Articles | Volume 11, issue 11
https://doi.org/10.5194/amt-11-6203-2018
© Author(s) 2018. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/amt-11-6203-2018
© Author(s) 2018. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Research article
| 
19 Nov 2018
Research article |
| 19 Nov 2018
| 19 Nov 2018
Machine learning for improved data analysis of biological aerosol using the WIBS
Simon Ruske
CORRESPONDING AUTHOR
Centre of Atmospheric Science, SEES, University of Manchester, Manchester, UK
David O. Topping
Centre of Atmospheric Science, SEES, University of Manchester, Manchester, UK
Virginia E. Foot
Defence, Science and Technology Laboratory, Porton Down, Salisbury, UK
Andrew P. Morse
Department of Geography and Planning, University of Liverpool, Liverpool, UK
Martin W. Gallagher
Centre of Atmospheric Science, SEES, University of Manchester, Manchester, UK
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Petroc D. Shelley, Thomas J. Bannan, Stephen D. Worrall, M. Rami Alfarra, Ulrich K. Krieger, Carl J. Percival, Arthur Garforth, and David Topping
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Gary Lloyd, Thomas Choularton, Keith Bower, Jonathan Crosier, Martin Gallagher, Michael Flynn, James Dorsey, Dantong Liu, Jonathan W. Taylor, Oliver Schlenczek, Jacob Fugal, Stephan Borrmann, Richard Cotton, Paul Field, and Alan Blyth
Atmos. Chem. Phys., 20, 3895–3904, https://doi.org/10.5194/acp-20-3895-2020, https://doi.org/10.5194/acp-20-3895-2020, 2020
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Adil Shah, Joseph R. Pitt, Hugo Ricketts, J. Brian Leen, Paul I. Williams, Khristopher Kabbabe, Martin W. Gallagher, and Grant Allen
Atmos. Meas. Tech., 13, 1467–1484, https://doi.org/10.5194/amt-13-1467-2020, https://doi.org/10.5194/amt-13-1467-2020, 2020
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Methane is a potent greenhouse gas, with large flux uncertainties from facility-scale sources, such as natural gas extraction infrastructure. A recently developed flux quantification method was successfully tested by flying an unmanned aerial vehicle (UAV) downwind of 22 controlled atmospheric methane releases. The UAVs were used to derive high-precision atmospheric methane measurements. The UAV methodology was successful in both detecting the release and providing a rough flux estimate.
Natalie R. Gervasi, David O. Topping, and Andreas Zuend
Atmos. Chem. Phys., 20, 2987–3008, https://doi.org/10.5194/acp-20-2987-2020, https://doi.org/10.5194/acp-20-2987-2020, 2020
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Organic aerosols have been shown to exist often in a semi-solid or amorphous, glassy state. Highly viscous particles behave differently than their well-mixed liquid analogues with consequences for a variety of aerosol processes. Here, we introduce a new predictive mixture viscosity model called AIOMFAC-VISC. It enables us to predict the viscosity of aqueous organic mixtures as a function of temperature and chemical composition, covering the full range of liquid, semi-solid, and glassy states.
Parya Broomandi, Xueyu Geng, Weisi Guo, Jong Ryeol Kim, Alessio Pagani, and David Topping
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2019-342, https://doi.org/10.5194/gmd-2019-342, 2020
Revised manuscript not accepted
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As a result of our novel graph-based reduced modeling, we are able to represent high-dimensional knowledge into a causal inference and stability framework.
Kathryn Fowler, Paul Connolly, and David Topping
Atmos. Chem. Phys., 20, 683–698, https://doi.org/10.5194/acp-20-683-2020, https://doi.org/10.5194/acp-20-683-2020, 2020
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Observations of low–temperature cirrus clouds have found unexpectedly low ice crystal numbers and high supersaturations, suggesting an incomplete understanding of the freezing mechanisms under these conditions. The existence of viscous organic aerosol has offered alternative ice nucleation pathways, which have been observed in laboratory studies. We have developed the first cloud parcel model to investigate the effect of viscosity on ice nucleation.
Joseph R. Pitt, Grant Allen, Stéphane J.-B. Bauguitte, Martin W. Gallagher, James D. Lee, Will Drysdale, Beth Nelson, Alistair J. Manning, and Paul I. Palmer
Atmos. Chem. Phys., 19, 8931–8945, https://doi.org/10.5194/acp-19-8931-2019, https://doi.org/10.5194/acp-19-8931-2019, 2019
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This paper presents a new method to assess inventory estimates of greenhouse gas and air pollutant emissions for large cities and their surrounding regions. A case study using data sampled by a research aircraft around London was used to test the method. We found that the UK national inventory agrees with our observations for CO but needed lower emissions for CH4 to agree with the measured data. Repeated studies could help determine how these emissions vary on different timescales.
Thomas J. Bannan, Michael Le Breton, Michael Priestley, Stephen D. Worrall, Asan Bacak, Nicholas A. Marsden, Archit Mehra, Julia Hammes, Mattias Hallquist, M. Rami Alfarra, Ulrich K. Krieger, Jonathan P. Reid, John Jayne, Wade Robinson, Gordon McFiggans, Hugh Coe, Carl J. Percival, and Dave Topping
Atmos. Meas. Tech., 12, 1429–1439, https://doi.org/10.5194/amt-12-1429-2019, https://doi.org/10.5194/amt-12-1429-2019, 2019
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The Filter Inlet for Gases and AEROsols (FIGAERO) is an inlet designed to be coupled with a high-resolution time-of-flight chemical ionization mass spectrometer (HR-ToF-CIMS) and provides simultaneous molecular information relating to both the gas- and particle-phase samples. This method has been used to extract vapour pressures of compounds whilst giving quantitative concentrations in the particle phase. Here we detail an ideal set of benchmark compounds for characterization of the FIGAERO.
Elizabeth Forde, Martin Gallagher, Virginia Foot, Roland Sarda-Esteve, Ian Crawford, Paul Kaye, Warren Stanley, and David Topping
Atmos. Chem. Phys., 19, 1665–1684, https://doi.org/10.5194/acp-19-1665-2019, https://doi.org/10.5194/acp-19-1665-2019, 2019
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The abundance and diversity of airborne biological particles in different environments remains poorly constrained. Measurements of such particles were conducted at four sites in the United Kingdom, using real-time fluorescence instrumentation. Using local land cover types, sources of suspected particle types were identified and compared. Most sites exhibited a wet-discharged fungal spore dominance, with the exception of one site, which was inferred to be influenced by a local dairy farm.
Franco Marenco, Claire Ryder, Victor Estellés, Debbie O'Sullivan, Jennifer Brooke, Luke Orgill, Gary Lloyd, and Martin Gallagher
Atmos. Chem. Phys., 18, 17655–17668, https://doi.org/10.5194/acp-18-17655-2018, https://doi.org/10.5194/acp-18-17655-2018, 2018
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The AER-D airborne campaign characterised Saharan dust in the eastern Atlantic. We report an instance of unusual vertical structure of the Saharan Air Layer during an intense event, showing a large radiative impact and correlated with anomalous lightning activity. Moreover, we report a significant presence of giant dust particles. This is important because most models would miss the giant particles. Our findings may change the way we represent dust transport and deposition in the Atlantic.
Claire L. Ryder, Franco Marenco, Jennifer K. Brooke, Victor Estelles, Richard Cotton, Paola Formenti, James B. McQuaid, Hannah C. Price, Dantong Liu, Patrick Ausset, Phil D. Rosenberg, Jonathan W. Taylor, Tom Choularton, Keith Bower, Hugh Coe, Martin Gallagher, Jonathan Crosier, Gary Lloyd, Eleanor J. Highwood, and Benjamin J. Murray
Atmos. Chem. Phys., 18, 17225–17257, https://doi.org/10.5194/acp-18-17225-2018, https://doi.org/10.5194/acp-18-17225-2018, 2018
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Every year, millions of tons of Saharan dust particles are carried across the Atlantic by the wind, where they can affect weather patterns and climate. Their sizes span orders of magnitude, but the largest (over 10 microns – around the width of a human hair) are difficult to measure and few observations exist. Here we show new aircraft observations of large dust particles, finding more than we would expect, and we quantify their properties which allow them to interact with atmospheric radiation.
Gary Lloyd, Thomas W. Choularton, Keith N. Bower, Martin W. Gallagher, Jonathan Crosier, Sebastian O'Shea, Steven J. Abel, Stuart Fox, Richard Cotton, and Ian A. Boutle
Atmos. Chem. Phys., 18, 17191–17206, https://doi.org/10.5194/acp-18-17191-2018, https://doi.org/10.5194/acp-18-17191-2018, 2018
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The work deals with cold weather outbreaks at high latitudes that often bring severe weather such as heavy snow, lightning and high winds but are poorly forecast by weather models. Here we made measurements of these events and the clouds associated with them using a research aircraft. We found that the properties of these clouds were often very different to what the models predicted, and these results can potentially be used to bring significant improvement to the forecasting of these events.
Dawei Hu, David Topping, and Gordon McFiggans
Atmos. Chem. Phys., 18, 14925–14937, https://doi.org/10.5194/acp-18-14925-2018, https://doi.org/10.5194/acp-18-14925-2018, 2018
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Co-condensation of inorganic or organic vapours on growing droplets could significantly enhance both CCN and cloud droplet number concentration, thereby influencing climate. Until now, there has been very few direct observational evidence of this process. We exposed involatile inorganic particles to a moist atmosphere containing a controlled amount of an organic semi-volatile vapour. We measured a much greater growth of the particles than if they had only been exposed to water vapour.
Paul I. Palmer, Simon O'Doherty, Grant Allen, Keith Bower, Hartmut Bösch, Martyn P. Chipperfield, Sarah Connors, Sandip Dhomse, Liang Feng, Douglas P. Finch, Martin W. Gallagher, Emanuel Gloor, Siegfried Gonzi, Neil R. P. Harris, Carole Helfter, Neil Humpage, Brian Kerridge, Diane Knappett, Roderic L. Jones, Michael Le Breton, Mark F. Lunt, Alistair J. Manning, Stephan Matthiesen, Jennifer B. A. Muller, Neil Mullinger, Eiko Nemitz, Sebastian O'Shea, Robert J. Parker, Carl J. Percival, Joseph Pitt, Stuart N. Riddick, Matthew Rigby, Harjinder Sembhi, Richard Siddans, Robert L. Skelton, Paul Smith, Hannah Sonderfeld, Kieran Stanley, Ann R. Stavert, Angelina Wenger, Emily White, Christopher Wilson, and Dickon Young
Atmos. Chem. Phys., 18, 11753–11777, https://doi.org/10.5194/acp-18-11753-2018, https://doi.org/10.5194/acp-18-11753-2018, 2018
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This paper provides an overview of the Greenhouse gAs Uk and Global Emissions (GAUGE) experiment. GAUGE was designed to quantify nationwide GHG emissions of the UK, bringing together measurements and atmospheric transport models. This novel experiment is the first of its kind. We anticipate it will inform the blueprint for countries that are building a measurement infrastructure in preparation for global stocktakes, which are a key part of the Paris Agreement.
