.9999997 (i.e.,
conservative scattering). ART-computed sensitivities are plotted in Fig. 8b, and compare well in both trend and
magnitude against the thick regime curves of Fig. 8a, to which ART theory pertains (here COD &gt; 9). These ART
sensitivities are processed from the more directly obtained ART calculations
plotted in Fig. 9. The connection between
Figs. 9 and 8b
is depicted by the dotted path shown in Fig. 9.
The reader is directed to graphically determine the error in retrieved COD
value by first starting with a given true COD value, tracing rightward from
that <inline-formula><mml:math display="inline"><mml:mi>y</mml:mi></mml:math></inline-formula> intercept parallel to the <inline-formula><mml:math display="inline"><mml:mi>x</mml:mi></mml:math></inline-formula> axis, and reaching a curve pair for a
given SZA. The right curve of the pair registers the actual radiance
measured for the unexpected 0.2 albedo, but the left curve is
radiance-to-COD lookup table computed for the expected 0.1 albedo. So at
the intersection with the right curve, the reader traces <italic>down</italic> parallel to the <inline-formula><mml:math display="inline"><mml:mi>y</mml:mi></mml:math></inline-formula> axis to
intercept the left curve and then traces leftward back to the <inline-formula><mml:math display="inline"><mml:mi>y</mml:mi></mml:math></inline-formula> axis and reads
out the lower COD value. The solid curves of Fig. 8b are not exactly comparable to those of Fig. 8a
in that the former are for constant COD whereas the latter are for
constant relative radiance (with respect to the 1DRT bright-point radiance).
To corroborate that the COD error in fact decreases with SZA, the dashed
curves of Fig. 8b better (but not exactly)
correspond to constant relative radiance. These dashed curves have COD
decrease with decreasing SZA, which referring to
Fig. 4 yields a more stationary relative
brightness (downward-sloping line marker) than for COD constant with SZA
(horizontal line marker).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F9"><caption><p>Retrieved COD sensitivity to change in ground albedo from 0.1 (left
curves) to 0.2 (right curves) for three different SZA curve pairs, computed using
asymptotic RT relations. See text for details.</p></caption>
            <?xmltex \igopts{width=227.622047pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/4167/2016/amt-9-4167-2016-f09.png"/>

          </fig>

      <p>At this point it is important to note that the spectral radiance chosen at
some other wavelength than 440 nm could be used for the radiance-to-COD
lookup. In principle the choice of wavelength depends upon freedom from
atmospheric gaseous absorption and on the ground albedo of the measurement
site. One wants a wavelength with the lowest absolute albedo uncertainty to
minimize errors in the COD due to errors in the assumed albedo for the
MODTRAN5 computations. This flexibility in the choice of wavelength is basis
of the term “spectrally agile” within the TWST acronym.</p>
      <p>For low-altitude water clouds, uncertainty in the cloud base height has a
negligible impact on COD retrieval. We ran MODTRAN for cloud base heights of
500 m and 2 km, iterating over 10 COD and 11 solar zenith angles for each.
The 440 nm radiances were nearly identical, as shown in the scatterplot of
Fig. 10.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F10"><caption><p>Scatterplot comparing 440 nm radiance computed for cloud base
heights of 500 m and 2 km, each varying over 10 COD and 11 solar zenith
angles.</p></caption>
            <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/4167/2016/amt-9-4167-2016-f10.png"/>

