Molecular characterization of alkyl nitrates in atmospheric aerosols by ion mobility mass spectrometry
- 1Atmospheric Chemistry Observation & Modeling Laboratory, National Center for Atmospheric Research, Boulder, CO 80301, USA
- 2Department of Chemistry, University of California, Riverside, CA 92521, USA
- 3Environmental Toxicology Program, University of California, Riverside, CA 92521, USA
- 4Center for Aerosol and Cloud Chemistry, Aerodyne Research, Inc., Billerica, MA 01821, USA
- 5Department of Atmospheric Sciences, Texas A&M University, College Station, TX 77843, USA
Correspondence: Xuan Zhang (firstname.lastname@example.org) and Manjula R. Canagaratna (email@example.com)
We demonstrate the capability of the ion mobility mass spectrometry (IMS-MS) for molecular characterization of reactive and short-lived alkyl nitrates (ANs) in atmospheric aerosols. We show significantly enhanced sensitivity towards the intact molecules of ANs by ultimately 2 orders of magnitude with the addition of inorganic anions such as chloride and nitrate to the negative electrospray to promote the ion adduct formation. This approach enables the measurement of ANs that have a low tendency to form molecular ions on their own with an improved limit of detection in the range of 0.1 to 4.3 µM. Molecular identities of the ANs are well constrained by the developed correlation between the collision cross section and mass-to-charge ratio, which provides a two-dimensional separation of the -ONO2-containing compounds on the basis of their molecular size and geometry. Structural information of the nitrate molecules is further probed by the identification of characteristic fragments produced from the collision-induced dissociation of parent AN adducts. Application of the IMS-MS technique is exemplified by the identification of hydroxy nitrates in secondary organic aerosols produced from the photochemical oxidation of isoprene.
Alkyl nitrates (ANs; ANs are RONO2) constitute a major fraction and serve as a temporary reservoir of total reactive nitrogen oxides in the atmosphere (Perring et al., 2013). ANs are primarily produced from the OH-initiated oxidation of volatile organic compounds (VOCs) in the presence of nitrogen oxides (NOx) during daytime and the NO3-initiated oxidation of alkenes during nighttime. Once formed, ANs are primarily subjected to further chemical transformation, leading to the recycling of NOx, partitioning into the particle-phase-forming secondary organic aerosols (SOAs) or deposition resulting in the loss of atmospheric NOx. Characterization of alkyl nitrates is of crucial importance in understanding the regional NOx budget, tropospheric ozone production and chemical mechanisms leading to the SOA formation (Brown et al., 2009; Farmer et al., 2011; Rollins et al., 2012; Rosen et al., 2004).
A suite of analytical techniques, such as thermal-dissociation laser-induced-fluorescence spectroscopy (TD-LIF; Thornton et al., 2000; Day et al., 2002; Wooldridge et al., 2010), chemical ionization mass spectrometry (CIMS; Beaver et al., 2012; Loza et al., 2014; Krechmer et al., 2015; Nguyen et al., 2015; Schwantes et al., 2015, 2017b; Teng et al., 2015; Xiong et al., 2015; Lambe et al., 2017) and gas chromatography coupled with electron capture detection (GC-ECD; Atlas, 1988; O'Brien et al., 1995; He et al., 2011), have been employed for in situ measurement of total and individual ANs in the gas phase. Observations of ANs in the particle phase, however, are rather limited due to the intensive denitrification during the preparation and analysis of particle samples. Efforts have been made to characterize the total amount of ANs and the number of -ONO2 functional groups using TD-LIF and Fourier-transform infrared spectroscopy (FTIR; Rollins et al., 2010; Russell et al., 2011). The ratio derived from the aerosol mass spectrometry (AMS) measurements has also been used as an indicator for the presence of alkyl nitrates in submicrometer particles (Farmer et al., 2010; Kiendler-Scharr et al., 2016; Xu et al., 2017, 2018). These techniques have provided important insights into the prevalence and abundance of ANs in atmospheric aerosols, although the molecular information of individual ANs is lacking. Recent development on the filter inlet for gases and aerosols (FIGAERO) interfaced with the CIMS instrument has allowed for online speciation and quantification of functionalized alkyl nitrates in the particle phase (Lee et al., 2016). While the molecular composition of any given compounds can be inferred from the mass spectra, structural information on isomeric and isobaric species that are commonly produced from atmospheric chemical transformation is not available from CIMS measurements.