Michael Le Breton, Yujue Wang, Åsa M. Hallquist, Ravi Kant Pathak, Jing Zheng, Yudong Yang, Dongjie Shang, Marianne Glasius, Thomas J. Bannan, Qianyun Liu, Chak K. Chan, Carl J. Percival, Wenfei Zhu, Shengrong Lou, David Topping, Yuchen Wang, Jianzhen Yu, Keding Lu, Song Guo, Min Hu, and Mattias Hallquist
Atmos. Chem. Phys., 18, 10355–10371, https://doi.org/10.5194/acp-18-10355-2018, https://doi.org/10.5194/acp-18-10355-2018, 2018
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This paper utilizes a chemical ionisation mass spectrometer measuring gas and particle-phase organosulfates (OS) simultaneously during a field campaign in Beijing, China, and highlights how high time frequency online measurements enable a detailed analysis of dominant production mechanisms. We find that high aerosol acidity, organic precursor concentration and relative humidity promote the production of OS. The thermogram desorption reveals the potential for semi-volatile gas-phase OS.
James D. Lee, Stephen D. Mobbs, Axel Wellpott, Grant Allen, Stephane J.-B. Bauguitte, Ralph R. Burton, Richard Camilli, Hugh Coe, Rebecca E. Fisher, James L. France, Martin Gallagher, James R. Hopkins, Mathias Lanoiselle, Alastair C. Lewis, David Lowry, Euan G. Nisbet, Ruth M. Purvis, Sebastian O'Shea, John A. Pyle, and Thomas B. Ryerson
Atmos. Meas. Tech., 11, 1725–1739, https://doi.org/10.5194/amt-11-1725-2018, https://doi.org/10.5194/amt-11-1725-2018, 2018
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This work describes measurements, made from an aircraft platform, of the emission of methane and other organic gases from an uncontrolled leak from an oil platform in the North Sea (Total Elgin). The measurements made helped the platform operators to devise a strategy for repairing the leak and serve as a methodology for assessing future similar incidents.
Dantong Liu, Jonathan W. Taylor, Jonathan Crosier, Nicholas Marsden, Keith N. Bower, Gary Lloyd, Claire L. Ryder, Jennifer K. Brooke, Richard Cotton, Franco Marenco, Alan Blyth, Zhiqiang Cui, Victor Estelles, Martin Gallagher, Hugh Coe, and Tom W. Choularton
Atmos. Chem. Phys., 18, 3817–3838, https://doi.org/10.5194/acp-18-3817-2018, https://doi.org/10.5194/acp-18-3817-2018, 2018
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This article presents measurements of aerosol properties off the coast of west Africa during August 2015. For the first time, an airborne laser-induced incandescence instrument was deployed to measure the hematite content of dust. The single scattering albedo of dust was found to be influenced by the hematite content, but depended on the dust source and potential dust age. This highlights the importance of size-dependent composition in determining the optical properties of dust.
Stefano Decesari, Simona Kovarich, Manuela Pavan, Arianna Bassan, Andrea Ciacci, and David Topping
Atmos. Chem. Phys., 18, 2329–2340, https://doi.org/10.5194/acp-18-2329-2018, https://doi.org/10.5194/acp-18-2329-2018, 2018
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Particulate matter (PM) chemical composition includes thousands of individual organic compounds that have never been tested for their toxicological potential. Computational (in silico) screenings represent a promising approach to identify new target compounds for more in-depth toxicological analyses. We provide here a proof-of-concept evaluation based on ca. 100 aerosol organic compounds. Reliable toxicological predictions were obtained for more than 80 % of them.
Kathryn Fowler, Paul J. Connolly, David O. Topping, and Simon O'Meara
Atmos. Chem. Phys., 18, 1629–1642, https://doi.org/10.5194/acp-18-1629-2018, https://doi.org/10.5194/acp-18-1629-2018, 2018
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This is the first time the Maxwell–Stefan framework has been applied to an atmospheric aerosol core–shell model and shows that there is a complex interplay between the viscous and solubility effects on aerosol composition. Understanding aerosol composition is essential to accurately model their interactions within atmospheric systems. We use simple binary systems to demonstrate how viscosity and solubility both play a role in affecting the rate of diffusion through aerosol particles.
Ulrich K. Krieger, Franziska Siegrist, Claudia Marcolli, Eva U. Emanuelsson, Freya M. Gøbel, Merete Bilde, Aleksandra Marsh, Jonathan P. Reid, Andrew J. Huisman, Ilona Riipinen, Noora Hyttinen, Nanna Myllys, Theo Kurtén, Thomas Bannan, Carl J. Percival, and David Topping
Atmos. Meas. Tech., 11, 49–63, https://doi.org/10.5194/amt-11-49-2018, https://doi.org/10.5194/amt-11-49-2018, 2018
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Vapor pressures of low-volatility organic molecules at atmospheric temperatures reported in the literature often differ by several orders of magnitude between measurement techniques. These discrepancies exceed the stated uncertainty of each technique, which is generally reported to be smaller than a factor of 2. We determined saturation vapor pressures for the homologous series of polyethylene glycols ranging in vapor pressure at 298 K from 1E−7 Pa to 5E−2 Pa as a reference set.
Ian Crawford, Martin W. Gallagher, Keith N. Bower, Thomas W. Choularton, Michael J. Flynn, Simon Ruske, Constantino Listowski, Neil Brough, Thomas Lachlan-Cope, Zoë L. Fleming, Virginia E. Foot, and Warren R. Stanley
Atmos. Chem. Phys., 17, 14291–14307, https://doi.org/10.5194/acp-17-14291-2017, https://doi.org/10.5194/acp-17-14291-2017, 2017
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We present the first real-time detection of bioparticles on the Antarctic continent using a novel UV-LIF technique. The high time resolution of the technique allowed us to examine the relationships between bioparticle concentrations and airmass history and local winds, which would not have been possible with conventional high-volume filter sampling techniques. We also show evidence of episodic long-range transport of pollen from coastal South America to the continent.
Sebastian J. O'Shea, Thomas W. Choularton, Michael Flynn, Keith N. Bower, Martin Gallagher, Jonathan Crosier, Paul Williams, Ian Crawford, Zoë L. Fleming, Constantino Listowski, Amélie Kirchgaessner, Russell S. Ladkin, and Thomas Lachlan-Cope
Atmos. Chem. Phys., 17, 13049–13070, https://doi.org/10.5194/acp-17-13049-2017, https://doi.org/10.5194/acp-17-13049-2017, 2017
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Few direct measurements have been made of Antarctic cloud and aerosol properties. As part of the 2015 Microphysics of Antarctic Clouds (MAC) field campaign, detailed airborne and ground-based measurements were made over the Weddell Sea and Antarctic coastal continent. This paper presents the first results from this campaign and discusses the cloud properties and processes important in this region.
Anja Costa, Jessica Meyer, Armin Afchine, Anna Luebke, Gebhard Günther, James R. Dorsey, Martin W. Gallagher, Andre Ehrlich, Manfred Wendisch, Darrel Baumgardner, Heike Wex, and Martina Krämer
Atmos. Chem. Phys., 17, 12219–12238, https://doi.org/10.5194/acp-17-12219-2017, https://doi.org/10.5194/acp-17-12219-2017, 2017
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The paper presents 38 h of in situ cloud spectrometer observations of microphysical cloud properties in the Arctic, midlatitudes and tropics. The clouds are classified via particle concentrations, size distributions, and – as a novelty – small particle aspherical fractions. Cloud-type profiles are given for different temperatures and locations. The results confine regions where different cloud transformation processes occurred and emphasise the importance of small particle shape detection.
Simon O'Meara, David O. Topping, Rahul A. Zaveri, and Gordon McFiggans
Atmos. Chem. Phys., 17, 10477–10494, https://doi.org/10.5194/acp-17-10477-2017, https://doi.org/10.5194/acp-17-10477-2017, 2017
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To simulate particle-phase diffusion, an analytical expression is desired because it takes less calculation time than a differential equation. Here a correction is found for the analytical solution for when diffusivity is dependent on composition, thereby making it more widely applicable than before. Consequently, we are able to more realistically evaluate the rate limitation (if any) imposed by particle-phase diffusion on component partitioning between the gas and particle phase.
Leonid Nichman, Emma Järvinen, James Dorsey, Paul Connolly, Jonathan Duplissy, Claudia Fuchs, Karoliina Ignatius, Kamalika Sengupta, Frank Stratmann, Ottmar Möhler, Martin Schnaiter, and Martin Gallagher
Atmos. Meas. Tech., 10, 3231–3248, https://doi.org/10.5194/amt-10-3231-2017, https://doi.org/10.5194/amt-10-3231-2017, 2017
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Optical probes are frequently used for the detection of cloud particles. The detected microphysical properties may affect particle growth and accretion mechanisms and the light scattering properties of cirrus clouds. In the CLOUD chamber study at CERN, we compared four optical measurement techniques. We show that shape derivation alone is not sufficient to determine the phase of the small cloud particles. None of the instruments were able to unambiguously determine the phase of small particles.
David O. Topping, James Allan, M. Rami Alfarra, and Bernard Aumont
Geosci. Model Dev., 10, 2365–2377, https://doi.org/10.5194/gmd-10-2365-2017, https://doi.org/10.5194/gmd-10-2365-2017, 2017
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Our ability to model the chemical and thermodynamic processes that lead to secondary organic aerosol (SOA) formation is thought to be hampered by the complexity of the system. In this proof of concept study, the ability to train supervised methods to predict electron impact ionisation (EI) mass spectra for the AMS is evaluated to facilitate improved model evaluation. The study demonstrates the use of a methodology that would be improved with more training data and data from simple mixed systems.
Simon Ruske, David O. Topping, Virginia E. Foot, Paul H. Kaye, Warren R. Stanley, Ian Crawford, Andrew P. Morse, and Martin W. Gallagher
Atmos. Meas. Tech., 10, 695–708, https://doi.org/10.5194/amt-10-695-2017, https://doi.org/10.5194/amt-10-695-2017, 2017
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Particles such as bacteria, pollen and fungal spores have important implications within the environment and public health sectors. Here we evaluate the performance of various different methods for distinguishing between these different types of particles using a new instrument. We demonstrate that there may be better alternatives to the currently used methods which can be further investigated in future research.
Marie Ila Gosselin, Chathurika M. Rathnayake, Ian Crawford, Christopher Pöhlker, Janine Fröhlich-Nowoisky, Beatrice Schmer, Viviane R. Després, Guenter Engling, Martin Gallagher, Elizabeth Stone, Ulrich Pöschl, and J. Alex Huffman
Atmos. Chem. Phys., 16, 15165–15184, https://doi.org/10.5194/acp-16-15165-2016, https://doi.org/10.5194/acp-16-15165-2016, 2016
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We present an analysis of bioaerosol measurements using two real-time fluorescence instruments in combination with molecular tracer techniques for quantifying airborne fungal spores in a semi-arid forest. Both techniques provide fungal spore concentrations of the order of 104 m−3 and up to 30 % of particle mass. Rainy periods exhibited higher concentrations and stronger correlations between fluorescent bioparticle and molecular tracer measurements. Fungal culture results are also presented.
Gillian Young, Hazel M. Jones, Thomas W. Choularton, Jonathan Crosier, Keith N. Bower, Martin W. Gallagher, Rhiannon S. Davies, Ian A. Renfrew, Andrew D. Elvidge, Eoghan Darbyshire, Franco Marenco, Philip R. A. Brown, Hugo M. A. Ricketts, Paul J. Connolly, Gary Lloyd, Paul I. Williams, James D. Allan, Jonathan W. Taylor, Dantong Liu, and Michael J. Flynn
Atmos. Chem. Phys., 16, 13945–13967, https://doi.org/10.5194/acp-16-13945-2016, https://doi.org/10.5194/acp-16-13945-2016, 2016
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Clouds are intricately coupled to the Arctic sea ice. Our inability to accurately model cloud fractions causes large uncertainties in predicted radiative interactions in this region, therefore, affecting sea ice forecasts. Here, we present measurements of cloud microphysics, aerosol properties, and thermodynamic structure over the transition from sea ice to ocean to improve our understanding of the relationship between the Arctic atmosphere and clouds which develop in this region.