          </fig>

</sec>
<sec id="Ch1.S3.SS2.SSS3">
  <title>Lookup table interpolation</title>
      <p>Various lookup table algorithms were investigated to reach a reasonable
tradeoff between accuracy and speed. The MODTRAN5 tables are preprocessed as
follows. Referring to Fig. 4, for each SZA<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi>i</mml:mi></mml:msub></mml:math></inline-formula>
entry, a cubic spline curve SR440(COD;SZA<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mi>i</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is fit to its SR440-vs-COD
table for both optical thickness regimes. A bright-point radiance vs. SZA
spline curve Lbrt(SZA), depicted by the dotted black curve in Fig. 4, is fit through the bright-point radiances
across the SZA<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi>i</mml:mi></mml:msub></mml:math></inline-formula> entries. During operation, the algorithm identifies the
tabulated SZA<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi>j</mml:mi></mml:msub></mml:math></inline-formula> closest to the current solar zenith angle SZA<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">obs</mml:mi></mml:msub></mml:math></inline-formula>.
Then a working copy of its spline curve SR440(COD;SZA<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mi>j</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is linearly
scaled in radiance so that its bright point matches Lbrt(SZA<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mi mathvariant="normal">obs</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. This
scaled curve is then used to look up the COD value for the measured SR440.</p>
</sec>
</sec>
<sec id="Ch1.S3.SS3">
  <title>Optical thickness regime determination</title>
<sec id="Ch1.S3.SS3.SSS1">
  <title>Cue from oxygen A-band equivalent width</title>
      <p>The well-known oxygen A-band centered near 760 nm (Mulliken, 1928; Wark
and Mercer, 1965) has been used for many years to study the atmosphere
from satellite and ground-based sensors. Pfeilsticker et al. (1998) first
used well-resolved A-band spectra to study the probability density function
of geometrical path lengths for skylight transmitted from clear and cloudy
skies to the ground, following the suggestion of Pfeilsticker et al. (1996)
and Harrison and Min (1997). The A-band is virtually free from absorption
by other atmospheric constituents (Pfeilsticker et al., 1998) except for
aerosol and cloud continua extinction plus a very small amount of line
absorption by water vapor (Fig. 11). Thus its
continua-normalized (Sect. 3.3.2)
spectral-average quantity, termed the equivalent width (EQW), provides a
direct measurement of the average amount of oxygen-density-weighted photon
path length from the Sun to the sensor. Since oxygen is uniformly mixed in
the atmosphere, this is related to the photons' physical path lengths.
Therefore the EQW supplies useful information about whether a zenith
radiance measurement is in the optically thin or optically thick regime. A
virtue of EQW is that it may be stably computed from low-resolution spectral
data such as from the TWST sensor, as detailed in Sect. 3.3.2.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F11"><caption><p>MODTRAN5 calculation of atmospheric transmittance for a ground-based
zenith path to space. The oxygen A-Band is virtually free of absorption by
any other species except for aerosol and cloud continua extinction. At
0.1 cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> spectral resolution, H<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O (water vapor) has a minimum
transmittance of 0.9972 across the A-band.</p></caption>
            <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/4167/2016/amt-9-4167-2016-f11.png"/>

          </fig>

      <p>Of course, other factors cause EQW to change besides COD. Changes in the SZA
produce decreases in EQW with time during the morning and increases in the
afternoon. Changes in the density-weighted average cloud thickness and cloud
altitude also affect the EQW independent of the COD.</p>
</sec>
<sec id="Ch1.S3.SS3.SSS2">
  <title>Calculation of EQW</title>
      <p>The equivalent width is computed from the spectral radiances between 750 and
785 nm by fitting a straight line to the continuum baseline from 750 to 760 and from 770 to 785 nm (Fig. 11), then dividing each
measured spectral radiance by the corresponding linear fit baseline to
produce a transmittance value, and then summing these values across the
absorption band. This calculation normalizes away the continuum
transmittance. The veracity of these calculations depends on accurate
spectrometer dark-current calibration and subtraction (discussed in Sect. 2.3). Otherwise, a dark bias of the spectral
radiance would falsely alter the computed transmittances and EQW value.</p>
</sec>
<sec id="Ch1.S3.SS3.SSS3">
  <title>“Nose” plot of SR440 vs. EQW</title>
      <p>COD is a two-valued function of up-looking spectral radiance, while oxygen
equivalent width is a monotonic function of COD for COD <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> &gt; 1. By plotting SR440 vs.  EQW as COD increases from no cloud
to thick clouds, one traces out a “nose-like” shape
(Fig. 12). For the very lowest COD values, EQW
decreases with increasing COD and the slope is negative. Beyond about
COD <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 1, the lower portion of the nose where the slope is positive
corresponds to the optically thin regime; the upper portion where the slope
is negative corresponds to the optically thick regime. Within a span of
several seconds, passing clouds most often do not trace out a complete nose
but only a small segment of it as the cloud evolves and drifts in the wind
over the sensor. Notwithstanding the lowest COD values discussed further
below, whether the cloud changes involve increases or decreases of the COD,
the slope of the corresponding segment indicates the cloud's optical
thickness regime. This is the TWST basis for resolving the COD ambiguity.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F12"><caption><p>The “nose” plot of SR440 vs. EQW, indicating a trajectory with
increasing COD. The data sample categories (colors) are described in the
text.</p></caption>
            <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/4167/2016/amt-9-4167-2016-f12.png"/>