In this study, we present the first demonstration of the ion mobility mass spectrometry (IMS-MS) interfaced with an electrospray ionization (ESI) source that enables the molecular characterization of alkyl nitrates in atmospheric aerosols. The IMS technique has been widely employed in the fields of biochemistry and homeland security. The majority of previous studies that adapted ESI for IMS analysis employed either the desorption electrospray ionization (DESI) to detect trace amounts of ANs on ambient surfaces (Cotte-Rodríguez et al., 2005; Popov et al., 2005; Takáts et al., 2005; Justes et al., 2007) or the secondary electrospray ionization (SESI) for gas-phase AN measurements (Tam and Hill, 2004; Martínez-Lozano et al., 2009; Crawford and Hill, 2013). The analysis of ANs directly from liquid solutions, on the other hand, has not yet been widely explored. Hilton et al. (2010) found that the fragment dominates the IMS spectra of several types of ANs measured in the negative ESI, suggesting that these nitrate molecules readily fragment due to the thermally labile nature of the -ONO2 functionality, thereby resulting in the loss of molecular information of the targeted compounds. Here we show that with the addition of selected anions, including chloride, nitrate, iodide and acetate, into the sprayed solution, molecular structures of ANs are largely maintained by producing ion clusters of the form [M+Cl]−, [M+NO3]−, [M+I]− and [M+Ac]−, respectively. The anion attachment represents a new option for the detection of the -ONO2 functionality that is unlikely to produce a measurable amount of molecular ions on its own during ESI. The optimal anion concentration to essentially promote the ion adduct formation is on the order of millimoles, which is significantly higher than the level of concentrations naturally present in ambient aerosols. We develop an intrinsic correlation between the collision cross section and mass-to-charge ratio based on the ion mobility measurements of five AN standards, providing a two-dimensional identification of unknown molecules that are likely containing the -ONO2 moiety. Additionally, the molecular identity of ANs can be verified via the characteristic fragment produced from the collision-induced dissociation of the parent ion adducts. We apply the IMS-MS technique to identify ANs in SOA produced from isoprene photochemistry.
Organic nitrate and nitro standards stored in acetonitrile ampules, including 1-mononitroglycerin (100 µg mL−1, Sigma-Aldrich), 1,3-dinitroglycerin (100 µg mL−1, Sigma-Aldrich), pentaerythritol tetranitrate (1000 µg mL−1, Sigma-Aldrich), hexahydro-1,3,5-trinitro-1,3,5-triazine (1000 µg mL−1, Sigma-Aldrich) and 2,4-dinitrotoluene (1000 µg mL−1, Sigma-Aldrich), were further diluted with methanol (HPLC grade; J. T. Baker) to 5 µM or less for characterizing the performance of the ion mobility mass spectrometer. Stock solutions of ammonium acetate (>99 %, Sigma-Aldrich), ammonium chloride (>99 %, Sigma-Aldrich), sodium nitrate (>99 %, Sigma-Aldrich) and sodium iodide (>99 %, Sigma-Aldrich) were prepared at a concentration of 10 mM in methanol. They were used as additives at typical concentrations of 0.01–0.1 mM in the AN methanol solutions to promote the ion adduct formation.