François Benduhn, Graham W. Mann, Kirsty J. Pringle, David O. Topping, Gordon McFiggans, and Kenneth S. Carslaw
Geosci. Model Dev., 9, 3875–3906, https://doi.org/10.5194/gmd-9-3875-2016, https://doi.org/10.5194/gmd-9-3875-2016, 2016
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We present a new mathematical formalism that serves to represent exchanges of inorganic matter between the atmosphere gas phase and the aerosol aqueous phase. In a global modelling framework, taking into account these processes may help represent many important features more accurately, such as the formation of cloud droplets or the radiative properties of the atmosphere. The formalism strives to keep an appropriate balance between accuracy and computation efficiency requirements.
Matthew Crooks, Paul Connolly, David Topping, and Gordon McFiggans
Geosci. Model Dev., 9, 3617–3637, https://doi.org/10.5194/gmd-9-3617-2016, https://doi.org/10.5194/gmd-9-3617-2016, 2016
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Semi-volatile compounds, like water, can exist in both vapour phases and condensed phases within a system. This paper presents a method of calculating the condensed and vapour phases of semi-volatile compounds at equilibrium, in particular, when the condensed mass occurs within particles of different sizes and chemical composition. The applications of interest to the authors are those of atmospheric importance such as cloud droplet formation and reflection or absorption of solar radiation.
Jonathan W. Taylor, Thomas W. Choularton, Alan M. Blyth, Michael J. Flynn, Paul I. Williams, Gillian Young, Keith N. Bower, Jonathan Crosier, Martin W. Gallagher, James R. Dorsey, Zixia Liu, and Philip D. Rosenberg
Atmos. Chem. Phys., 16, 11687–11709, https://doi.org/10.5194/acp-16-11687-2016, https://doi.org/10.5194/acp-16-11687-2016, 2016
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We present measurements of boundary layer aerosol concentration, size and composition from research flights performed over the southwest peninsula of the UK during the COnvective Precipitation Experiment (COPE) of summer 2013. We compare case studies of aerosol in cleaner marine air from the Atlantic with anthropogenic pollution from the UK. These measurements are then used to investigate the possible sources of CCN and IN in the region.
Samuel Lowe, Daniel G. Partridge, David Topping, and Philip Stier
Atmos. Chem. Phys., 16, 10941–10963, https://doi.org/10.5194/acp-16-10941-2016, https://doi.org/10.5194/acp-16-10941-2016, 2016
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A novel inverse modelling framework is developed for analysing the sensitivity of cloud condensation nuclei (CCN) concentrations to simultaneous perturbations in multiple model parameters at atmospherically relevant humidities. Many parameter interactions are identified and CCN concentrations are found to be relatively insensitive to bulk–surface partitioning, while aerosol concentration, surface tension, composition and solution ideality exhibit a higher degree of sensitivity.
James D. Whitehead, Eoghan Darbyshire, Joel Brito, Henrique M. J. Barbosa, Ian Crawford, Rafael Stern, Martin W. Gallagher, Paul H. Kaye, James D. Allan, Hugh Coe, Paulo Artaxo, and Gordon McFiggans
Atmos. Chem. Phys., 16, 9727–9743, https://doi.org/10.5194/acp-16-9727-2016, https://doi.org/10.5194/acp-16-9727-2016, 2016
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We present measurements of aerosols during the transition from wet to dry seasons at a pristine rainforest site in central Amazonia. By excluding pollution episodes, we focus on natural biogenic aerosols. Submicron aerosols are dominated by organic material, similar to previous wet season measurements. Larger particles are dominated by biological material, mostly fungal spores, with higher concentrations at night. This study provides important data on the nature of particles above the Amazon.
Karoliina Ignatius, Thomas B. Kristensen, Emma Järvinen, Leonid Nichman, Claudia Fuchs, Hamish Gordon, Paul Herenz, Christopher R. Hoyle, Jonathan Duplissy, Sarvesh Garimella, Antonio Dias, Carla Frege, Niko Höppel, Jasmin Tröstl, Robert Wagner, Chao Yan, Antonio Amorim, Urs Baltensperger, Joachim Curtius, Neil M. Donahue, Martin W. Gallagher, Jasper Kirkby, Markku Kulmala, Ottmar Möhler, Harald Saathoff, Martin Schnaiter, Antonio Tomé, Annele Virtanen, Douglas Worsnop, and Frank Stratmann
Atmos. Chem. Phys., 16, 6495–6509, https://doi.org/10.5194/acp-16-6495-2016, https://doi.org/10.5194/acp-16-6495-2016, 2016
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Viscous solid or semi-solid secondary organic aerosol (SOA) may influence cloud properties through ice nucleation in the atmosphere. Here, we observed heterogeneous ice nucleation of viscous α-pinene SOA at temperatures between −39 °C and −37.2 °C with ice saturation ratios significantly below the homogeneous freezing limit. Global modelling suggests that viscous biogenic SOA are present in regions where cirrus formation takes place and could contribute to the global ice nuclei budget.
Simon O'Meara, David O. Topping, and Gordon McFiggans
Atmos. Chem. Phys., 16, 5299–5313, https://doi.org/10.5194/acp-16-5299-2016, https://doi.org/10.5194/acp-16-5299-2016, 2016
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To understand the effect of atmospheric particulate matter on climate and human health we need to know how it evolves. We investigate how best to estimate diffusion of components through particles by comparing diffusion times from three approaches to solving Fick's Law and find that they agree. This means that scientists can simulate Fickian diffusion through atmospheric particles using the approach best suited to their requirements and have confidence that their model is mathematically sound.
Rebecca M. McKenzie, Mustafa Z. Özel, J. Neil Cape, Julia Drewer, Kerry J. Dinsmore, Eiko Nemitz, Y. Sim Tang, Netty van Dijk, Margaret Anderson, Jacqueline F. Hamilton, Mark A. Sutton, Martin W. Gallagher, and Ute Skiba
Biogeosciences, 13, 2353–2365, https://doi.org/10.5194/bg-13-2353-2016, https://doi.org/10.5194/bg-13-2353-2016, 2016
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Dissolved organic nitrogen (DON) contributes significantly to the overall nitrogen budget and can potentially be biologically available as a source of N. Despite this it is not routinely measured. This study found that DON contributed up to 10 % of the total dissolved nitrogen (TDN) found in precipitation and was the most dominant fraction in soil water (99 %) and stream water (75 %).
Robert J. Farrington, Paul J. Connolly, Gary Lloyd, Keith N. Bower, Michael J. Flynn, Martin W. Gallagher, Paul R. Field, Chris Dearden, and Thomas W. Choularton
Atmos. Chem. Phys., 16, 4945–4966, https://doi.org/10.5194/acp-16-4945-2016, https://doi.org/10.5194/acp-16-4945-2016, 2016
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This paper assesses the reasons for high ice number concentrations observed in orographic clouds by comparing observations with model simulations over Jungfraujoch, Switzerland. The results suggest that ice nuclei do not significantly contribute to the high concentrations and that a surface source of ice crystals is responsible for the witnessed ice number concentrations.
Emma Järvinen, Karoliina Ignatius, Leonid Nichman, Thomas B. Kristensen, Claudia Fuchs, Christopher R. Hoyle, Niko Höppel, Joel C. Corbin, Jill Craven, Jonathan Duplissy, Sebastian Ehrhart, Imad El Haddad, Carla Frege, Hamish Gordon, Tuija Jokinen, Peter Kallinger, Jasper Kirkby, Alexei Kiselev, Karl-Heinz Naumann, Tuukka Petäjä, Tamara Pinterich, Andre S. H. Prevot, Harald Saathoff, Thea Schiebel, Kamalika Sengupta, Mario Simon, Jay G. Slowik, Jasmin Tröstl, Annele Virtanen, Paul Vochezer, Steffen Vogt, Andrea C. Wagner, Robert Wagner, Christina Williamson, Paul M. Winkler, Chao Yan, Urs Baltensperger, Neil M. Donahue, Rick C. Flagan, Martin Gallagher, Armin Hansel, Markku Kulmala, Frank Stratmann, Douglas R. Worsnop, Ottmar Möhler, Thomas Leisner, and Martin Schnaiter
Atmos. Chem. Phys., 16, 4423–4438, https://doi.org/10.5194/acp-16-4423-2016, https://doi.org/10.5194/acp-16-4423-2016, 2016
G. Young, H. M. Jones, E. Darbyshire, K. J. Baustian, J. B. McQuaid, K. N. Bower, P. J. Connolly, M. W. Gallagher, and T. W. Choularton
Atmos. Chem. Phys., 16, 4063–4079, https://doi.org/10.5194/acp-16-4063-2016, https://doi.org/10.5194/acp-16-4063-2016, 2016
Leonid Nichman, Claudia Fuchs, Emma Järvinen, Karoliina Ignatius, Niko Florian Höppel, Antonio Dias, Martin Heinritzi, Mario Simon, Jasmin Tröstl, Andrea Christine Wagner, Robert Wagner, Christina Williamson, Chao Yan, Paul James Connolly, James Robert Dorsey, Jonathan Duplissy, Sebastian Ehrhart, Carla Frege, Hamish Gordon, Christopher Robert Hoyle, Thomas Bjerring Kristensen, Gerhard Steiner, Neil McPherson Donahue, Richard Flagan, Martin William Gallagher, Jasper Kirkby, Ottmar Möhler, Harald Saathoff, Martin Schnaiter, Frank Stratmann, and António Tomé
Atmos. Chem. Phys., 16, 3651–3664, https://doi.org/10.5194/acp-16-3651-2016, https://doi.org/10.5194/acp-16-3651-2016, 2016
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Processes in the atmosphere are often governed by the physical and chemical properties of small cloud particles. Ice, water, and mixed clouds, as well as viscous aerosols, were formed under controlled conditions at the CLOUD-CERN facility. The experimental results show a link between cloud particle properties and their unique optical fingerprints. The classification map presented here allows easier discrimination between various particles such as viscous organic aerosol, salt, ice, and liquid.
David Topping, Mark Barley, Michael K. Bane, Nicholas Higham, Bernard Aumont, Nicholas Dingle, and Gordon McFiggans
Geosci. Model Dev., 9, 899–914, https://doi.org/10.5194/gmd-9-899-2016, https://doi.org/10.5194/gmd-9-899-2016, 2016
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In this paper we describe the development and application of a new web-based and open-source facility, UManSysProp (http://umansysprop .seaes.manchester.ac.uk), for automating predictions of molecular and atmospheric aerosol properties. Current facilities include pure component vapour pressures, critical properties, and sub-cooled densities of organic molecules; activity coefficient predictions for mixed inorganic-organic liquid systems; hygroscopic growth factors and CCN activation potential.