          </fig>

      <p>The nose plot in Fig. 12 includes a smooth curve,
based on MODTRAN5 computations but elastically stretched to fit the depicted
data points over a 4 min measurement where the COD varied strongly
between the indicated blue-sky, thin, and thick regimes, and points
deviating well away from the ideal 1DRT smooth curve. These deviating points
are classified as either 3-D cloud based on their SR440 exceedance of the
1DRT bright-point radiance value (Sect. 3.2.1) or
as “mixed” points attributed to heterogeneous cloud structure within the
field of view, itself a 3DRT effect. The classification of the remaining
data points into optically thin, thick, or blue-sky regimes was corroborated
against coincident all-sky camera video. Although the MODTRAN5 computed nose
plot curve supports these regime classifications, it is important to note
that the TWST algorithm does not employ model-generated nose plot curves to
guide its thickness regime determination. Indeed, the particular shape and
slope of a computed nose plot curve varies, as it should, with the unknown
physical cloud thickness. Instead, the algorithm exploits the aforementioned
positive slope (thin) and negative slope (thick) generic properties of the nose
plot.</p><?xmltex \hack{\newpage}?>
</sec>
<sec id="Ch1.S3.SS3.SSS4">
  <title>Thickness regime filter</title>
      <p>The cloud optical thickness regime determination operates in two distinct
radiance domains. When the COD is very low, e.g., COD <inline-formula><mml:math display="inline"><mml:mo>≤</mml:mo></mml:math></inline-formula> 1, the
amount of radiation in the NIR is very small and the SNR
of the EQW is low (e.g., “clear sky” in Fig. 3), and thus the nose plot slope SNR is too
low to resolve the thickness regime. The ratio of SR440 to SR870, termed the
color index, has a much higher SNR and is more reliable in this regime.
This, of course, is a simple consequence of the wavelength dependence of
Rayleigh scattering. For low–moderate-altitude water clouds, small–moderate
SZA, and typical 440 nm ground albedos less than 0.2
(Fig. 6), our data analyses have found a hard
threshold of 4 to be a sure indicator of optically very thin clouds (e.g.,
clear sky in Fig. 3) and a soft threshold of
2 &lt; index &lt; 4 to be a strong indicator (e.g., “COD &lt; 1” in Fig. 3). When the color index is less than
2, the cloud's optical thickness is not well correlated with the index, and
the algorithm must rely on the nose plot slope.</p>
      <p>Figure 13 re-depicts the nose plot data points of
Fig. 12, this time connecting a subset of points
with line segments to indicate adjacent samples in a 2 min time series.
If measured nose plots followed an idealized 1DRT curve as indicated in Fig. 12, the determination of thickness regime
would be nearly trivial. A linear regression over a short time segment would
suffice. Clearly more complex logic is required, yet it is visually evident
that local coherence could be exploited. The qualitative reduction in
ambiguity afforded by examining a sufficient time record suggests the use of
a filter with memory. For example, for passing or evolving clouds spatially
well-resolved within a narrow field of view, the thickness regime should not
switch rapidly between thick and thin except possibly near the bright point
(thick–thin regime boundary) where a switch is inconsequential to the
retrieved COD. We implemented a time-varying hysteresis filter to
effectively avoid this unwanted switching. The hysteresis action is achieved
by keeping track of the maximum and minimum values of equivalent width over
a predetermined time interval, typically about 3 min. In order to
drive the filter toward a different thickness regime, the hysteresis limits
must be exceeded. The output of the hysteresis filter is discrete ternary:
<inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>1, 0, or 1, corresponding to thick, indeterminate, or thin. Finally, this
ternary variable is input to a linear, single-pole autoregressive (AR(1))
filter to afford additional smoothing. The output of this filter is
thresholded and used as the thickness regime estimate.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F13"><caption><p><bold>(a)</bold> Nose plot of data taken over several minutes. The
colors are described in the text. Simultaneous time plots of
<bold>(b)</bold> spectral radiance at 440 nm and <bold>(c)</bold> retrieved optical
depth corresponding to the nose plot <bold>(a)</bold>.</p></caption>
            <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/4167/2016/amt-9-4167-2016-f13.png"/>