SOA samples containing alkyl nitrates were generated from the OH oxidation of isoprene under high-NOx conditions in the NCAR 10 m3 Atmospheric Simulation Chamber (Zhang et al., 2018). H2O2 was used as the OH source by evaporating a 133 µL aqueous solution (30 wt % in water; Sigma-Aldrich) into the chamber with 5 L min−1 purified air for ∼120 min, resulting in a starting concentration of ∼4 ppm (Wang et al., 2009; He et al., 2010; Zhao et al., 2011; Cappa et al., 2013; Zhang and Seinfeld, 2013; Schwantes et al., 2017a). Isoprene was injected into the chamber by evaporating a ∼17 µL liquid standard (≥99 %, Sigma-Aldrich) with 5 L min−1 purified air for ∼20 min, resulting an initial concentration of ∼500 ppb. NO was injected into the chamber from a concentrated NO cylinder source (NO = 133.16 ppm, balance N2) to achieve an initial concentration of ∼500 ppb. Seed aerosol was injected into the chamber by atomizing 0.06 M aqueous ammonium-sulfate solution to provide a sufficient surface area for the partitioning of alkyl nitrates (Nguyen et al., 2014a, b; Zhang et al., 2014a, 2015b; McVay et al., 2016; Nah et al., 2016; Huang et al., 2018). The chamber contents were allowed to mix for ∼30 min before the onset of irradiation. After ∼2 h photooxidation, NO was nearly depleted (>5 ppb) and the irradiation was ceased. The SOA produced was then collected on Teflon filters (47 mm diameter, 0.5 µM pore size; Millipore) through active sampling at a flow rate of 10 L min−1 for ∼3 h (Schilling Fahnestock et al., 2014; Zhang et al., 2014b; Huang et al., 2016; Thomas et al., 2016). Filters were stored in a −20 ∘C freezer prior to analysis (Riva et al., 2016). SOA samples were extracted in 20 mL HPLC-grade methanol by 45 min of sonication at ∼273 K and then concentrated to ∼5 mL with the assistance of a ∼2 L min−1 N2 stream.
The electrospray ionization drift-tube ion mobility spectrometer (DT-IMS) interfaced to a time-of-flight mass spectrometer (TOFMS) was utilized in the characterization of ANs. The instrument was designed and manufactured by Tofwerk (AG, Switzerland), with detailed descriptions and schematics provided by previous studies (Kaplan et al., 2010; Groessl et al., 2015; Krechmer et al., 2016; Zhang et al., 2016b, 2017). Here we will present the instrument operation protocols specific to the AN measurement.
AN standards and SOA filter extracts were delivered to the ESI source via a 250 µL gas-tight syringe (Hamilton) held on a syringe pump (Harvard Apparatus) at a flow rate of 1 µL min−1. The optimal ESI potential to readily generate stable ion adducts while minimizing the corona discharge was found to be −1800 V. The negatively charged mist generated at the emitter tip is introduced into the drift tube through a Bradbury–Nielson (BN) ion gate located at the entrance with the assistance of 1 L min−1 nitrogen sheath gas. The BN ion gate was operated at the Hadamard transform mode, with a closure voltage of 50 V and a gate pulse frequency of 1.2×103 Hz. The drift tube was held at a constant temperature (340±3 K) and atmospheric pressure (∼766 Torr). A counter flow of N2 drift gas was introduced at the end of the drift region at a flow rate of 1.2 mL min−1. Ion mobility separation was carried out at a field strength ranging from 300 to 400 V cm−1. After exiting from the drift tube, ions were focused into a pressure–vacuum interface that includes two segmented quadrupoles (Q1 and Q2) through an ion lens and a nozzle. Note that the potential gradient applied to the ion lens and nozzle should be limited to 500 V or less to prevent intensive fragmentation of the molecular ions. The frequency and amplitude were set as 1.5×106 Hz and 196 V for Q1 and 1.5×106 Hz and 250 V for Q2. Collision-induced dissociation (CID) can be performed by adjusting the voltages on the ion optical elements between the two quadruple stages. Over the course of a CID program, the quadrupoles were set to 1.3×106 Hz and 120 V for Q1 and 1.2×106 Hz and 150 V for Q2 to ensure good transmission of low masses ().
The ESI IMS TOFMS instrument was operated in the m∕z range of 20 to 1500, with a total recording time of 60 s for each dataset. The mass spectrometer was calibrated using sodium nitrate, ammonium phosphate, sodium dodecyl sulfate, sodium taurocholate hydrate and Ultramark 1621 in the negative mode. The ion mobility measurements were calibrated using tetrabutyl ammonium chloride as the instrument standard and 2,4-lutidine as the mobility standard (Zhang et al., 2016b). The average IMS (t∕dt50) and MS (m∕dm50) resolving powers are ∼80 and ∼4000, respectively. Mass spectra and ion mobility spectra were collected by Aquility DAQ v2.1.0 and post-processed by Tofware v2.5.3.