I. Crawford, G. Lloyd, E. Herrmann, C. R. Hoyle, K. N. Bower, P. J. Connolly, M. J. Flynn, P. H. Kaye, T. W. Choularton, and M. W. Gallagher
Atmos. Chem. Phys., 16, 2273–2284, https://doi.org/10.5194/acp-16-2273-2016, https://doi.org/10.5194/acp-16-2273-2016, 2016
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In this manuscript we discuss observations of fluorescent aerosol and their interactions with cloud at a high-alpine site in the wintertime under background conditions. We find the majority of the fluorescent aerosol to be consistent in nature to mineral dust and no apparent trend was observed between the fluorescent aerosol fraction and meteorological or cloud microphysical parameters, suggesting that particle fluorescence does not impact cloud evolution or formation at the site.
C. R. Hoyle, C. Fuchs, E. Järvinen, H. Saathoff, A. Dias, I. El Haddad, M. Gysel, S. C. Coburn, J. Tröstl, A.-K. Bernhammer, F. Bianchi, M. Breitenlechner, J. C. Corbin, J. Craven, N. M. Donahue, J. Duplissy, S. Ehrhart, C. Frege, H. Gordon, N. Höppel, M. Heinritzi, T. B. Kristensen, U. Molteni, L. Nichman, T. Pinterich, A. S. H. Prévôt, M. Simon, J. G. Slowik, G. Steiner, A. Tomé, A. L. Vogel, R. Volkamer, A. C. Wagner, R. Wagner, A. S. Wexler, C. Williamson, P. M. Winkler, C. Yan, A. Amorim, J. Dommen, J. Curtius, M. W. Gallagher, R. C. Flagan, A. Hansel, J. Kirkby, M. Kulmala, O. Möhler, F. Stratmann, D. R. Worsnop, and U. Baltensperger
Atmos. Chem. Phys., 16, 1693–1712, https://doi.org/10.5194/acp-16-1693-2016, https://doi.org/10.5194/acp-16-1693-2016, 2016
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A significant portion of sulphate, an important constituent of atmospheric aerosols, is formed via the aqueous phase oxidation of sulphur dioxide by ozone. The rate of this reaction has previously only been measured over a relatively small temperature range. Here, we use the state of the art CLOUD chamber at CERN to perform the first measurements of this reaction rate in super-cooled droplets, confirming that the existing extrapolation of the reaction rate to sub-zero temperatures is accurate.
J. W. Taylor, T. W. Choularton, A. M. Blyth, Z. Liu, K. N. Bower, J. Crosier, M. W. Gallagher, P. I. Williams, J. R. Dorsey, M. J. Flynn, L. J. Bennett, Y. Huang, J. French, A. Korolev, and P. R. A. Brown
Atmos. Chem. Phys., 16, 799–826, https://doi.org/10.5194/acp-16-799-2016, https://doi.org/10.5194/acp-16-799-2016, 2016
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We present microphysical observations of cumulus clouds measured over south-west England during COPE in summer 2013. Detailed sampling focused on an isolated liquid cloud that glaciated as it matured to merge with a band of cloud downwind. The first ice particles observed were frozen drizzle, while columnar ice dominated in the mature stages. We discuss the interactions between the warm rain and secondary ice processes, and their importance for the formation of precipitation.
J. R. Pitt, M. Le Breton, G. Allen, C. J. Percival, M. W. Gallagher, S. J.-B. Bauguitte, S. J. O'Shea, J. B. A. Muller, M. S. Zahniser, J. Pyle, and P. I. Palmer
Atmos. Meas. Tech., 9, 63–77, https://doi.org/10.5194/amt-9-63-2016, https://doi.org/10.5194/amt-9-63-2016, 2016
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We present details of an Aerodyne quantum cascade laser absorption spectrometer (QCLAS) used to make airborne measurements of N2O and CH4, including its configuration for use on board an aircraft. Two different methods to correct for the influence of water vapour on the measurements are evaluated. We diagnose a sensitivity of the instrument to changes in pressure, introduce a new calibration procedure to account for this effect, and assess its performance.
I. Crawford, S. Ruske, D. O. Topping, and M. W. Gallagher
Atmos. Meas. Tech., 8, 4979–4991, https://doi.org/10.5194/amt-8-4979-2015, https://doi.org/10.5194/amt-8-4979-2015, 2015
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HCA analysis methods were evaluated for the purpose of identifying primary biological aerosol sampled with a WIBS. The ward linkage with z-score normalisation could discriminate between five test particles with 98% accuracy. We applied these methods to a previously studied ambient data set, where both methods produced similar results with some minor differences in cluster partitioning. Finally we compared to previous approaches and found our new method offered improved quantification of PBA.
G. Lloyd, T. W. Choularton, K. N. Bower, M. W. Gallagher, P. J. Connolly, M. Flynn, R. Farrington, J. Crosier, O. Schlenczek, J. Fugal, and J. Henneberger
Atmos. Chem. Phys., 15, 12953–12969, https://doi.org/10.5194/acp-15-12953-2015, https://doi.org/10.5194/acp-15-12953-2015, 2015
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The paper explores the microphysical structure of clouds at the high-alpine measurement site Jungfraujoch, Switzerland. High concentrations of ice crystals were measured by a range of instruments. The presence of these high concentrations could not be explained through conventional understanding of ice formation processes in clouds and the possibility that the surface provides a significant source of ice crystals is investigated.
D. Liu, B. Quennehen, E. Darbyshire, J. D. Allan, P. I. Williams, J. W. Taylor, S. J.-B. Bauguitte, M. J. Flynn, D. Lowe, M. W. Gallagher, K. N. Bower, T. W. Choularton, and H. Coe
Atmos. Chem. Phys., 15, 11537–11555, https://doi.org/10.5194/acp-15-11537-2015, https://doi.org/10.5194/acp-15-11537-2015, 2015
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We show that during the springtime of 2013, the anthropogenic pollution particularly from sources in Asia, contributed significantly to black carbon across the European Arctic free troposphere. In contrast to previous studies, the contribution from open wildfires was minimal. Given that Asian pollution is likely to continue to rise over the coming years, it is likely that the radiative forcing in the Arctic will also continue to increase.
D. E. Young, J. D. Allan, P. I. Williams, D. C. Green, M. J. Flynn, R. M. Harrison, J. Yin, M. W. Gallagher, and H. Coe
Atmos. Chem. Phys., 15, 6351–6366, https://doi.org/10.5194/acp-15-6351-2015, https://doi.org/10.5194/acp-15-6351-2015, 2015
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For the first time, the behaviour of non-refractory inorganic and organic submicron particulates through an entire annual cycle is investigated at a UK urban background site. We show secondary aerosols account for a significant fraction of the submicron aerosol burden, high concentration events are governed by different factors depending on season, and on an annual basis there is no variability in the extent of secondary organic aerosol oxidation.
M. Hummel, C. Hoose, M. Gallagher, D. A. Healy, J. A. Huffman, D. O'Connor, U. Pöschl, C. Pöhlker, N. H. Robinson, M. Schnaiter, J. R. Sodeau, M. Stengel, E. Toprak, and H. Vogel
Atmos. Chem. Phys., 15, 6127–6146, https://doi.org/10.5194/acp-15-6127-2015, https://doi.org/10.5194/acp-15-6127-2015, 2015
G. Lloyd, T. W. Choularton, K. N. Bower, J. Crosier, H. Jones, J. R. Dorsey, M. W. Gallagher, P. Connolly, A. C. R. Kirchgaessner, and T. Lachlan-Cope
Atmos. Chem. Phys., 15, 3719–3737, https://doi.org/10.5194/acp-15-3719-2015, https://doi.org/10.5194/acp-15-3719-2015, 2015
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Measurements of cloud microphysics are reported from the Aerosol-Cloud Coupling And Climate Interactions (ACCACIA) campaign. Concentrations of ice particles from two spring and two summer cases are compared with particular attention to the role of secondary ice in these clouds. In addition aerosol measurements were used as input to a primary ice nucleation parameterisation which was compared with observed values of primary ice in these clouds. We found higher concentrations of ice during summer.
D. E. Young, J. D. Allan, P. I. Williams, D. C. Green, R. M. Harrison, J. Yin, M. J. Flynn, M. W. Gallagher, and H. Coe
Atmos. Chem. Phys., 15, 2429–2443, https://doi.org/10.5194/acp-15-2429-2015, https://doi.org/10.5194/acp-15-2429-2015, 2015
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Two solid fuel organic aerosol (SFOA) factors, both associated with domestic space heating activities, were derived from positive matrix factorisation (PMF) applied to organic aerosol data from an aerosol mass spectrometer (AMS) deployed at an urban background site in London during winter 2012. The factors controlling the split between the two SFOA factors were assessed, and it is concluded the split is likely governed predominantly by differences in burn conditions.
G. Allen, S. M. Illingworth, S. J. O'Shea, S. Newman, A. Vance, S. J.-B. Bauguitte, F. Marenco, J. Kent, K. Bower, M. W. Gallagher, J. Muller, C. J. Percival, C. Harlow, J. Lee, and J. P. Taylor
Atmos. Meas. Tech., 7, 4401–4416, https://doi.org/10.5194/amt-7-4401-2014, https://doi.org/10.5194/amt-7-4401-2014, 2014
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This paper presents a validated method and data set for new retrievals of trace gas concentrations and temperature from the ARIES infrared spectrometer instrument on the UK Atmospheric Research Aircraft (www.faam.ac.uk). This new capability for the aircraft will allow new science to be done because of the way it can sense information about the atmosphere without having to physically pass through it (remote sensing). This will allow us to better understand the make-up of the lower atmosphere.
S. J. O'Shea, G. Allen, M. W. Gallagher, K. Bower, S. M. Illingworth, J. B. A. Muller, B. T. Jones, C. J. Percival, S. J-B. Bauguitte, M. Cain, N. Warwick, A. Quiquet, U. Skiba, J. Drewer, K. Dinsmore, E. G. Nisbet, D. Lowry, R. E. Fisher, J. L. France, M. Aurela, A. Lohila, G. Hayman, C. George, D. B. Clark, A. J. Manning, A. D. Friend, and J. Pyle
Atmos. Chem. Phys., 14, 13159–13174, https://doi.org/10.5194/acp-14-13159-2014, https://doi.org/10.5194/acp-14-13159-2014, 2014
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This paper presents airborne measurements of greenhouse gases collected in the European Arctic. Regional scale flux estimates for the northern Scandinavian wetlands are derived. These fluxes are found to be in excellent agreement with coincident surface measurements within the aircraft's sampling domain. This has allowed a significant low bias to be identified in two commonly used process-based land surface models.