          </fig>

</sec>
<sec id="Ch1.S3.SS3.SSS5">
  <title>Example operation of thickness regime filter</title>
      <p>Figure 13 includes time series plots of SR440 and
algorithm retrieved COD corresponding to the connected data points in the
nose plot. The dark- and medium-blue points indicate thick and thin cloud,
respectively, while light-cyan points indicate clear sky. Yellow points are for SR440
values greater than the 1DRT bright-point value and are indicative of 3-D
cloud effects. The green aforementioned mixed points (Sect. 3.3.3) were determined manually and are those
where the values deviated strongly from the overall nose curve locus; red
line segments serve to indicate where along the time series those deviations
start and end. Using an instrument with small field of view and fast
time response, we expect to see good temporal coherence in the data, and in
fact the radiance time plot shows that the cloud optical thickness regime
does not change randomly. One can see that the green-labeled points are
always transitions between thin and thick cloud which did not follow the
idealized nose curve through the bright point (at a radiance of about 23).
The EQW values of those points are reasonable, but the radiances are lower
than expected. Our supposition at this time is that some of these are due to
further 3-D cloud structure effects, but leading to darker radiances rather
than the bright radiances of the yellow points, while others points may be
due to spatial averaging over the field of view.</p><?xmltex \hack{\newpage}?>
</sec>
</sec>
</sec>
<sec id="Ch1.S4">
  <title>Measurements and comparisons to AERONET</title>
<sec id="Ch1.S4.SS1">
  <title>The Two-Column Aerosol Project</title>
      <p>TCAP was a 1-year measurement campaign directed by the ARM division of the US Department of Energy. It
was designed to quantify aerosol properties, radiation, and cloud
characteristics, producing a database to assist climate modeling studies.
The ground-based campaign involved the ARM Mobile Facility (AMF) suite of
sensors deployed at the ARM Highlands in Cape Cod, Massachusetts. The aerial
campaign involved two aircraft loaded with remote and in situ sensors.
Measurements were performed from July 2012 until June 2013.</p>
      <p>With the kind permission and assistance of the TCAP project, the TWST sensor
was set up on Cape Cod near the AERONET cloud-mode sensor and Total Sky
Imager (TSI), which are part of AMF, on 17 May 2013. Data were collected
continuously for a period of 6 days. Some minor adjustments were then made to
the sensor configuration, and then data were collected for the next 30
days until 27 June, when the AMF was taken down in preparation for its next
deployment. During this period about 50 000 spectra were collected by TWST
every day at 1 s intervals during the day.</p>
</sec>
<sec id="Ch1.S4.SS2">
  <title>AERONET cloud-mode and TWST data comparison</title>
      <p>During the time TWST was deployed on Cape Cod, AERONET collected 266 COD
values that overlapped TWST measurements. In addition,  8609 overlapping
spectral radiance values at 440 nm were collected. Since all TWST's COD
values were based on SR440 measurements, it is important to compare the
SR440 values before comparing the COD values.</p>
<sec id="Ch1.S4.SS2.SSS1">
  <title>Spectral radiance comparison</title>
      <p>This required careful time synchronization between the AERONET and TWST data
times. A linear drift of 0.27 s day<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> was determined by least squares
fits to the individual days with a 4 s difference between the high gain
(<inline-formula><mml:math display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula>8) A and low gain (<inline-formula><mml:math display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula>1) K measurements from AERONET. The result
(Fig. 14) shows that both sensors were reporting
SR440 values in very good agreement. The rms difference was 0.63
(<inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>W cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> sr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> nm<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. A simple linear fit without a constant yielded
a slope of 1.003 (0.0004). TWST values at high spectral radiance showed some
evidence of nonlinear response.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F14"><caption><p>Comparison of TWST and AERONET cloud-mode spectral radiances at
440 nm wavelength.</p></caption>
            <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/4167/2016/amt-9-4167-2016-f14.png"/>