3.1 Ion adduct formation
The strong electron affinity of the -ONO2 functional group makes alkyl nitrate a potential candidate for being analyzed in the ESI(−) negative electrospray ionization mode. However, the ESI(−) mass spectra of the AN standards investigated here are typically characterized by various fragments and clusters due principally to the thermally labile -ONO2 moiety. As shown in Fig. 1, no molecular ion ([M]− or [M−H]−) is observed in the ESI(−) mass spectra of 1-mononitroglycerin (MNG), 1,3-dinitroglycerin (DNG) and pentaerythritol tetranitrate (PETN). Instead, a small peak appears as a cluster ion of the form −. It is worth noting that the addition of water to the mobile phase does not promote the molecular ion formation; rather significant nitrate losses via hydrolysis were observed. With the addition of trace amount of salts, i.e., ammonium chloride (NH4Cl), sodium nitrate (NaNO3), sodium iodide (NaI) and ammonium acetate (NH4Ac), the overall signal intensities were significantly enhanced through the production of a suite of adduct ions of the form [M+Cl]−, [M+NO3]−, [M+I]− and [M+Ac]−, respectively. The relative sensitivities of individual adduct ions increase by ultimately 2 orders of magnitude compared with the pure standard in a methanol solution. Here the observed ion adduct formation in ESI can be considered to be a special case of chemical ionization occurring in the solution before the charge separation process takes place.
a The limit of detection (LOD) is calculated as LOD = , where S∕N is the signal-to-noise ratio, which is taken as 3 here, k is the response factor of IMS-MS towards individual ion adducts produced from 5 µM standard nitrate solution during negative ESI and σ is the standard deviation of the IMS-MS response over the course of 60 s measurements. b The collision cross section () is calculated through the modified zero field (so called Mason–Schamp) equation; see more details in Zhang et al. (2016b).
Table 1 lists the characteristic adduct ions formed from three AN standards (MNG, DNG and PETN) in a methanol solution with selected additives (NH4Ac, NH4Cl, NaI and NaNO3). Ion adducts are systematically observed from all of the ANs investigated regardless of the number of -ONO2 functional groups attached to the molecule. Nitrate () and chloride (Cl−) anions were found to be the most effective additives for promoting ion adduct formation. Nitrate clusters exhibit the highest signal intensity and lowest limit of detection, especially for the poly-nitrates and functionalized alkyl nitrates investigated. Chloride clusters are characterized by two distinct ions with a mass difference of 2 amu and abundance ratio of 3:1 due to the natural presence of isotopes 35Cl and 37Cl. Also given in Table 1 are the detected negative ions from two organic nitro-compounds, i.e., hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) and 2,4-dinitrotoluene (DNT). In contrast to RDX, which undergoes intensive clustering processes with Cl−, I− and during negative ESI, one dominant molecular ion ([M−H]−) was observed in the ESI(−) mass spectra of DNT. The limits of detection (LODs) towards the nitrate adducts are in the range of 0.1 to 4.3 µM (see Table 1), demonstrating an improved performance of the IMS-MS technique employed here compared with literature data obtained from sprayed solutions (Asbury et al., 2000; Hilton et al., 2010). For example, the LODs for DNT and RDX are 26 and 40 µg L−1, respectively, in Asbury et al. (2000), and the LOD for urea nitrate is 2.5 mg L−1 in Hilton et al. (2010).
The effect of the additive concentrations ( and Cl−) on the ion adduct formation was investigated using an equimolar mixture (5 µM each) of PETN and RDX as a representative of nitrates and nitro-compounds, respectively, in a methanol solution (Fig. 2). In the absence of any additives, the presence of background anions from either impurities in the solvent or thermal decomposition of alkyl nitrates leads to a detectable amount of ion adducts. With the anion levels on the order of micromoles, ion adducts become dominant in the ESI(−) mass spectra. The optimal anion concentration was found to be in the range of 0.01 to 0.1 mM. Progressively rising anion concentrations (>1 mM) essentially suppress adduct formation due to the competition for limited resources, such as space and charge (Cech and Enke, 2001). Note that the measured drift time for each ion adduct is constant at anion concentrations ranging from 1 µM to 1 mM, indicative of the absence of ion–molecule clustering in the IMS drift tube.