D. Liu, J. D. Allan, D. E. Young, H. Coe, D. Beddows, Z. L. Fleming, M. J. Flynn, M. W. Gallagher, R. M. Harrison, J. Lee, A. S. H. Prevot, J. W. Taylor, J. Yin, P. I. Williams, and P. Zotter
Atmos. Chem. Phys., 14, 10061–10084, https://doi.org/10.5194/acp-14-10061-2014, https://doi.org/10.5194/acp-14-10061-2014, 2014
I. Crawford, N. H. Robinson, M. J. Flynn, V. E. Foot, M. W. Gallagher, J. A. Huffman, W. R. Stanley, and P. H. Kaye
Atmos. Chem. Phys., 14, 8559–8578, https://doi.org/10.5194/acp-14-8559-2014, https://doi.org/10.5194/acp-14-8559-2014, 2014
K. Beswick, D. Baumgardner, M. Gallagher, A. Volz-Thomas, P. Nedelec, K.-Y. Wang, and S. Lance
Atmos. Meas. Tech., 7, 1443–1457, https://doi.org/10.5194/amt-7-1443-2014, https://doi.org/10.5194/amt-7-1443-2014, 2014
P. J. Connolly, D. O. Topping, F. Malavelle, and G. McFiggans
Atmos. Chem. Phys., 14, 2289–2302, https://doi.org/10.5194/acp-14-2289-2014, https://doi.org/10.5194/acp-14-2289-2014, 2014
S. J. O'Shea, G. Allen, M. W. Gallagher, S. J.-B. Bauguitte, S. M. Illingworth, M. Le Breton, J. B. A. Muller, C. J. Percival, A. T. Archibald, D. E. Oram, M. Parrington, P. I. Palmer, and A. C. Lewis
Atmos. Chem. Phys., 13, 12451–12467, https://doi.org/10.5194/acp-13-12451-2013, https://doi.org/10.5194/acp-13-12451-2013, 2013
A. M. Gabey, M. Vaitilingom, E. Freney, J. Boulon, K. Sellegri, M. W. Gallagher, I. P. Crawford, N. H. Robinson, W. R. Stanley, and P. H. Kaye
Atmos. Chem. Phys., 13, 7415–7428, https://doi.org/10.5194/acp-13-7415-2013, https://doi.org/10.5194/acp-13-7415-2013, 2013
J. A. Huffman, A. J. Prenni, P. J. DeMott, C. Pöhlker, R. H. Mason, N. H. Robinson, J. Fröhlich-Nowoisky, Y. Tobo, V. R. Després, E. Garcia, D. J. Gochis, E. Harris, I. Müller-Germann, C. Ruzene, B. Schmer, B. Sinha, D. A. Day, M. O. Andreae, J. L. Jimenez, M. Gallagher, S. M. Kreidenweis, A. K. Bertram, and U. Pöschl
Atmos. Chem. Phys., 13, 6151–6164, https://doi.org/10.5194/acp-13-6151-2013, https://doi.org/10.5194/acp-13-6151-2013, 2013
S. J. O'Shea, S. J.-B. Bauguitte, M. W. Gallagher, D. Lowry, and C. J. Percival
Atmos. Meas. Tech., 6, 1095–1109, https://doi.org/10.5194/amt-6-1095-2013, https://doi.org/10.5194/amt-6-1095-2013, 2013
N. H. Robinson, J. D. Allan, J. A. Huffman, P. H. Kaye, V. E. Foot, and M. Gallagher
Atmos. Meas. Tech., 6, 337–347, https://doi.org/10.5194/amt-6-337-2013, https://doi.org/10.5194/amt-6-337-2013, 2013
Related subject area
Subject: Aerosols | Technique: Laboratory Measurement | Topic: Data Processing and Information Retrieval
Estimating errors in vehicle secondary aerosol production factors due to oxidation flow reactor response time
Quantifying functional group compositions of household fuel-burning emissions
A new software toolkit for optical apportionment of carbonaceous aerosol
Theoretical derivation of aerosol lidar ratio using Mie theory for CALIOP-CALIPSO and OPAC aerosol models
An extraction method for nitrogen isotope measurement of ammonium in a low-concentration environment
Estimation of secondary organic aerosol formation parameters for the volatility basis set combining thermodenuder, isothermal dilution, and yield measurements
Characterization of offline analysis of particulate matter with FIGAERO-CIMS
Mass spectrometry-based Aerosolomics: a new approach to resolve sources, composition, and partitioning of secondary organic aerosol
A universally applicable method of calculating confidence bands for ice nucleation spectra derived from droplet freezing experiments
Thermal–optical analysis of quartz fiber filters loaded with snow samples – determination of iron based on interferences caused by mineral dust
Modelling ultrafine particle growth in a flow tube reactor
Substantial organic impurities at the surface of synthetic ammonium sulfate particles
Contrasting mineral dust abundances from X-ray diffraction and reflectance spectroscopy
Fragment ion–functional group relationships in organic aerosols using aerosol mass spectrometry and mid-infrared spectroscopy
Evolution under dark conditions of particles from old and modern diesel vehicles in a new environmental chamber characterized with fresh exhaust emissions
Quantification of isomer-resolved iodide chemical ionization mass spectrometry sensitivity and uncertainty using a voltage-scanning approach
Assessing the sources of particles at an urban background site using both regulatory instruments and low-cost sensors – a comparative study
High-resolution optical constants of crystalline ammonium nitrate for infrared remote sensing of the Asian Tropopause Aerosol Layer
Assessing the accuracy of low-cost optical particle sensors using a physics-based approach
Comparison of dimension reduction techniques in the analysis of mass spectrometry data
Development of a new correction algorithm applicable to any filter-based absorption photometer
Chemical discrimination of the particulate and gas phases of miniCAST exhausts using a two-filter collection method
External and internal cloud condensation nuclei (CCN) mixtures: controlled laboratory studies of varying mixing states
Classification of iron oxide aerosols by a single particle soot photometer using supervised machine learning
Method to measure the size-resolved real part of aerosol refractive index using differential mobility analyzer in tandem with single-particle soot photometer
Quantitative capabilities of STXM to measure spatially resolved organic volume fractions of mixed organic ∕ inorganic particles
Revisiting the differential freezing nucleus spectra derived from drop-freezing experiments: methods of calculation, applications, and confidence limits
Particle wall-loss correction methods in smog chamber experiments
Improved real-time bio-aerosol classification using artificial neural networks
A machine learning approach to aerosol classification for single-particle mass spectrometry
Evaluation of a hierarchical agglomerative clustering method applied to WIBS laboratory data for improved discrimination of biological particles by comparing data preparation techniques
Using depolarization to quantify ice nucleating particle concentrations: a new method
Real-time analysis of insoluble particles in glacial ice using single-particle mass spectrometry
Evaluation of machine learning algorithms for classification of primary biological aerosol using a new UV-LIF spectrometer
Size distribution of particle-associated polybrominated diphenyl ethers (PBDEs) and their implications for health
Predicting ambient aerosol thermal–optical reflectance (TOR) measurements from infrared spectra: extending the predictions to different years and different sites
Electrodynamic balance measurements of thermodynamic, kinetic, and optical aerosol properties inaccessible to bulk methods
Mass-specific optical absorption coefficients and imaginary part of the complex refractive indices of mineral dust components measured by a multi-wavelength photoacoustic spectrometer
An experiment to measure raindrop collection efficiencies: influence of rear capture
Quantitative single-particle analysis with the Aerodyne aerosol mass spectrometer: development of a new classification algorithm and its application to field data
A modeling approach to evaluate the uncertainty in estimating the evaporation behaviour and volatility of organic aerosols
A model of aerosol evaporation kinetics in a thermodenuder
Pauli Simonen, Miikka Dal Maso, Pinja Prauda, Anniina Hoilijoki, Anette Karppinen, Pekka Matilainen, Panu Karjalainen, and Jorma Keskinen
Atmos. Meas. Tech., 17, 3219–3236, https://doi.org/10.5194/amt-17-3219-2024, https://doi.org/10.5194/amt-17-3219-2024, 2024
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Secondary aerosol is formed in the atmosphere from gaseous emissions. Oxidation flow reactors used in secondary aerosol research do not immediately respond to changes in the inlet concentration of gases because of their broad transfer functions. This may result in incorrect secondary aerosol production factors determined for vehicles. We studied the extent of possible errors and found that oxidation flow reactors with faster responses result in smaller errors.
Emily Y. Li, Amir Yazdani, Ann M. Dillner, Guofeng Shen, Wyatt M. Champion, James J. Jetter, William T. Preston, Lynn M. Russell, Michael D. Hays, and Satoshi Takahama
Atmos. Meas. Tech., 17, 2401–2413, https://doi.org/10.5194/amt-17-2401-2024, https://doi.org/10.5194/amt-17-2401-2024, 2024
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Infrared spectroscopy is a cost-effective measurement technique to characterize the chemical composition of organic aerosol emissions. This technique differentiates the organic matter emission factor from different fuel sources by their characteristic functional groups. Comparison with collocated measurements suggests that polycyclic aromatic hydrocarbon concentrations in emissions estimated by conventional chromatography may be substantially underestimated.
Tommaso Isolabella, Vera Bernardoni, Alessandro Bigi, Marco Brunoldi, Federico Mazzei, Franco Parodi, Paolo Prati, Virginia Vernocchi, and Dario Massabò
Atmos. Meas. Tech., 17, 1363–1373, https://doi.org/10.5194/amt-17-1363-2024, https://doi.org/10.5194/amt-17-1363-2024, 2024
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We present an innovative software toolkit to differentiate sources of carbonaceous aerosol in the atmosphere. Our toolkit implements an upgraded mathematical model which allows for determination of fundamental optical properties of the aerosol, its sources, and the mass concentration of different carbonaceous species of particulate matter. We have tested the functionality of the software by re-analysing published data, and we obtained a compatible results with additional information.
Radhika A. Chipade and Mehul R. Pandya
Atmos. Meas. Tech., 16, 5443–5459, https://doi.org/10.5194/amt-16-5443-2023, https://doi.org/10.5194/amt-16-5443-2023, 2023
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The extinction-to-backscattering ratio, popularly known as lidar ratio of atmospheric aerosols, is an important optical property, which is essential to retrieve the extinction profiles of atmospheric aerosols. A physics-based theoretical approach is presented in the present paper that estimates lidar ratio values for CALIPSO and OPAC aerosol models, which can be used as inputs to determine the extinction profiles of aerosols using CALIPSO data.
Alexis Lamothe, Joel Savarino, Patrick Ginot, Lison Soussaintjean, Elsa Gautier, Pete D. Akers, Nicolas Caillon, and Joseph Erbland
Atmos. Meas. Tech., 16, 4015–4030, https://doi.org/10.5194/amt-16-4015-2023, https://doi.org/10.5194/amt-16-4015-2023, 2023
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Ammonia is a reactive gas in our atmosphere that is key in air quality issues. Assessing its emissions and how it reacts is a hot topic that can be addressed from the past. Stable isotopes (the mass of the molecule) measured in ice cores (glacial archives) can teach us a lot. However, the concentrations in ice cores are very small. We propose a protocol to limit the contamination and apply it to one ice core drilled in Mont Blanc, describing the opportunities our method brings.
Petro Uruci, Dontavious Sippial, Anthoula Drosatou, and Spyros N. Pandis
Atmos. Meas. Tech., 16, 3155–3172, https://doi.org/10.5194/amt-16-3155-2023, https://doi.org/10.5194/amt-16-3155-2023, 2023
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In this work we develop an algorithm for the synthesis of the measurements performed in atmospheric simulation chambers regarding the formation of secondary organic aerosol (SOA). Novel features of the algorithm are its ability to use measurements of SOA yields, thermodenuders, and isothermal dilution; its estimation of parameters that can be used directly in atmospheric chemical transport models; and finally its estimates of the uncertainty in SOA formation yields.
Jing Cai, Kaspar R. Daellenbach, Cheng Wu, Yan Zheng, Feixue Zheng, Wei Du, Sophie L. Haslett, Qi Chen, Markku Kulmala, and Claudia Mohr
Atmos. Meas. Tech., 16, 1147–1165, https://doi.org/10.5194/amt-16-1147-2023, https://doi.org/10.5194/amt-16-1147-2023, 2023
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We introduce the offline application of FIGAERO-CIMS by analyzing Teflon and quartz filter samples that were collected at a typical urban site in Beijing with the deposition time varying from 30 min to 24 h. This method provides a feasible, simple, and quantitative way to investigate the molecular composition and volatility of OA compounds by using FIGAERO-CIMS to analyze offline samples.