          </fig>

      <p>Several conclusions follow from the very good agreement among TWST and
AERONET spectral radiances. The first is the expectation of a COD comparison
not influenced by TWST spectral radiance errors. As a corollary, the COD
comparison should not be unduly influenced by different fields of view
(1.2<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> for AERONET vs. 0.5<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> for TWST) and zenith pointing
(robotic control for AERONET vs. fixed tripod with bubble level for
TWST), given the close agreement over many different cloud conditions. The
sensors were laterally displaced by about 3 m, and for a 1 km cloud base
altitude their field-of-view footprints are 20 and 8 m. Of course, the
agreement only proves consistency, not accuracy, for either sensor. The
second is the radiometric stability of TWST during its TCAP deployment. This
is corroborated by the stability of the four pre- and one post-test radiometric
calibrations, with the photoresponsivity coefficient at 440 nm for 9 July
being 98.1 % of that for 17 May.</p>
</sec>
<sec id="Ch1.S4.SS2.SSS2">
  <title>COD comparison</title>
      <p>A comparison of COD values between TWST and AERONET cloud-mode must
recognize the time-sampling differences between them. For these comparisons
only the 90 s average COD was available for AERONET cloud mode, which
is a form of trimmed mean based on up to 10 instantaneous COD measurements
during each measurement period (see Chiu et al., 2010; Sect. 2.3).</p>
      <p>A time series comparison of COD is shown in Fig. 15. The agreement indicates that the TWST thickness regime filter is able
to track the rapidly changing COD. The ensemble comparison of the COD values
(Fig. 16) shows evidence of the two different
types of errors in the TWST and AERONET cloud-mode algorithms: errors in
cloud thickness regime and errors in numerical COD. To attempt a comparison,
each plot data point represents the average of the 90 instantaneous COD
measurements produced by TWST during that same 90 s period for AERONET.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F15"><caption><p>COD time series comparison between AERONET and TWST for 14 June 2013
at the ARM TCAP field campaign.</p></caption>
            <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/4167/2016/amt-9-4167-2016-f15.png"/>