3.2 Trend line of collision cross section vs. mass-to-charge ratio
The collision cross section () represents the effective area for interactions between a charged molecule and the surrounding buffer gases (e.g., N2 herein). It is derived from the mobility measurement in the IMS drift tube, where ions with open conformation undergo more collisions with buffer gas molecules and hence travel more slowly than the compact ones (Shvartsburg et al., 2000). The measured for organic nitrates and nitro-compounds given in Table 1 is in good agreement with previous reported values obtained from experiments where the analytes were introduced into the IMS system from the vapor phase (Kaur-Atwal et al., 2009; Kozole et al., 2015). Combination of the collision cross section with molecular mass (as denoted by mass-to-charge ratio, m∕z) provides a two-dimensional space for separation of species based on their size as well as geometry. We have shown that species of the same chemical class (e.g., amines, alcohols and carboxylic acids) tend to situate as a narrow band and follow a unique trend line on the 2-D space (Zhang et al., 2016b). Here we demonstrate the presence of a –m∕z trend line for alkyl nitrates. Figure 3 shows that the measured of the AN adducts, regardless of the AN molecular structures and types of anions that promote the adduct formation, appears along the –m∕z trend line predicted by the core model (deviations less than 5.2 %). Also shown here are the predicted –m∕z trend lines for mono-carboxylic or multi-carboxylic acids and organic sulfates, which readily produce molecular ions via deprotonation ([M−H]−) during negative ESI. Alkyl nitrates can be distinguished from carboxylic acids and sulfates based on their distinct relationship of collision cross sections to the mass-to-charge ratio. Note that other important chemical classes of atmospheric interest, such as amines, alcohols, aldehydes and peroxides, are suitable for analysis in the positive ESI, and their trend lines are not given here.
3.3 Characteristic fragments upon collision-induced dissociation
Molecular structures of selected AN ion adducts were further probed with the assistance of the CID analysis, which was performed after the drift tube but prior to the time-of-flight chamber. The resulting daughter ion appears at the same drift time as the parent ion, allowing for a straightforward correlation of any given ion with its fragments. As shown in Fig. 4, the nitrate ion () at m∕z 62 is exclusively observed upon CID of the parent ion adducts formed from MNG, DNG and PETN by clustering with Cl−, and Ac−. The fragment resulting from decomposition of the corresponding parent ion adduct can be well separated from that originally added to the AN solution based on their entirely different ion mobilities (as reflected by the measured drift time). Thus is considered to be a characteristic fragment upon CID of the parent AN adduct ion and serves as a tracer to verify the presence of the -ONO2 functional group in unknown compounds.
The anions (Cl−, and Ac−) that promote the clustering chemistry were not observed upon CID of the parent AN adducts. Figure 5 shows the profiles of four ion adducts, i.e., [MNG+Cl]−, [MNG+Ac]−, [PETN+Cl]− and [PETN+I]−, as well as their resulting fragments under a sequence of the CID potential gradient. As expected, the abundance of the transmitted parent ion adducts decreases as the CID voltage rises. appears as the largest product ion, and its enhanced abundance with increasing CID voltage is balanced by the decrease in signals of the corresponding parent ion adduct. Cl− and Ac− remain minor peaks over the entire range of the displayed CID potential gradient. Under low-energy collisions, the parent AN ion adduct principally follows two fragmentation pathways, leading to with the neutral AN molecule or the deprotonated AN molecular ion ([M−H]−) via the neutral loss of . The absence of Cl− and Ac− indicates higher gas-phase basicity of than [M−H]−. As a result, the mechanism yielding [M−H]− is the dominant fragmentation pathway of AN ion adducts (with the exception of [PETN+I]−). The resulting molecular ion [M−H]− decomposes promptly to due to the presence of the fragile R-ONO2 bond.
3.4 Application to isoprene SOA
The OH-initiated oxidation of isoprene produces a population of isoprene peroxy radicals (RO2), the fate of which depends on the level of nitric oxide. Under high-NO conditions as performed in the chamber experiments here, RO2 radicals preferentially react with NO, leading to major first-generation products including isoprene hydroxy nitrates, among which the two β-hydroxy nitrates dominate the isomer distribution. Due to the presence of a double bond, the hydroxy nitrate could undergo OH addition followed again by reactions of RO2 radicals with NO, leading to a spectrum of products, of which some highly functionalized molecules such as the dihydroxy dinitrate are potential SOA precursors (Wennberg et al., 2018).