Markus Thoma, Franziska Bachmeier, Felix Leonard Gottwald, Mario Simon, and Alexander Lucas Vogel
Atmos. Meas. Tech., 15, 7137–7154, https://doi.org/10.5194/amt-15-7137-2022, https://doi.org/10.5194/amt-15-7137-2022, 2022
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We introduce the aerosolomics database and apply it to particulate matter samples. Nine VOCs were oxidized under various conditions in an oxidation flow reactor, and the formed SOA was measured using liquid chromatography mass spectrometry. With the database, an unambiguous top-down attribution of atmospheric oxidation products to their parent VOCs is now possible. Combining the database with hierarchical clustering enables a better understanding of sources, formation, and partitioning of SOA.
William D. Fahy, Cosma Rohilla Shalizi, and Ryan Christopher Sullivan
Atmos. Meas. Tech., 15, 6819–6836, https://doi.org/10.5194/amt-15-6819-2022, https://doi.org/10.5194/amt-15-6819-2022, 2022
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Heterogeneous ice nucleation (IN) alters cloud microphysics and climate, and droplet freezing assays are widely used to determine a material's IN ability. Existing statistical procedures require restrictive assumptions that may bias reported results, and there is no rigorous way to compare IN spectra. To improve the accuracy of reported IN data, we present a method for calculating statistics and confidence bands and testing statistical differences between IN activities in different materials.
Daniela Kau, Marion Greilinger, Bernadette Kirchsteiger, Aron Göndör, Christopher Herzig, Andreas Limbeck, Elisabeth Eitenberger, and Anne Kasper-Giebl
Atmos. Meas. Tech., 15, 5207–5217, https://doi.org/10.5194/amt-15-5207-2022, https://doi.org/10.5194/amt-15-5207-2022, 2022
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The use of thermal–optical analysis for the determination of elemental carbon (EC) and organic carbon (OC) can be biased by mineral dust (MD). We present a method that utilizes this interference to quantify iron contained in MD in snow samples. Possibilities and limitations of applying this method to particulate matter samples are presented. The influence of light-absorbing iron compounds in MD on the transmittance signal can be used to identify samples experiencing a bias of the OC / EC split.
Michael S. Taylor Jr., Devon N. Higgins, and Murray V. Johnston
Atmos. Meas. Tech., 15, 4663–4674, https://doi.org/10.5194/amt-15-4663-2022, https://doi.org/10.5194/amt-15-4663-2022, 2022
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This modelling study investigates the complex growth kinetics of ultrafine particles in a flow tube reactor. When both surface- and volume-limited growth processes occur, the particle diameter growth rate changes as a function of time in the flow tube. We show that this growth can be represented by a parameter (growth factor, GF) which can be obtained experimentally from the outlet-minus-inlet particle diameter change without foreknowledge of the chemical growth processes involved.
Junteng Wu, Nicolas Brun, Juan Miguel González-Sánchez, Badr R'Mili, Brice Temime Roussel, Sylvain Ravier, Jean-Louis Clément, and Anne Monod
Atmos. Meas. Tech., 15, 3859–3874, https://doi.org/10.5194/amt-15-3859-2022, https://doi.org/10.5194/amt-15-3859-2022, 2022
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This work quantified and tentatively identified the organic impurities on ammonium sulfate aerosols generated in the laboratory. They are likely low volatile and high mass molecules containing oxygen, nitrogen, and/or sulfur. Our results show that these organic impurities likely originate from the commercial AS crystals. It is recommended to use AS seeds with caution, especially when small particles are used, in terms of AS purity and water purity when aqueous solutions are used for atomization.
Mohammad R. Sadrian, Wendy M. Calvin, and John McCormack
Atmos. Meas. Tech., 15, 3053–3074, https://doi.org/10.5194/amt-15-3053-2022, https://doi.org/10.5194/amt-15-3053-2022, 2022
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Mineral dust particles originate from surface soils, primarily in arid regions. They can stay suspended in the atmosphere, impacting Earth's radiation budget. Dust particles will have different perturbation effects depending on their composition. We obtained compositional information on dust collected in an urban setting using two different techniques. We recommended using the combination of measurements to determine the variability in dust mineral abundances.
Amir Yazdani, Nikunj Dudani, Satoshi Takahama, Amelie Bertrand, André S. H. Prévôt, Imad El Haddad, and Ann M. Dillner
Atmos. Meas. Tech., 15, 2857–2874, https://doi.org/10.5194/amt-15-2857-2022, https://doi.org/10.5194/amt-15-2857-2022, 2022
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While the aerosol mass spectrometer provides high-time-resolution characterization of the overall extent of oxidation, the extensive fragmentation of molecules and specificity of the technique have posed challenges toward deeper understanding of molecular structures in aerosols. This work demonstrates how functional group information can be extracted from a suite of commonly measured mass fragments using collocated infrared spectroscopy measurements.
Boris Vansevenant, Cédric Louis, Corinne Ferronato, Ludovic Fine, Patrick Tassel, Pascal Perret, Evangelia Kostenidou, Brice Temime-Roussel, Barbara D'Anna, Karine Sartelet, Véronique Cerezo, and Yao Liu
Atmos. Meas. Tech., 14, 7627–7655, https://doi.org/10.5194/amt-14-7627-2021, https://doi.org/10.5194/amt-14-7627-2021, 2021
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A new method was developed to correct wall losses of particles on Teflon walls using a new environmental chamber. It was applied to experiments with six diesel vehicles (Euro 3 to 6), tested on a chassis dynamometer. Emissions of particles and precursors were obtained under urban and motorway conditions. The chamber experiments help understand the role of physical processes in diesel particle evolutions in the dark. These results can be applied to situations such as tunnels or winter rush hours.
Chenyang Bi, Jordan E. Krechmer, Graham O. Frazier, Wen Xu, Andrew T. Lambe, Megan S. Claflin, Brian M. Lerner, John T. Jayne, Douglas R. Worsnop, Manjula R. Canagaratna, and Gabriel Isaacman-VanWertz
Atmos. Meas. Tech., 14, 6835–6850, https://doi.org/10.5194/amt-14-6835-2021, https://doi.org/10.5194/amt-14-6835-2021, 2021
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Iodide-adduct chemical ionization mass spectrometry (I-CIMS) has been widely used to analyze airborne organics. In this study, I-CIMS sensitivities of isomers within a formula are found to generally vary by 1 and up to 2 orders of magnitude. Comparisons between measured and predicted moles, obtained using a voltage-scanning calibration approach, show that predictions for individual compounds or formulas might carry high uncertainty, yet the summed moles of analytes agree reasonably well.
Dimitrios Bousiotis, Ajit Singh, Molly Haugen, David C. S. Beddows, Sebastián Diez, Killian L. Murphy, Pete M. Edwards, Adam Boies, Roy M. Harrison, and Francis D. Pope
Atmos. Meas. Tech., 14, 4139–4155, https://doi.org/10.5194/amt-14-4139-2021, https://doi.org/10.5194/amt-14-4139-2021, 2021
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Measurement and source apportionment of atmospheric pollutants are crucial for the assessment of air quality and the implementation of policies for their improvement. This study highlights the current capability of low-cost sensors in source identification and differentiation using clustering approaches. Future directions towards particulate matter source apportionment using low-cost OPCs are highlighted.
Robert Wagner, Baptiste Testa, Michael Höpfner, Alexei Kiselev, Ottmar Möhler, Harald Saathoff, Jörn Ungermann, and Thomas Leisner
Atmos. Meas. Tech., 14, 1977–1991, https://doi.org/10.5194/amt-14-1977-2021, https://doi.org/10.5194/amt-14-1977-2021, 2021
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During the Asian summer monsoon period, air pollutants are transported from layers near the ground to high altitudes of 13 to 18 km in the atmosphere. Infrared measurements have shown that particles composed of solid ammonium nitrate are a major part of these pollutants. To enable the quantitative analysis of the infrared spectra, we have determined for the first time accurate optical constants of ammonium nitrate for the low-temperature conditions of the upper atmosphere.
David H. Hagan and Jesse H. Kroll
Atmos. Meas. Tech., 13, 6343–6355, https://doi.org/10.5194/amt-13-6343-2020, https://doi.org/10.5194/amt-13-6343-2020, 2020
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Assessing the error of low-cost particulate matter (PM) sensors has been difficult as each empirical study presents unique limitations. Here, we present a new, open-sourced, physics-based model (opcsim) and use it to understand how the properties of different particle sensors alter their accuracy. We offer a summary of likely sources of error for different sensor types, environmental conditions, and particle classes and offer recommendations for the choice of optimal calibrant.
Sini Isokääntä, Eetu Kari, Angela Buchholz, Liqing Hao, Siegfried Schobesberger, Annele Virtanen, and Santtu Mikkonen
Atmos. Meas. Tech., 13, 2995–3022, https://doi.org/10.5194/amt-13-2995-2020, https://doi.org/10.5194/amt-13-2995-2020, 2020
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Online mass spectrometry produces large amounts of data. These data can be interpreted with statistical methods, enabling scientists to more easily understand the underlying processes. We compared these techniques on car exhaust measurements. We show differences and similarities between the methods and give recommendations on applicability of the methods on certain types of data. We show that applying multiple methods leads to more robust results, thus increasing reliability of the findings.
Hanyang Li, Gavin R. McMeeking, and Andrew A. May
Atmos. Meas. Tech., 13, 2865–2886, https://doi.org/10.5194/amt-13-2865-2020, https://doi.org/10.5194/amt-13-2865-2020, 2020
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We present a new correction algorithm that addresses biases in measurements of aerosol light absorption by filter-based photometers, incorporating the transmission of light through the filter and some aerosol optical properties. It was developed using biomass burning aerosols and tested using rural ambient aerosols. This new algorithm is applicable to any filter-based photometer, resulting in good agreement between different colocated instruments in both the laboratory and the field.
Linh Dan Ngo, Dumitru Duca, Yvain Carpentier, Jennifer A. Noble, Raouf Ikhenazene, Marin Vojkovic, Cornelia Irimiea, Ismael K. Ortega, Guillaume Lefevre, Jérôme Yon, Alessandro Faccinetto, Eric Therssen, Michael Ziskind, Bertrand Chazallon, Claire Pirim, and Cristian Focsa
Atmos. Meas. Tech., 13, 951–967, https://doi.org/10.5194/amt-13-951-2020, https://doi.org/10.5194/amt-13-951-2020, 2020
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The partitioning of noxious chemical compounds between the particulate and gas phases in combustion emissions is key to delineate their exact impacts on atmospheric chemistry and human health. We developed a two-filter sampling system, a multi-technique analytical approach, and advanced statistical methods to fully characterize the composition of both phases in combustion emissions. We could successfully discriminate samples from a standard soot generator by their volatile–non-volatile species.
Diep Vu, Shaokai Gao, Tyler Berte, Mary Kacarab, Qi Yao, Kambiz Vafai, and Akua Asa-Awuku
Atmos. Meas. Tech., 12, 4277–4289, https://doi.org/10.5194/amt-12-4277-2019, https://doi.org/10.5194/amt-12-4277-2019, 2019
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Aerosol–cloud interactions contribute the greatest uncertainty to cloud formation. Aerosol composition is complex and can change quickly in the atmosphere. In this work, we recreate a transition in aerosol mixing state in the laboratory, which (to date) has only been observed in the ambient state. We then report the subsequent changes on cloud condensation nuclei (CCN) activation.