          </fig>

      <p>Of the 244 overlapping COD values, 235 (96 %) showed the same cloud
thickness regime. Some analysis was done in an effort to determine whether
TWST or AERONET cloud mode was probably correct. For the nine cases where
AERONET and TWST disagreed on the thickness regime, detailed nose plots were
generated to see if we could visually extract more than the simple slope
information used in the automated algorithm. Four of the cases produced
close to the ideal nose shape, indicating that the TWST thickness regime was
probably correct. For the other five cases, the nose plot was too distorted
to determine the thickness regime, indicating that the TWST thickness regime
was probably incorrect and should have been assigned the “unknown” label.</p>
      <p>A linear fit of TWST to AERONET cloud-mode COD, for the 235 cases of
thickness regime agreement, for a fixed zero intercept, found a slope of 0.843
(TWST reporting higher COD values) with an rms difference of COD 3.2. This
was repeated while dropping the two high COD value outlier points
(Fig. 16), but the slope only changed by 1 %.
No evidence of a constant offset between TWST and AERONET cloud mode was
found. However, the sparsity of such evidence is due to the relatively few
optically thin COD cases available from AERONET, due to the secondary
mission status of its cloud mode. (When skies are largely clear, AERONET
executes its primary mission of aerosol optical depth and microphysical
property retrieval measurements.) Therefore, another linear fit, this time
with a free intercept, found a slope of 0.905 and constant offset of <inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>2.1.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F16"><caption><p>Comparison of TWST and AERONET cloud-mode cloud optical depths.</p></caption>
            <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://amt.copernicus.org/articles/9/4167/2016/amt-9-4167-2016-f16.png"/>

          </fig>

      <p>The two primary candidates for causing the observed disagreements are
differences in the TWST and AERONET cloud-mode lookup tables and effects
from the trimmed mean process. There may also be some residual effects due
to FOV and pointing differences, although these are not expected to be large
due to the very good spectral radiance agreement (Sect. 4.2.1). A partial explanation centering on the
lookup tables is the difference in assumed ground albedos between the
sensors. The TWST SR440-to-COD lookup table generated from MODTRAN used a
weighted average of water, deciduous vegetation, dead pine, and sand
albedos, resulting in an Earth albedo at 440 nm of 0.078545. On the other
hand, AERONET updates its ground albedo episodically every few days from
MODIS data products or a (rolling) 16-day average MODIS historical database
(Chiu et al., 2012). For this dataset, the AERONET-employed albedos were
lower than that assumed for TWST, varying between 0.02 and 0.04, with an average of 0.03.
Most of the sample points are in the optically thick regime, and according
to our albedo sensitivity discussion (Sect. 3.2.2), a <italic>lower</italic>-than-expected albedo implies TWST
retrieval of <italic>higher</italic> COD values in the thick regime, consistent with the linear
fits. Figure 8 depicts an approximately constant
relative COD retrieval error of about 10 % per 0.1 albedo increment. The
0.05 average difference in assumed albedo therefore explains about half
(0.05) of the difference between a slope of unity and the fitted slope
(0.905).</p>
      <p>It must always be kept in mind that the COD values determined by TWST and
AERONET cloud mode are only equivalent 1DRT quantities. Violations of 1-D
assumptions are present in nearly all our measurements to some extent. This
includes (1) cases where the observed spectral radiance is greater than that
possible for any 1-D cloud, (2)  cases where deviations from the ideal nose
plot are too high for any 1-D cloud, and (3) the many cases where the rapid
variation in spectral radiance is too high for 1-D clouds.</p>
</sec>
</sec>
</sec>
<sec id="Ch1.S5" sec-type="conclusions">
  <title>Conclusions</title>
      <p>Overall the good agreement between TWST and AERONET cloud-mode cloud optical
depth values, across many weeks of coincident field deployment, validates
the performance of the three-waveband spectrally agile technique as well as
the field-worthiness of the TWST sensor. Although the spectrally agile
nature of TWST was not investigated in this study, its advantage over fixed
spectral bands for cases with high albedo at 440 nm may be the focus of a
future study. Although our error sensitivity studies in Sect. 3.2.2 and the agreement with AERONET over many
weeks of the TCAP campaign lend confidence in applying TWST for nominal
conditions, future efforts will ascertain and, where possible, extend the
operational limits (e.g., SZA, ground albedo) of the TWST retrieval
algorithm.</p>
      <p>One of the most notable results of our experience with TWST is the high
signal-to-noise ratio available in the high temporal (1 s), spatial
(0.5<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> field of view), and spectral (2.5 nm) resolution data TWST
generates. At peak signal, at a COD value of approximately 5, the SNR is
estimated to be <inline-formula><mml:math display="inline"><mml:mrow><mml:mn>5000</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> for 1 Hz reports.</p>
</sec>
<sec id="Ch1.S6">
  <title>Data availability</title>
      <p>AERONET cloud-mode data
from the DOE ARM TCAP campaign (ARM_Highlands_MA site, 2013) are available
on a restricted basis, due to the research and development phase
characterizing AERONET cloud mode, from
<uri>http://aeronet.gsfc.nasa.gov/cgi-bin/type_piece_of_map_cloud</uri>. For similar reasons, TWST data from TCAP are not presently available
from the ARM data archive.</p>
</sec>