A pair of ion adducts at m∕z 261 ([M+35Cl]−) and m∕z 263 ([M+37Cl]−) with the abundance ratio of 3:1 is observed in the mass spectra of the isoprene SOA extracts in methanol with 0.2 mM sodium chloride as the additive. These two adducts share an identical mobility (DT = ∼25.8 ms), which also appears as a small peak (DT = ∼25.7 ms) in the mobility spectra of the ion (Fig. 6c). Further inspection of the “mobility-selected” mass spectra of the parent ion adduct at m∕z 261 reveals that is the major fragment ion (Fig. 6a). With the application of a CID potential sequence, the intensity of the precursor ion at m∕z 261 decreases and that of the fragment ion at m∕z 62 increases (Fig. 6b), a similar pattern to that observed for the AN standards. We thereby tentatively assign the parent ion adduct at m∕z 261 to a second-generation oxidation product, dihydroxy dinitrate (C5H10O8N2; see the chemical structure given in Fig. 6), which is produced from the addition of OH to the two double bonds of isoprene followed by RO2+NO reactions. It is interesting to note that a small shoulder peak appears at ∼26.0 ms in the mobility spectra of the ion adduct at m∕z 261 (Fig. 6c), likely representative of the C5H10O8N2 isomers generated from the much less favored OH-addition channels that produce primary RO2 radicals. Quantitative analysis of the dihydroxy dinitrate is complicated by the matrix interference during the ESI process, and chromatographic separation prior to infusion to the ESI source is required (Zhang et al., 2015a, 2016a), which is beyond the capability of the current instrument setup. Also note that first-generation hydroxy nitrates were not detected due to their relatively high volatility and thus quite limited partitioning onto the particle phase. On the other hand, multiple peaks were observed in the mobility spectra of the ion (Fig. 6c), and their drift times are higher than that of the ion assigned to the dihydroxy dinitrate, implying that some high-molecular-weight nitrate products were likely fragmented in the quadrupole interface.
The anion attachment chemistry was previously used in the negative ESI operation to effectively induce ion formation from neutral molecules that lack acidic sites (Zhu and Cole, 2000). Here we build on the use of anion attachment, a special chemical ionization mechanism in the solution, to characterize the condensed-phase alkyl nitrates at the molecular level. The propensity of the -ONO2 moiety to cluster with a diverse selection of anions, including Cl−, I−, and Ac−, was observed during the negative electrospray ionization process, and the measured total ion signals were enhanced by ultimately 2 orders of magnitude. Compared with conventional mass spectrometric techniques, the coupled ion mobility and mass-to-charge-ratio measurements provide a two-dimensional separation of alkyl nitrates from other chemical classes commonly detected in negative ESI, such as organic sulfates and carboxylic acids. With the assistance of the collision-induced dissociation analysis, upon which the resulting product ions share the identical drift time as the precursor ion, molecular structures of ANs can be further probed. Regardless of the types of anions attached to the AN molecules, dissociation of the parent adduct ion yields a characteristic fragment, at m∕z 62, which can be used to verify the presence of the -ONO2 functional group in any given molecule. These new features enable the unambiguous identification of alkyl nitrates in a complex organic mixture, as exemplified by the detection of hydroxynitrates in isoprene derived SOA. The IMS-MS technique for the measurement of condensed-phase ANs is in its early stages of development. Accurate quantification of a given AN molecule by minimizing the ion suppression and improving the long-term stability of ESI is needed for future work.
Data presented in this paper are available upon request to the corresponding author, Xuan Zhang (firstname.lastname@example.org).
XZ, GST, JJO, JTJ, DRW and MRC designed the research; XZ, HZ, WX and XW performed the research; XZ, HZ, WX, XW, JTJ, DRW and MRC analyzed data; and XZ, GST, JJO and MRC wrote the paper.
The authors declare that they have no conflict of interest.
The National Center for Atmospheric Research is operated by the University Corporation for Atmospheric Research, under the sponsorship of the National Science Foundation.
This research has been supported by the National Science Foundation.
This paper was edited by Pierre Herckes and reviewed by two anonymous referees.
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