Kara D. Lamb
Atmos. Meas. Tech., 12, 3885–3906, https://doi.org/10.5194/amt-12-3885-2019, https://doi.org/10.5194/amt-12-3885-2019, 2019
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Recent atmospheric observations have indicated emissions of iron-oxide-containing aerosols from anthropogenic sources could be 8x higher than previous estimates, leading models to underestimate their climate impact. Previous studies have shown the single particle soot photometer (SP2) can quantify the atmospheric abundance of these aerosols. Here, I explore a machine learning approach to improve SP2 detection, significantly reducing misclassifications of other aerosols as iron oxide aerosols.
Gang Zhao, Weilun Zhao, and Chunsheng Zhao
Atmos. Meas. Tech., 12, 3541–3550, https://doi.org/10.5194/amt-12-3541-2019, https://doi.org/10.5194/amt-12-3541-2019, 2019
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A new method is proposed to retrieve the size-resolved real part of the refractive index (RRI). The main principle of deriving the RRI is measuring the scattering intensity by a single-particle soot photometer of a size-selected aerosol. This method is validated by a series of calibration experiments using the components of the known RI. The retrieved size-resolved RRI covers a wide range, from 200 nm to 450 nm, with uncertainty of less than 0.02.
Matthew Fraund, Tim Park, Lin Yao, Daniel Bonanno, Don Q. Pham, and Ryan C. Moffet
Atmos. Meas. Tech., 12, 1619–1633, https://doi.org/10.5194/amt-12-1619-2019, https://doi.org/10.5194/amt-12-1619-2019, 2019
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Scanning transmission X-ray microscopy (STXM) is a powerful tool which is able to determine the elemental and functional composition of aerosols on a subparticle level. The current work validates the use of STXM for quantitatively calculating the organic volume fraction of individual aerosols by applying the calculation to lab-prepared samples. The caveats and limitations for this calculation are shown as well.
Gabor Vali
Atmos. Meas. Tech., 12, 1219–1231, https://doi.org/10.5194/amt-12-1219-2019, https://doi.org/10.5194/amt-12-1219-2019, 2019
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The abundance of freezing nuclei in water samples is routinely determined by experiments involving the cooling of sample drops and observing the temperatures at which the drops freeze. This is used for characterizing the nucleating abilities of materials in laboratory preparations or to determine the numbers of nucleating particles in rain, snow, river water or other natural waters. The evaluation of drop-freezing experiments in terms of differential nucleus spectra is advocated in the paper.
Ningxin Wang, Spiro D. Jorga, Jeffery R. Pierce, Neil M. Donahue, and Spyros N. Pandis
Atmos. Meas. Tech., 11, 6577–6588, https://doi.org/10.5194/amt-11-6577-2018, https://doi.org/10.5194/amt-11-6577-2018, 2018
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The interaction of particles with the chamber walls has been a significant source of uncertainty when analyzing results of secondary organic aerosol formation experiments performed in Teflon chambers. We evaluated the performance of several particle wall-loss correction methods for aging experiments of α-pinene ozonolysis products. Experimental procedures are proposed for the characterization of particle losses during different stages of these experiments.
Maciej Leśkiewicz, Miron Kaliszewski, Maksymilian Włodarski, Jarosław Młyńczak, Zygmunt Mierczyk, and Krzysztof Kopczyński
Atmos. Meas. Tech., 11, 6259–6270, https://doi.org/10.5194/amt-11-6259-2018, https://doi.org/10.5194/amt-11-6259-2018, 2018
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In this study we demonstrate the application of artificial neural networks to the real-time analysis of single-particle fluorescence fingerprints acquired using BARDet (a BioAeRosol Detector). 48 different aerosols including pollens, bacteria, fungi, spores and nonbiological substances were characterized. An entirely new approach to data analysis using a decision tree comprising 22 independent neural networks was discussed. A very high accuracy of aerosol classification in real time resulted.
Costa D. Christopoulos, Sarvesh Garimella, Maria A. Zawadowicz, Ottmar Möhler, and Daniel J. Cziczo
Atmos. Meas. Tech., 11, 5687–5699, https://doi.org/10.5194/amt-11-5687-2018, https://doi.org/10.5194/amt-11-5687-2018, 2018
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Compositional analysis of atmospheric and laboratory aerosols is often conducted with mass spectrometry. In this study, machine learning is used to automatically differentiate particles on the basis of chemistry and size. The ability of the machine learning algorithm was then tested on a data set for which the particles were not initially known to judge its ability.
Nicole J. Savage and J. Alex Huffman
Atmos. Meas. Tech., 11, 4929–4942, https://doi.org/10.5194/amt-11-4929-2018, https://doi.org/10.5194/amt-11-4929-2018, 2018
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We show the systematic application of hierarchical agglomerative clustering (HAC) to comprehensive bioaerosol and non-bioaerosol laboratory data collected with the wideband integrated bioaerosol sensor (WIBS-4A). This study investigated various input conditions and used individual matchups and computational mixtures of particles; it will help improve clustering results applied to data from the ultraviolet laser and light-induced fluorescence instruments commonly used for bioaerosol research.
Jake Zenker, Kristen N. Collier, Guanglang Xu, Ping Yang, Ezra J. T. Levin, Kaitlyn J. Suski, Paul J. DeMott, and Sarah D. Brooks
Atmos. Meas. Tech., 10, 4639–4657, https://doi.org/10.5194/amt-10-4639-2017, https://doi.org/10.5194/amt-10-4639-2017, 2017
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We have developed a new method which employs single particle depolarization to determine ice nucleating particle (INP) concentrations and to differentiate between ice crystals, water droplets, and aerosols. The method is used to interpret measurements collected using the Texas A&M Continuous Flow Diffusion Chamber (TAMU CFDC) coupled to a Cloud and Aerosol Spectrometer with Polarization (CASPOL). This new method extends the range of operating conditions for the CFDC to higher supersaturations.
Matthew Osman, Maria A. Zawadowicz, Sarah B. Das, and Daniel J. Cziczo
Atmos. Meas. Tech., 10, 4459–4477, https://doi.org/10.5194/amt-10-4459-2017, https://doi.org/10.5194/amt-10-4459-2017, 2017
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This study presents the first-time attempt at using time-of-flight single particle mass spectrometry (SPMS) as an emerging online technique for measuring insoluble particles in glacial snow and ice. Using samples from two Greenlandic ice cores, we show that SPMS can constrain the aerodynamic size, composition, and relative abundance of most particulate types on a per-particle basis, reducing the preparation time and resources required of conventional, filter-based particle retrieval methods.
Simon Ruske, David O. Topping, Virginia E. Foot, Paul H. Kaye, Warren R. Stanley, Ian Crawford, Andrew P. Morse, and Martin W. Gallagher
Atmos. Meas. Tech., 10, 695–708, https://doi.org/10.5194/amt-10-695-2017, https://doi.org/10.5194/amt-10-695-2017, 2017
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Particles such as bacteria, pollen and fungal spores have important implications within the environment and public health sectors. Here we evaluate the performance of various different methods for distinguishing between these different types of particles using a new instrument. We demonstrate that there may be better alternatives to the currently used methods which can be further investigated in future research.
Yan Lyu, Tingting Xu, Xiang Li, Tiantao Cheng, Xin Yang, Xiaomin Sun, and Jianmin Chen
Atmos. Meas. Tech., 9, 1025–1037, https://doi.org/10.5194/amt-9-1025-2016, https://doi.org/10.5194/amt-9-1025-2016, 2016
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This study presents the particle size distribution of PBDEs in the atmosphere of a megacity and evaluates the contribution of size-fractionated PBDEs' deposition in the human respiratory tract.
Matteo Reggente, Ann M. Dillner, and Satoshi Takahama
Atmos. Meas. Tech., 9, 441–454, https://doi.org/10.5194/amt-9-441-2016, https://doi.org/10.5194/amt-9-441-2016, 2016
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Organic carbon and elemental carbon are major components of atmospheric PM. Typically they are measured using destructive and relatively expensive methods (e.g., TOR). We aim to reduce the operating costs of large air quality monitoring networks using FT-IR spectra of ambient PTFE filters and PLS regression. We achieve accurate predictions for models (calibrated in 2011) that use samples collected at the same or different sites of the calibration data set and in a different year (2013).
S. S. Steimer, U. K. Krieger, Y.-F. Te, D. M. Lienhard, A. J. Huisman, B. P. Luo, M. Ammann, and T. Peter
Atmos. Meas. Tech., 8, 2397–2408, https://doi.org/10.5194/amt-8-2397-2015, https://doi.org/10.5194/amt-8-2397-2015, 2015
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Atmospheric aerosol is often subject to supersaturated or supercooled conditions where bulk measurements are not possible. Here we demonstrate how measurements using single particle electrodynamic levitation combined with light scattering spectroscopy allow the retrieval of thermodynamic data, optical properties and water diffusivity of such metastable particles even when auxiliary bulk data are not available due to lack of sufficient amounts of sample.
N. Utry, T. Ajtai, M. Pintér, E. Tombácz, E. Illés, Z. Bozóki, and G. Szabó
Atmos. Meas. Tech., 8, 401–410, https://doi.org/10.5194/amt-8-401-2015, https://doi.org/10.5194/amt-8-401-2015, 2015
A. Quérel, P. Lemaitre, M. Monier, E. Porcheron, A. I. Flossmann, and M. Hervo
Atmos. Meas. Tech., 7, 1321–1330, https://doi.org/10.5194/amt-7-1321-2014, https://doi.org/10.5194/amt-7-1321-2014, 2014
F. Freutel, F. Drewnick, J. Schneider, T. Klimach, and S. Borrmann
Atmos. Meas. Tech., 6, 3131–3145, https://doi.org/10.5194/amt-6-3131-2013, https://doi.org/10.5194/amt-6-3131-2013, 2013
E. Fuentes and G. McFiggans
Atmos. Meas. Tech., 5, 735–757, https://doi.org/10.5194/amt-5-735-2012, https://doi.org/10.5194/amt-5-735-2012, 2012
C. D. Cappa
Atmos. Meas. Tech., 3, 579–592, https://doi.org/10.5194/amt-3-579-2010, https://doi.org/10.5194/amt-3-579-2010, 2010
Cited articles
Breiman, L.: Bagging predictors, Machine Learning, 24, 123–140, 1996. a
Breiman, L.: Random forests, Machine Learning, 45, 5–32, 2001. a
Carrera, M., Zandomeni, R., Fitzgibbon, J., and Sagripanti, J.-L.: Difference
between the spore sizes of Bacillus anthracis and other Bacillus species,
J. Appl. Microbiol., 102, 303–312, 2007. a
Crawford, I., Bower, K. N., Choularton, T. W., Dearden, C., Crosier, J., Westbrook, C.,
Capes, G., Coe, H., Connolly, P. J., Dorsey, J. R., Gallagher, M. W., Williams, P.,
Trembath, J., Cui, Z., and Blyth, A.: Ice formation and development in aged,
wintertime cumulus over the UK: observations and modelling, Atmos. Chem. Phys., 12, 4963–4985, https://doi.org/10.5194/acp-12-4963-2012, 2012. a
Crawford, I., Gallagher, M. W., Bower, K. N., Choularton, T. W., Flynn, M. J., Ruske, S.,
Listowski, C., Brough, N., Lachlan-Cope, T., Fleming, Z. L., Foot, V. E.,
and Stanley, W. R.: Real-time detection of airborne fluorescent bioparticles
in Antarctica, Atmos. Chem. Phys., 17, 14291–14307, https://doi.org/10.5194/acp-17-14291-2017, 2017. a
Crotzer, V. and Levetin, E.: The aerobiological significance of smut spores in
Tulsa, Oklahoma, Aerobiologia, 12, 177–184, 1996. a
Cziczo, D. J., Froyd, K. D., Hoose, C., Jensen, E. J., Diao, M., Zondlo, M. A.,
Smith, J. B., Twohy, C. H., and Murphy, D. M.: Clarifying the dominant
sources and mechanisms of cirrus cloud formation, Science, 340, 1320–1324,
2013. a
D'Amato, G., Liccardi, G., D'amato, M., and Cazzola, M.: The role of outdoor
air pollution and climatic changes on the rising trends in respiratory
allergy, Resp. Med., 95, 606–611, 2001. a
Després, V. R., Huffman, J. A., Burrows, S. M., Hoose, C., Safatov,
A. S., Buryak, G. A., Fröhlich-Nowoisky, J., Elbert, W., Andreae,
M. O., Pöschl, U., and Jaenicke, R.: Primary Biological
Aerosol Particles in the Atmosphere: A Review, Tellus B, 64,
15598, https://doi.org/10.3402/tellusb.v64i0.15598, 2012. a, b
Freund, Y. and Schapire, R. E.: A decision-theoretic generalization of on-line
learning and an application to boosting, J. Comput. Syst.