      
      </body>
    <back><ack><title>Acknowledgements</title><p>The authors thank Christine Chiu of the University of Reading, UK, for help in
understanding the AERONET cloud-mode algorithm, Brent Holben and the AERONET
team at NASA Goddard, Laurie Gregory and Richard Wagener of Brookhaven
National Lab, and Ilya Slutsker of Sigma Space Corp. for details on the
particular AERONET sensor used at TCAP, as well as the TCAP PI Larry Berg of
PNNL and Paul Ortega of LANL for permission to participate in TCAP, MAGIC PI
Ernie Lewis of Brookhaven National Lab for the idea of a TWST deployment at
TCAP, and Vaughan Ivens for invaluable assistance on site at Cape Cod. Data
were obtained from the Atmospheric Radiation Measurement (ARM)
Climate Research Facility sponsored by the US Department of Energy, Office
of Science, Office of Biological and Environmental Research, Climate and
Environment Sciences Division. The Cimel Sun-photometer data were collected
by the US Department of Energy as part of the ARM Climate Research Facility and processed by the
National Aeronautics and Space Administration's Aerosol Robotic Network
(AERONET).<?xmltex \hack{\newline}?><?xmltex \hack{\newline}?>
Edited by: A. Sayer<?xmltex \hack{\newline}?>
Reviewed by: three anonymous referees</p></ack><ref-list>
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    </app></app-group></back>
    <!--<article-title-html>Application of oxygen A-band equivalent width to disambiguate downwelling
radiances for cloud optical depth measurement</article-title-html>
<abstract-html><p class="p">This paper presents the three-waveband spectrally agile technique (TWST) for
measuring cloud optical depth (COD). TWST is a portable field-proven sensor
and retrieval method offering a unique combination of fast (1 Hz)
cloud-resolving (0.5° field of view) real-time-reported COD
measurements. It entails ground-based measurement of visible and near-infrared
(VNIR) zenith spectral radiances much like the Aerosol Robotic Network
(AERONET) cloud-mode sensors. What is novel in our approach is that we
employ absorption in the oxygen A-band as a means of resolving the COD
ambiguity inherent in using up-looking spectral radiances. We describe the
TWST sensor and algorithm, and assess their merits by comparison to AERONET
cloud-mode measurements collected during the US Department of Energy's
Atmospheric Radiation Measurements (ARM) Two-Column Aerosol Project (TCAP).
Spectral radiance agreement was better than 1 %, while a linear fit of COD
yielded a slope of 0.905 (TWST reporting higher COD) and offset of −2.1.</p></abstract-html>
<ref-html id="bib1.bib1"><label>1</label><mixed-citation>
Baldridge, A. M., Hook, S. J., Grove, C. I., and Rivera, G.: The ASTER
Spectral Library Version 2.0., Remote Sens. Environ., 113, 711–715, 2009.
</mixed-citation></ref-html>
<ref-html id="bib1.bib2"><label>2</label><mixed-citation>
Barker, H. W.  and Marshak, A.: Inferring optical depth of broken clouds
above green vegetation using surface solar radiometric measurements, J.
Atmos. Sci., 58, 2989–3006, 2001.
</mixed-citation></ref-html>
<ref-html id="bib1.bib3"><label>3</label><mixed-citation>
Berk, A., Anderson, G. P., Acharya, P. K., Bernstein, L. S., Muratov, L.,
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