Sci., 55, 119–139, 1997. a
Friedman, J., Hastie, T., and Tibshirani, R.: The elements of statistical
learning, vol. 1, Springer series in statistics New York, NY, USA, 2001. a
Friedman, J. H.: Greedy function approximation: a gradient boosting machine,
Ann. Stat., 29, 1189–1232, 2001. a
Fumanal, B., Chauvel, B., and Bretagnolle, F.: Estimation of pollen and seed
production of common ragweed in France, Ann. Agr.
Env. Med., 14, 233–236, 2007. a
Gabey, A. M., Gallagher, M. W., Whitehead, J., Dorsey, J. R., Kaye, P. H., and Stanley, W. R.:
Measurements and comparison of primary biological aerosol above and below
a tropical forest canopy using a dual channel fluorescence
spectrometer, Atmos. Chem. Phys., 10, 4453–4466, https://doi.org/10.5194/acp-10-4453-2010, 2010. a, b
Gabey, A. M., Stanley, W. R., Gallagher, M. W., and Kaye, P. H.:
The fluorescence properties of aerosol larger than 0.8 µm in urban and
tropical rainforest locations, Atmos. Chem. Phys., 11, 5491–5504, https://doi.org/10.5194/acp-11-5491-2011, 2011. a
Gabey, A. M., Gallagher, M. W., Whitehead, J., Dorsey, J. R., Kaye, P. H., and Stanley, W. R.:
Measurements and comparison of primary biological aerosol above and
below a tropical forest canopy using a dual channel fluorescence
spectrometer, Atmos. Chem. Phys., 10, 4453–4466, https://doi.org/10.5194/acp-10-4453-2010, 2010. a
Geiser, M., Leupin, N., Maye, I., Im Hof, V., and Gehr, P.: Interaction of
fungal spores with the lungs: distribution and retention of inhaled puffball
(Calvatia excipuliformis) spores, J. Allergy Clin. Immun.,
106, 92–100, 2000. a
Gurian-Sherman, D. and Lindow, S. E.: Bacterial ice nucleation: significance
and molecular basis., The FASEB journal, 7, 1338–1343, 1993. a
Hader, J. D., Wright, T. P., and Petters, M. D.: Contribution of pollen to
atmospheric ice nuclei concentrations, Atmos. Chem. Phys., 14, 5433–5449, https://doi.org/10.5194/acp-14-5433-2014, 2014. a
Healy, D. A., O'Connor, D. J., and Sodeau, J. R.: Measurement of the particle
counting efficiency of the “Waveband Integrated Bioaerosol Sensor” model
number 4 (WIBS-4), J. Aerosol Sci., 47, 94–99,
2012b. a
Hernandez, M., Perring, A. E., McCabe, K., Kok, G., Granger, G., and Baumgardner, D.:
Chamber catalogues of optical and fluorescent signatures distinguish bioaerosol
classes, Atmos. Meas. Tech., 9, 3283–3292, https://doi.org/10.5194/amt-9-3283-2016, 2016. a, b, c, d
Hoose, C. and Möhler, O.: Heterogeneous ice nucleation on atmospheric aerosols:
a review of results from laboratory experiments, Atmos. Chem. Phys., 12, 9817–9854, https://doi.org/10.5194/acp-12-9817-2012, 2012. a
Hubert, L. and Arabie, P.: Comparing partitions, J. Classif., 2,
193–218, 1985. a
Kang, D.-Y., Son, M.-S., Eum, C.-H., Kim, W.-S., and Lee, S.-H.: Size
determination of pollens using gravitational and sedimentation field-flow
fractionation, B. Kor. Chem. Soc., 28, 613–618, 2007. a
Kennedy, R. and Smith, M.: Effects of aeroallergens on human
health under climate change, in: Health Effects of Climate
Change in the UK 2012, edited by: Vardoulakis, S. and Heaviside,
C., 83–96, 2012. a
Khan, K., Rehman, S. U., Aziz, K., Fong, S., and Sarasvady, S.: DBSCAN: Past,
present and future, in: Applications of Digital Information and Web
Technologies (ICADIWT), 2014 Fifth International Conference on the IEEE,
232–238, 2014. a
Mäkelä, E. M.: Size distinctions between Betula pollen types – a
review, Grana, 35, 248–256, 1996. a
Milligan, G. W. and Cooper, M. C.: An examination of procedures for determining
the number of clusters in a data set, Psychometrika, 50, 159–179, 1985. a
Milligan, G. W. and Cooper, M. C.: A study of standardization of variables in
cluster analysis, J. Classif., 5, 181–204, 1988. a
Möhler, O., DeMott, P. J., Vali, G., and Levin, Z.: Microbiology and atmospheric
processes: the role of biological particles in cloud physics, Biogeosciences, 4, 1059–1071, https://doi.org/10.5194/bg-4-1059-2007, 2007. a
Müllner, D.: Modern hierarchical, agglomerative clustering algorithms,
arXiv preprint arXiv:1109.2378, 2011. a
Nasir, Z., Rolph, C., Collins, S., Stevenson, D., Gladding, T., Hayes, E.,
Williams, B., Khera, S., Jackson, S., Bennett, A., Parks, S.,
Kinnersley, R. P.,
Walsh, K.,
Pollard, S. J. T.,
Drew, G.,
Garcia-Alcega, S.,
Coulon, F., and
Tyrrel, S.: A Controlled Study
on the Characterisation of Bioaerosols Emissions from Compost, Atmosphere, 9,
379, https://doi.org/10.3390/atmos9100379, 2018. a
Pedregosa, F., Varoquaux, G., Gramfort, A., Michel, V., Thirion, B., Grisel,
O., Blondel, M., Prettenhofer, P., Weiss, R., Dubourg, V., Vanderplas, J.,
Passos, A., Cournapeau, D., Brucher, M., Perrot, M., and Duchesnay, E.:
Scikit-learn: Machine Learning in Python, J. Mach. Learn.
Res., 12, 2825–2830, 2011. a, b
Pierucci, O.: Dimensions of Escherichia coli at various growth rates: model for
envelope growth, J. Bacteriol., 135, 559–574, 1978. a
Pinnick, R. G., Hill, S. C., Nachman, P., Pendleton, J. D., Fernandez, G. L.,
Mayo, M. W., and Bruno, J. G.: Fluorescence particle counter for detecting
airborne bacteria and other biological particles, Aerosol Sci.
Tech., 23, 653–664, 1995. a
Pöhlker, C., Huffman, J. A., and Pöschl, U.: Autofluorescence of atmospheric
bioaerosols – fluorescent biomolecules and potential interferences, Atmos. Meas. Tech., 5, 37–71, https://doi.org/10.5194/amt-5-37-2012, 2012. a
Pöhlker, C., Huffman, J. A., Förster, J.-D., and Pöschl, U.: Autofluorescence
of atmospheric bioaerosols: spectral fingerprints and taxonomic
trends of pollen, Atmos. Meas. Tech., 6, 3369–3392, https://doi.org/10.5194/amt-6-3369-2013, 2013. a
Robinson, N. H., Allan, J. D., Huffman, J. A., Kaye, P. H., Foot, V. E., and
Gallagher, M.: Cluster analysis of WIBS single-particle bioaerosol
data, Atmos. Meas. Tech., 6, 337–347, https://doi.org/10.5194/amt-6-337-2013, 2013. a, b
Ruske, S.: simonruske/UVLIF: Pre-release of software (Version 0.0.1), Zenodo, https://doi.org/10.5281/zenodo.1478098,
5 November 2018a.
Ruske, S.: simonruske/AMT-2018-126: Code release upon acceptance (Version 1.0.0), Zenodo, https://doi.org/10.5281/zenodo.1478082,
5 November 2018b.
Ruske, S., Topping, D. O., Foot, V. E., Kaye, P. H., Stanley, W. R., Crawford, I.,
Morse, A. P., and Gallagher, M. W.: Evaluation of machine learning algorithms
for classification of primary biological aerosol using a new UV-LIF
spectrometer, Atmos. Meas. Tech., 10, 695–708, https://doi.org/10.5194/amt-10-695-2017, 2017. a, b, c, d
Savage, N. J. and Huffman, J. A.: Evaluation of a hierarchical agglomerative
clustering method applied to WIBS laboratory data for improved discrimination
of biological particles by comparing data preparation
techniques, Atmos. Meas. Tech., 11, 4929–4942, https://doi.org/10.5194/amt-11-4929-2018, 2018. a
Savage, N. J., Krentz, C. E., Könemann, T., Han, T. T., Mainelis, G., Pöhlker, C.,
and Huffman, J. A.: Systematic characterization and fluorescence threshold strategies
for the wideband integrated bioaerosol sensor (WIBS) using size-resolved biological
and interfering particles, Atmos. Meas. Tech., 10, 4279–4302, https://doi.org/10.5194/amt-10-4279-2017, 2017. a, b, c, d, e, f
Schubert, E., Koos, A., Emrich, T., Züfle, A., Schmid, K. A., and Zimek,
A.: A Framework for Clustering Uncertain Data, Proceedings of the VLDB Endowment, 8, 1976–1979,
available at: http://www.vldb.org/pvldb/vol8/p1976-schubert.pdf (last access: 20 February 2018), 2015. a
Ting, K. M.: Confusion Matrix, pp. 209–209, Springer US, Boston, MA,
https://doi.org/10.1007/978-0-387-30164-8_157, 2010. a
Vinh, N. X., Epps, J., and Bailey, J.: Information theoretic measures for
clusterings comparison: Variants, properties, normalization and correction
for chance, J. Mach. Learn. Res., 11, 2837–2854, 2010. a
Short summary
Pollen, bacteria and fungal spores are common in the environment, can have very important implications for public health and may influence the weather. Biological sensors potentially could be used to monitor quantities of these types of particles. However, it is important to transform the measurements from these instruments into counts of these biological particles. The paper tests a variety of approaches for achieving this aim on data collected in a laboratory.
Pollen, bacteria and fungal spores are common in the environment, can have very important...
